Pregenerated sensors for HP1BP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028759Ensembl transcript IDs: ENSMUST00000030541.13, ENSMUST00000097836.10, ENSMUST00000105825.8, ENSMUST00000105826.8, ENSMUST00000105827.8, ENSMUST00000124305.8, ENSMUST00000130071.2, ENSMUST00000137851.8, ENSMUST00000137865.8, ENSMUST00000148681.3, ENSMUST00000165861.8
Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTaGCCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GQCSGQQSELGSWSA*PEERSPSESMGWQG Trigger: TCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR TCA 90 bp | CCCTTCAGTCAGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTaGGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PFSQKPSGADNLCLL*GDSALGSKASLAVG Trigger: ACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCTGACTGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR TCA 90 bp | AGCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATaGATCTCAAACAAACACCTTCTCCTCTGGCAGCATGTAAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: SHTQLWGSQETLQVE*ISNKHLLLWQHVRG Trigger: GCCCCTTACATGCTGCCAGAGGAGAAGGTGTTTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR GCA 90 bp | ACTCAAACTATTGTCAACAGACATGATGCAAACAGCTCCCACTGCTaGCTTGACAGGCATGGGCCACCAAGCCTGTCCTTTCTGGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: TQTIVNRHDANSSHC*LDRHGPPSLSFLGC Trigger: ACACCCCAGAAAGGACAGGCTTGGTGGCCCATGCCTGTCAAGGCAGCAGTGGGAGCTGTTTGCATCATGTCTGTTGACAATAGTTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR CCA 90 bp | CAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAAGTaGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: QIPCSPVLPLQSETK*CRQLVLAVRGQCSG Trigger: CCCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR GCA 90 bp | CCTGTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATaGTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: PVLSGVYTGLDFLQL*SCGLGLTCANKLCL Trigger: AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR TCA 90 bp | CATAAGAGCAGAGAATTGTTGGCTCAGGTAGCTAACAATACCCTATaGGTAACCAGTCCCTGGCACACATATGAGGAATTCAAGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: HKSRELLAQVANNTL*VTSPWHTYEEFKLS Trigger: AGAAAGCTTGAATTCCTCATATGTGTGCCAGGGACTGGTTACTCATAGGGTATTGTTAGCTACCTGAGCCAACAATTCTCTGCTCTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR TCA 90 bp | AAACTTTTGTTAAGGCGCATTCAGAGCAGAGAGAGAGACCTTACATaGCCCCAGCTTCTCATAGTACAAGTTACAGTGTCTGATGTATGG | + |
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Preference number: 1 (lower is better) Translates to: KLLLRRIQSRERDLT*PQLLIVQVTVSDVW Trigger: CCATACATCAGACACTGTAACTTGTACTATGAGAAGCTGGGGTCATGTAAGGTCTCTCTCTCTGCTCTGAATGCGCCTTAACAAAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR TCA 90 bp | AACACAAAAGTAAAGTCTGTAAATGTCTTCTGCAGAGTGCACAGATaGAAACAGAAATCAAAAGCCTCTCTGTCAGGTATGAAAGTGTAT | + |
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Preference number: 1 (lower is better) Translates to: NTKVKSVNVFCRVHR*KQKSKASLSGMKVY Trigger: ATACACTTTCATACCTGACAGAGAGGCTTTTGATTTCTGTTTTCATCTGTGCACTCTGCAGAAGACATTTACAGACTTTACTTTTGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGGCTGGGGCTAAGATaGACAGAGGGAGCAGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QRDRRRGALQNLWDGRDGGLGLR*TEGAGQ Trigger: CTGCCCTGCTCCCTCTGTTCATCTTAGCCCCAGCCC...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGTCCCAACACTGCTCCTaGGCCGTCTGGACTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GDSALGSKASLAVGQRDRSQHCS*AVWTSS Trigger: GCTGGAAGTCCAGACGGCGCAGGAGCAGTGTTGGGA...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCTCCCTCCCCCACCCCCTCTTTCTTTCAGACAGGGTTTCTCTGGCTGTCGGGCTGGGGCTAAGATaGACAGAGGGAGCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PPSLPHPLFLSDRVSLAVGLGLR*TEGAGQ Trigger: CTGCCCTGCTCCCTCTGTTCATCTTAGCCCCAGCCC...GACAGCCAGAGAAACCCTGTCTGAAAGAAAGAGGGGGTGGGGGAGGGAGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGTCCCCGACTCAAGCTaGAGACTGGTCAGTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: GDSALGSKASLAVGQRDRVPDSS*RLVSGV Trigger: CACTCCACTGACCAGTCTCCAGCTTGAGTCGGGGAC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGTCCCCGACTCAAGCTaGAGACTGGTCAGTGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QRDRRRGALQNLWDGRDGVPDSS*RLVSGV Trigger: CACTCCACTGACCAGTCTCCAGCTTGAGTCGGGGAC...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTGGGCTGGGGCTAAGATaGACAGAGGGAGCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPGLGLR*TEGAGQ Trigger: CTGCCCTGCTCCCTCTGTTCATCTTAGCCCCAGCCC...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGTCCCAACACTGCTCCTaGGCCGTCTGGACTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRGALQNLWDGRDGGFFPSQHCS*AVWTSS Trigger: GCTGGAAGTCCAGACGGCGCAGGAGCAGTGTTGGGA...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGGGCTGGGGCTAAGATaGACAGAGGGAGCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IQAQALSPFPSHTQLWGSGLGLR*TEGAGQ Trigger: CTGCCCTGCTCCCTCTGTTCATCTTAGCCCCAGCCC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR TCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATAACTTGTGCTTGCTGTaGGGGGACAGTGCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ATQIPVTHDGTSQVGATNNLCLL*GDSALG Trigger: GCCCAGAGCACTGTCCCCTCACAGCAAGCACAAGTT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTaGCAGTTGGTCAGCGTGACC | + |
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Preference number: 2 (lower is better) Translates to: RNQVVQTTCACCEGTVLWAAKRA*QLVSVT Trigger: GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGC...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGCATTCCTTCCCACAATaGTCACATGGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QRDRRRGALQNLWDGRDGHSFPQ*SHGKKK Trigger: CTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATG...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAGGGTGGGATGGGAGTaGGGGGCACACGCACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQRVGWE*GAHAQV Trigger: CACCTGTGCGTGTGCCCCCCACTCCCATCCCACCCT...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTACCCTAAACTTTTGTTAAGGCGCATTCAGAGCAGAGAGAGAGACCTTACAGGGGCAGGGGCCAGCTaGGCAGTCAGCAAACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SYPKLLLRRIQSRERDLTGAGAS*AVSKPL Trigger: CAGAGGTTTGCTGACTGCTCAGCTGGCCCCTGCCCC...TGTAAGGTCTCTCTCTCTGCTCTGAATGCGCCTTAACAAAAGTTTAGGGTAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTCATGTGGATCCCAACACTGCTCCTaGGCCGTCTGGACTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VLSGVYTGLDFLQLCSCGSQHCS*AVWTSS Trigger: GCTGGAAGTCCAGACGGCGCAGGAGCAGTGTTGGGA...TCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTCATGTGGAGCTGTGAGGGGACAGTaGTCTGGGCAGCAAAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: VLSGVYTGLDFLQLCSCGAVRGQ*SGQQSE Trigger: CTCGCTTTGCTGCCCAGAGCACTGTCCCCTCACAGC...TCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR CAA 90 bp | ACAGGGTTTCTCTGGCTGTCACTCACTCTAAAGACCAGGGTAGCCTaGAACTCAGAGATCAGCCTGCTTCTGACTCCTAAGTGCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TGFLWLSLTLKTRVA*NSEISLLLTPKCQD Trigger: GTCCTGGCACTTAGGAGTCAGAAGCAGGCTGATCTCTGAGTTCAAGGCTACCCTGGTCTTTAGAGTGAGTGACAGCCAGAGAAACCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAACAGACAACTTGTGCTTaGTGTGAGGGGACAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: AIRSCGDPRRHFKWNESQQTTCA*CEGTVL Trigger: GAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTG...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR CAA 90 bp | AAACTATTGTCAACAGACATGATGCAAACAGCTCCCACTGCTGCCTaGACAGGCATGGGCCACCAAGCCTGTCCTTTCTGGGGTGTATAC | + |
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Preference number: 2 (lower is better) Translates to: KLLSTDMMQTAPTAA*TGMGHQACPFWGVY Trigger: GTATACACCCCAGAAAGGACAGGCTTGGTGGCCCATGCCTGTCAAGGCAGCAGTGGGAGCTGTTTGCATCATGTCTGTTGACAATAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR TCA 90 bp | CACCAAGCCTGTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTGGGCCTTTGGAGCTaGGTGATCCAGTCTTTACCT | + |
