Pregenerated sensors for HPCA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028785Ensembl transcript IDs: ENSMUST00000030572.10, ENSMUST00000095807.10, ENSMUST00000116442.9, ENSMUST00000116444.10, ENSMUST00000139450.8, ENSMUST00000164649.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAAAAAGAACCAAGATGCTCCGTGTGGCTGCATGCAGAGGGACATaGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCT | + |
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Preference number: 1 (lower is better) Translates to: LKRTKMLRVAACRGT*GLAGGLRFLPTQNA Trigger: AGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGTCCCTCTGCATGCAGCCACACGGAGCATCTTGGTTCTTTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR CCA 90 bp | CCTTCCCACACAGAATGCTGTGGAGGGGCTCTGCCCATCTGTCTGTaGGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PSHTECCGGALPICL*ASVCVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACACAGAGGCCCACAGACAGATGGGCAGAGCCCCTCCACAGCATTCTGTGTGGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR CCA 90 bp | AGGGCTATCTCGGTCCCACTAAGGGAGATTCTGCCTCTTGGGCCGTaGAGACTAACAGCTGTCTTGCTTAGCCCCTTCCTTGCAGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: RAISVPLREILPLGP*RLTAVLLSPFLAGF Trigger: GAAACCTGCAAGGAAGGGGCTAAGCAAGACAGCTGTTAGTCTCCACGGCCCAAGAGGCAGAATCTCCCTTAGTGGGACCGAGATAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTGAGCCGGAGGGCCGGTaGAGGCAGGGAGGCGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KGIPSLAPSLDRHEGEEAEPEGR*RQGGEL Trigger: CAGCTCGCCTCCCTGCCTTCACCGGCCCTCCGGCTC...AGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGTCTGGCCCCCAGCCTaGATAGACACGAGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GTWGLAGGLRFLPTQNAVVWPPA*IDTRER Trigger: CCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGAC...CACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCCAGAGCCGGAGGGCCGGTaGAGGCAGGGAGGCGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PCRFHFSRGPHTHTVQTPEPEGR*RQGGEL Trigger: CAGCTCGCCTCCCTGCCTTCACCGGCCCTCCGGCTC...TGGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGGTCTGGCCCCCAGCCTaGATAGACACGAGGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TWGLAGGLRFLPTQNAVEVWPPA*IDTRER Trigger: CCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGAC...CTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCGAGCCGGAGGGCCGGTaGAGGCAGGGAGGCGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLAGFTSPEAHTHTQCRPEPEGR*RQGGEL Trigger: CAGCTCGCCTCCCTGCCTTCACCGGCCCTCCGGCTC...GGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATGAGCCGGAGGGCCGGTaGAGGCAGGGAGGCGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ASSQQELGQEVFFCREVDEPEGR*RQGGEL Trigger: CAGCTCGCCTCCCTGCCTTCACCGGCCCTCCGGCTC...ATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTGGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGCACACACACACACAGTaGAGACCCCAGAAAGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: GTWGLAGGLRFLPTQNAVHTHTQ*RPQKGI Trigger: GATCCCTTTCTGGGGTCTGCACTGTGTGTGTGTGTG...CACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGCTGCCCATCTGTCTGTaGGCCTCTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TWGLAGGLRFLPTQNAVELPICL*ASVCVC Trigger: ACACACACACACAGAGGCCCACAGACAGATGGGCAG...CTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGCACGAGAGAGAGAGGTaGAATACAGAGTACAGACGG | + |
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Preference number: 2 (lower is better) Translates to: GTWGLAGGLRFLPTQNAVHERER*NTEYRR Trigger: CCGTCTGTACTCTGTATTTCACCTCTCTCTCTCGTG...CACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCGTCTGGCCCCCAGCCTaGATAGACACGAGGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FLAGFTSPEAHTHTQCRPVWPPA*IDTRER Trigger: CCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGAC...GGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCCAAGGGATCCCCAGTCTaGCCCCCAGCCTGGATAGAC | + |
