Pregenerated sensors for HPCAL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046093Ensembl transcript IDs: ENSMUST00000059667.9, ENSMUST00000106246.8, ENSMUST00000152194.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAGGCAGGGACGGGCGCTCTACCACATGGTCTCCTGGGCATACTaGGTTTTAGACACCCAGGAGAATGTGGGAGCAAGGCTCGACCTG | + |
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Preference number: 1 (lower is better) Translates to: PRQGRALYHMVSWAY*VLDTQENVGARLDL Trigger: CAGGTCGAGCCTTGCTCCCACATTCTCCTGGGTGTCTAAAACTCAGTATGCCCAGGAGACCATGTGGTAGAGCGCCCGTCCCTGCCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR GCA 90 bp | AGAAGACCATGCACCTGGGCAGCCTCCACCAAGCAGAGGGACCCATaGATCCCTAGAGACCCTGTCCTACCCCATACTCCGACAAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: RRPCTWAASTKQRDP*IPRDPVLPHTPTKL Trigger: TAGCTTTGTCGGAGTATGGGGTAGGACAGGGTCTCTAGGGATGCATGGGTCCCTCTGCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR TCA 90 bp | ACCACACGCCCCAGCTTCTCAAGCTCTCTCTACGCCCACCCTGGCTaGCAGCATCTCTGTACTAGACTGTTTTCACAGCAGCTCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TTRPSFSSSLYAHPG*QHLCTRLFSQQLKR Trigger: CCTCTTGAGCTGCTGTGAAAACAGTCTAGTACAGAGATGCTGTCAGCCAGGGTGGGCGTAGAGAGAGCTTGAGAAGCTGGGGCGTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | TTCATCTCCATTGTGTTCCACCATCCTGTCCGAGACTGCAACCCTTaGCAGTTGTCTCGCTACCCTGTGAGCTTCCAGAGGGCATGGGAT | + |
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Preference number: 1 (lower is better) Translates to: FISIVFHHPVRDCNP*QLSRYPVSFQRAWD Trigger: ATCCCATGCCCTCTGGAAGCTCACAGGGTAGCGAGACAACTGCCAAGGGTTGCAGTCTCGGACAGGATGGTGGAACACAATGGAGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | GAAAAGGTAATAAAGGGACATAGCAGAGACAGCAGGAACTGCTGGTaGCGAGAGTACGGGTTCTCCAGACCTGATGGTGGCCCTACCGCT | + |
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Preference number: 1 (lower is better) Translates to: EKVIKGHSRDSRNCW*REYGFSRPDGGPTA Trigger: AGCGGTAGGGCCACCATCAGGTCTGGAGAACCCGTACTCTCGCCACCAGCAGTTCCTGCTGTCTCTGCTATGTCCCTTTATTACCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR GCA 90 bp | CAACCCAAACTCAGAAACAAGCTATCGAGATGTGGGTATGCACTGTaGTTGCCCATGGTACCGAGATGTGGGAATGAACAGCGCTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: QPKLRNKLSRCGYAL*LPMVPRCGNEQRLP Trigger: GGGCAAGCGCTGTTCATTCCCACATCTCGGTACCATGGGCAAGCACAGTGCATACCCACATCTCGATAGCTTGTTTCTGAGTTTGGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR GCA 90 bp | CCTCCAAGAACAGCACTGCAAAGCTGCCCAGAAGCTACGAGAGGATaGTTGAAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PPRTALQSCPEATRG*LKVERLQAPPPFRK Trigger: CTTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTAGCTTCTGGGCAGCTTTGCAGTGCTGTTCTTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | GCACCTAAAGTTCCACAGGTTTTTCAGTTGGACTTTCTGCAGCTTTaGGTGGCACCAGCTGGAGGACACACTAGTTCTGACAGCGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: APKVPQVFQLDFLQL*VAPAGGHTSSDSVP Trigger: TGGCACGCTGTCAGAACTAGTGTGTCCTCCAGCTGGTGCCACCCAAAGCTGCAGAAAGTCCAACTGAAAAACCTGTGGAACTTTAGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR TCA 90 bp | CAAGAACAGCACTGCAAAGCTGCCCAGAAGCTACGAGAGGATGCTTaGAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGACTG | + |
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Preference number: 1 (lower is better) Translates to: QEQHCKAAQKLREDA*KWRDFKLLLLFGRL Trigger: CAGTCTTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTAGCTTCTGGGCAGCTTTGCAGTGCTGTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | CTAAAGTTCCACAGGTTTTTCAGTTGGACTTTCTGCAGCTTTGGGTaGCACCAGCTGGAGGACACACTAGTTCTGACAGCGTGCCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: LKFHRFFSWTFCSFG*HQLEDTLVLTACQL Trigger: TAGCTGGCACGCTGTCAGAACTAGTGTGTCCTCCAGCTGGTGCCACCCAAAGCTGCAGAAAGTCCAACTGAAAAACCTGTGGAACTTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | AAACATCCACCCACGTGGCACCTAAAGTTCCACAGGTTTTTCAGTTaGACTTTCTGCAGCTTTGGGTGGCACCAGCTGGAGGACACACTA | + |
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Preference number: 1 (lower is better) Translates to: KHPPTWHLKFHRFFS*TFCSFGWHQLEDTL Trigger: TAGTGTGTCCTCCAGCTGGTGCCACCCAAAGCTGCAGAAAGTCCAACTGAAAAACCTGTGGAACTTTAGGTGCCACGTGGGTGGATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | GCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTTaGCTTTCTCTTCATTTCAAAGGTACGCGAGTAATTACGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: AIARAERNWCLGQWA*LSLHFKGTRVITQL Trigger: CAGCTGCGTAATTACTCGCGTACCTTTGAAATGAAGAGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR TCA 90 bp | TATCTGAGGACAGGCTACTTGAGAGGACCTGTCTCTTTTACAGAATaGGGTGGTGGTCGCTCGAGGAACTTGACTGAGGAGAGAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: YLRTGYLRGPVSFTE*GGGRSRNLTEERKA Trigger: AGCCTTTCTCTCCTCAGTCAAGTTCCTCGAGCGACCACCACCTCATTCTGTAAAAGAGACAGGTCCTCTCAAGTAGCCTGTCCTCAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR TCA 90 bp | TGGACCACAGGTCAGAATCTACAAACATTTCTACCAGAAGGGAGGTaGGCACTCGGAAGTAAGTGGCAAATAGCGTATCTTCTGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: WTTGQNLQTFLPEGR*ALGSKWQIAYLLQG Trigger: GCCCTGCAGAAGATACGCTATTTGCCACTTACTTCCGAGTGCTCACCTCCCTTCTGGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | CTTGCTCCCTCCAAAGGCCACAAGAAGGAAAGTCTGACAGAACTTTaGACCACAGGTCAGAATCTACAAACATTTCTACCAGAAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LAPSKGHKKESLTEL*TTGQNLQTFLPEGR Trigger: CCTCCCTTCTGGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAAGTTCTGTCAGACTTTCCTTCTTGTGGCCTTTGGAGGGAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | GCAGTTAGCATCTGGACAAATCAGATGGAGCAGAGAAGAGACTCTTaGAGAGCCTTGCGTTCGAGTCTTAGCATTGTGTGTCTCTCATAC | + |
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Preference number: 1 (lower is better) Translates to: AVSIWTNQMEQRRDS*RALRSSLSIVCLSY Trigger: GTATGAGAGACACACAATGCTAAGACTCGAACGCAAGGCTCTCCAAGAGTCTCTTCTCTGCTCCATCTGATTTGTCCAGATGCTAACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | AGACCAGCGTGTCCTTTTCTTGCTTCCATAACCTTCTGCGTTAAATaGATTTCTGCTTTTGAGGCTCTGCCATTGCCAGAGCAGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: RPACPFLASITFCVK*ISAFEALPLPEQRG Trigger: TCCTCTCTGCTCTGGCAATGGCAGAGCCTCAAAAGCAGAAATCCATTTAACGCAGAAGGTTATGGAAGCAAGAAAAGGACACGCTGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR TCA 90 bp | GAAGAAGGTGGCTTGCTCCCTCCAAAGGCCACAAGAAGGAAAGTCTaGCAGAACTTTGGACCACAGGTCAGAATCTACAAACATTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: EEGGLLPPKATRRKV*QNFGPQVRIYKHFY Trigger: GTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAAGTTCTGTCAGACTTTCCTTCTTGTGGCCTTTGGAGGGAGCAAGCCACCTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR GCA 90 bp | AGCAATTCTTTGGGGAAGGAAGATAGTGGAGAAGACAACACAAGATaGTTCCAGGACTTGATTAGCAGCCTCCAAGAACAGCACTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SNSLGKEDSGEDNTR*FQDLISSLQEQHCK Trigger: TTTGCAGTGCTGTTCTTGGAGGCTGCTAATCAAGTCCTGGAAGCATCTTGTGTTGTCTTCTCCACTATCTTCCTTCCCCAAAGAATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CCA 90 bp | CAAGCTCCTCCTCCTTTTCGGAAGACTGTAGCCTCAGCAAGTTCTTaGCAGGAAACTTCTGAAAGGATAAAAGTCGATTTGTCTTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: QAPPPFRKTVASASS*QETSERIKVDLSCS Trigger: ACTGCAAGACAAATCGACTTTTATCCTTTCAGAAGTTTCCTGCCAAGAACTTGCTGAGGCTACAGTCTTCCGAAAAGGAGGAGGAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR TCA 90 bp | TTATTCATTGTCAGTGGGAAAAACACACACCACGTGGCACAGGGTTaGTCAGTGAAGATGGTTGCTGTGAACACAATTAGAAGCAGCATG | + |
