Pregenerated sensors for HPGDS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029919Ensembl transcript IDs: ENSMUST00000031982.5
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCCGGACTGCCCATCTGCCTCCCGTCTTGCCCATGTCACCACTaGCTTGGGCAGCTTCTCATCCTCTTCTTTTGCATAGTTGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: LPGLPICLPSCPCHH*LGQLLILFFCIVGA Trigger: GGCTCCAACTATGCAAAAGAAGAGGATGAGAAGCTGCCCAAGCCAGTGGTGACATGGGCAAGACGGGAGGCAGATGGGCAGTCCGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | AATAGGGATCCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTaGAGTGCCAGCTTGGGCCTGGGCCACATTGTGCATCCCAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: NRDPGSAAWKRDYSE*SASLGLGHIVHPSQ Trigger: CTGACTGGGATGCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGGATCCCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CCA 90 bp | CGGACTGCCCATCTGCCTCCCGTCTTGCCCATGTCACCACTGGCTTaGGCAGCTTCTCATCCTCTTCTTTTGCATAGTTGGAGCCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: RTAHLPPVLPMSPLA*AASHPLLLHSWSLF Trigger: AAAAAGGCTCCAACTATGCAAAAGAAGAGGATGAGAAGCTGCCCAAGCCAGTGGTGACATGGGCAAGACGGGAGGCAGATGGGCAGTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | GAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATTGTaGATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: EITVSAVPAWAWATL*IPVSLQIPSEKTVQ Trigger: TTGGACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | TGTTCTAGTCAGCACTGCTATTATAATTCCCTAGTGCCACTGTATTaGTGCCTCCTCACAGGCTCATGGCCATCTGTGTATCTTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: CSSQHCYYNSLVPLY*CLLTGSWPSVYLPA Trigger: AGCTGGAAGATACACAGATGGCCATGAGCCTGTGAGGAGGCAGCAATACAGTGGCACTAGGGAATTATAATAGCAGTGCTGACTAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CCA 90 bp | CAGCTTCTCATCCTCTTCTTTTGCATAGTTGGAGCCTTTTTGTGTTaGCTCCTTTCACTTAGCTGTGTGTGGCACTGGCTCACCCATGTA | + |
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Preference number: 1 (lower is better) Translates to: QLLILFFCIVGAFLC*LLSLSCVWHWLTHV Trigger: TACATGGGTGAGCCAGTGCCACACACAGCTAAGTGAAAGGAGCCAACACAAAAAGGCTCCAACTATGCAAAAGAAGAGGATGAGAAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | TTTCCTGCTGTCCCCACACCTACAGTCTCCTCTGTTGCTAACATGTaGTACATACGCTACAGTTTGCATGTGTTCTGCATTCTGAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: FPAVPTPTVSSVANM*YIRYSLHVFCILSK Trigger: CTTACTCAGAATGCAGAACACATGCAAACTGTAGCGTATGTAGCACATGTTAGCAACAGAGGAGACTGTAGGTGTGGGGACAGCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | GAAGATCAGATCCCATTACAGATAGTTGTGAACCACCATGTGGTTTaGTGGGAATTGAACTCAGAACCTCTGGAAGAGCAGTCAGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: EDQIPLQIVVNHHVV*WELNSEPLEEQSVL Trigger: TAGCACTGACTGCTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAAACCACATGGTGGTTCACAACTATCTGTAATGGGATCTGATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR TCA 90 bp | GGAATTGAACTCAGAACCTCTGGAAGAGCAGTCAGTGCTAATTGCTaGGCCATCTCTCCAGCCTGCTTTTGTTTTTCTCATGTGAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: GIELRTSGRAVSANC*AISPACFCFSHVKD Trigger: ATCTTTCACATGAGAAAAACAAAAGCAGGCTGGAGAGATGGCTCAGCAATTAGCACTGACTGCTCTTCCAGAGGTTCTGAGTTCAATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CCA 90 bp | TATAATTCCCTAGTGCCACTGTATTGCTGCCTCCTCACAGGCTCATaGCCATCTGTGTATCTTCCAGCTAACATTTCAATCTGGGTATTT | + |
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Preference number: 1 (lower is better) Translates to: YNSLVPLYCCLLTGS*PSVYLPANISIWVF Trigger: AAATACCCAGATTGAAATGTTAGCTGGAAGATACACAGATGGCCATGAGCCTGTGAGGAGGCAGCAATACAGTGGCACTAGGGAATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | TCCAGTGTTTATTTGGTCTTGAGATTTTACTGTTCTAGTCAGCACTaGTATTATAATTCCCTAGTGCCACTGTATTGCTGCCTCCTCACA | + |
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Preference number: 1 (lower is better) Translates to: SSVYLVLRFYCSSQH*YYNSLVPLYCCLLT Trigger: TGTGAGGAGGCAGCAATACAGTGGCACTAGGGAATTATAATAGCAGTGCTGACTAGAACAGTAAAATCTCAAGACCAAATAAACACTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | TTTCTATGTCACAGCTCCTTTCCTTGTCTCTACAGCCTTCTGAATTaGAACAATGCTGAACTCAGTAACTTTTTGTTACTCCATTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: FLCHSSFPCLYSLLN*NNAELSNFLLLHFV Trigger: CACAAAATGGAGTAACAAAAAGTTACTGAGTTCAGCATTGTTGCAATTCAGAAGGCTGTAGAGACAAGGAAAGGAGCTGTGACATAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 90 bp | TCTGTTGCTAACATGTGCTACATACGCTACAGTTTGCATGTGTTCTaGATTCTGAGTAAGTTTATAAATGTAAAGACGTGTACTCATTCT | + |