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Preference number: 2 (lower is better) Translates to: SLQVSLLQRPTHTHSADPKGSPV*PPAWID Trigger: GTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTT...GGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGGGTGTTTTGTTTTACCATaGCCTCCAGCCAGCAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: MGLGRGPALPSHTECCGGCFVLP*PPASKS Trigger: GCTCTTGCTGGCTGGAGGCCATGGTAAAACAAAACA...CCCTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATCAGGGAAGGGATCCCCAGTCTaGCCCCCAGCCTGGATAGAC | + |
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Preference number: 2 (lower is better) Translates to: QPARAGTRSVLLQGSRSGKGSPV*PPAWID Trigger: GTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTT...CCCTGATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGAAGTGTTCTTCTGCAGGGAAGTAGATCAGGGAACTTCTTCAAAGCCCCACCACCTCCCTCCAGGCTaGGGACCACCCAAAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: QEVFFCREVDQGTSSKPHHLPPG*GPPKGD Trigger: GTCCCCTTTGGGTGGTCCTCAGCCTGGAGGGAGGTG...GTGGGGCTTTGAAGAAGTTCCCTGATCTACTTCCCTGCAGAAGAACACTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATTGTGGAAGATCCTCCTaGCTGTGGGTGGGTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: ASSQQELGQEVFFCREVDCGRSS*LWVGVR Trigger: TCTTACACCCACCCACAGTCAGGAGGATCTTCCACA...ATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAAGTGTTCTTCTGCAGGGAAGTAGATCAGGGAACTTCTTCAAAGCCCCACCACACACACACACAGTaGAGACCCCAGAAAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: QEVFFCREVDQGTSSKPHHTHTQ*RPQKGI Trigger: GATCCCTTTCTGGGGTCTGCACTGTGTGTGTGTGTG...GTGGGGCTTTGAAGAAGTTCCCTGATCTACTTCCCTGCAGAAGAACACTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR GCA 72 bp | GGTTTCACTTCTCCAGAGGCCCACACACACACACAGTaGAGACCCCAGAAAGGGATCCCCAGTCTGGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: GFTSPEAHTHTQ*RPQKGIPSLAP Trigger: GGGGGCCAGACTGGGGATCCCTTTCTGGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| 3UTR-3UTR CAA 90 bp | GGGACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGCCTGGGAGTTTTGTTTaGTTTTACCATGGCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: GTWGLAGGLRFLPTQNAVPGSFV*FYHGLQ Trigger: CTGGAGGCCATGGTAAAACAAAACAAAACTCCCAGG...CACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR CCA 72 bp | TCGGTCCCACTAAGGGAGATTCTGCCTCTTGGGCCGTaGAGACTAACAGCTGTCTTGCTTAGCCCCTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SVPLREILPLGP*RLTAVLLSPFL Trigger: AAGGAAGGGGCTAAGCAAGACAGCTGTTAGTCTCCACGGCCCAAGAGGCAGAATCTCCCTTAGTGGGACCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CAA 90 bp | GAACTTCTTCAAAGCCCCACAGCCCAGAAATCATCCGTGGCTCCCCACCAAACATGCTTAGCCCCTTCCTaGCAGGTTTCACTTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: ELLQSPTAQKSSVAPHQTCLAPS*QVSLLQ Trigger: CTGGAGAAGTGAAACCTGCAAGGAAGGGGCTAAGCA...TGTTTGGTGGGGAGCCACGGATGATTTCTGGGCTGTGGGGCTTTGAAGAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTCCAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATTGCTTAGCCCCTTCCTaGCAGGTTTCACTTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: ASSQQELGQEVFFCREVDCLAPS*QVSLLQ Trigger: CTGGAGAAGTGAAACCTGCAAGGAAGGGGCTAAGCA...ATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CAA 90 bp | ATCATCCGTGGCTCCCCACCAAACAAAAAGACTCTTCACCTTGGCATGACTCCCAGACTAACAGCTGTCTaGCTTAGCCCCTTCCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: IIRGSPPNKKTLHLGMTPRLTAV*LSPFLA Trigger: TGCAAGGAAGGGGCTAAGCAAGACAGCTGTTAGTCT...GGGAGTCATGCCAAGGTGAAGAGTCTTTTTGTTTGGTGGGGAGCCACGGATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTTGCGTGAGTGCACGAGAGAGAGAGGTGAAATACAGAGTACAGACGGGGTACCTGGGAGTTTTGTTTaGTTTTACCATGGCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: CLRECTRERGEIQSTDGVPGSFV*FYHGLQ Trigger: CTGGAGGCCATGGTAAAACAAAACAAAACTCCCAGG...TACCCCGTCTGTACTCTGTATTTCACCTCTCTCTCTCGTGCACTCACGCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| 3UTR TCA 72 bp | GTAAATCTGTGGTTATCTAAGTGCAAAGAGGCAGGTTaGGTTTGGGGACCCCCAGTTGGAATCCTGGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: VNLWLSKCKEAG*VWGPPVGILGV Trigger: AACTCCCAGGATTCCAACTGGGGGTCCCCAAACTCAACCTGCCTCTTTGCACTTAGATAACCACAGATTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGGGGCCCACATGAGCTTCTaGTCCAGGCGGCCACGCGAG | + |