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Preference number: 1 (lower is better) Translates to: LFIVSGKNTHHVAQG*SVKMVAVNTIRSSM Trigger: CATGCTGCTTCTAATTGTGTTCACAGCAACCATCTTCACTGATCAACCCTGTGCCACGTGGTGTGTGTTTTTCCCACTGACAATGAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATATTGCCATGCCTTTCCTaGCCAGGGGCCCTGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GQVEQGSRAETTSRGIPILPCLS*PGALPL Trigger: GAGGGGCAGGGCCCCTGGCCAGGAAAGGCATGGCAA...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACAGACCGTTTGGCCCTTTGACTaGGGGCCTGTGGGACCATGC | + |
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Preference number: 2 (lower is better) Translates to: REQGRDHLSGNPDSPGQTVWPFD*GPVGPC Trigger: GCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAAC...GGTCTGTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGCTTCCTCACTGCTTAGAAGACCATGCACCTGGGCAGCCTCCACCAAGCTTGCCATGCCTTTCCTaGCCAGGGGCCCTGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: PRLPHCLEDHAPGQPPPSLPCLS*PGALPL Trigger: GAGGGGCAGGGCCCCTGGCCAGGAAAGGCATGGCAA...GCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCTAAGCAGTGAGGAAGCCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACCTCGAGGAACTTGACTaGGGAGAGAAAGGCTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: EQGSRAETTSRGIPIARDLEELD*GEKGLD Trigger: GTCCAAGCCTTTCTCTCCTCAGTCAAGTTCCTCGAG...GTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGGGACAGACCCGGTTTGGCCCTTTGACTGGGGGCCTGTGGGACCATGCTGTTGGGAACAACAGGATTaGAAAGCAAGTCCTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PGTDPVWPFDWGPVGPCCWEQQD*KASPQP Trigger: GGGCTGAGGACTTGCTTTGCAATCCTGTTGTTCCCA...ACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGTCGCTCGAGGAACTTaGCTGAGGAGAGAAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GQVEQGSRAETTSRGIPIVARGT*LRRERL Trigger: AAGCCTTTCTCTCCTCAGTCAAGTTCCTCGAGCGAC...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR CAA 90 bp | CTCTCGGGGAATCCCGATAGCCCGGGACAGACCCGGTTTGGCCCTTaGACTGGGGGCCTGTGGGACCATGCTGTTTATTTGGACCATAAT | + |
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Preference number: 2 (lower is better) Translates to: LSGNPDSPGQTRFGP*TGGLWDHAVYLDHN Trigger: ATTATGGTCCAAATAAACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGGCTATCGGGATTCCCCGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAAGTGCTTCCCAAGCCGGAGTGGAGATGGGAGATCTCTCTCTTCCCAAGGCGAACGTTCCAAAGACTaGGGCCAGAGGGGCCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: AKCFPSRSGDGRSLSSQGERSKD*GQRGQV Trigger: TACCTGGCCCCTCTGGCCCCAGTCTTTGGAACGTTC...GCCTTGGGAAGAGAGAGATCTCCCATCTCCACTCCGGCTTGGGAAGCACTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGATCTCTCTCTTCCCAAGGCAGGGACGGGCGCTCTACCACATGGTCTCCTTCAGTTGGACTTTCTaGAGCTTTGGGTGGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: WEISLFPRQGRALYHMVSFSWTF*SFGWHQ Trigger: CTGGTGCCACCCAAAGCTGCAGAAAGTCCAACTGAA...GGAGACCATGTGGTAGAGCGCCCGTCCCTGCCTTGGGAAGAGAGAGATCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 90 bp | CTTCATCTCCATTGTGTTCCACCATCCTGTCCGAGACTGCAACCCTaGGCAGTTGTCTCGCTACCCTGTGAGCTTCCAGAGGGCATGGGA | + |
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Preference number: 2 (lower is better) Translates to: LHLHCVPPSCPRLQP*AVVSLPCELPEGMG Trigger: TCCCATGCCCTCTGGAAGCTCACAGGGTAGCGAGACAACTGCCAAGGGTTGCAGTCTCGGACAGGATGGTGGAACACAATGGAGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGTGCTTCCCAAGCCGGAGTGGAGATGGGAGATCTCTCTCTTCCCAAGGCGTCTCCTGGGCATACTaGGTTTTAGACACCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: AKCFPSRSGDGRSLSSQGVSWAY*VLDTQE Trigger: CTCCTGGGTGTCTAAAACTCAGTATGCCCAGGAGAC...GCCTTGGGAAGAGAGAGATCTCCCATCTCCACTCCGGCTTGGGAAGCACTTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTCTCTCTACGCCCACCCTGGCTGACAGCATCTCTGTACTAGACTGTTTTGTTGGAAGGTTGCCATaGCTTTCCTGGCCAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: QALSTPTLADSISVLDCFVGRLP*LSWPGA Trigger: GGCCCCTGGCCAGGAAAGGCATGGCAACCTTCCAAC...AAAACAGTCTAGTACAGAGATGCTGTCAGCCAGGGTGGGCGTAGAGAGAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR TCA 90 bp | GCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTTGGCTTTCTCTCGAGGAACTTGACTaGGGAGAGAAAGGCTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: AIARAERNWCLGQWAWLSLEELD*GEKGLD Trigger: GTCCAAGCCTTTCTCTCCTCAGTCAAGTTCCTCGAG...AGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCACTGCTTAGAAGACCATGCACCTGGGCAGCCTCCACCAAGCAGAGGGGCCTCAGCAAGTTCTTaGCAGGAAACTTCTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LPHCLEDHAPGQPPPSRGASASS*QETSER Trigger: CCTTTCAGAAGTTTCCTGCCAAGAACTTGCTGAGGC...CCCTCTGCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCTAAGCAGTGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGTGCTTCCCAAGCCGGAGTGGAGATGGGAGATCTCTCTCTTCCCAAGGCCTACGAGAGGATGCTTaGAAGTGGAGAGACTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: AKCFPSRSGDGRSLSSQGLREDA*KWRDFK Trigger: CTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTAG...GCCTTGGGAAGAGAGAGATCTCCCATCTCCACTCCGGCTTGGGAAGCACTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGCTTCCTCACTGCTTAGAAGACCATGCACCTGGGCAGCCTCCACCAAGCGCATTTAGGTTTTCATaGCTGTGCGAGTCATACCCA | + |
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Preference number: 2 (lower is better) Translates to: PRLPHCLEDHAPGQPPPSAFRFS*LCESYP Trigger: TGGGTATGACTCGCACAGGCATGAAAACCTAAATGC...GCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCTAAGCAGTGAGGAAGCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTCACTGCTTAGAAGACCATGCACCTGGGCAGCCTCCACCAAGCAGAGGGAGCGTGTCCTTTTCTTaGTTCCATAACCTTCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: LPHCLEDHAPGQPPPSRGSVSFS*FHNLLR Trigger: ACGCAGAAGGTTATGGAAGCAAGAAAAGGACACGCT...CCCTCTGCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCTAAGCAGTGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTTGGCTTTCTCCAGAGGGCATGGGATaGGTTTCTGTAAACAACCGT | + |
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Preference number: 2 (lower is better) Translates to: AIARAERNWCLGQWAWLSPEGMG*VSVNNR Trigger: ACGGTTGTTTACAGAAACCCATCCCATGCCCTCTGG...AGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 90 bp | CCCAAACTCAGAAACAAGCTATCGAGATGTGGGTATGCACTGTGCTaGCCCATGGTACCGAGATGTGGGAATGAACAGCGCTTGCCCATG | + |