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Preference number: 1 (lower is better) Translates to: SVANMCYIRYSLHVF*ILSKFINVKTCTHS Trigger: AGAATGAGTACACGTCTTTACATTTATAAACTTACTCAGAATGCAGAACACATGCAAACTGTAGCGTATGTAGCACATGTTAGCAACAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | CATCCCACAGAACAGACTGCCCGGACTGCCCATCTGCCTCCCGTCTaGCCCATGTCACCACTGGCTTGGGCAGCTTCTCATCCTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: HPTEQTARTAHLPPV*PMSPLAWAASHPLL Trigger: AAGAAGAGGATGAGAAGCTGCCCAAGCCAGTGGTGACATGGGCAAGACGGGAGGCAGATGGGCAGTCCGGGCAGTCTGTTCTGTGGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCGTGCCACTGTATTGCTaGCTCCTCACAGGCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: PGSAAWKRDYSECSASLGVPLYC*LLTGSW Trigger: CCATGAGCCTGTGAGGAGGCAGCAATACAGTGGCAC...GCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | GGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATTGTGCCTCAGTGCCATCTTTTaGATTCCTGTCCCCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GNEITVSAVPAWAWATLCLSAIF*IPVPRS Trigger: GGACCTGGGGACAGGAATGCAAAAGATGGCACTGAG...GCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTTCCCAAGTGCTGGGATTAAAGGCGCGCGCCACCACCGCTCGGCTAGATGTCTCTACAGCCTTCTaGATTGCAACAATGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: SASQVLGLKARATTARLDVSTAF*IATMLN Trigger: GTTCAGCATTGTTGCAATTCAGAAGGCTGTAGAGAC...ATCTAGCCGAGCGGTGGTGGCGCGCGCCTTTAATCCCAGCACTTGGGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTTCCCAAGTGCTGGGATTAAAGGCGCGCGCCACCACCGCTCGGCTAGATCACCATGTGGTTTGCTaGGAATTGAACTCAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: SASQVLGLKARATTARLDHHVVC*ELNSEP Trigger: AGGTTCTGAGTTCAATTCCCAGCAAACCACATGGTG...ATCTAGCCGAGCGGTGGTGGCGCGCGCCTTTAATCCCAGCACTTGGGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCTCACTTAGCTGTGTGTaGCACTGGCTCACCCATGTA | + |
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Preference number: 2 (lower is better) Translates to: PGSAAWKRDYSECSASLGSLSCV*HWLTHV Trigger: TACATGGGTGAGCCAGTGCCACACACAGCTAAGTGA...GCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATTGTGCTGGTTTGCTGGGAATTaGACTCAGAACCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GNEITVSAVPAWAWATLCWFAGN*TQNLWK Trigger: CTTCCAGAGGTTCTGAGTTCAATTCCCAGCAAACCA...GCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTTTGGCGCCAAATGCCTTTATCCATGGAGCCAGCTCACTGGCCTGTTGTGTTTGTAGACCAGGCTaGCCTCGAACTCAGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: LGLAPNAFIHGASSLACCVCRPG*PRTQKS Trigger: GGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAC...ACAACAGGCCAGTGAGCTGGCTCCATGGATAAAGGCATTTGGCGCCAAACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | CTTCCATTATGTAGGTGCCAGAGACTGATCTTAGGCCTTCTGGGTTaGGCGCCAAATGCCTTTATCCATGGAGCCAGCTCACTGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LPLCRCQRLILGLLG*APNAFIHGASSLAC Trigger: ACAGGCCAGTGAGCTGGCTCCATGGATAAAGGCATTTGGCGCCAAACCCAGAAGGCCTAAGATCAGTCTCTGGCACCTACATAATGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | AACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATaGTGCATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTC | + |
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Preference number: 2 (lower is better) Translates to: NEITVSAVPAWAWAT*CIPVSLQIPSEKTV Trigger: GACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCGCCATCTCTCCAGCCTaGTTTTGTTTTTCTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: PGSAAWKRDYSECSASLGAISPA*FCFSHV Trigger: CACATGAGAAAAACAAAAGCAGGCTGGAGAGATGGC...GCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGCTAGTGCCACTGTATTaGTGCCTCCTCACAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: MSISANATVLKGRAEDRQLVPLY*CLLTGS Trigger: TGAGCCTGTGAGGAGGCAGCAATACAGTGGCACTAG...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCTCTGTCTCTTGTCTCTaGGGTATCGAACTTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: PGSAAWKRDYSECSASLGSVSCL*GIELSM Trigger: CATAGAAAGTTCGATACCCCAGAGACAAGAGACAGA...GCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | CTTGGGCAGCTTCTCATCCTCTTCTTTTGCATAGTTGGAGCCTTTTaGTGTTGGCTCCTTTCACTTAGCTGTGTGTGGCACTGGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: LGQLLILFFCIVGAF*CWLLSLSCVWHWLT Trigger: GGTGAGCCAGTGCCACACACAGCTAAGTGAAAGGAGCCAACACAAAAAGGCTCCAACTATGCAAAAGAAGAGGATGAGAAGCTGCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | GAGCAGTCCCATTTCCTGCTGTCCCCACACCTACAGTCTCCTCTGTaGCTAACATGTGCTACATACGCTACAGTTTGCATGTGTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: EQSHFLLSPHLQSPL*LTCATYATVCMCSA Trigger: TGCAGAACACATGCAAACTGTAGCGTATGTAGCACATGTTAGCAACAGAGGAGACTGTAGGTGTGGGGACAGCAGGAAATGGGACTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | GGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATTGTGCTACAGCCTTCTGAATTaGAACAATGCTGAACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GNEITVSAVPAWAWATLCYSLLN*NNAELS Trigger: ACTGAGTTCAGCATTGTTGCAATTCAGAAGGCTGTA...GCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTTTGGCGCCAAATGCCTTTATCCATGGAGCCAGCTCACTGGCCTGTTGTCTCATCCTCTTCTTTTaGATAGTTGGAGCCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LGLAPNAFIHGASSLACCLILFF*IVGAFL Trigger: CAAAAAGGCTCCAACTATGCAAAAGAAGAGGATGAG...ACAACAGGCCAGTGAGCTGGCTCCATGGATAAAGGCATTTGGCGCCAAACCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | TTTGGCGCCAAATGCCTTTATCCATGGAGCCAGCTCACTGGCCTGTaGTTTAGAAGATTGTGTAGAGAGGTGCTTTCCACTCTGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FGAKCLYPWSQLTGL*FRRLCREVLSTLFL Trigger: GAGAAACAGAGTGGAAAGCACCTCTCTACACAATCTTCTAAACAACAGGCCAGTGAGCTGGCTCCATGGATAAAGGCATTTGGCGCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR TCA 90 bp | GCCACATTGTGCATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTCCAATGTACTCATTCTCTCTaGCAGCATCCCACAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: ATLCIPVSLQIPSEKTVQCTHSL*QHPTEQ Trigger: CTGTTCTGTGGGATGCTGTCAGAGAGAATGAGTACA...TTGGACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCAACATCACTTTTCTTaGCTGTCCTTTAATCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PGSAAWKRDYSECSASLGQHHFS*LSFNLD Trigger: ATCAAGATTAAAGGACAGCCAAGAAAAGTGATGTTG...GCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGAACCACCATGTGGTTTaGTGGGAATTGAACTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: MSISANATVLKGRAEDRQNHHVV*WELNSE Trigger: TTCTGAGTTCAATTCCCAGCAAACCACATGGTGGTT...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | GCCACATTGTGCATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTCCAAGATTGTGTAGAGAGGTaGTTTCCACTCTGTTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: ATLCIPVSLQIPSEKTVQDCVER*FPLCFS Trigger: TGAGAAACAGAGTGGAAAGCACCTCTCTACACAATC...TTGGACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR TCA 90 bp | GCCACATTGTGCATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTCCAATTTAGCAGCTGTATGTaGAGCAGCATCCAAGATATA | + |
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Preference number: 2 (lower is better) Translates to: ATLCIPVSLQIPSEKTVQFSSCM*SSIQDI Trigger: TATATCTTGGATGCTGCTTCACATACAGCTGCTAAA...TTGGACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR TCA 90 bp | GCCACATTGTGCATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTCCAAGTTTCTCAGCCACCATaGGTAAGTAAACAGTCATTT | + |
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Preference number: 2 (lower is better) Translates to: ATLCIPVSLQIPSEKTVQVSQPP*VSKQSF Trigger: AAATGACTGTTTACTTACTCATGGTGGCTGAGAAAC...TTGGACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGTGTTCTAGTCAGCACTaGTATTATAATTCCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: MSISANATVLKGRAEDRQCSSQH*YYNSLV Trigger: CACTAGGGAATTATAATAGCAGTGCTGACTAGAACA...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | GCCACATTGTGCATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTCCAATCTGTTGCTAACATGTaGTACATACGCTACAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ATLCIPVSLQIPSEKTVQSVANM*YIRYSL Trigger: CAAACTGTAGCGTATGTAGCACATGTTAGCAACAGA...TTGGACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | TTGGAAACTAAGTGCCTGCAGATAAAGACAAAACTGCAACACCCCTaGAGTTGCTATACACAGCAAGCAGAGTACTACAAAGTTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: LETKCLQIKTKLQHP*SCYTQQAEYYKVTV Trigger: GACTGTAACTTTGTAGTACTCTGCTTGCTGTGTATAGCAACTCAAGGGGTGTTGCAGTTTTGTCTTTATCTGCAGGCACTTAGTTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR CAA 90 bp | CCTACAGTCTCCTCTGTTGCTAACATGTGCTACATACGCTACAGTTaGCATGTGTTCTGCATTCTGAGTAAGTTTATAAATGTAAAGACG | + |
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Preference number: 2 (lower is better) Translates to: PTVSSVANMCYIRYS*HVFCILSKFINVKT Trigger: CGTCTTTACATTTATAAACTTACTCAGAATGCAGAACACATGCAAACTGTAGCGTATGTAGCACATGTTAGCAACAGAGGAGACTGTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCAGCATCCAAGATATATGTTCAACACCCCTTGAGTTaGTATACACAGCAAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: EVFKVLAAVCEAASKIYVQHPLS*YTQQAE Trigger: CTCTGCTTGCTGTGTATAGCAACTCAAGGGGTGTTG...AACATATATCTTGGATGCTGCTTCACATACAGCTGCTAAAACTTTAAAAACCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 72 bp | AACAGACTGCCCGGACTGCCCATCTGCCTCCCGTCTTaGCCATGTCACCACTGGCTTGGGCAGCTTCTCATC | + |
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Preference number: 3 (lower is better) Translates to: NRLPGLPICLPS*PCHHWLGQLLI Trigger: GATGAGAAGCTGCCCAAGCCAGTGGTGACATGGGCAAGACGGGAGGCAGATGGGCAGTCCGGGCAGTCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCTTCCCAAGTGCTGGGATTAAAGGCGCG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCFPSAGIKGA Trigger: CGCGCCTTTAATCCCAGCACTTGGGAAGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 72 bp | TACTCATTCTCTCTGACAGCATCCCACAGAACAGACTaGCCGGACTGCCCATCTGCCTCCCGTCTTGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: YSFSLTASHRTD*PDCPSASRLAH Trigger: ATGGGCAAGACGGGAGGCAGATGGGCAGTCCGGGCAGTCTGTTCTGTGGGATGCTGTCAGAGAGAATGAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 72 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTaGAGTGCCAGCTTGGGCCTGGGCCACATTGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: PGSAAWKRDYSE*SASLGLGHIVH Trigger: ATGCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| 3UTR GCA 72 bp | GTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATTGTaGATCCCAGTCAGCCTTCAGATACCAAGTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSAVPAWAWATL*IPVSLQIPSEK Trigger: TTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CCA 72 bp | CTGCCCATCTGCCTCCCGTCTTGCCCATGTCACCACTaGCTTGGGCAGCTTCTCATCCTCTTCTTTTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: LPICLPSCPCHH*LGQLLILFFCI Trigger: TATGCAAAAGAAGAGGATGAGAAGCTGCCCAAGCCAGTGGTGACATGGGCAAGACGGGAGGCAGATGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CCA 72 bp | GCTGTGTGTGGCACTGGCTCACCCATGTACTGTTCGTaGCTTACTAGCCCTGATGTGTACGCACCAAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: AVCGTGSPMYCS*LTSPDVYAPRI Trigger: AATCCTTGGTGCGTACACATCAGGGCTAGTAAGCCACGAACAGTACATGGGTGAGCCAGTGCCACACACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTTGGCGCCAAATGCCTTTATCCATGGAGCCAGCTCACTGGCCTGTTGTGTAACCCTCTGTCTCTaGTCTCTGGGGTATCGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LGLAPNAFIHGASSLACCVTLCL*SLGYRT Trigger: AGTTCGATACCCCAGAGACAAGAGACAGAGGGTTAC...ACAACAGGCCAGTGAGCTGGCTCCATGGATAAAGGCATTTGGCGCCAAACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGTCTCAGTGCCATCTTTaGCATTCCTGTCCCCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MSISANATVLKGRAEDRQSQCHL*HSCPQV Trigger: GACCTGGGGACAGGAATGCAAAAGATGGCACTGAGA...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATTGTGCATAGTTGGAGCCTTTTaGTGTTGGCTCCTTTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: GNEITVSAVPAWAWATLCIVGAF*CWLLSL Trigger: AAGTGAAAGGAGCCAACACAAAAAGGCTCCAACTAT...GCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CCA 72 bp | GCCTTTTTGTGTTGGCTCCTTTCACTTAGCTGTGTGTaGCACTGGCTCACCCATGTACTGTTCGTGGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: AFLCWLLSLSCV*HWLTHVLFVAY Trigger: GTAAGCCACGAACAGTACATGGGTGAGCCAGTGCCACACACAGCTAAGTGAAAGGAGCCAACACAAAAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTTGGCGCCAAATGCCTTTATCCATGGAGCCAGCTCACTGGCCTGTTGTTACATACGCTACAGTTaGCATGTGTTCTGCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGLAPNAFIHGASSLACCYIRYS*HVFCIL Trigger: CAGAATGCAGAACACATGCAAACTGTAGCGTATGTA...ACAACAGGCCAGTGAGCTGGCTCCATGGATAAAGGCATTTGGCGCCAAACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR GCA 72 bp | CAGCACTGCTATTATAATTCCCTAGTGCCACTGTATTaGTGCCTCCTCACAGGCTCATGGCCATCTGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: QHCYYNSLVPLY*CLLTGSWPSVY Trigger: ATACACAGATGGCCATGAGCCTGTGAGGAGGCAGCAATACAGTGGCACTAGGGAATTATAATAGCAGTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR GCA 72 bp | CACCACTGGCTTGGGCAGCTTCTCATCCTCTTCTTTTaGATAGTTGGAGCCTTTTTGTGTTGGCTCCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HHWLGQLLILFF*IVGAFLCWLLS Trigger: TGAAAGGAGCCAACACAAAAAGGCTCCAACTATGCAAAAGAAGAGGATGAGAAGCTGCCCAAGCCAGTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CCA 72 bp | CTAGTGCCACTGTATTGCTGCCTCCTCACAGGCTCATaGCCATCTGTGTATCTTCCAGCTAACATTTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: LVPLYCCLLTGS*PSVYLPANISI Trigger: GATTGAAATGTTAGCTGGAAGATACACAGATGGCCATGAGCCTGTGAGGAGGCAGCAATACAGTGGCACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR TCA 72 bp | CTCAGAACCTCTGGAAGAGCAGTCAGTGCTAATTGCTaGGCCATCTCTCCAGCCTGCTTTTGTTTTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LRTSGRAVSANC*AISPACFCFSH Trigger: ATGAGAAAAACAAAAGCAGGCTGGAGAGATGGCTCAGCAATTAGCACTGACTGCTCTTCCAGAGGTTCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR GCA 72 bp | GTCCCCACACCTACAGTCTCCTCTGTTGCTAACATGTaGTACATACGCTACAGTTTGCATGTGTTCTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: VPTPTVSSVANM*YIRYSLHVFCI Trigger: AATGCAGAACACATGCAAACTGTAGCGTATGTAGCACATGTTAGCAACAGAGGAGACTGTAGGTGTGGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CCA 72 bp | ATCCTCTTCTTTTGCATAGTTGGAGCCTTTTTGTGTTaGCTCCTTTCACTTAGCTGTGTGTGGCACTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ILFFCIVGAFLC*LLSLSCVWHWL Trigger: GAGCCAGTGCCACACACAGCTAAGTGAAAGGAGCCAACACAAAAAGGCTCCAACTATGCAAAAGAAGAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGGCCAGGAAACTAGTGTaGTTTAAAGCTTCCATACAT | + |
|