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Preference number: 2 (lower is better) Translates to: HQACPFWGVYRTRFPAVMLGLWS*VIQSLP Trigger: AGGTAAAGACTGGATCACTCAGCTCCAAAGGCCCAG...CATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGACAGGCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCATTCCTTCCCACAATaGTCACATGGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: TTALASLQAGRKAFPTLLHSFPQ*SHGKKK Trigger: CTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATG...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR TCA 90 bp | CACCAAGCCTGTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGGCCTTTGGAGCTGAGTaGTCCAGTCTTTACCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: HQACPFWGVYRTRFPAVMAFGAE*SSLYLS Trigger: GGAAAGGTAAAGACTGGATCACTCAGCTCCAAAGGC...CATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGACAGGCTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR GCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCACATTCCTTCCCACAATaGTCACATGGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: DEQREQGSHTVSEVQVMAHSFPQ*SHGKKK Trigger: CTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATG...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR GCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGCATTCCTTCCCACAATaGTCACATGGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLHSFPQ*SHGKKK Trigger: CTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATG...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTTCCCAACACTGCTCCTaGGCCGTCTGGACTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LQLCSCGLGLTCANKLCLSQHCS*AVWTSS Trigger: GCTGGAAGTCCAGACGGCGCAGGAGCAGTGTTGGGA...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCTCAGAAACCAAGTGGTaGAGACAACTTGTGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: IQAQALSPFPSHTQLWGSSETKW*RQLVLA Trigger: AGCAAGCACAAGTTGTCTGCACCACTTGGTTTCTGA...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTACCCTAAACTTTTGTTAAGGCGCATTCAGAGCAGAGAGAGAGACCTTACAGTCCCCGACTCAAGCTaGAGACTGGTCAGTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SYPKLLLRRIQSRERDLTVPDSS*RLVSGV Trigger: CACTCCACTGACCAGTCTCCAGCTTGAGTCGGGGAC...TGTAAGGTCTCTCTCTCTGCTCTGAATGCGCCTTAACAAAAGTTTAGGGTAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCCAGTCAGAAACCAAGTaGTGCAGACAACTTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: IQAQALSPFPSHTQLWGSQSETK*CRQLVL Trigger: AAGCACAAGTTGTCTGCACCACTTGGTTTCTGACTG...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR GCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATCATTCCTTCCCACAATaGTCACATGGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: ATQIPVTHDGTSQVGATNHSFPQ*SHGKKK Trigger: CTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATG...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGCAGACAACTTGTGCTTaGTGTGAGGGGACAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQQTTCA*CEGTVL Trigger: GAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTG...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTGTCCCCGACTCAAGCTaGAGACTGGTCAGTGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LQLCSCGLGLTCANKLCLVPDSS*RLVSGV Trigger: CACTCCACTGACCAGTCTCCAGCTTGAGTCGGGGAC...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATAGGAAACCGTTTGCCTaGTATCAAAAGTTCTATGGA | + |
|
Preference number: 2 (lower is better) Translates to: ATQIPVTHDGTSQVGATNRKPFA*YQKFYG Trigger: TCCATAGAACTTTTGATATCAGGCAAACGGTTTCCT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAGCTAACAATACCCTATaGGTAACCAGTCCCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SSIFRDSFFNHFGAGDFRANNTL*VTSPWH Trigger: GTGCCAGGGACTGGTTACTCATAGGGTATTGTTAGC...TCTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTCAGACAACTTGTGCTTaGTGTGAGGGGACAGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LQLCSCGLGLTCANKLCLQTTCA*CEGTVL Trigger: GAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTG...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR GCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAATCAGAAACCAAGTGGTaGAGACAACTTGTGCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQSETKW*RQLVLA Trigger: AGCAAGCACAAGTTGTCTGCACCACTTGGTTTCTGA...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCATATCAAAAGTTCTATaGAAAGAACAGGGTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: IQAQALSPFPSHTQLWGSISKVL*KEQGGM Trigger: CATCCCACCCTGTTCTTTCCATAGAACTTTTGATAT...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATAGGAGACACTTCAAGTaGAATGAATCTCAAACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ATQIPVTHDGTSQVGATNRRHFK*NESQTN Trigger: GTTTGTTTGAGATTCATTCCACTTGAAGTGTCTCCT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAGAAAAAGGAAGCCATaGTATCCCTTGCAGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQRKRKP*YPLQEE Trigger: CTCCTCCTGCAAGGGATACCATGGCTTCCTTTTTCT...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTGCAAGTATGTCTGTGTaGGAGTGTCAGAAACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LQLCSCGLGLTCANKLCLASMSV*ECQKPW Trigger: CCAGGGTTTCTGACACTCTCACACAGACATACTTGC...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAATATCAAAAGTTCTATaGAAAGAACAGGGTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: AIRSCGDPRRHFKWNESQISKVL*KEQGGM Trigger: CATCCCACCCTGTTCTTTCCATAGAACTTTTGATAT...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTAGAGAGAGATCTCTGTaGTGGGCTACTGTCTGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LQLCSCGLGLTCANKLCLRERSL*WATVCN Trigger: GTTACAGACAGTAGCCCACCACAGAGATCTCTCTCT...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAAGGAAACCGTTTGCCTaGTATCAAAAGTTCTATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSIFRDSFFNHFGAGDFRRKPFA*YQKFYG Trigger: TCCATAGAACTTTTGATATCAGGCAAACGGTTTCCT...TCTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAATGTCTTCTGCAGAGTaGACAGATGAAAACAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSIFRDSFFNHFGAGDFRMSSAE*TDENRN Trigger: ATTTCTGTTTTCATCTGTGCACTCTGCAGAAGACAT...TCTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACTAGGCTCTTATGATGTTGAGAAAAGTTTTTCAATAAAGATGACTCCTCCCAGGAGACACTTCAAGTaGAATGAATCTCAAACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KLGSYDVEKSFSIKMTPPRRHFK*NESQTN Trigger: GTTTGTTTGAGATTCATTCCACTTGAAGTGTCTCCT...GGGAGGAGTCATCTTTATTGAAAAACTTTTCTCAACATCATAAGAGCCTAGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | CGGATCACAGAAAGAGGACGAGGGCTGGGGCTAAGATaGACAGAGGGAGCAGGGCAGTCACACAGTCAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: RITERGRGLGLR*TEGAGQSHSQR Trigger: TCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATCTTAGCCCCAGCCCTCGTCCTCTTTCTGTGATCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR CCA 72 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATaGGATGGCAGGGACGGGGGCTTCTTTCCGAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QRDRRRGALQNL*DGRDGGFFPKL Trigger: TAACTTCGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATAAGCGAGCTTGGCAGTaGGTCAGCGTGACCGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ATQIPVTHDGTSQVGATNKRAWQ*VSVTGG Trigger: TCCTCCGGTCACGCTGACCAACTGCCAAGCTCGCTT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGAAGCGAGCTTGGCAGTaGGTCAGCGTGACCGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RNQVVQTTCACCEGTVLWKRAWQ*VSVTGG Trigger: TCCTCCGGTCACGCTGACCAACTGCCAAGCTCGCTT...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR CCA 72 bp | TGCCTTCCATGCAACACAAATCCCAGTGACTCACGATaGGACCTCACAGGTAGGAGCCACCAATTCAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CLPCNTNPSDSR*DLTGRSHQFKP Trigger: GGGCTTGAATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGCATGGAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGATGGACAGCTGGGCCTTaGGAGCTGAGTGATCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSIFRDSFFNHFGAGDFRWTAGP*ELSDPV Trigger: GACTGGATCACTCAGCTCCAAAGGCCCAGCTGTCCA...TCTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR CCA 72 bp | CAGCTTCTCATAGTACAAGTTACAGTGTCTGATGTATaGGGCAGGGGCCAGCTGAGCAGTCAGCAAACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QLLIVQVTVSDV*GRGQLSSQQTS Trigger: AGAGGTTTGCTGACTGCTCAGCTGGCCCCTGCCCCATACATCAGACACTGTAACTTGTACTATGAGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAATCAAAAGCCTCTCTGTCAGGTATGAAAGTGTATGTGTTGGACAGCTGAAGCGAGCTTGGCAGTaGGTCAGCGTGACCGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TEIKSLSVRYESVCVGQLKRAWQ*VSVTGG Trigger: TCCTCCGGTCACGCTGACCAACTGCCAAGCTCGCTT...CAGCTGTCCAACACATACACTTTCATACCTGACAGAGAGGCTTTTGATTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | CAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATaGATCTCAAACAAACACCTTCTCCTCTGGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QLWGSQETLQVE*ISNKHLLLWQH Trigger: ATGCTGCCAGAGGAGAAGGTGTTTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR TCA 72 bp | AAGTTACAGTGTCTGATGTATGGGGCAGGGGCCAGCTaGGCAGTCAGCAAACCTCTGTACAAGCAATACTGT | + |
|