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Preference number: 2 (lower is better) Translates to: PKLRNKLSRCGYALC*PMVPRCGNEQRLPM Trigger: CATGGGCAAGCGCTGTTCATTCCCACATCTCGGTACCATGGGCAAGCACAGTGCATACCCACATCTCGATAGCTTGTTTCTGAGTTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 90 bp | GCTTTTGAGGCTCTGCCATTGCCAGAGCAGAGAGGAATTGGTGCCTaGGCCAATGGGCTTGGCTTTCTCTTCATTTCAAAGGTACGCGAG | + |
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Preference number: 2 (lower is better) Translates to: AFEALPLPEQRGIGA*ANGLGFLFISKVRE Trigger: CTCGCGTACCTTTGAAATGAAGAGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGCAGAGCCTCAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTCTCTCTACGCCCACCCTGGCTGACAGCATCTCTGTACTAGACTGTTTTGTCGCTCGAGGAACTTaGCTGAGGAGAGAAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QALSTPTLADSISVLDCFVARGT*LRRERL Trigger: AAGCCTTTCTCTCCTCAGTCAAGTTCCTCGAGCGAC...AAAACAGTCTAGTACAGAGATGCTGTCAGCCAGGGTGGGCGTAGAGAGAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 90 bp | AAAACATCCACCCACGTGGCACCTAAAGTTCCACAGGTTTTTCAGTaGGACTTTCTGCAGCTTTGGGTGGCACCAGCTGGAGGACACACT | + |
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Preference number: 2 (lower is better) Translates to: KTSTHVAPKVPQVFQ*DFLQLWVAPAGGHT Trigger: AGTGTGTCCTCCAGCTGGTGCCACCCAAAGCTGCAGAAAGTCCAACTGAAAAACCTGTGGAACTTTAGGTGCCACGTGGGTGGATGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 90 bp | CCAAGAACAGCACTGCAAAGCTGCCCAGAAGCTACGAGAGGATGCTaGAAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: PRTALQSCPEATRGC*KVERLQAPPPFRKT Trigger: AGTCTTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTAGCTTCTGGGCAGCTTTGCAGTGCTGTTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGCCAACACAAAGCCTCACCCAGGGTGGATCTTCAGGAAATGACTTTTGCACTGCGCTATGGGAATaGACTGCGCATGCCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: LKPTQSLTQGGSSGNDFCTALWE*TAHAHG Trigger: ACCATGGGCATGCGCAGTTCATTCCCATAGCGCAGT...GCAAAAGTCATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGTGTTGGCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGATCTCTCTCTTCCCAAGGCAGGGACGGGCGCTCTACCACATGGTCTCCTTGGCAGGAAACTTCTaGAAGGATAAAAGTCGATTT | + |
|
Preference number: 2 (lower is better) Translates to: WEISLFPRQGRALYHMVSLAGNF*KDKSRF Trigger: AAATCGACTTTTATCCTTTCAGAAGTTTCCTGCCAA...GGAGACCATGTGGTAGAGCGCCCGTCCCTGCCTTGGGAAGAGAGAGATCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CAA 90 bp | GGGAAGGAAGATAGTGGAGAAGACAACACAAGATGCTTCCAGGACTaGATTAGCAGCCTCCAAGAACAGCACTGCAAAGCTGCCCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GKEDSGEDNTRCFQD*ISSLQEQHCKAAQK Trigger: CTTCTGGGCAGCTTTGCAGTGCTGTTCTTGGAGGCTGCTAATCAAGTCCTGGAAGCATCTTGTGTTGTCTTCTCCACTATCTTCCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CAA 90 bp | TGCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTaGGCTTTCTCTTCATTTCAAAGGTACGCGAGTAATTACGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: CHCQSREELVPWPMG*AFSSFQRYASNYAA Trigger: AGCTGCGTAATTACTCGCGTACCTTTGAAATGAAGAGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CAA 90 bp | ATAACCTTCTGCGTTAAATGGATTTCTGCTTTTGAGGCTCTGCCATaGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ITFCVKWISAFEALP*PEQRGIGALANGLG Trigger: GCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGCAGAGCCTCAAAAGCAGAAATCCATTTAACGCAGAAGGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR TCA 90 bp | TACGAGAGGATGCTTGAAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGTCTCTTTTACAGAATaGGGTGGTGGTCGCTCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YERMLESGETSSSSSFSEVSFTE*GGGRSR Trigger: CCTCGAGCGACCACCACCTCATTCTGTAAAAGAGAC...TTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGACTGTAGCCTCAGCATGGGAACAACAGGATTaGAAAGCAAGTCCTCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KVERLQAPPPFRKTVASAWEQQD*KASPQP Trigger: GGGCTGAGGACTTGCTTTGCAATCCTGTTGTTCCCA...TGCTGAGGCTACAGTCTTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGACCACAGGTCAGAATCTACAAACATTTCTACCAGAAGGGAGGTGAGCACTTCTGCAGCTTTGGGTaGCACCAGCTGGAGGACACA | + |
|
Preference number: 2 (lower is better) Translates to: FGPQVRIYKHFYQKGGEHFCSFG*HQLEDT Trigger: TGTGTCCTCCAGCTGGTGCCACCCAAAGCTGCAGAA...GTGCTCACCTCCCTTCTGGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CAA 90 bp | AGCAGAGAAGAGACTCTTGGAGAGCCTTGCGTTCGAGTCTTAGCATaGTGTGTCTCTCATACAAGAGACCTCTCTCCCTCAACCCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: SREETLGEPCVRVLA*CVSHTRDLSPSTLN Trigger: GTTAAGGGTTGAGGGAGAGAGGTCTCTTGTATGAGAGACACACAATGCTAAGACTCGAACGCAAGGCTCTCCAAGAGTCTCTTCTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR GCA 90 bp | TACGAGAGGATGCTTGAAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAATCGAGATGTGGGTATaGACTGTGCTTGCCCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: YERMLESGETSSSSSFSEIEMWV*TVLAHG Trigger: ACCATGGGCAAGCACAGTGCATACCCACATCTCGAT...TTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGAGAACTTGGTATGCCAGTGTTTTATCTGCATTTAGGTTTTCATGCCTGTGTTTGGCCCTTTGACTaGGGGCCTGTGGGACCATGC | + |
|
Preference number: 2 (lower is better) Translates to: EGELGMPVFYLHLGFHACVWPFD*GPVGPC Trigger: GCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAAC...ACAGGCATGAAAACCTAAATGCAGATAAAACACTGGCATACCAAGTTCTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CAA 90 bp | GCTTGCTCCCTCCAAAGGCCACAAGAAGGAAAGTCTGACAGAACTTaGGACCACAGGTCAGAATCTACAAACATTTCTACCAGAAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ACSLQRPQEGKSDRT*DHRSESTNISTRRE Trigger: CTCCCTTCTGGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAAGTTCTGTCAGACTTTCCTTCTTGTGGCCTTTGGAGGGAGCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGACCACAGGTCAGAATCTACAAACATTTCTACCAGAAGGGAGGTGAGCACTTGACTGGGGGCCTGTaGGACCATGCTGTTTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: FGPQVRIYKHFYQKGGEHLTGGL*DHAVYL Trigger: CAAATAAACAGCATGGTCCCACAGGCCCCCAGTCAA...GTGCTCACCTCCCTTCTGGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | TACGAGAGGATGCTTGAAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGCTGAGCAAGGTGGTTaGGTATTTATGTGTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YERMLESGETSSSSSFSEAEQGG*VFMCLW Trigger: CCACAGACACATAAATACCCAACCACCTTGCTCAGC...TTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CAA 90 bp | AGATTACCTGGCAGATCTAGGACGGAAGGGTTTAGGAAAAGCCTTTaGCACGGAGTACGCCCAGCACATTCTTTAAGCATTTGGTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: RLPGRSRTEGFRKSL*HGVRPAHSLSIWSI Trigger: TATGGACCAAATGCTTAAAGAATGTGCTGGGCGTACTCCGTGCAAAAGGCTTTTCCTAAACCCTTCCGTCCTAGATCTGCCAGGTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTTCCTTTAAGCACAATGAAGCAGCTATGTAGGAAATGTATTCTTAGCCCCTACGCCCACCCTGGCTaGCAGCATCTCTGTACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLPLSTMKQLCRKCILSPYAHPG*QHLCTR