Preference number: 3 (lower is better) Translates to: MSISANATVLKGRAEDRQARKLV*FKASIH Trigger: ATGTATGGAAGCTTTAAACAACACTAGTTTCCTGGC...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR GCA 72 bp | ATCCCATTACAGATAGTTGTGAACCACCATGTGGTTTaGTGGGAATTGAACTCAGAACCTCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IPLQIVVNHHVV*WELNSEPLEEQ Trigger: CTGCTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAAACCACATGGTGGTTCACAACTATCTGTAATGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR GCA 72 bp | TCACTGGCCTGTTGTTTAGAAGATTGTGTAGAGAGGTaGTTTCCACTCTGTTTCTCAGCCACCATGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLACCLEDCVER*FPLCFSATMSK Trigger: CTTACTCATGGTGGCTGAGAAACAGAGTGGAAAGCACCTCTCTACACAATCTTCTAAACAACAGGCCAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CCA 72 bp | CCATTACAGATAGTTGTGAACCACCATGTGGTTTGCTaGGAATTGAACTCAGAACCTCTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLQIVVNHHVVC*ELNSEPLEEQS Trigger: TGACTGCTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAAACCACATGGTGGTTCACAACTATCTGTAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGTGGTTTTCTATTGTTTaGGTTTTCCGAGATGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: MSISANATVLKGRAEDRQWFSIV*VFRDGF Trigger: GAAACCATCTCGGAAAACCAAAACAATAGAAAACCA...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR TCA 72 bp | AGCAAGCAGAGTACTACAAAGTTACAGTCCTATTGGTaGGAAGTATGTGGATCCTCTAGCCAGCTAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKQSTTKLQSYW*EVCGSSSQLME Trigger: CTCCATTAGCTGGCTAGAGGATCCACATACTTCTCACCAATAGGACTGTAACTTTGTAGTACTCTGCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR TCA 72 bp | ACCACCGCTCGGCTAGATTTCTTTATTGTATGTATGTaGGTACACTGTCGTTCTCTTCAGATACACCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TTARLDFFIVCM*VHCRSLQIHQK Trigger: CTTCTGGTGTATCTGAAGAGAACGACAGTGTACTCACATACATACAATAAAGAAATCTAGCCGAGCGGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR GCA 72 bp | CTGCAGATAAAGACAAAACTGCAACACCCCTTGAGTTaGTATACACAGCAAGCAGAGTACTACAAAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LQIKTKLQHPLS*YTQQAEYYKVT Trigger: TGTAACTTTGTAGTACTCTGCTTGCTGTGTATAGCAACTCAAGGGGTGTTGCAGTTTTGTCTTTATCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR GCA 72 bp | CACAGCTCCTTTCCTTGTCTCTACAGCCTTCTGAATTaGAACAATGCTGAACTCAGTAACTTTTTGTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: HSSFPCLYSLLN*NNAELSNFLLL Trigger: GAGTAACAAAAAGTTACTGAGTTCAGCATTGTTGCAATTCAGAAGGCTGTAGAGACAAGGAAAGGAGCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR TCA 72 bp | TATGTCACAGCTCCTTTCCTTGTCTCTACAGCCTTCTaGATTGCAACAATGCTGAACTCAGTAACTTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: YVTAPFLVSTAF*IATMLNSVTFC Trigger: ACAAAAAGTTACTGAGTTCAGCATTGTTGCAATTCAGAAGGCTGTAGAGACAAGGAAAGGAGCTGTGACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTAAAGGCCATCTTTGAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCAAAAGTTACAGTCCTATaGGTGAGAAGTATGTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: LLKAIFEVFKVLAAVCEAKVTVL*VRSMWI Trigger: GATCCACATACTTCTCACCAATAGGACTGTAACTTT...TGCTTCACATACAGCTGCTAAAACTTTAAAAACCTCAAAGATGGCCTTTAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCAGCATCCAAGATATATGTTCTCTCCAGCCTGCTTTaGTTTTTCTCATGTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EVFKVLAAVCEAASKIYVLSSLL*FFSCER Trigger: TCTTTCACATGAGAAAAACAAAAGCAGGCTGGAGAG...AACATATATCTTGGATGCTGCTTCACATACAGCTGCTAAAACTTTAAAAACCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTTCTGCATTTCCTGCTAAAGGCCATCTTTGAGGTTTTTAAAGTTTTAGCATTTCTGTGTAGGAATTaGCTGATTGAAGAGCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IVLHFLLKAIFEVFKVLAFLCRN*LIEELA Trigger: AGCTAGCTCTTCAATCAGCAAATTCCTACACAGAAA...TGCTAAAACTTTAAAAACCTCAAAGATGGCCTTTAGCAGGAAATGCAGAACAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | GAACAGACTGCCCGGACTGCCCATCTGCCTCCCGTCTaGCCCATGTCACCACTGGCTTGGGCAGCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQTARTAHLPPV*PMSPLAWAASH Trigger: ATGAGAAGCTGCCCAAGCCAGTGGTGACATGGGCAAGACGGGAGGCAGATGGGCAGTCCGGGCAGTCTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | GCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTaGGGCCTGGGCCACATTGTGCATCCCAGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWKRDYSECSAS*GLGHIVHPSQP Trigger: AGGCTGACTGGGATGCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR CCA 90 bp | TCTGCTTCCCAAGTGCTGGGATTAAAGGCGCGCGCCACCACCGCTCGGCTAGATATCTTTCTCTGCCCATaGGAAGAGAGACATGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SASQVLGLKARATTARLDIFLCP*EERHEV Trigger: GACTTCATGTCTCTCTTCCCATGGGCAGAGAAAGAT...ATCTAGCCGAGCGGTGGTGGCGCGCGCCTTTAATCCCAGCACTTGGGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | TGTAGGTGCCAGAGACTGATCTTAGGCCTTCTGGGTTaGGCGCCAAATGCCTTTATCCATGGAGCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRCQRLILGLLG*APNAFIHGASS Trigger: TGAGCTGGCTCCATGGATAAAGGCATTTGGCGCCAAACCCAGAAGGCCTAAGATCAGTCTCTGGCACCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCATCCCAGTAGAAGTCTaGCCAGGTTACATAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSAAWKRDYSECSASLGIPVEV*PGYIIA Trigger: GGCAATTATGTAACCTGGGCAGACTTCTACTGGGAT...GCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGTTCGGCAGCATGGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCCAAAAGTGTGGTGCTaGAGATATCCCAGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSAAWKRDYSECSASLGPKVWC*RYPSRS Trigger: ACTTCTACTGGGATATCTGCAGCACCACACTTTTGG...GCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCCATGCTGCCGAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | CCATGGAGCCAGCTCACTGGCCTGTTGTTTAGAAGATaGTGTAGAGAGGTGCTTTCCACTCTGTTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWSQLTGLLFRR*CREVLSTLFLS Trigger: GCTGAGAAACAGAGTGGAAAGCACCTCTCTACACAATCTTCTAAACAACAGGCCAGTGAGCTGGCTCCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | CATTTCCTGCTGTCCCCACACCTACAGTCTCCTCTGTaGCTAACATGTGCTACATACGCTACAGTTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HFLLSPHLQSPL*LTCATYATVCM Trigger: CATGCAAACTGTAGCGTATGTAGCACATGTTAGCAACAGAGGAGACTGTAGGTGTGGGGACAGCAGGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR GCA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGATCTTGATCTTTCTCTaGCCATGGGAAGAGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: MSISANATVLKGRAEDRQILIFL*PWEERH Trigger: ATGTCTCTCTTCCCATGGGCAGAGAAAGATCAAGAT...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | CAGATAGTTGTGAACCACCATGTGGTTTGCTGGGAATaGAACTCAGAACCTCTGGAAGAGCAGTCAGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QIVVNHHVVCWE*NSEPLEEQSVL Trigger: TAGCACTGACTGCTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAAACCACATGGTGGTTCACAACTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR GCA 90 bp | GCCACATTGTGCATCCCAGTCAGCCTTCAGATACCAAGTGAGAAAACAGTCCAAAAACCAAAAGTGTGGTaGTGCAGATATCCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATLCIPVSLQIPSEKTVQKPKVW*CRYPSR Trigger: TCTACTGGGATATCTGCAGCACCACACTTTTGGTTT...TTGGACTGTTTTCTCACTTGGTATCTGAAGGCTGACTGGGATGCACAATGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | GATCCCATTACAGATAGTTGTGAACCACCATGTGGTTaGCTGGGAATTGAACTCAGAACCTCTGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPITDSCEPPCG*LGIELRTSGRA Trigger: TGCTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAAACCACATGGTGGTTCACAACTATCTGTAATGGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | AAATGCCTTTATCCATGGAGCCAGCTCACTGGCCTGTaGTTTAGAAGATTGTGTAGAGAGGTGCTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KCLYPWSQLTGL*FRRLCREVLST Trigger: AGTGGAAAGCACCTCTCTACACAATCTTCTAAACAACAGGCCAGTGAGCTGGCTCCATGGATAAAGGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTAAAGGCCATCTTTGAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCAATGGGAAGAGAGACATaGAGTCATCCAGCGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKAIFEVFKVLAAVCEAMGRET*SHPACP Trigger: TGGACACGCTGGATGACTTCATGTCTCTCTTCCCAT...TGCTTCACATACAGCTGCTAAAACTTTAAAAACCTCAAAGATGGCCTTTAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | AAGTGCCTGCAGATAAAGACAAAACTGCAACACCCCTaGAGTTGCTATACACAGCAAGCAGAGTACTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCLQIKTKLQHP*SCYTQQAEYYK Trigger: TTTGTAGTACTCTGCTTGCTGTGTATAGCAACTCAAGGGGTGTTGCAGTTTTGTCTTTATCTGCAGGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR TCA 90 bp | GAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCAGCATCCAAGATATATGTTACCACTGCATCAGCTTaGCATTGCTCCAACGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVFKVLAAVCEAASKIYVTTASA*HCSNAV Trigger: GACAGCGTTGGAGCAATGTCAAGCTGATGCAGTGGT...AACATATATCTTGGATGCTGCTTCACATACAGCTGCTAAAACTTTAAAAACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR TCA 90 bp | ATTGTTCTGCATTTCCTGCTAAAGGCCATCTTTGAGGTTTTTAAAGTTTTAGCACGCTCTTTTAGATCTTaGTCTTTCTCTGCCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVLHFLLKAIFEVFKVLARSFRS*SFSAHG Trigger: CCCATGGGCAGAGAAAGATCAAGATCTAAAAGAGCG...TGCTAAAACTTTAAAAACCTCAAAGATGGCCTTTAGCAGGAAATGCAGAACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | ACTGTGTTGACTGATACCCTAGCCAGGAAACTAGTGTaGTTTAAAGCTTCCATACATCTTGATATGCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLTDTLARKLV*FKASIHLDMHN Trigger: GTTGTGCATATCAAGATGTATGGAAGCTTTAAACAACACTAGTTTCCTGGCTAGGGTATCAGTCAACACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCAGCATCCAAGATATATGTTGCCAAATGGAAGAGTTaGCTTGATTTTAGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVFKVLAAVCEAASKIYVAKWKS*LDFRPV Trigger: GACTGGCCTAAAATCAAGCCAACTCTTCCATTTGGC...AACATATATCTTGGATGCTGCTTCACATACAGCTGCTAAAACTTTAAAAACCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| 3UTR CAA 72 bp | TCCTCTGTTGCTAACATGTGCTACATACGCTACAGTTaGCATGTGTTCTGCATTCTGAGTAAGTTTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVANMCYIRYS*HVFCILSKFIN Trigger: ATTTATAAACTTACTCAGAATGCAGAACACATGCAAACTGTAGCGTATGTAGCACATGTTAGCAACAGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR CCA 90 bp | CAGACAGATGTGTATTTTTGTGAAGTAGCTTATACACTTTGGTGTATACCTGAAAGGGATTTTGCCAAATaGAAGAGTTGGCTTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTDVYFCEVAYTLWCIPERDFAK*KSWLDF Trigger: AAAATCAAGCCAACTCTTCCATTTGGCAAAATCCCT...TTCAGGTATACACCAAAGTGTATAAGCTACTTCACAAAAATACACATCTGTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS GCA 90 bp | TGCCCATGGGAAGAGAGACATGAAGTCATCCAGCGTGTCCACCACTaGATCAGCTTGACATTGCTCCAACGCTGTCTTCCCAGCCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: CPWEERHEVIQRVHH*ISLTLLQRCLPSQI Trigger: GATTTGGCTGGGAAGACAGCGTTGGAGCAATGTCAAGCTGATGCAGTGGTGGACACGCTGGATGACTTCATGTCTCTCTTCCCATGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