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Preference number: 4 (lower is better) Translates to: MGLGRGPALPSHTECCGGAHMSF*SRRPRE Trigger: CTCGCGTGGCCGCCTGGAGCAGAAGCTCATGTGGGC...CCCTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | AAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTGGCCCACATGAGCTTCTaGTCCAGGCGGCCACGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KGSPVWPPAWIDTRERKLAHMSF*SRRPRE Trigger: CTCGCGTGGCCGCCTGGAGCAGAAGCTCATGTGGGC...CAGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| CDS-3UTR TCA 90 bp | ATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGGGGCATCTCCTCCCGGCTaGTGTAGCCATTGCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: MGLGRGPALPSHTECCGGASPPG*CSHCHP Trigger: TGGATGGCAATGGCTACATCAGCCGGGAGGAGATGC...CCCTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | ACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGTTCTCTCGCAGGTCCTaGAGCATCTCTGGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TWGLAGGLRFLPTQNAVEFSRRS*SISGRS Trigger: GCTGCGGCCAGAGATGCTGCAGGACCTGCGAGAGAA...CTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | AAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTGCCCACATGAGCTTCTaGTCCAGGCGGCCACGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KGIPSLAPSLDRHEGEEAAHMSF*SRRPRE Trigger: CTCGCGTGGCCGCCTGGAGCAGAAGCTCATGTGGGC...AGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCCCACATGAGCTTCTaGTCCAGGCGGCCACGCGAG | + |
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Preference number: 4 (lower is better) Translates to: QKGIPSLAPSLDRHEGEEAHMSF*SRRPRE Trigger: CTCGCGTGGCCGCCTGGAGCAGAAGCTCATGTGGGC...TTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | GGGACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGCTGCTGGGATCACACTaGAGCAGGCGCACGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: GTWGLAGGLRFLPTQNAVLLGSH*SRRTMD Trigger: ATCCATCGTGCGCCTGCTGCAGTGTGATCCCAGCAG...CACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | AAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTGTTCTCTCGCAGGTCCTaGAGCATCTCTGGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KGSPVWPPAWIDTRERKLFSRRS*SISGRS Trigger: GCTGCGGCCAGAGATGCTGCAGGACCTGCGAGAGAA...CAGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGTTCTCTCGCAGGTCCTaGAGCATCTCTGGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RKGSPVWPPAWIDTRERKFSRRS*SISGRS Trigger: GCTGCGGCCAGAGATGCTGCAGGACCTGCGAGAGAA...CTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAATTCTCTCGCAGGTCCTaGAGCATCTCTGGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QKGIPSLAPSLDRHEGEEFSRRS*SISGRS Trigger: GCTGCGGCCAGAGATGCTGCAGGACCTGCGAGAGAA...TTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
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| CDS-3UTR GCA 90 bp | CCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCCAGCCCACATGAGCTTCTaGTCCAGGCGGCCACGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PCRFHFSRGPHTHTVQTPAHMSF*SRRPRE Trigger: CTCGCGTGGCCGCCTGGAGCAGAAGCTCATGTGGGC...TGGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR TCA 90 bp | AAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTGCATCTCCTCCCGGCTaGTGTAGCCATTGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGIPSLAPSLDRHEGEEAASPPG*CSHCHP Trigger: TGGATGGCAATGGCTACATCAGCCGGGAGGAGATGC...AGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGGCATCTCCTCCCGGCTaGTGTAGCCATTGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGSPVWPPAWIDTRERKASPPG*CSHCHP Trigger: TGGATGGCAATGGCTACATCAGCCGGGAGGAGATGC...CTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCGCCCACATGAGCTTCTaGTCCAGGCGGCCACGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLAGFTSPEAHTHTQCRPAHMSF*SRRPRE Trigger: CTCGCGTGGCCGCCTGGAGCAGAAGCTCATGTGGGC...GGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAACTGCTGGGATCACACTaGAGCAGGCGCACGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKGIPSLAPSLDRHEGEELLGSH*SRRTMD Trigger: ATCCATCGTGCGCCTGCTGCAGTGTGATCCCAGCAG...TTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGAGAACTGGGAGGCGCTaGTGGGATCACACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGSPVWPPAWIDTRERKRTGRR*WDHTAA Trigger: TGCTGCAGTGTGATCCCAGCAGCGCCTCCCAGTTCT...CTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAAGAACTGGGAGGCGCTaGTGGGATCACACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKGIPSLAPSLDRHEGEERTGRR*WDHTAA Trigger: TGCTGCAGTGTGATCCCAGCAGCGCCTCCCAGTTCT...TTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCCAGCATCTCCTCCCGGCTaGTGTAGCCATTGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCRFHFSRGPHTHTVQTPASPPG*CSHCHP Trigger: TGGATGGCAATGGCTACATCAGCCGGGAGGAGATGC...TGGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCTTCTCTCGCAGGTCCTaGAGCATCTCTGGCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAGFTSPEAHTHTQCRPFSRRS*SISGRS Trigger: GCTGCGGCCAGAGATGCTGCAGGACCTGCGAGAGAA...GGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCCACTGCTGGGATCACACTaGAGCAGGCGCACGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCRFHFSRGPHTHTVQTPLLGSH*SRRTMD Trigger: ATCCATCGTGCGCCTGCTGCAGTGTGATCCCAGCAG...TGGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGAGCATCTCCTCCCGGCTaGTGTAGCCATTGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLAGFTSPEAHTHTQCRASPPG*CSHCHP Trigger: TGGATGGCAATGGCTACATCAGCCGGGAGGAGATGC...TCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACTGCTGGGATCACACTaGAGCAGGCGCACGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFLAGFTSPEAHTHTQCRLLGSH*SRRTMD Trigger: ATCCATCGTGCGCCTGCTGCAGTGTGATCCCAGCAG...TCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGAAGAACTGGGAGGCGCTaGTGGGATCACACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLAGFTSPEAHTHTQCRRTGRR*WDHTAA Trigger: TGCTGCAGTGTGATCCCAGCAGCGCCTCCCAGTTCT...TCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCAGAACTGGGAGGCGCTaGTGGGATCACACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLAGFTSPEAHTHTQCRPRTGRR*WDHTAA Trigger: TGCTGCAGTGTGATCCCAGCAGCGCCTCCCAGTTCT...GGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTTAGCCCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACTGCTGGGATCACACTaGAGCAGGCGCACGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCLAPSLQVSLLQRPTHTLLGSH*SRRTMD Trigger: ATCCATCGTGCGCCTGCTGCAGTGTGATCCCAGCAG...TGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGGGCTAAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATAGAACTGGGAGGCGCTaGTGGGATCACACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSQQELGQEVFFCREVDRTGRR*WDHTAA Trigger: TGCTGCAGTGTGATCCCAGCAGCGCCTCCCAGTTCT...ATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATCAGGGAGAACTGGGAGGCGCTaGTGGGATCACACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPARAGTRSVLLQGSRSGRTGRR*WDHTAA Trigger: TGCTGCAGTGTGATCCCAGCAGCGCCTCCCAGTTCT...CCCTGATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGGGTTGTTTGTGTCCATTTaGCGGAAGATTTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MGLGRGPALPSHTECCGGLFVSI*RKIFSV Trigger: GACTGAGAAAATCTTCCGCCAAATGGACACAAACAA...CCCTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR GCA 90 bp | ATCATCCGTGGCTCCCCACCAAACAAAAAGACTCTTCACCTTGGCATGACTCCCCTGCTGGGATCACACTaGAGCAGGCGCACGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IIRGSPPNKKTLHLGMTPLLGSH*SRRTMD