Preference number: 3 (lower is better) Translates to: KLQCLMYGAGAS*AVSKPLYKQYC Trigger: ACAGTATTGCTTGTACAGAGGTTTGCTGACTGCTCAGCTGGCCCCTGCCCCATACATCAGACACTGTAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | GTGTATGTGTTGGACAGCTGGGCCTTTGGAGCTGAGTaGTCCAGTCTTTACCTTTCCTGGGACGTTAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VYVLDSWAFGAE*SSLYLSWDVKA Trigger: TGCTTTAACGTCCCAGGAAAGGTAAAGACTGGATCACTCAGCTCCAAAGGCCCAGCTGTCCAACACATACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR CCA 72 bp | CTCACAACCCTAAACAAATACAAACAAGAAGAGGGCTaGGTAGTACAGCTTCATCTGCTTCTCCCCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTTLNKYKQEEG*VVQLHLLLPHP Trigger: GGGGTGGGGGAGAAGCAGATGAAGCTGTACTACCCAGCCCTCTTCTTGTTTGTATTTGTTTAGGGTTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR CCA 72 bp | ATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTaGAATGAATCTCAAACAAACACCTTCTCCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IRSCGDPRRHFK*NESQTNTFSSG Trigger: GCCAGAGGAGAAGGTGTTTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| 3UTR GCA 72 bp | CTGCGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTaGTCTACAAACACATCTCTGCAGTTGTTTAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: LRRLDFQPQTSK*STNTSLQLFKL Trigger: TAATTTAAACAACTGCAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTAAGACCAGGGTAGCCTaGAACTCAGAGATCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQLCSCGLGLTCANKLCLKTRVA*NSEISL Trigger: CAGGCTGATCTCTGAGTTCAAGGCTACCCTGGTCTT...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR GCA 72 bp | AAAGGAAGCCATGGTATCCCTTGCAGGAGGAGAGATTaGAGGACAGGTACTGGAAACTTTTCACTAAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KGSHGIPCRRRD*RTGTGNFSLSC Trigger: ACAGCTTAGTGAAAAGTTTCCAGTACCTGTCCTGCAATCTCTCCTCCTGCAAGGGATACCATGGCTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR GCA 72 bp | ACTGAAGTTAGAGGCAAATATGAGCTACCATATGGATaGTGGGAACTGAACCCAGGTCCTCTGTTAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TEVRGKYELPYG*WELNPGPLLEQ Trigger: CTGCTCTAACAGAGGACCTGGGTTCAGTTCCCAGCATCCATATGGTAGCTCATATTTGCCTCTAACTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR CCA 72 bp | GAAGTTAGAGGCAAATATGAGCTACCATATGGATGCTaGGAACTGAACCCAGGTCCTCTGTTAGAGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EVRGKYELPYGC*ELNPGPLLEQT Trigger: TGTCTGCTCTAACAGAGGACCTGGGTTCAGTTCCCAGCATCCATATGGTAGCTCATATTTGCCTCTAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAAGAGCAGAGAATTGTaGGCTCAGGTAGCTAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQKSREL*AQVANN Trigger: ATTGTTAGCTACCTGAGCCAACAATTCTCTGCTCTT...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTATGAAAGTGTATGTGTaGGACAGCTGGGCCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQLCSCGLGLTCANKLCLMKVYV*DSWAFG Trigger: TCCAAAGGCCCAGCTGTCCAACACATACACTTTCAT...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | AGAGAATTGTTGGCTCAGGTAGCTAACAATACCCTATaGGTAACCAGTCCCTGGCACACATATGAGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: RELLAQVANNTL*VTSPWHTYEEF Trigger: GAATTCCTCATATGTGTGCCAGGGACTGGTTACTCATAGGGTATTGTTAGCTACCTGAGCCAACAATTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | GATGAAAACAGAAATCAAAAGCCTCTCTGTCAGGTATaGAAGTGTATGTGTTGGACAGCTGGGCCTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DENRNQKPLCQV*KCMCWTAGPLE Trigger: CTCCAAAGGCCCAGCTGTCCAACACATACACTTTCATACCTGACAGAGAGGCTTTTGATTTCTGTTTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | GTAAAGTCTGTAAATGTCTTCTGCAGAGTGCACAGATaGAAACAGAAATCAAAAGCCTCTCTGTCAGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: VKSVNVFCRVHR*KQKSKASLSGM Trigger: CATACCTGACAGAGAGGCTTTTGATTTCTGTTTTCATCTGTGCACTCTGCAGAAGACATTTACAGACTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | TCTTTGGTGGAATCTGACTCCCTCTTCTGGTGTGTCTaGAGACAGCTACAGTGTACTCATATATATAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SLVESDSLFWCV*RQLQCTHIYKI Trigger: TATTTTATATATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATTCCACCAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR TCA 72 bp | ATCACATTACTACGGAATAAAGTAATAATGAGTCTCTaGGAATACAAGTTAAGCCAACCACCTTGCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ITLLRNKVIMSL*EYKLSQPPCFQ Trigger: CTGGAAGCAAGGTGGTTGGCTTAACTTGTATTCTCAGAGACTCATTATTACTTTATTCCGTAGTAATGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACTAGGCTCTTATGATGTTGAGAAAAGTTTTTCAATAAAGATGACTCCTCCCCAAAAAGGAAACCGTTaGCCTGATATCAAAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KLGSYDVEKSFSIKMTPPQKGNR*PDIKSS Trigger: AGAACTTTTGATATCAGGCAAACGGTTTCCTTTTTG...GGGAGGAGTCATCTTTATTGAAAAACTTTTCTCAACATCATAAGAGCCTAGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGTGGGCCCTGGCTAGCTaGCTGGCAGAGAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRWALAS*LAERVA Trigger: GGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCA...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCCCCTGGCTAGCTGGCTaGCAGAGAGAGTCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTPWLAG*QRESPR Trigger: CCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGG...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGCCCTGGCTAGCTGGCTaGCAGAGAGAGTCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRDRRRGALQNLWDGRDGPWLAG*QRESPR Trigger: CCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGG...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCTGGGCCCTGGCTAGCTaGCTGGCAGAGAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTWALAS*LAERVA Trigger: GGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCA...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGTGGGCCCTGGCTAGCTaGCTGGCAGAGAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDRRRGALQNLWDGRDGWALAS*LAERVA Trigger: GGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCA...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRVGRKP*GFVSGP Trigger: GGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCAC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGGCTCCCCCTTGGGCTaGTCTGCCTCACTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRGSPLG*SASLDV Trigger: TACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDRRRGALQNLWDGRDGVGRKP*GFVSGP Trigger: GGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCAC...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGCTCCCCCTTGGGCTaGTCTGCCTCACTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTGSPLG*SASLDV Trigger: TACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGTTTGTCTCTGGGCCCTaGCTAGCTGGCTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRFVSGP*LAGWQR Trigger: TCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAA...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR CAA 72 bp | GGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTaGGTCAGCGTGACCGGAGGAGAGGAGCCCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTVLWAAKRAWQ*VSVTGGEEPFR Trigger: TCTGAAGGGCTCCTCTCCTCCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGCCCTTGCCAGTTATCTaGTCGAGCTGGCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRPLPVI*SSWPLS Trigger: AGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGG...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGTCCCCGAAGCACCCTTaGCAGTTATCTGCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRSPKHP*QLSARA Trigger: AGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGA...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTCCCTGGCTAGCTGGCTaGCAGAGAGAGTCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPPWLAG*QRESPR Trigger: CCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGG...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTTGGGCCCTGGCTAGCTaGCTGGCAGAGAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPWALAS*LAERVA Trigger: GGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCA...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFVGRKP*GFVSGP Trigger: GGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCAC...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGGTCCATCTTGGGCCGTaGGGAGGAAGCCATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPVHLGP*GGSHGG Trigger: ACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGAC...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGACCCTCTCTGCTTCATaGAGGCTGTCTTCCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRTLSAS*RLSSLG Trigger: CCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGT...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR TCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGCCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRPDFFS*NVPEAP Trigger: GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGG...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRDRRRGALQNLWDGRDGSAWIS*APTISG Trigger: CCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGA...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR GCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCGGCTCCCCCTTGGGCTaGTCTGCCTCACTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFGSPLG*SASLDV Trigger: TACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTGTCCATCTTGGGCCGTaGGGAGGAAGCCATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPVHLGP*GGSHGG Trigger: ACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGAC...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPLTFPL*AAGTFR Trigger: GCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAG...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCCCACCCCCTCTTTCTTTCAGACAGGGTTTCTCTGGCTGTCGGTCTTGGCCTTGGGTaGAGCTTTCTTAGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPHPLFLSDRVSLAVGLGLG*SFLRQR Trigger: CCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACC...GACAGCCAGAGAAACCCTGTCTGAAAGAAAGAGGGGGTGGGGGAGGGAGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| CDS-3UTR CCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGCTTCCTTTCGTGCACTaGCTATGGGCTTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRLPFVH*LWAFWR Trigger: CCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAG...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGCCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDRRRGALQNLWDGRDGPDFFS*NVPEAP Trigger: GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGG...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR TCA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCAGGCTTCTTGATGACTaGGGGAGAGGGTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTRLLDD*GRGSGF Trigger: AAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCT...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGCCCTGGCTAGCTGGCTaGCAGAGAGAGTCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWPWLAG*QRESPR Trigger: CCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGG...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCTTTGTCTCTGGGCCCTaGCTAGCTGGCTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFFVSGP*LAGWQR Trigger: TCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAA...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTATGGGGGTTTGTCTCTaGGCCCTGGCTAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPMGVCL*ALASWL Trigger: CAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCAT...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAVGRKP*GFVSGP Trigger: GGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCAC...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAGTCCATCTTGGGCCGTaGGGAGGAAGCCATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAVHLGP*GGSHGG Trigger: ACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGAC...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGTTAGAGTTGGCCCCTaGGTGGTTCTCCAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: QRDRRRGALQNLWDGRDGVRVGP*VVLQDI Trigger: TATGTCCTGGAGAACCACCCAGGGGCCAACTCTAAC...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCGGTCTTGGCCTTGGGTaGAGCTTTCTTAGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFGLGLG*SFLRQR Trigger: CCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACC...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTAGGGTCTGGCTTTCCTaGCAGGGGTCTTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPRVWLS*QGSWPW Trigger: CCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCT...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTGAGGGAGAGGGTCTaGCTTTCCTGGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLLRERV*LSWQGS Trigger: AGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTCTGAGGGAGAGGGTCTaGCTTTCCTGGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPLRERV*LSWQGS Trigger: AGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCCTTCCTTTCGTGCACTaGCTATGGGCTTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTLPFVH*LWAFWR Trigger: CCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAG...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGGCTGGAAGGTGCCGCTaGACCCCTTCCCAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLAGRCR*TPSQRS Trigger: AGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGC...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAGCTGGAAGGTGCCGCTaGACCCCTTCCCAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAAGRCR*TPSQRS Trigger: AGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGC...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGGGCTCCCCCTTGGGCTaGTCTGCCTCACTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLGSPLG*SASLDV Trigger: TACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCTCCCCGAAGCACCCTTaGCAGTTATCTGCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFSPKHP*QLSARA Trigger: AGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGA...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGGGCTTCGACCCTCTCTaGTTCATGGAGGCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPGFDPL*FMEAVF Trigger: GAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCC...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGCGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRRSYYK*ECLRMD Trigger: ATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCG...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCCTAACTTGTCCGCGTaGATCAGCTGCGCTCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFPNLSA*ISCAPT Trigger: AGTAGGAGCGCAGCTGATCCACGCGGACAAGTTAGG...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTTTTGTCTCTGGGCCCTaGCTAGCTGGCTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPFVSGP*LAGWQR Trigger: TCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAA...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGATGGGGGTTTGTCTCTaGGCCCTGGCTAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLMGVCL*ALASWL Trigger: CAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCAT...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSVGRKP*GFVSGP Trigger: GGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCAC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAAGGGTCTGGCTTTCCTaGCAGGGGTCTTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMARVWLS*QGSWPW Trigger: CCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCT...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCACTGAGGGAGAGGGTCTaGCTTTCCTGGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMALRERV*LSWQGS Trigger: AGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGCTGAGGGAGAGGGTCTaGCTTTCCTGGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLLRERV*LSWQGS Trigger: AGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCTTCGTGCACTGGCTATaGGCTTTCTGGAGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFFVHWL*AFWRSS Trigger: GGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAA...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCCCACCCCCTCTTTCTTTCAGACAGGGTTTCTCTGGCTGTCCTTCCTTTCGTGCACTaGCTATGGGCTTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPHPLFLSDRVSLAVLPFVH*LWAFWR Trigger: CCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAG...GACAGCCAGAGAAACCCTGTCTGAAAGAAAGAGGGGGTGGGGGAGGGAGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGGAGGCGCCAGTCTTCTaGAAGCTTGCCTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPEAPVF*KLALMA Trigger: GGCCATTAAGGCAAGCTTCCAGAAGACTGGCGCCTC...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCGAGGCGCCAGTCTTCTaGAAGCTTGCCTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFEAPVF*KLALMA Trigger: GGCCATTAAGGCAAGCTTCCAGAAGACTGGCGCCTC...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGCCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPPDFFS*NVPEAP Trigger: GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGG...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGGCTGGAAGGTGCCGCTaGACCCCTTCCCAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWAGRCR*TPSQRS Trigger: AGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGC...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATGCTGGAAGGTGCCGCTaGACCCCTTCCCAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNAGRCR*TPSQRS Trigger: AGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGC...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGAGGCTTCTTGATGACTaGGGGAGAGGGTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPRLLDD*GRGSGF Trigger: AAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCT...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLSAWIS*APTISG Trigger: CCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGA...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGGCTCCCCCTTGGGCTaGTCTGCCTCACTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSGSPLG*SASLDV Trigger: TACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGGACCACAACAAAACTaGCAGATGCACCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRGPQQN*QMHLFL Trigger: AAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCCCTTGCCAGTTATCTaGTCGAGCTGGCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLPLPVI*SSWPLS Trigger: AGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGG...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTGGCTTCGACCCTCTCTaGTTCATGGAGGCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPGFDPL*FMEAVF Trigger: GAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCC...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGATGGGGGTTTGTCTCTaGGCCCTGGCTAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWMGVCL*ALASWL Trigger: CAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCAT...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCGAGTTGGCCCCTGGGTaGTTCTCCAGGACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLELAPG*FSRTYF Trigger: GAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTC...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGGTTAGAGTTGGCCCCTaGGTGGTTCTCCAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPVRVGP*VVLQDI Trigger: TATGTCCTGGAGAACCACCCAGGGGCCAACTCTAAC...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCACCCTCTCTGCTTCATaGAGGCTGTCTTCCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLTLSAS*RLSSLG Trigger: CCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGT...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSLTFPL*AAGTFR Trigger: GCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAG...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWLTFPL*AAGTFR Trigger: GCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAG...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNLTFPL*AAGTFR Trigger: GCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAG...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAGGTCTTGGCCTTGGGTaGAGCTTTCTTAGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAGLGLG*SFLRQR Trigger: CCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACC...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCAGGGTCTGGCTTTCCTaGCAGGGGTCTTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSRVWLS*QGSWPW Trigger: CCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCT...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATAGGGTCTGGCTTTCCTaGCAGGGGTCTTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNRVWLS*QGSWPW Trigger: CCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCTTCGTGCACTGGCTATaGGCTTTCTGGAGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLFVHWL*AFWRSS Trigger: GGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAA...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTCCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPPDFFS*NVPEAP Trigger: GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGG...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCCCCTTCAGCAAGTTTaGTTTTGGGTGGAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFPLQQV*FWVEFP Trigger: GGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGG...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGCCCTTGCCAGTTATCTaGTCGAGCTGGCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLPLPVI*SSWPLS Trigger: AGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGG...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGTCCCCGAAGCACCCTTaGCAGTTATCTGCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLSPKHP*QLSARA Trigger: AGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGA...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCATCCCCGAAGCACCCTTaGCAGTTATCTGCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMASPKHP*QLSARA Trigger: AGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGA...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRNGRQD*IFHQAS Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAGGCTTCGACCCTCTCTaGTTCATGGAGGCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAGFDPL*FMEAVF Trigger: GAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCC...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAATGGGCCCTGGCTAGCTaGCTGGCAGAGAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQWALAS*LAERVA Trigger: GGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCA...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGTTTGTCTCTGGGCCCTaGCTAGCTGGCTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWFVSGP*LAGWQR Trigger: TCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAA...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGGTTATCTGCTCGAGCTaGCCTCTCTCTACTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLVICSS*PLSTAR Trigger: GCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAAC...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGACCCTCTCTGCTTCATaGAGGCTGTCTTCCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLTLSAS*RLSSLG Trigger: CCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGT...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGGGTCTTGGCCTTGGGTaGAGCTTTCTTAGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWGLGLG*SFLRQR Trigger: CCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACC...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAACTGAGGGAGAGGGTCTaGCTTTCCTGGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQLRERV*LSWQGS Trigger: AGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCATTCGTGCACTGGCTATaGGCTTTCTGGAGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAFVHWL*AFWRSS Trigger: GGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAA...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGCTGTTTTTGGATTTCTaGGGTGGTTTTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDSALGSKASLAVGQRDRLFLDF*GGFDFW Trigger: CCAGAAATCAAAACCACCTCAGAAATCCAAAAACAG...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCCCCTTCAGCAAGTTTaGTTTTGGGTGGAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLPLQQV*FWVEFP Trigger: GGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGG...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDRRRGALQNLWDGRDGNGRQD*IFHQAS Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGGCTTCGACCCTCTCTaGTTCATGGAGGCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSGFDPL*FMEAVF Trigger: GAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTCATGTGGAGTCCATCTTGGGCCGTaGGGAGGAAGCCATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSGVYTGLDFLQLCSCGVHLGP*GGSHGG Trigger: ACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGAC...TCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGTTTTACTTGTGGTTCTaGATCCAGAGCCGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPFYLWF*IQSRAL Trigger: AAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAA...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGTTATCTGCTCGAGCTaGCCTCTCTCTACTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSVICSS*PLSTAR Trigger: GCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAAC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATGAGTTGGCCCCTGGGTaGTTCTCCAGGACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNELAPG*FSRTYF Trigger: GAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTC...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGACCCTCTCTGCTTCATaGAGGCTGTCTTCCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWTLSAS*RLSSLG Trigger: CCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGT...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGCCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWPDFFS*NVPEAP Trigger: GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGG...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATAGGCTTCTTGATGACTaGGGGAGAGGGTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNRLLDD*GRGSGF Trigger: AAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCAGGCTTCTTGATGACTaGGGGAGAGGGTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSRLLDD*GRGSGF Trigger: AAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCT...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCGGACCACAACAAAACTaGCAGATGCACCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFGPQQN*QMHLFL Trigger: AAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCC...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAGGCTTCGACCCTCTCTaGTTCATGGAGGCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQGFDPL*FMEAVF Trigger: GAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCC...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGCCTTCTCATCCTTTTTaGGTTCCTCAGCAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPPSHPF*VPQQTC Trigger: ACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGG...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCCTTCTCATCCTTTTTaGGTTCCTCAGCAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFPSHPF*VPQQTC Trigger: ACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGG...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCATGGGCCCTGGCTAGCTaGCTGGCAGAGAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPWALAS*LAERVA Trigger: GGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCA...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQVGRKP*GFVSGP Trigger: GGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCAC...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTTTTTACTTGTGGTTCTaGATCCAGAGCCGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPFYLWF*IQSRAL Trigger: AAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAA...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGTTAGAGTTGGCCCCTaGGTGGTTCTCCAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSVRVGP*VVLQDI Trigger: TATGTCCTGGAGAACCACCCAGGGGCCAACTCTAAC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATGTTAGAGTTGGCCCCTaGGTGGTTCTCCAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNVRVGP*VVLQDI Trigger: TATGTCCTGGAGAACCACCCAGGGGCCAACTCTAAC...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGTCTGTAAGCTCCTCTTaGGTGGTGGTTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLSVSSS*VVVPHP Trigger: AGGATGAGGAACCACCACCCAAGAGGAGCTTACAGA...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCCTTCCTTTCGTGCACTaGCTATGGGCTTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSLPFVH*LWAFWR Trigger: CCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAG...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGTACTATAAGTGGGAGTaGCTTAGGATGGATGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPYYKWE*LRMDEF Trigger: GAACTCATCCATCCTAAGGCACTCCCACTTATAGTA...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGGGCTCCCCCTTGGGCTaGTCTGCCTCACTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQGSPLG*SASLDV Trigger: TACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCACGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMARSYYK*ECLRMD Trigger: ATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCG...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGAAGTTTGCTTTTGGGTaGAGTTTCCCGGGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPKFAFG*SFPGRI Trigger: AATTCTACCCGGGAAACTCCACCCAAAAGCAAACTT...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAATTTGTCTCTGGGCCCTaGCTAGCTGGCTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQFVSGP*LAGWQR Trigger: TCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAA...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAGTCCATCTTGGGCCGTaGGGAGGAAGCCATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPVHLGP*GGSHGG Trigger: ACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGAC...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCATTTTACTTGTGGTTCTaGATCCAGAGCCGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAFYLWF*IQSRAL Trigger: AAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAA...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGGCATTCTTCAACAACTaGGGCCTGATGTCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWAFFNN*GLMSTL Trigger: CAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGC...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATGCATTCTTCAACAACTaGGGCCTGATGTCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNAFFNN*GLMSTL Trigger: CAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGC...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAGCCTGTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGGTTATCTGCTCGAGCTaGCCTCTCTCTACTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HQACPFWGVYRTRFPAVMVICSS*PLSTAR Trigger: GCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAAC...CATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGACAGGCTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGTTCATGGCAGCAATaGCAGACAAGATTGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: GGEEPFRIYGMAGTGASFRSWQQ*QTRLHI Trigger: AATATGCAATCTTGTCTGCCATTGCTGCCATGAACG...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAGTTAGAGTTGGCCCCTaGGTGGTTCTCCAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQVRVGP*VVLQDI Trigger: TATGTCCTGGAGAACCACCCAGGGGCCAACTCTAAC...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGTCTGTAAGCTCCTCTTaGGTGGTGGTTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWSVSSS*VVVPHP Trigger: AGGATGAGGAACCACCACCCAAGAGGAGCTTACAGA...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQLTFPL*AAGTFR Trigger: GCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAG...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGACTGAGGGAGAGGGTCTaGCTTTCCTGGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSIFRDSFFNHFGAGDFRLRERV*LSWQGS Trigger: AGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG...TCTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAACTTCCTTTCGTGCACTaGCTATGGGCTTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQLPFVH*LWAFWR Trigger: CCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAG...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGCTGTTTTTGGATTTCTaGGGTGGTTTTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGALQNLWDGRDGGFFPLFLDF*GGFDFW Trigger: CCAGAAATCAAAACCACCTCAGAAATCCAAAAACAG...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCTACTATAAGTGGGAGTaGCTTAGGATGGATGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLYYKWE*LRMDEF Trigger: GAACTCATCCATCCTAAGGCACTCCCACTTATAGTA...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAACCCCTTCAGCAAGTTTaGTTTTGGGTGGAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQPLQQV*FWVEFP Trigger: GGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGG...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAACCCTTGCCAGTTATCTaGTCGAGCTGGCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQPLPVI*SSWPLS Trigger: AGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGG...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTCATGTGGACCCTTGCCAGTTATCTaGTCGAGCTGGCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLSGVYTGLDFLQLCSCGPLPVI*SSWPLS Trigger: AGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGG...TCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLNGRQD*IFHQAS Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGCGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWRSYYK*ECLRMD Trigger: ATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCG...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCACCTTCTCATCCTTTTTaGGTTCCTCAGCAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DEQREQGSHTVSEVQVMAPSHPF*VPQQTC Trigger: ACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGG...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGCCTTCTCATCCTTTTTaGGTTCCTCAGCAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLPSHPF*VPQQTC Trigger: ACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGG...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAATGGGGGTTTGTCTCTaGGCCCTGGCTAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPMGVCL*ALASWL Trigger: CAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCAT...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGTTTTACTTGTGGTTCTaGATCCAGAGCCGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWFYLWF*IQSRAL Trigger: AAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAA...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAGCATTCTTCAACAACTaGGGCCTGATGTCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQAFFNN*GLMSTL Trigger: CAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGC...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAAGTTATCTGCTCGAGCTaGCCTCTCTCTACTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQVICSS*PLSTAR Trigger: GCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAAC...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTCGTTCATGGCAGCAATaGCAGACAAGATTGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPRSWQQ*QTRLHI Trigger: AATATGCAATCTTGTCTGCCATTGCTGCCATGAACG...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAAGAGTTGGCCCCTGGGTaGTTCTCCAGGACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQELAPG*FSRTYF Trigger: GAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTC...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTCATGTGGAGAGTTGGCCCCTGGGTaGTTCTCCAGGACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLSGVYTGLDFLQLCSCGELAPG*FSRTYF Trigger: GAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTC...TCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGTCTTCCCTTGGGACTTaGCTGGTGTTTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLSSLGT*LVFSSV Trigger: TACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGA...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAGGTCTTGGCCTTGGGTaGAGCTTTCTTAGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSIFRDSFFNHFGAGDFRGLGLG*SFLRQR Trigger: CCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACC...TCTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAATTCGTGCACTGGCTATaGGCTTTCTGGAGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQFVHWL*AFWRSS Trigger: GGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAA...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| 3UTR CAA 72 bp | CTCTGGCTGTCACTCACTCTAAAGACCAGGGTAGCCTaGAACTCAGAGATCAGCCTGCTTCTGACTCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLSLTLKTRVA*NSEISLLLTPK Trigger: CTTAGGAGTCAGAAGCAGGCTGATCTCTGAGTTCAAGGCTACCCTGGTCTTTAGAGTGAGTGACAGCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR TCA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCTTTCTGAGGTGGTTTTaGTTTCTGGACCACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTALASLQAGRKAFPTLLFLRWF*FLDHNK Trigger: TTTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAA...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTTTTCTGAGGTGGTTTTaGTTTCTGGACCACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPFLRWF*FLDHNK Trigger: TTTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAA...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTCTGTTTTTGGATTTCTaGGGTGGTTTTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPLFLDF*GGFDFW Trigger: CCAGAAATCAAAACCACCTCAGAAATCCAAAAACAG...