||
| CDS-3UTR CAA 90 bp | TCTGCTTCCCAAGTGCTGGGATTAAAGGCGCGCGCCACCACCGCTCGGCTAGATTTTTGGTCAAATATCTaGCTATTGCGAGGCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SASQVLGLKARATTARLDFWSNI*LLRGSG Trigger: ACCAGAGCCTCGCAATAGCAAGATATTTGACCAAAA...ATCTAGCCGAGCGGTGGTGGCGCGCGCCTTTAATCCCAGCACTTGGGAAGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS-3UTR CAA 90 bp | GGAAACGAGATTACAGTGAGTGCAGTGCCAGCTTGGGCCTGGGCCACATTGTGCAATGGAAGAGTTGGCTaGATTTTAGGCCAGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GNEITVSAVPAWAWATLCNGRVG*ILGQSA Trigger: AGCTGACTGGCCTAAAATCAAGCCAACTCTTCCATT...GCACAATGTGGCCCAGGCCCAAGCTGGCACTGCACTCACTGTAATCTCGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS TCA 90 bp | AAGAGAGACATGAAGTCATCCAGCGTGTCCACCACTGCATCAGCTTaGCATTGCTCCAACGCTGTCTTCCCAGCCAAATCTGTGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: KRDMKSSSVSTTASA*HCSNAVFPAKSVFL Trigger: CAAAAACACAGATTTGGCTGGGAAGACAGCGTTGGAGCAATGTCAAGCTGATGCAGTGGTGGACACGCTGGATGACTTCATGTCTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS TCA 90 bp | GCTCTTTTAGATCTTGATCTTTCTCTGCCCATGGGAAGAGAGACATaGAGTCATCCAGCGTGTCCACCACTGCATCAGCTTGACATTGCT | + |
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Preference number: 5 (lower is better) Translates to: ALLDLDLSLPMGRET*SHPACPPLHQLDIA Trigger: AGCAATGTCAAGCTGATGCAGTGGTGGACACGCTGGATGACTTCATGTCTCTCTTCCCATGGGCAGAGAAAGATCAAGATCTAAAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS GCA 90 bp | TGTCTTCCCAGCCAAATCTGTGTTTTTGGTCAAATATCTTGCTATTaGGAGGCTCTGGTGGATTGTAAGTCCTTCCACCTCCAAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: CLPSQICVFGQISCY*EALVDCKSFHLQNR Trigger: CCTGTTTTGGAGGTGGAAGGACTTACAATCCACCAGAGCCTCGCAATAGCAAGATATTTGACCAAAAACACAGATTTGGCTGGGAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS-3UTR CAA 90 bp | ATGAGTATAAGTGCAAATGCCACAGTGCTTAAGGGGAGGGCAGAGGACAGACAGTGTGTGAGCAATTCATaGAACATCCGCTCTTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: MSISANATVLKGRAEDRQCVSNS*NIRSFR Trigger: TCTAAAAGAGCGGATGTTCAATGAATTGCTCACACA...CTGTCTGTCCTCTGCCCTCCCCTTAAGCACTGTGGCATTTGCACTTATACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS GCA 90 bp | GGTAGATATCCAACAAGCCAGGCTTTAAAACCAAAAGTGTGGTGCTaGAGATATCCCAGTAGAAGTCTGCCCAGGTTACATAATTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: GRYPTSQALKPKVWC*RYPSRSLPRLHNCL Trigger: TAGGCAATTATGTAACCTGGGCAGACTTCTACTGGGATATCTGCAGCACCACACTTTTGGTTTTAAAGCCTGGCTTGTTGGATATCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS-3UTR CAA 90 bp | CTGCTAAAGGCCATCTTTGAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCAGGGATAGCTTGGACTTaGTTCCGTAATGACACCAGT | + |
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Preference number: 5 (lower is better) Translates to: LLKAIFEVFKVLAAVCEAGIAWT*FRNDTS Trigger: ACTGGTGTCATTACGGAACAAAGTCCAAGCTATCCC...TGCTTCACATACAGCTGCTAAAACTTTAAAAACCTCAAAGATGGCCTTTAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS-3UTR CAA 90 bp | CTGCTAAAGGCCATCTTTGAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCATCCAAAACAGGGATTTaGCCAAATGGAAGAGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: LLKAIFEVFKVLAAVCEASKTGI*PNGRVG Trigger: GCCAACTCTTCCATTTGGCAAAATCCCTGTTTTGGA...TGCTTCACATACAGCTGCTAAAACTTTAAAAACCTCAAAGATGGCCTTTAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS-3UTR CAA 90 bp | CTGCTAAAGGCCATCTTTGAGGTTTTTAAAGTTTTAGCAGCTGTATGTGAAGCATCAAATATCTTGCTATaGCGAGGCTCTGGTGGATTG | + |
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Preference number: 5 (lower is better) Translates to: LLKAIFEVFKVLAAVCEASNILL*RGSGGL Trigger: CAATCCACCAGAGCCTCGCAATAGCAAGATATTTGA...TGCTTCACATACAGCTGCTAAAACTTTAAAAACCTCAAAGATGGCCTTTAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS-3UTR CAA 90 bp | CTTGAGTTGCTATACACAGCAAGCAGAGTACTACAAAGTTACAGTCCTATTGGTCCTATAAACCACTCTTaGTCTCCTAAGTATGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LELLYTASRVLQSYSPIGPINHS*SPKYVS Trigger: GGACACATACTTAGGAGACAAAGAGTGGTTTATAGG...ACCAATAGGACTGTAACTTTGTAGTACTCTGCTTGCTGTGTATAGCAACTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CAA 72 bp | GTCATCCAGCGTGTCCACCACTGCATCAGCTTGACATaGCTCCAACGCTGTCTTCCCAGCCAAATCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VIQRVHHCISLT*LQRCLPSQICV Trigger: AACACAGATTTGGCTGGGAAGACAGCGTTGGAGCAATGTCAAGCTGATGCAGTGGTGGACACGCTGGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS TCA 72 bp | ATGAAGTCATCCAGCGTGTCCACCACTGCATCAGCTTaGCATTGCTCCAACGCTGTCTTCCCAGCCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: MKSSSVSTTASA*HCSNAVFPAKS Trigger: AGATTTGGCTGGGAAGACAGCGTTGGAGCAATGTCAAGCTGATGCAGTGGTGGACACGCTGGATGACTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS TCA 72 bp | GATCTTGATCTTTCTCTGCCCATGGGAAGAGAGACATaGAGTCATCCAGCGTGTCCACCACTGCATCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: DLDLSLPMGRET*SHPACPPLHQL Trigger: AAGCTGATGCAGTGGTGGACACGCTGGATGACTTCATGTCTCTCTTCCCATGGGCAGAGAAAGATCAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CAA 90 bp | AGACATGAAGTCATCCAGCGTGTCCACCACTGCATCAGCTTGACATaGCTCCAACGCTGTCTTCCCAGCCAAATCTGTGTTTTTGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: RHEVIQRVHHCISLT*LQRCLPSQICVFGQ Trigger: TTGACCAAAAACACAGATTTGGCTGGGAAGACAGCGTTGGAGCAATGTCAAGCTGATGCAGTGGTGGACACGCTGGATGACTTCATGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CAA 90 bp | GAAGAGAGACATGAAGTCATCCAGCGTGTCCACCACTGCATCAGCTaGACATTGCTCCAACGCTGTCTTCCCAGCCAAATCTGTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: EERHEVIQRVHHCIS*TLLQRCLPSQICVF Trigger: AAAAACACAGATTTGGCTGGGAAGACAGCGTTGGAGCAATGTCAAGCTGATGCAGTGGTGGACACGCTGGATGACTTCATGTCTCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CAA 72 bp | TGCTCCAACGCTGTCTTCCCAGCCAAATCTGTGTTTTaGGTCAAATATCTTGCTATTGCGAGGCTCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CSNAVFPAKSVF*VKYLAIARLWW Trigger: CCACCAGAGCCTCGCAATAGCAAGATATTTGACCAAAAACACAGATTTGGCTGGGAAGACAGCGTTGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CAA 90 bp | AGGCTCTGGTGGATTGTAAGTCCTTCCACCTCCAAAACAGGGATTTaGCCAAATGGAAGAGTTGGCTTGATTTTAGGCCAGTCAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RLWWIVSPSTSKTGI*PNGRVGLILGQSAC Trigger: ACAAGCTGACTGGCCTAAAATCAAGCCAACTCTTCCATTTGGCAAAATCCCTGTTTTGGAGGTGGAAGGACTTACAATCCACCAGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS GCA 72 bp | CCAACAAGCCAGGCTTTAAAACCAAAAGTGTGGTGCTaGAGATATCCCAGTAGAAGTCTGCCCAGGTTACAT | + |
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Preference number: 6 (lower is better) Translates to: PTSQALKPKVWC*RYPSRSLPRLH Trigger: ATGTAACCTGGGCAGACTTCTACTGGGATATCTGCAGCACCACACTTTTGGTTTTAAAGCCTGGCTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CCA 72 bp | AGATATCCAACAAGCCAGGCTTTAAAACCAAAAGTGTaGTGCTGCAGATATCCCAGTAGAAGTCTGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RYPTSQALKPKV*CCRYPSRSLPR Trigger: CCTGGGCAGACTTCTACTGGGATATCTGCAGCACCACACTTTTGGTTTTAAAGCCTGGCTTGTTGGATATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS GCA 72 bp | TATCCAACAAGCCAGGCTTTAAAACCAAAAGTGTGGTaGTGCAGATATCCCAGTAGAAGTCTGCCCAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: YPTSQALKPKVW*CRYPSRSLPRL Trigger: TAACCTGGGCAGACTTCTACTGGGATATCTGCAGCACCACACTTTTGGTTTTAAAGCCTGGCTTGTTGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CCA 72 bp | GTGTTTTTGGTCAAATATCTTGCTATTGCGAGGCTCTaGTGGATTGTAAGTCCTTCCACCTCCAAAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: VFLVKYLAIARL*WIVSPSTSKTG Trigger: CCCTGTTTTGGAGGTGGAAGGACTTACAATCCACCAGAGCCTCGCAATAGCAAGATATTTGACCAAAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CAA 72 bp | TGGATTGTAAGTCCTTCCACCTCCAAAACAGGGATTTaGCCAAATGGAAGAGTTGGCTTGATTTTAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: WIVSPSTSKTGI*PNGRVGLILGQ Trigger: CTGGCCTAAAATCAAGCCAACTCTTCCATTTGGCAAAATCCCTGTTTTGGAGGTGGAAGGACTTACAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS TCA 72 bp | GTGAGCAATTCATTGAACATCCGCTCTTTTAGATCTTaGTCTTTCTCTGCCCATGGGAAGAGAGACATGAAG | + |
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Preference number: 6 (lower is better) Translates to: VSNSLNIRSFRS*SFSAHGKRDMK Trigger: CTTCATGTCTCTCTTCCCATGGGCAGAGAAAGATCAAGATCTAAAAGAGCGGATGTTCAATGAATTGCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS GCA 72 bp | CAAAAGTGTGGTGCTGCAGATATCCCAGTAGAAGTCTaGCCAGGTTACATAATTGCCTATAAACCACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QKCGAADIPVEV*PGYIIAYKPLF Trigger: AAAGAGTGGTTTATAGGCAATTATGTAACCTGGGCAGACTTCTACTGGGATATCTGCAGCACCACACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CCA 72 bp | TTTTTGGTCAAATATCTTGCTATTGCGAGGCTCTGGTaGATTGTAAGTCCTTCCACCTCCAAAACAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: FLVKYLAIARLW*IVSPSTSKTGI Trigger: AATCCCTGTTTTGGAGGTGGAAGGACTTACAATCCACCAGAGCCTCGCAATAGCAAGATATTTGACCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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| CDS CAA 90 bp | GATTTTGCCAAATGGAAGAGTTGGCTTGATTTTAGGCCAGTCAGCTaGTTCTATTCTGTGATCCTCATACTTTATGTCCAAATAAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: DFAKWKSWLDFRPVS*FYSVILILYVQISE Trigger: TTCGCTTATTTGGACATAAAGTATGAGGATCACAGAATAGAACAAGCTGACTGGCCTAAAATCAAGCCAACTCTTCCATTTGGCAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031982.5 |
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