Trigger: ATCCATCGTGCGCCTGCTGCAGTGTGATCCCAGCAG...GGGAGTCATGCCAAGGTGAAGAGTCTTTTTGTTTGGTGGGGAGCCACGGATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTTTGTTTGTGTCCATTTaGCGGAAGATTTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGIPSLAPSLDRHEGEEALFVSI*RKIFSV Trigger: GACTGAGAAAATCTTCCGCCAAATGGACACAAACAA...AGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAAAACCATCTTGTAAATaGCCTGCACAATTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKGIPSLAPSLDRHEGEEKPSCK*PAQFLA Trigger: TGCTAGAAATTGTGCAGGCCATTTACAAGATGGTTT...TTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTAAACCATCTTGTAAATaGCCTGCACAATTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGIPSLAPSLDRHEGEEAKPSCK*PAQFLA Trigger: TGCTAGAAATTGTGCAGGCCATTTACAAGATGGTTT...AGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCTTGTTTGTGTCCATTTaGCGGAAGATTTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLAGFTSPEAHTHTQCRPLFVSI*RKIFSV Trigger: GACTGAGAAAATCTTCCGCCAAATGGACACAAACAA...GGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCAAACCATCTTGTAAATaGCCTGCACAATTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLAGFTSPEAHTHTQCRPKPSCK*PAQFLA Trigger: TGCTAGAAATTGTGCAGGCCATTTACAAGATGGTTT...GGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTTAGCCCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACATTGTTTGTGTCCATTTaGCGGAAGATTTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLAPSLQVSLLQRPTHTLFVSI*RKIFSV Trigger: GACTGAGAAAATCTTCCGCCAAATGGACACAAACAA...TGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGGGCTAAGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTTAGCCCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACAAAACCATCTTGTAAATaGCCTGCACAATTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLAPSLQVSLLQRPTHTKPSCK*PAQFLA Trigger: TGCTAGAAATTGTGCAGGCCATTTACAAGATGGTTT...TGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGGGCTAAGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | ATCATCCGTGGCTCCCCACCAAACAAAAAGACTCTTCACCTTGGCATGACTCCCTTGTTTGTGTCCATTTaGCGGAAGATTTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IIRGSPPNKKTLHLGMTPLFVSI*RKIFSV Trigger: GACTGAGAAAATCTTCCGCCAAATGGACACAAACAA...GGGAGTCATGCCAAGGTGAAGAGTCTTTTTGTTTGGTGGGGAGCCACGGATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CCA 90 bp | ATCATCCGTGGCTCCCCACCAAACAAAAAGACTCTTCACCTTGGCATGACTCCCAAACCATCTTGTAAATaGCCTGCACAATTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIRGSPPNKKTLHLGMTPKPSCK*PAQFLA Trigger: TGCTAGAAATTGTGCAGGCCATTTACAAGATGGTTT...GGGAGTCATGCCAAGGTGAAGAGTCTTTTTGTTTGGTGGGGAGCCACGGATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | GGGACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGACAGCTTGCCGTCATaGTTTGTGTCCATTTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GTWGLAGGLRFLPTQNAVDSLPS*FVSIWR Trigger: CCGCCAAATGGACACAAACAATGACGGCAAGCTGTC...CACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTGTTGAACTCATCCACGTaGAGGATGCCAGTGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGSPVWPPAWIDTRERKLLNSST*RMPVGQ Trigger: CTGCCCCACTGGCATCCTCAACGTGGATGAGTTCAA...CAGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTTTGAACTCATCCACGTaGAGGATGCCAGTGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGIPSLAPSLDRHEGEEALNSST*RMPVGQ Trigger: CTGCCCCACTGGCATCCTCAACGTGGATGAGTTCAA...AGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGGACAGCTTGCCGTCATaGTTTGTGTCCATTTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKGSPVWPPAWIDTRERKDSLPS*FVSIWR Trigger: CCGCCAAATGGACACAAACAATGACGGCAAGCTGTC...CTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCCGACAGCTTGCCGTCATaGTTTGTGTCCATTTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQVSLLQRPTHTHSADPDSLPS*FVSIWR Trigger: CCGCCAAATGGACACAAACAATGACGGCAAGCTGTC...GGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATCAGGGTTGAACTCATCCACGTaGAGGATGCCAGTGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QPARAGTRSVLLQGSRSGLNSST*RMPVGQ Trigger: CTGCCCCACTGGCATCCTCAACGTGGATGAGTTCAA...CCCTGATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGGGCTTGGCCGGGGGCCTGCGCTTCCTTCCCACACAGAATGCTGTGGAGATTGTTTGTGTCCATTaGGCGGAAGATTTTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TWGLAGGLRFLPTQNAVEIVCVH*AEDFLS Trigger: ACTGAGAAAATCTTCCGCCAAATGGACACAAACAAT...CTCCACAGCATTCTGTGTGGGAAGGAAGCGCAGGCCCCCGGCCAAGCCCCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | ATCATCCGTGGCTCCCCACCAAACAAAAAGACTCTTCACCTTGGCATGACTCCCTTGAACTCATCCACGTaGAGGATGCCAGTGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IIRGSPPNKKTLHLGMTPLNSST*RMPVGQ Trigger: CTGCCCCACTGGCATCCTCAACGTGGATGAGTTCAA...GGGAGTCATGCCAAGGTGAAGAGTCTTTTTGTTTGGTGGGGAGCCACGGATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCAAGAGCTGGGACAAGAAGTGTTCTTCTGCAGGGAAGTAGATCAGGGGACAGCTTGCCGTCATaGTTTGTGTCCATTTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QPARAGTRSVLLQGSRSGDSLPS*FVSIWR Trigger: CCGCCAAATGGACACAAACAATGACGGCAAGCTGTC...CCCTGATCTACTTCCCTGCAGAAGAACACTTCTTGTCCCAGCTCTTGCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGCTATTGTTTGTGTCCATTaGGCGGAAGATTTTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGIPSLAPSLDRHEGEEAIVCVH*AEDFLS Trigger: ACTGAGAAAATCTTCCGCCAAATGGACACAAACAAT...AGCTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGATCCCCAGTCTGGCCCCCAGCCTGGATAGACACGAGGGAGAGGAAGATTGTTTGTGTCCATTaGGCGGAAGATTTTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RKGSPVWPPAWIDTRERKIVCVH*AEDFLS Trigger: ACTGAGAAAATCTTCCGCCAAATGGACACAAACAAT...CTTCCTCTCCCTCGTGTCTATCCAGGCTGGGGGCCAGACTGGGGATCCCTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000139450.8 ENSMUST00000164649.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAAGTGTTCTTCTGCAGGGAAGTAGATCAGGGAACTTCTTCAAAGCCCCACTTGAACTCATCCACGTaGAGGATGCCAGTGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QEVFFCREVDQGTSSKPHLNSST*RMPVGQ Trigger: CTGCCCCACTGGCATCCTCAACGTGGATGAGTTCAA...GTGGGGCTTTGAAGAAGTTCCCTGATCTACTTCCCTGCAGAAGAACACTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR CAA 90 bp | TGTTTGCGTGAGTGCACGAGAGAGAGAGGTGAAATACAGAGTACAGACGGGGTAGACAGCTTGCCGTCATaGTTTGTGTCCATTTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: CLRECTRERGEIQSTDGVDSLPS*FVSIWR Trigger: CCGCCAAATGGACACAAACAATGACGGCAAGCTGTC...TACCCCGTCTGTACTCTGTATTTCACCTCTCTCTCTCGTGCACTCACGCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR CAA 90 bp | TCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGACCCCATTGTTTGTGTCCATTaGGCGGAAGATTTTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SLQVSLLQRPTHTHSADPIVCVH*AEDFLS Trigger: ACTGAGAAAATCTTCCGCCAAATGGACACAAACAAT...GGGGTCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR CAA 90 bp | CCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACACACAGTGCAGAATTGTTTGTGTCCATTaGGCGGAAGATTTTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: PFLAGFTSPEAHTHTQCRIVCVH*AEDFLS Trigger: ACTGAGAAAATCTTCCGCCAAATGGACACAAACAAT...TCTGCACTGTGTGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116442.9 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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| CDS-3UTR CAA 90 bp | TCTTGCTTAGCCCCTTCCTTGCAGGTTTCACTTCTCCAGAGGCCCACACACACAATTGTTTGTGTCCATTaGGCGGAAGATTTTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SCLAPSLQVSLLQRPTHTIVCVH*AEDFLS Trigger: ACTGAGAAAATCTTCCGCCAAATGGACACAAACAAT...TGTGTGTGTGGGCCTCTGGAGAAGTGAAACCTGCAAGGAAGGGGCTAAGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030572.10 ENSMUST00000095807.10 ENSMUST00000116444.10 ENSMUST00000164649.8 |
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