Trigger: TCTAGTACAGAGATGCTGTCAGCCAGGGTGGGCGTA...GGGGCTAAGAATACATTTCCTACATAGCTGCTTCATTGTGCTTAAAGGAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTTCCTTTAAGCACAATGAAGCAGCTATGTAGGAAATGTATTCTTAGCCCCCTACCAGAAGGGAGGTaGGCACTCGGAAGTAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLPLSTMKQLCRKCILSPLPEGR*ALGSKW Trigger: CCACTTACTTCCGAGTGCTCACCTCCCTTCTGGTAG...GGGGCTAAGAATACATTTCCTACATAGCTGCTTCATTGTGCTTAAAGGAAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTTCCTTTAAGCACAATGAAGCAGCTATGTAGGAAATGTATTCTTAGCCCCGCACCTTCAGGTGCCTaGCATGGGGCAAGTGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LLPLSTMKQLCRKCILSPAPSGA*HGASVQ Trigger: TTGAACACTTGCCCCATGCCAGGCACCTGAAGGTGC...GGGGCTAAGAATACATTTCCTACATAGCTGCTTCATTGTGCTTAAAGGAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR TCA 90 bp | GGACAAAATGAGATGCAGGCAGATACAAGCCTTAGAAAGCCAAGAAATTCTGTGGAAGAAAGGACTCACTaGACGTTCCAAAGACTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GQNEMQADTSLRKPRNSVEERTH*TFQRLG Trigger: CCCCAGTCTTTGGAACGTTCAGTGAGTCCTTTCTTC...CACAGAATTTCTTGGCTTTCTAAGGCTTGTATCTGCCTGCATCTCATTTTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGAGAACTTGGTATGCCAGTGTTTTATCTGCATTTAGGTTTTCATGCCTGTTACCCAGATCTCTGCTaGCCTGTGCTTCATGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: EGELGMPVFYLHLGFHACYPDLC*PVLHAK Trigger: CTTAGCATGAAGCACAGGTCAGCAGAGATCTGGGTA...ACAGGCATGAAAACCTAAATGCAGATAAAACACTGGCATACCAAGTTCTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTTCCTTTAAGCACAATGAAGCAGCTATGTAGGAAATGTATTCTTAGCCCCCTCCAAGAACAGCACTaGAAAGCTGCCCAGAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LLPLSTMKQLCRKCILSPLQEQH*KAAQKL Trigger: TAGCTTCTGGGCAGCTTTGCAGTGCTGTTCTTGGAG...GGGGCTAAGAATACATTTCCTACATAGCTGCTTCATTGTGCTTAAAGGAAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGACTGTAGCCTCAGCAGCTAGATTAAACATTTaGGGGGAAGGAAAAGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: KVERLQAPPPFRKTVASAARLNI*GEGKAF Trigger: AAAAGCTTTTCCTTCCCCCCAAATGTTTAATCTAGC...TGCTGAGGCTACAGTCTTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | TACGAGAGGATGCTTGAAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAATGTGTCATTGTGGGTTaGGCTAGATTAAACATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: YERMLESGETSSSSSFSECVIVG*ARLNIW Trigger: CCAAATGTTTAATCTAGCCCAACCCACAATGACACA...TTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTTCCTTTAAGCACAATGAAGCAGCTATGTAGGAAATGTATTCTTAGCCCCGCTGTGAGGACAAAATaGGATGCAGGCAGATACAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLPLSTMKQLCRKCILSPAVRTK*DAGRYK Trigger: CTTGTATCTGCCTGCATCTCATTTTGTCCTCACAGC...GGGGCTAAGAATACATTTCCTACATAGCTGCTTCATTGTGCTTAAAGGAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR GCA 90 bp | CTAAAGCCAACACAAAGCCTCACCCAGGGTGGATCTTCAGGAAATGACTTTTGCAAGGAGAACTTGGTATaGCAGTGTTTTATCTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LKPTQSLTQGGSSGNDFCKENLV*QCFICI Trigger: AATGCAGATAAAACACTGGCATACCAAGTTCTCCTT...GCAAAAGTCATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGTGTTGGCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGACCACAGGTCAGAATCTACAAACATTTCTACCAGAAGGGAGGTGAGCACCATTCTTTAAGCATTTaGTCCATAGATAAGCGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FGPQVRIYKHFYQKGGEHHSLSI*SIDKRS Trigger: GCTGCGCTTATCTATGGACCAAATGCTTAAAGAATG...GTGCTCACCTCCCTTCTGGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGAGAACTTGGTATGCCAGTGTTTTATCTGCATTTAGGTTTTCATGCCTGTTTTCGTTTCTTACTCTaGTGTCAGCACCCAAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: EGELGMPVFYLHLGFHACFRFLL*CQHPRC Trigger: ACACCTTGGGTGCTGACATCAGAGTAAGAAACGAAA...ACAGGCATGAAAACCTAAATGCAGATAAAACACTGGCATACCAAGTTCTCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | ATCCCGATAGCCCGGGACAGACCCGGTTTGGCCCTTTaGCTGGGGGCCTGTGGGACCATGCTGTTTATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: IPIARDRPGLAL*LGACGTMLFIW Trigger: CCAAATAAACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGGCTATCGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| 3UTR TCA 72 bp | TGGGAGCAAGGCTCGACCTGTCTGTGGCTTCTCCCATaGGCAAGAGGGCAGAGCCAGTTTGAGGCCTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WEQGSTCLWLLP*ARGQSQFEACW Trigger: CCAACAGGCCTCAAACTGGCTCTGCCCTCTTGCTCATGGGAGAAGCCACAGACAGGTCGAGCCTTGCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATACTGGGAACAACAGGATaGCAAAGCAAGTCCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GQVEQGSRAETTSRGIPILGTTG*QSKSSA Trigger: GGCTGAGGACTTGCTTTGCAATCCTGTTGTTCCCAG...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATACTGAGGACAGGCTACTaGAGAGGACCTGTCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GQVEQGSRAETTSRGIPILRTGY*RGPVSF Trigger: AAAAGAGACAGGTCCTCTCAAGTAGCCTGTCCTCAG...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| 3UTR TCA 72 bp | GGACGGGCGCTCTACCACATGGTCTCCTGGGCATACTaGGTTTTAGACACCCAGGAGAATGTGGGAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRALYHMVSWAY*VLDTQENVGAR Trigger: CCTTGCTCCCACATTCTCCTGGGTGTCTAAAACTCAGTATGCCCAGGAGACCATGTGGTAGAGCGCCCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | GCCTGTGCGAGTCATACCCAGATCTCTGCTGACCTGTaGTTCATGCTAAGTGCTTCCCAAGCCGGAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ACASHTQISADL*FMLSASQAGVE Trigger: CTCCACTCCGGCTTGGGAAGCACTTAGCATGAAGCACAGGTCAGCAGAGATCTGGGTATGACTCGCACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGACCATGCTGTTTATTaGGACCATAATCCTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GQVEQGSRAETTSRGIPIDHAVY*DHNPGN Trigger: GTTCCCAGGATTATGGTCCAAATAAACAGCATGGTC...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGATCTCTCTCTTCCCAAGGCAGGGACGGGCGCTCTACCACATGGTCTCCGCTACGAGAGGATGCTaGAAAGTGGAGAGACTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WEISLFPRQGRALYHMVSATRGC*KVERLQ Trigger: TTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTAGC...GGAGACCATGTGGTAGAGCGCCCGTCCCTGCCTTGGGAAGAGAGAGATCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | ATTGTGTTCCACCATCCTGTCCGAGACTGCAACCCTTaGCAGTTGTCTCGCTACCCTGTGAGCTTCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IVFHHPVRDCNP*QLSRYPVSFQR Trigger: CCTCTGGAAGCTCACAGGGTAGCGAGACAACTGCCAAGGGTTGCAGTCTCGGACAGGATGGTGGAACACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | ATAAAGGGACATAGCAGAGACAGCAGGAACTGCTGGTaGCGAGAGTACGGGTTCTCCAGACCTGATGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IKGHSRDSRNCW*REYGFSRPDGG Trigger: GCCACCATCAGGTCTGGAGAACCCGTACTCTCGCCACCAGCAGTTCCTGCTGTCTCTGCTATGTCCCTTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | AGGGGACAGGGCTACACTGGGGCTCCCATAGTGAACTaGGATACACCTAGGCTTCCTCACTGCTTAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RGQGYTGAPIVN*DTPRLPHCLED Trigger: GTCTTCTAAGCAGTGAGGAAGCCTAGGTGTATCCCAGTTCACTATGGGAGCCCCAGTGTAGCCCTGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGGCTTCCTCACTGCTTAGAAGACCATGCACCTGGGCAGCCTCCACCAAGCCCTTGGCCAATGGGCTaGGCTTTCTCTTCATTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PRLPHCLEDHAPGQPPPSPWPMG*AFSSFQ Trigger: TTGAAATGAAGAGAAAGCCAAGCCCATTGGCCAAGG...GCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCTAAGCAGTGAGGAAGCCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | TGCACTGTGCTTGCCCATGGTACCGAGATGTGGGAATaGACAGCGCTTGCCCATGATACTGCGCTATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CTVLAHGTEMWE*TALAHDTALWE Trigger: TTCCCATAGCGCAGTATCATGGGCAAGCGCTGTTCATTCCCACATCTCGGTACCATGGGCAAGCACAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | CCCAGCTTCTCAAGCTCTCTCTACGCCCACCCTGGCTaGCAGCATCTCTGTACTAGACTGTTTTCACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSFSSSLYAHPG*QHLCTRLFSQQ Trigger: CTGCTGTGAAAACAGTCTAGTACAGAGATGCTGTCAGCCAGGGTGGGCGTAGAGAGAGCTTGAGAAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | TTCATCTCCATTGTGTTCCACCATCCTGTCCGAGACTaGAACCCTTGGCAGTTGTCTCGCTACCCTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FISIVFHHPVRD*NPWQLSRYPVS Trigger: GCTCACAGGGTAGCGAGACAACTGCCAAGGGTTGCAGTCTCGGACAGGATGGTGGAACACAATGGAGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | TGGCACCAGCTGGAGGACACACTAGTTCTGACAGCGTaGCAGCTACCTCACACCTTCATCTCCATTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WHQLEDTLVLTA*QLPHTFISIVF Trigger: GAACACAATGGAGATGAAGGTGTGAGGTAGCTGGCACGCTGTCAGAACTAGTGTGTCCTCCAGCTGGTGCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | ACAGCACTGCAAAGCTGCCCAGAAGCTACGAGAGGATaGTTGAAAGTGGAGAGACTTCAAGCTCCTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TALQSCPEATRG*LKVERLQAPPP Trigger: AGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTAGCTTCTGGGCAGCTTTGCAGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | GTAATAAAGGGACATAGCAGAGACAGCAGGAACTGCTaGTGGCGAGAGTACGGGTTCTCCAGACCTGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: VIKGHSRDSRNC*WREYGFSRPDG Trigger: ACCATCAGGTCTGGAGAACCCGTACTCTCGCCACCAGCAGTTCCTGCTGTCTCTGCTATGTCCCTTTATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | TTGCACGGAGTACGCCCAGCACATTCTTTAAGCATTTaGTCCATAGATAAGCGCAGCCCCCGAAGCCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LHGVRPAHSLSI*SIDKRSPRSLN Trigger: GTTCAGGCTTCGGGGGCTGCGCTTATCTATGGACCAAATGCTTAAAGAATGTGCTGGGCGTACTCCGTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | AGTGTTCAACAAGCATTAGCTGAAGAAAGGACTCACTaGACGTTCCAAAGACTGGGGCCAGAGGGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVQQALAEERTH*TFQRLGPEGPG Trigger: ACCTGGCCCCTCTGGCCCCAGTCTTTGGAACGTTCAGTGAGTCCTTTCTTCAGCTAATGCTTGTTGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| 3UTR TCA 72 bp | CACTGCAAAGCTGCCCAGAAGCTACGAGAGGATGCTTaGAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HCKAAQKLREDA*KWRDFKLLLLF Trigger: GAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTAGCTTCTGGGCAGCTTTGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | GAAACAAGCTATCGAGATGTGGGTATGCACTGTGCTTaGCCATGGTACCGAGATGTGGGAATGAACAGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: ETSYRDVGMHCA*PWYRDVGMNSA Trigger: AGCGCTGTTCATTCCCACATCTCGGTACCATGGGCAAGCACAGTGCATACCCACATCTCGATAGCTTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | GTTCCACAGGTTTTTCAGTTGGACTTTCTGCAGCTTTaGGTGGCACCAGCTGGAGGACACACTAGTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VPQVFQLDFLQL*VAPAGGHTSSD Trigger: GTCAGAACTAGTGTGTCCTCCAGCTGGTGCCACCCAAAGCTGCAGAAAGTCCAACTGAAAAACCTGTGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | CAAAAGACATGCTTAGCAGGCCGTGTGCCAGAGCTATaGAGCAACCCCACGAAGCATCACCAGATAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: QKTCLAGRVPEL*SNPTKHHQINN Trigger: GTTGTTTATCTGGTGATGCTTCGTGGGGTTGCTCCATAGCTCTGGCACACGGCCTGCTAAGCATGTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | CTCTGCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTaGCCAATGGGCTTGGCTTTCTCTTCATTTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LCHCQSREELVP*PMGLAFSSFQR Trigger: CCTTTGAAATGAAGAGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CAA 90 bp | GGACAAAATGAGATGCAGGCAGATACAAGCCTTAGAAAGCCAAGAAATTCTGTGCCGAGACTGCAACCCTaGGCAGTTGTCTCGCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: GQNEMQADTSLRKPRNSVPRLQP*AVVSLP Trigger: GGGTAGCGAGACAACTGCCAAGGGTTGCAGTCTCGG...CACAGAATTTCTTGGCTTTCTAAGGCTTGTATCTGCCTGCATCTCATTTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTTGGCTTTCTATGAGAAGGCTAAATTaGGAACCACCAGATTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: AIARAERNWCLGQWAWLSMRRLN*EPPDSQ Trigger: CTGTGAATCTGGTGGTTCCAAATTTAGCCTTCTCAT...AGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | CTCAGAAACAAGCTATCGAGATGTGGGTATGCACTGTaGTTGCCCATGGTACCGAGATGTGGGAATGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRNKLSRCGYAL*LPMVPRCGNEQ Trigger: CTGTTCATTCCCACATCTCGGTACCATGGGCAAGCACAGTGCATACCCACATCTCGATAGCTTGTTTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | ACCCAAACTCAGAAACAAGCTATCGAGATGTGGGTATaGACTGTGCTTGCCCATGGTACCGAGATGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TQTQKQAIEMWV*TVLAHGTEMWE Trigger: TTCCCACATCTCGGTACCATGGGCAAGCACAGTGCATACCCACATCTCGATAGCTTGTTTCTGAGTTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | CCTTCTGCGTTAAATGGATTTCTGCTTTTGAGGCTCTaGCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSALNGFLLLRL*HCQSREELVPW Trigger: CCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGCAGAGCCTCAAAAGCAGAAATCCATTTAACGCAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | TCGCAAGGAAGCGTAGGCGAAAGTGAAGCGAGGAACTaGAAGAAGCAGGTGGATTTTTCTGGAAAGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQGSVGESEARN*KKQVDFSGKHA Trigger: TGCATGCTTTCCAGAAAAATCCACCTGCTTCTTCCAGTTCCTCGCTTCACTTTCGCCTACGCTTCCTTGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | GGCTTGCTCCCTCCAAAGGCCACAAGAAGGAAAGTCTaGCAGAACTTTGGACCACAGGTCAGAATCTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLLPPKATRRKV*QNFGPQVRIYK Trigger: TTTGTAGATTCTGACCTGTGGTCCAAAGTTCTGTCAGACTTTCCTTCTTGTGGCCTTTGGAGGGAGCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | AAACCAACCCAAACTCAGAAACAAGCTATCGAGATGTaGGTATGCACTGTGCTTGCCCATGGTACCGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: KPTQTQKQAIEM*VCTVLAHGTEM Trigger: CATCTCGGTACCATGGGCAAGCACAGTGCATACCCACATCTCGATAGCTTGTTTCTGAGTTTGGGTTGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCGATCCCTGAAAAACCAACCCAAACTCAGAAACAAGCTATCGAGATGTGGCTGAGGACAGGCTACTaGAGAGGACCTGTCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KPIPEKPTQTQKQAIEMWLRTGY*RGPVSF Trigger: AAAAGAGACAGGTCCTCTCAAGTAGCCTGTCCTCAG...CCACATCTCGATAGCTTGTTTCTGAGTTTGGGTTGGTTTTTCAGGGATCGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | ACTGCGTTTGCCCATGGTAAGTTTCGTTTCTTACTCTaGTGTCAGCACCCAAGGTGTGCGACAGAAAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAFAHGKFRFLL*CQHPRCATEKS Trigger: TGACTTTTCTGTCGCACACCTTGGGTGCTGACATCAGAGTAAGAAACGAAACTTACCATGGGCAAACGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | AGCAGCTATGTAGGAAATGTATTCTTAGCCCCGTGGTaGTTTCTAAAGCCAACACAAAGCCTCACCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSYVGNVFLAPW*FLKPTQSLTQG Trigger: ACCCTGGGTGAGGCTTTGTGTTGGCTTTAGAAATCACCACGGGGCTAAGAATACATTTCCTACATAGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | GTTTCTGTAAACAACCGTATTCTTAGCACCTTCAGGTaGCTGGCATGGGGCAAGTGTTCAACAAGCATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VSVNNRILSTFR*LAWGKCSTSIS Trigger: GCTAATGCTTGTTGAACACTTGCCCCATGCCAGGCACCTGAAGGTGCTAAGAATACGGTTGTTTACAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| 3UTR GCA 72 bp | ATCAGATGGAGCAGAGAAGAGACTCTTGGAGAGCCTTaGGTTCGAGTCTTAGCATTGTGTGTCTCTCATACA | + |
|
Preference number: 3 (lower is better) Translates to: IRWSREETLGEP*VRVLALCVSHT Trigger: TGTATGAGAGACACACAATGCTAAGACTCGAACGCAAGGCTCTCCAAGAGTCTCTTCTCTGCTCCATCTGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | TTGGGGAAGGAAGATAGTGGAGAAGACAACACAAGATaGTTCCAGGACTTGATTAGCAGCCTCCAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LGKEDSGEDNTR*FQDLISSLQEQ Trigger: CTGTTCTTGGAGGCTGCTAATCAAGTCCTGGAAGCATCTTGTGTTGTCTTCTCCACTATCTTCCTTCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | ATCTGGACAAATCAGATGGAGCAGAGAAGAGACTCTTaGAGAGCCTTGCGTTCGAGTCTTAGCATTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: IWTNQMEQRRDS*RALRSSLSIVC Trigger: ACACACAATGCTAAGACTCGAACGCAAGGCTCTCCAAGAGTCTCTTCTCTGCTCCATCTGATTTGTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | CGATTTGTCTTGCAGTTAGCATCTGGACAAATCAGATaGAGCAGAGAAGAGACTCTTGGAGAGCCTTGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: RFVLQLASGQIR*SREETLGEPCV Trigger: AACGCAAGGCTCTCCAAGAGTCTCTTCTCTGCTCCATCTGATTTGTCCAGATGCTAACTGCAAGACAAATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGAGAACTTGGTATGCCAGTGTTTTATCTGCATTTAGGTTTTCATGCCTGTCTGGGAACAACAGGATaGCAAAGCAAGTCCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EGELGMPVFYLHLGFHACLGTTG*QSKSSA Trigger: GGCTGAGGACTTGCTTTGCAATCCTGTTGTTCCCAG...ACAGGCATGAAAACCTAAATGCAGATAAAACACTGGCATACCAAGTTCTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | AGACCAGCGTGTCCTTTTCTTGCTTCCATAACCTTCTaGGTTAAATGGATTTCTGCTTTTGAGGCTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPACPFLASITF*VKWISAFEALP Trigger: TGGCAGAGCCTCAAAAGCAGAAATCCATTTAACGCAGAAGGTTATGGAAGCAAGAAAAGGACACGCTGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR GCA 72 bp | GTTTCGTTTCTTACTCTGATGTCAGCACCCAAGGTGTaGGACAGAAAAGTCACTTGTGGAATTGAGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSFLTLMSAPKV*DRKVTCGIEKR Trigger: CCTTTTCTCAATTCCACAAGTGACTTTTCTGTCGCACACCTTGGGTGCTGACATCAGAGTAAGAAACGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | TGTCCTTTTCTTGCTTCCATAACCTTCTGCGTTAAATaGATTTCTGCTTTTGAGGCTCTGCCATTGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CPFLASITFCVK*ISAFEALPLPE Trigger: CTCTGGCAATGGCAGAGCCTCAAAAGCAGAAATCCATTTAACGCAGAAGGTTATGGAAGCAAGAAAAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | AGATCCCTTTCTTCTAGCTCCTTCTATCTTAGGCTGTaGAAGAATAAGCCGATCCCTGAAAAACCAACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RSLSSSSFYLRL*KNKPIPEKPTQ Trigger: TTGGGTTGGTTTTTCAGGGATCGGCTTATTCTTTCACAGCCTAAGATAGAAGGAGCTAGAAGAAAGGGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR TCA 72 bp | GACTGTAGCCTCAGCAAGTTCTTGGCAGGAAACTTCTaGAAGGATAAAAGTCGATTTGTCTTGCAGTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DCSLSKFLAGNF*KDKSRFVLQLA Trigger: TGCTAACTGCAAGACAAATCGACTTTTATCCTTTCAGAAGTTTCCTGCCAAGAACTTGCTGAGGCTACAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CCA 72 bp | TCCAAAGGCCACAAGAAGGAAAGTCTGACAGAACTTTaGACCACAGGTCAGAATCTACAAACATTTCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SKGHKKESLTEL*TTGQNLQTFLP Trigger: TGGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAAGTTCTGTCAGACTTTCCTTCTTGTGGCCTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| CDS-3UTR TCA 90 bp | CCCGGGACAGACCCGGTTTGGCCCTTTGACTGGGGGCCTGTGGGACCATGCTGTCACGCTGCTGGGGTGTaGGCCCATCCTGGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTDPVWPFDWGPVGPCCHAAGV*AHPGSC Trigger: GCATGAACCAGGATGGGCTCACACCCCAGCAGCGTG...ACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACGCCCAGTTGAGCTTCTaGTCGAAGCTGCCACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQGSRAETTSRGIPIARDAQLSF*SKLPRE Trigger: CTCCCGTGGCAGCTTCGAGCAGAAGCTCAACTGGGC...GTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACAGACCTTGTCCACACGCTGCTaGGGTGTGAGCCCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: REQGRDHLSGNPDSPGQTLSTRC*GVSPSW Trigger: CCAGGATGGGCTCACACCCCAGCAGCGTGTGGACAA...GGTCTGTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | CCCGGGACAGACCCGGTTTGGCCCTTTGACTGGGGGCCTGTGGGACCATGCTGTGAAACTCCTCCAGGTTaGGGATGCCACTGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGTDPVWPFDWGPVGPCCETPPG*GCHWGS Trigger: ACTGCCCCAGTGGCATCCTCAACCTGGAGGAGTTTC...ACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACAGACCGAAACTCCTCCAGGTTaGGGATGCCACTGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: REQGRDHLSGNPDSPGQTETPPG*GCHWGS Trigger: ACTGCCCCAGTGGCATCCTCAACCTGGAGGAGTTTC...GGTCTGTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACAGACCCAGAAAGGGCGCAGATaGACTCCCGGAAGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: REQGRDHLSGNPDSPGQTQKGRR*TPGSRW Trigger: CCATCGACTTCCGGGAGTTCATCTGCGCCCTTTCTG...GGTCTGTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACCAGAAAGGGCGCAGATaGACTCCCGGAAGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EQGSRAETTSRGIPIARDQKGRR*TPGSRW Trigger: CCATCGACTTCCGGGAGTTCATCTGCGCCCTTTCTG...GTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCAGGAGCAACACGATaGACGGGTCACTCTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQVEQGSRAETTSRGIPIAGATR*TGHSWP Trigger: CGGCCAAGAGTGACCCGTCCATCGTGTTGCTCCTGC...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGGACAGACCCGGTTTGGCCCTTTGACTGGGGGCCTGTGGGACCATGCTGTCATGCTGCGCAAACTTaGACGCGTCTCCATAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGTDPVWPFDWGPVGPCCHAAQT*TRLHKG Trigger: TCCCTTATGGAGACGCGTCCAAGTTTGCGCAGCATG...ACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGGTTCATGCGCATCATaGTCACGGTGCCCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GQVEQGSRAETTSRGIPIGSCAS*SRCPPS Trigger: AGATGGTGGGCACCGTGATCATGATGCGCATGAACC...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACTCCTCCAGCGTAATCTaGTCATCCTTATCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQGSRAETTSRGIPIARDSSSVI*SSLSWS Trigger: GGACCAGGATAAGGATGACCAGATTACGCTGGAGGA...GTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGCAGAGAGGACATCAGGTTGGAAGGTTGCCATGCCTTTCCTGGCCAGGGTTAGCTCCTGCTCGCTaGACTCCGTGTTCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQQRGHQVGRLPCLSWPGLAPAR*TPCSGP Trigger: TGGTCCAGAACACGGAGTTCAGCGAGCAGGAGCTAA...CCCTGGCCAGGAAAGGCATGGCAACCTTCCAACCTGATGTCCTCTCTGCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATAGCCCGGGACAAACCCTTATACCACTaGTTTAGCTCCTGCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQGSRAETTSRGIPIARDKPLYH*FSSCSL Trigger: CAGCGAGCAGGAGCTAAAGCAGTGGTATAAGGGTTT...GTCCCGGGCTATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGCAGAGAGGACATCAGGTTGGAAGGTTGCCATGCCTTTCCTGGCCAGGGCTGAACTCCGTGTTCTaGACCAGGTCTTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GQQRGHQVGRLPCLSWPGLNSVF*TRSSST Trigger: GGTGCTGGAAGACCTGGTCCAGAACACGGAGTTCAG...CCCTGGCCAGGAAAGGCATGGCAACCTTCCAACCTGATGTCCTCTCTGCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGTAGAGCAAGGGAGCAGGGCAGAGACCACCTCTCGGGGAATCCCGATACCTGGTCCATCTTCTTaGAGATCTTGTCCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQVEQGSRAETTSRGIPIPGPSS*RSCPHA Trigger: AGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGG...TATCGGGATTCCCCGAGAGGTGGTCTCTGCCCTGCTCCCTTGCTCTACCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR CCA 90 bp | GCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTTGGCTTTCTGCAGGAGCAACACGATaGACGGGTCACTCTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AIARAERNWCLGQWAWLSAGATR*TGHSWP Trigger: CGGCCAAGAGTGACCCGTCCATCGTGTTGCTCCTGC...AGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| 3UTR CAA 72 bp | AATCCCGATAGCCCGGGACAGACCCGGTTTGGCCCTTaGACTGGGGGCCTGTGGGACCATGCTGTTTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NPDSPGQTRFGP*TGGLWDHAVYL Trigger: CAAATAAACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGGCTATCGGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGATCCAGGTCCCAGCTGAGCAAGGTGGTTGGGTATTTATGTGTCTGTGGCCACGCTGCTGGGGTGTaGGCCCATCCTGGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSRSQLSKVVGYLCVCGHAAGV*AHPGSC Trigger: GCATGAACCAGGATGGGCTCACACCCCAGCAGCGTG...GCCACAGACACATAAATACCCAACCACCTTGCTCAGCTGGGACCTGGATCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGCAGAGAGGACATCAGGTTGGAAGGTTGCCATGCCTTTCCTGGCCAGGTTCTGCATGTCACACTaGAGGAGCAACACGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPAERTSGWKVAMPFLARFCMSH*RSNTMD Trigger: GTCCATCGTGTTGCTCCTGCAGTGTGACATGCAGAA...CCTGGCCAGGAAAGGCATGGCAACCTTCCAACCTGATGTCCTCTCTGCTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCACTGCTTAGAAGACCATGCACCTGGGCAGCCTCCACCAAGCAGAGGGCATGCTGCGCAAACTTaGACGCGTCTCCATAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPHCLEDHAPGQPPPSRGHAAQT*TRLHKG Trigger: TCCCTTATGGAGACGCGTCCAAGTTTGCGCAGCATG...CCCTCTGCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCTAAGCAGTGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGGCCAAGGCTAGAGGTGGAGCTAGTGACAGACTATCTGAGGACAGGCTACTTGTCCACACGCTGCTaGGGTGTGAGCCCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRPRLEVELVTDYLRTGYLSTRC*GVSPSW Trigger: CCAGGATGGGCTCACACCCCAGCAGCGTGTGGACAA...GTAGCCTGTCCTCAGATAGTCTGTCACTAGCTCCACCTCTAGCCTTGGCCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGGCCAAGGCTAGAGGTGGAGCTAGTGACAGACTATCTGAGGACAGGCTACATCTTGTCCACACGCTaGTGGGGTGTGAGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SRPRLEVELVTDYLRTGYILSTR*WGVSPS Trigger: GGATGGGCTCACACCCCAGCAGCGTGTGGACAAGAT...GTAGCCTGTCCTCAGATAGTCTGTCACTAGCTCCACCTCTAGCCTTGGCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
||
| 3UTR CAA 72 bp | CATTGTGTTCCACCATCCTGTCCGAGACTGCAACCCTaGGCAGTTGTCTCGCTACCCTGTGAGCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HCVPPSCPRLQP*AVVSLPCELPE Trigger: CTCTGGAAGCTCACAGGGTAGCGAGACAACTGCCAAGGGTTGCAGTCTCGGACAGGATGGTGGAACACAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 72 bp | TGTGGCTTCTCCCATGAGCAAGAGGGCAGAGCCAGTTaGAGGCCTGTTGGCTGTCTGAAACCCTTGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CGFSHEQEGRAS*RPVGCLKPLAL Trigger: TAAGGCCAAGGGTTTCAGACAGCCAACAGGCCTCAAACTGGCTCTGCCCTCTTGCTCATGGGAGAAGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR GCA 90 bp | AGAAGATCCAGGTCCCAGCTGAGCAAGGTGGTTGGGTATTTATGTGTCTGTGGCATCTTGTCCACACGCTaGTGGGGTGTGAGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSRSQLSKVVGYLCVCGILSTR*WGVSPS Trigger: GGATGGGCTCACACCCCAGCAGCGTGTGGACAAGAT...GCCACAGACACATAAATACCCAACCACCTTGCTCAGCTGGGACCTGGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR CCA 90 bp | ACAGACCCGGTTTGGCCCTTTGACTGGGGGCCTGTGGGACCATGCTGTTTATTTGGTGTGAGCCCATCCTaGTTCATGCGCATCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: TDPVWPFDWGPVGPCCLFGVSPS*FMRIMI Trigger: GATCATGATGCGCATGAACCAGGATGGGCTCACACC...AAATAAACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGCAGAGAGGACATCAGGTTGGAAGGTTGCCATGCCTTTCCTGGCCAGGGTGGTCATCCTTATCCTaGTCCATCTTCTTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GQQRGHQVGRLPCLSWPGWSSLS*SIFLKI Trigger: GATCTTCAAGAAGATGGACCAGGATAAGGATGACCA...CCCTGGCCAGGAAAGGCATGGCAACCTTCCAACCTGATGTCCTCTCTGCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR CAA 72 bp | CTTTTGAGGCTCTGCCATTGCCAGAGCAGAGAGGAATaGGTGCCTTGGCCAATGGGCTTGGCTTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRLCHCQSREE*VPWPMGLAFSS Trigger: TGAAGAGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGCAGAGCCTCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR TCA 90 bp | AAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGACTGTAGCCTCAGCATTAGCTCCTGCTCGCTaGACTCCGTGTTCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KVERLQAPPPFRKTVASALAPAR*TPCSGP Trigger: TGGTCCAGAACACGGAGTTCAGCGAGCAGGAGCTAA...TGCTGAGGCTACAGTCTTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR CCA 90 bp | CAACCCCACGAAGCATCACCAGATAAACAACTGCTAGTACCACTTGAGGCTAAGCTGAACTCCGTGTTCTaGACCAGGTCTTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QPHEASPDKQLLVPLEAKLNSVF*TRSSST Trigger: GGTGCTGGAAGACCTGGTCCAGAACACGGAGTTCAG...CTTAGCCTCAAGTGGTACTAGCAGTTGTTTATCTGGTGATGCTTCGTGGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR GCA 90 bp | TACCTCACACCTTCATCTCCATTGTGTTCCACCATCCTGTCCGAGACTGCAACCAAACCCTTATACCACTaGTTTAGCTCCTGCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLTPSSPLCSTILSETATKPLYH*FSSCSL Trigger: CAGCGAGCAGGAGCTAAAGCAGTGGTATAAGGGTTT...GGTTGCAGTCTCGGACAGGATGGTGGAACACAATGGAGATGAAGGTGTGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR GCA 90 bp | AAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAAGACTGTAGCCTCAGCATTCTGCATGTCACACTaGAGGAGCAACACGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVERLQAPPPFRKTVASAFCMSH*RSNTMD Trigger: GTCCATCGTGTTGCTCCTGCAGTGTGACATGCAGAA...TGCTGAGGCTACAGTCTTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 72 bp | CCTTTGACTGGGGGCCTGTGGGACCATGCTGTTTATTaGGACCATAATCCTGGGAACAACAGGATTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTGGLWDHAVY*DHNPGNNRIAK Trigger: CTTTGCAATCCTGTTGTTCCCAGGATTATGGTCCAAATAAACAGCATGGTCCCACAGGCCCCCAGTCAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| 3UTR CAA 72 bp | GAGACTCTTGGAGAGCCTTGCGTTCGAGTCTTAGCATaGTGTGTCTCTCATACAAGAGACCTCTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETLGEPCVRVLA*CVSHTRDLSPS Trigger: TGAGGGAGAGAGGTCTCTTGTATGAGAGACACACAATGCTAAGACTCGAACGCAAGGCTCTCCAAGAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 72 bp | CAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTaGGCTTTCTCTTCATTTCAAAGGTACGCGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSREELVPWPMG*AFSSFQRYASN Trigger: ATTACTCGCGTACCTTTGAAATGAAGAGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR TCA 90 bp | GTAGCCTCAGCAAGTTCTTGGCAGGAAACTTCTGAAAGGATAAAAGTCGATTTGGGTTCATGCGCATCATaGTCACGGTGCCCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VASASSWQETSERIKVDLGSCAS*SRCPPS Trigger: AGATGGTGGGCACCGTGATCATGATGCGCATGAACC...CAAATCGACTTTTATCCTTTCAGAAGTTTCCTGCCAAGAACTTGCTGAGGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 72 bp | AATCAGATGGAGCAGAGAAGAGACTCTTGGAGAGCCTaGCGTTCGAGTCTTAGCATTGTGTGTCTCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: NQMEQRRDSWRA*RSSLSIVCLSY Trigger: GTATGAGAGACACACAATGCTAAGACTCGAACGCAAGGCTCTCCAAGAGTCTCTTCTCTGCTCCATCTGATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR TCA 90 bp | TACCTCACACCTTCATCTCCATTGTGTTCCACCATCCTGTCCGAGACTGCAACCCATAAGGGAAGAACTTaGTATAGAGTTGCTGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: YLTPSSPLCSTILSETATHKGRT*YRVAET Trigger: AGTTTCAGCAACTCTATATCAAGTTCTTCCCTTATG...GGTTGCAGTCTCGGACAGGATGGTGGAACACAATGGAGATGAAGGTGTGAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR TCA 90 bp | GTAGCCTCAGCAAGTTCTTGGCAGGAAACTTCTGAAAGGATAAAAGTCGATTTGCCTGGTCCATCTTCTTaGAGATCTTGTCCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: VASASSWQETSERIKVDLPGPSS*RSCPHA Trigger: AGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGG...CAAATCGACTTTTATCCTTTCAGAAGTTTCCTGCCAAGAACTTGCTGAGGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 72 bp | CTCCAAAGGCCACAAGAAGGAAAGTCTGACAGAACTTaGGACCACAGGTCAGAATCTACAAACATTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: LQRPQEGKSDRT*DHRSESTNIST Trigger: GGTAGAAATGTTTGTAGATTCTGACCTGTGGTCCAAAGTTCTGTCAGACTTTCCTTCTTGTGGCCTTTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| 3UTR CAA 72 bp | ATAGACCTTAAAATTCAGAAAGCGAGGCTGGTGAGCTaGGAAGGTGACAAAGTAGATTACCTGGCAGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: IDLKIQKARLVS*EGDKVDYLADL Trigger: TAGATCTGCCAGGTAATCTACTTTGTCACCTTCCAAGCTCACCAGCCTCGCTTTCTGAATTTTAAGGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR CCA 90 bp | TTGCTTCCTTTAAGCACAATGAAGCAGCTATGTAGGAAATGTATTCTTAGCCCCTGGTCATCCTTATCCTaGTCCATCTTCTTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLSTMKQLCRKCILSPWSSLS*SIFLKI Trigger: GATCTTCAAGAAGATGGACCAGGATAAGGATGACCA...GGGGCTAAGAATACATTTCCTACATAGCTGCTTCATTGTGCTTAAAGGAAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR CAA 90 bp | GGCCAGCAGAGAGGACATCAGGTTGGAAGGTTGCCATGCCTTTCCTGGCCAGGGATGGACGGGTCACTCTaGGCCGCCTCCTTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQQRGHQVGRLPCLSWPGMDGSL*AASLNS Trigger: GGAGTTCAAGGAGGCGGCCAAGAGTGACCCGTCCAT...CCCTGGCCAGGAAAGGCATGGCAACCTTCCAACCTGATGTCCTCTCTGCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| CDS-3UTR CAA 90 bp | CCCGGGACAGACCCGGTTTGGCCCTTTGACTGGGGGCCTGTGGGACCATGCTGTTCCTGGTCCATCTTCTaGAAGATCTTGTCCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTDPVWPFDWGPVGPCCSWSIF*KILSTR Trigger: GCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGA...ACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGCTTTGGGTGGCACCAGCTGGAGGACACACTAGTTCTGACAGCGTGCCACTCTTGGCCGCCTCCTaGAACTCCTCCAGCGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: LQLWVAPAGGHTSSDSVPLLAAS*NSSSVI Trigger: GATTACGCTGGAGGAGTTCAAGGAGGCGGCCAAGAG...TGGCACGCTGTCAGAACTAGTGTGTCCTCCAGCTGGTGCCACCCAAAGCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR CAA 90 bp | GCCATTGCCAGAGCAGAGAGGAATTGGTGCCTTGGCCAATGGGCTTGGCTTTCTATGGACGGGTCACTCTaGGCCGCCTCCTTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIARAERNWCLGQWAWLSMDGSL*AASLNS Trigger: GGAGTTCAAGGAGGCGGCCAAGAGTGACCCGTCCAT...AGAAAGCCAAGCCCATTGGCCAAGGCACCAATTCCTCTCTGCTCTGGCAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR CAA 90 bp | CCCGGGACAGACCCGGTTTGGCCCTTTGACTGGGGGCCTGTGGGACCATGCTGTGAACTTGATATAGAGTaGCTGAAACTCCTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGTDPVWPFDWGPVGPCCELDIE*LKLLQV Trigger: AACCTGGAGGAGTTTCAGCAACTCTATATCAAGTTC...ACAGCATGGTCCCACAGGCCCCCAGTCAAAGGGCCAAACCGGGTCTGTCCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| CDS CCA 90 bp | GACGGGTCACTCTTGGCCGCCTCCTTGAACTCCTCCAGCGTAATCTaGTCATCCTTATCCTGGTCCATCTTCTTGAAGATCTTGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DGSLLAASLNSSSVI*SSLSWSIFLKILST Trigger: TGTGGACAAGATCTTCAAGAAGATGGACCAGGATAAGGATGACCAGATTACGCTGGAGGAGTTCAAGGAGGCGGCCAAGAGTGACCCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| CDS-3UTR CAA 90 bp | CCTAGGCTTCCTCACTGCTTAGAAGACCATGCACCTGGGCAGCCTCCACCAAGCGAACTTGATATAGAGTaGCTGAAACTCCTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRLPHCLEDHAPGQPPPSELDIE*LKLLQV Trigger: AACCTGGAGGAGTTTCAGCAACTCTATATCAAGTTC...GCTTGGTGGAGGCTGCCCAGGTGCATGGTCTTCTAAGCAGTGAGGAAGCCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS-3UTR CAA 90 bp | TACGAGAGGATGCTTGAAAGTGGAGAGACTTCAAGCTCCTCCTCCTTTTCGGAATCCTGGTCCATCTTCTaGAAGATCTTGTCCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: YERMLESGETSSSSSFSESWSIF*KILSTR Trigger: GCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGA...TTCCGAAAAGGAGGAGGAGCTTGAAGTCTCTCCACTTTCAAGCATCCTCTCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059667.9 |
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| CDS CCA 72 bp | CTCTTGGCCGCCTCCTTGAACTCCTCCAGCGTAATCTaGTCATCCTTATCCTGGTCCATCTTCTTGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: LLAASLNSSSVI*SSLSWSIFLKI Trigger: GATCTTCAAGAAGATGGACCAGGATAAGGATGACCAGATTACGCTGGAGGAGTTCAAGGAGGCGGCCAAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 |
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| CDS CAA 72 bp | GGACGCGTCTCCATAAGGGAAGAACTTGATATAGAGTaGCTGAAACTCCTCCAGGTTGAGGATGCCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRVSIREELDIE*LKLLQVEDATG Trigger: CCCAGTGGCATCCTCAACCTGGAGGAGTTTCAGCAACTCTATATCAAGTTCTTCCCTTATGGAGACGCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059667.9 ENSMUST00000106246.8 ENSMUST00000152194.2 |
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