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGCTGGAAGGTGCCGCTaGACCCCTTCCCAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIAGRCR*TPSQRS Trigger: AGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGGACCACAACAAAACTaGCAGATGCACCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSGPQQN*QMHLFL Trigger: AAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLNGRQD*IFHQAS Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGCCTTCTCATCCTTTTTaGGTTCCTCAGCAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWPSHPF*VPQQTC Trigger: ACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGG...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAATTTTACTTGTGGTTCTaGATCCAGAGCCGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQFYLWF*IQSRAL Trigger: AAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAA...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGTCTTCCCTTGGGACTTaGCTGGTGTTTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWSSLGT*LVFSSV Trigger: TACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGA...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCTCTTCCCTTGGGACTTaGCTGGTGTTTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSSSLGT*LVFSSV Trigger: TACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGA...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTILTFPL*AAGTFR Trigger: GCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAG...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCTACTATAAGTGGGAGTaGCTTAGGATGGATGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSYYKWE*LRMDEF Trigger: GAACTCATCCATCCTAAGGCACTCCCACTTATAGTA...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCATCCCCGAAGCACCCTTaGCAGTTATCTGCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPSPKHP*QLSARA Trigger: AGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGA...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGAAGTTTGCTTTTGGGTaGAGTTTCCCGGGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RNQVVQTTCACCEGTVLWKFAFG*SFPGRI Trigger: AATTCTACCCGGGAAACTCCACCCAAAAGCAAACTT...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATAAGTTTGCTTTTGGGTaGAGTTTCCCGGGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNKFAFG*SFPGRI Trigger: AATTCTACCCGGGAAACTCCACCCAAAAGCAAACTT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCCGTTCATGGCAGCAATaGCAGACAAGATTGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: IQAQALSPFPSHTQLWGSRSWQQ*QTRLHI Trigger: AATATGCAATCTTGTCTGCCATTGCTGCCATGAACG...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAGAGTTGGCCCCTGGGTaGTTCTCCAGGACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPELAPG*FSRTYF Trigger: GAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTC...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGGTCTTGGCCTTGGGTaGAGCTTTCTTAGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIGLGLG*SFLRQR Trigger: CCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCATTCGTGCACTGGCTATaGGCTTTCTGGAGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPFVHWL*AFWRSS Trigger: GGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAA...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATTTTCTGAGGTGGTTTTaGTTTCTGGACCACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ATQIPVTHDGTSQVGATNFLRWF*FLDHNK Trigger: TTTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAA...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGCCCCTTCAGCAAGTTTaGTTTTGGGTGGAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQPLQQV*FWVEFP Trigger: GGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGG...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| CDS-3UTR GCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTTCCCCGAAGCACCCTTaGCAGTTATCTGCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTISPKHP*QLSARA Trigger: AGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGA...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR GCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGGCTTCGACCCTCTCTaGTTCATGGAGGCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIGFDPL*FMEAVF Trigger: GAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAAAGTTTGCTTTTGGGTaGAGTTTCCCGGGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: AIRSCGDPRRHFKWNESQKFAFG*SFPGRI Trigger: AATTCTACCCGGGAAACTCCACCCAAAAGCAAACTT...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGTTATCTGCTCGAGCTaGCCTCTCTCTACTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIVICSS*PLSTAR Trigger: GCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAAC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGAGTTGGCCCCTGGGTaGTTCTCCAGGACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIELAPG*FSRTYF Trigger: GAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTACCCTCTCTGCTTCATaGAGGCTGTCTTCCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTITLSAS*RLSSLG Trigger: CCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGT...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGAGGCGCCAGTCTTCTaGAAGCTTGCCTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIEAPVF*KLALMA Trigger: GGCCATTAAGGCAAGCTTCCAGAAGACTGGCGCCTC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 |
||
| CDS-3UTR GCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCACCCCTTCAGCAAGTTTaGTTTTGGGTGGAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPPLQQV*FWVEFP Trigger: GGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGG...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAAGGACCACAACAAAACTaGCAGATGCACCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQGPQQN*QMHLFL Trigger: AAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCC...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAGCCTGTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQACPFWGVYRTRFPAVMNGRQD*IFHQAS Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...CATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGACAGGCTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGTTTTACTTGTGGTTCTaGATCCAGAGCCGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQFYLWF*IQSRAL Trigger: AAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAA...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAGCATTCTTCAACAACTaGGGCCTGATGTCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPAFFNN*GLMSTL Trigger: CAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGC...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | TCCTACCCTAAACTTTTGTTAAGGCGCATTCAGAGCAGAGAGAGAGACCTTACATCTGTAAGCTCCTCTTaGGTGGTGGTTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SYPKLLLRRIQSRERDLTSVSSS*VVVPHP Trigger: AGGATGAGGAACCACCACCCAAGAGGAGCTTACAGA...TGTAAGGTCTCTCTCTCTGCTCTGAATGCGCCTTAACAAAAGTTTAGGGTAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAGCCTGTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTGTTTTTGGATTTCTaGGGTGGTTTTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQACPFWGVYRTRFPAVMLFLDF*GGFDFW Trigger: CCAGAAATCAAAACCACCTCAGAAATCCAAAAACAG...CATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGACAGGCTTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTCCCCTTCAGCAAGTTTaGTTTTGGGTGGAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIPLQQV*FWVEFP Trigger: GGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGG...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CCA 90 bp | AAACTAGGCTCTTATGATGTTGAGAAAAGTTTTTCAATAAAGATGACTCCTCCCATGGGGGTTTGTCTCTaGGCCCTGGCTAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLGSYDVEKSFSIKMTPPMGVCL*ALASWL Trigger: CAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCAT...GGGAGGAGTCATCTTTATTGAAAAACTTTTCTCAACATCATAAGAGCCTAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAACGTTCATGGCAGCAATaGCAGACAAGATTGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQRSWQQ*QTRLHI Trigger: AATATGCAATCTTGTCTGCCATTGCTGCCATGAACG...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAATTTCTGAGGTGGTTTTaGTTTCTGGACCACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQFLRWF*FLDHNK Trigger: TTTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAA...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR GCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAGGACCACAACAAAACTaGCAGATGCACCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPGPQQN*QMHLFL Trigger: AAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCC...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR GCA 90 bp | TCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGAAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFRDSFFNHFGAGDFRNGRQD*IFHQAS Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...TCTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCATCTTCCCTTGGGACTTaGCTGGTGTTTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPSSLGT*LVFSSV Trigger: TACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGA...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTCCTTCTCATCCTTTTTaGGTTCCTCAGCAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIPSHPF*VPQQTC Trigger: ACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGG...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCACGTTCATGGCAGCAATaGCAGACAAGATTGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPRSWQQ*QTRLHI Trigger: AATATGCAATCTTGTCTGCCATTGCTGCCATGAACG...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTTCTTCCCTTGGGACTTaGCTGGTGTTTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTISSLGT*LVFSSV Trigger: TACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGA...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTTCTTCCCTTGGGACTTaGCTGGTGTTTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LQLCSCGLGLTCANKLCLSSLGT*LVFSSV Trigger: TACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGA...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAATCAAAAGCCTCTCTGTCAGGTATGAAAGTGTATGTGTTGGACAGCTGAAGTTTGCTTTTGGGTaGAGTTTCCCGGGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: TEIKSLSVRYESVCVGQLKFAFG*SFPGRI Trigger: AATTCTACCCGGGAAACTCCACCCAAAAGCAAACTT...CAGCTGTCCAACACATACACTTTCATACCTGACAGAGAGGCTTTTGATTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| CDS-3UTR TCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTTTTCTGAGGTGGTTTTaGTTTCTGGACCACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIFLRWF*FLDHNK Trigger: TTTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAA...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTCTGTTTTTGGATTTCTaGGGTGGTTTTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSIPSHNAHMGRKSTILFLDF*GGFDFW Trigger: CCAGAAATCAAAACCACCTCAGAAATCCAAAAACAG...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CCA 90 bp | AAACTAGGCTCTTATGATGTTGAGAAAAGTTTTTCAATAAAGATGACTCCTCCCCGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLGSYDVEKSFSIKMTPPRSYYK*ECLRMD Trigger: ATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCG...GGGAGGAGTCATCTTTATTGAAAAACTTTTCTCAACATCATAAGAGCCTAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105827.8 |
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| CDS CCA 90 bp | GCGTCCATCTTGGGCCGTGGGGAGGAAGCCATGGGGGTTTGTCTCTaGGCCCTGGCTAGCTGGCTGGCAGAGAGAGTCGCCCAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASILGRGEEAMGVCL*ALASWLAERVAQAG Trigger: TCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000165861.8 |
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| CDS CCA 90 bp | TCTTGGGCCGTGGGGAGGAAGCCATGGGGGTTTGTCTCTGGGCCCTaGCTAGCTGGCTGGCAGAGAGAGTCGCCCAGGCAGGAATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWAVGRKPWGFVSGP*LAGWQRESPRQESS Trigger: AGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 90 bp | GCCTTGGGTGGAGCTTTCTTAGGCAGCGGCCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGCGCAGGCTTCGACCCTCTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALGGAFLGSGLTFPL*AAGTFRAGFDPLCF Trigger: GAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGCAGGGGTCTTGGCCTaGGGTGGAGCTTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GDSALGSKASLAVGQRDRAGVLA*GGAFLG Trigger: GCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGCAGGGGTCTTGGCCTaGGGTGGAGCTTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRDRRRGALQNLWDGRDGAGVLA*GGAFLG Trigger: GCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGC...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS GCA 90 bp | CCTCTCTGGGCAGCCGGGACTTTCCGCGCAGGCTTCGACCCTCTCTaGTTCATGGAGGCTGTCTTCCCTTGGGACTTGGCTGGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLWAAGTFRAGFDPL*FMEAVFPWDLAGVF Trigger: GAAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS CCA 90 bp | CCTCAGTTAAGATTGCGTCCATCTTGGGCCGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCCTGGCTAGCTGGCTGGCAGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQLRLRPSWAVGRKP*GFVSGPWLAGWQRE Trigger: CTCTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGGAGGCTGTCTTCCCTaGGGACTTGGCTGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GDSALGSKASLAVGQRDRGGCLP*GLGWCF Trigger: AAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCCTCCCCCACCCCCTCTTTCTTTCAGACAGGGTTTCTCTGGCTGTCGCAGGGGTCTTGGCCTaGGGTGGAGCTTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSLPHPLFLSDRVSLAVAGVLA*GGAFLG Trigger: GCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGC...GACAGCCAGAGAAACCCTGTCTGAAAGAAAGAGGGGGTGGGGGAGGGAGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCTGGCCTCAGTTAAGATaGCGTCCATCTTGGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTWPQLR*RPSWAV Trigger: CACGGCCCAAGATGGACGCAATCTTAACTGAGGCCA...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCGTCCCCGAAGCACCCTaGCCAGTTATCTGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGEEPFRIYGMAGTGASFVPEAP*PVICSS Trigger: GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS CCA 90 bp | GGGAGGAAGCCATGGGGGTTTGTCTCTGGGCCCTGGCTAGCTGGCTaGCAGAGAGAGTCGCCCAGGCAGGAATCGTCTTTTTCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRKPWGFVSGPWLAG*QRESPRQESSFSLS Trigger: AGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 9 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 90 bp | GGGCAGCCGGGACTTTCCGCGCAGGCTTCGACCCTCTCTGCTTCATaGAGGCTGTCTTCCCTTGGGACTTGGCTGGTGTTTTCTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GQPGLSAQASTLSAS*RLSSLGTWLVFSSV Trigger: TACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGTCAGCAAGTTTGCTTTaGGGTGGAGTTTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GDSALGSKASLAVGQRDRSASLL*GGVSRV Trigger: TACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGA...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGTCCCCTTCAGCAAGTTaGCTTTTGGGTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDSALGSKASLAVGQRDRSPSAS*LLGGVS Trigger: GGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGA...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCCTCCCCCACCCCCTCTTTCTTTCAGACAGGGTTTCTCTGGCTGTCTGGCCTCAGTTAAGATaGCGTCCATCTTGGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPSLPHPLFLSDRVSLAVWPQLR*RPSWAV Trigger: CACGGCCCAAGATGGACGCAATCTTAACTGAGGCCA...GACAGCCAGAGAAACCCTGTCTGAAAGAAAGAGGGGGTGGGGGAGGGAGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| CDS-3UTR CAA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTGTCCCCGAAGCACCCTaGCCAGTTATCTGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPVPEAP*PVICSS Trigger: GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGTCTTCCCTTGGGACTaGGCTGGTGTTTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GDSALGSKASLAVGQRDRVFPWD*AGVFFC Trigger: ACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGAC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCGCAGGGGTCTTGGCCTaGGGTGGAGCTTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TTALASLQAGRKAFPTLLAGVLA*GGAFLG Trigger: GCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGC...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGGGTTCCTCAGCAGACTaGTTGTTGTTCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDSALGSKASLAVGQRDRGSSAD*LLFSSF Trigger: GAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACC...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGTGGCCTCAGTTAAGATaGCGTCCATCTTGGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRGALQNLWDGRDGGFFPWPQLR*RPSWAV Trigger: CACGGCCCAAGATGGACGCAATCTTAACTGAGGCCA...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGCTCTCTCTTCAGCGCTaGCTTGAGCAGATAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRGALQNLWDGRDGGFFPLSLQR*LEQIAP Trigger: AGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAG...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCTCTCTCTTCAGCGCTaGCTTGAGCAGATAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGEEPFRIYGMAGTGASFLSLQR*LEQIAP Trigger: AGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAG...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGGGAGGCTGTCTTCCCTaGGGACTTGGCTGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRGALQNLWDGRDGGFFPGGCLP*GLGWCF Trigger: AAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCC...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCCGCTCCCACTAGGCTTCTaGATGACTGAGGGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRGALQNLWDGRDGGFFPLPLGF*MTEGEG Trigger: ACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAG...CGGAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS GCA 90 bp | CCCTTGCCAGTTATCTGCTCGAGCTGGCCTCTCTCTACTGCTCGCTaGAGAGCATTCTTCAACAACTGGGGCCTGATGTCCACTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPVICSSWPLSTAR*RAFFNNWGLMSTLS Trigger: GCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
||
| CDS GCA 90 bp | CGAAGCACCCTTGCCAGTTATCTGCTCGAGCTGGCCTCTCTCTACTaGTCGCTGCAGAGCATTCTTCAACAACTGGGGCCTGATGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSTLASYLLELASLY*SLQSILQQLGPDVH Trigger: GTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGGTGCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATGTCCCCGAAGCACCCTaGCCAGTTATCTGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATQIPVTHDGTSQVGATNVPEAP*PVICSS Trigger: GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGTCCCCGAAGCACCCTaGCCAGTTATCTGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQAQALSPFPSHTQLWGSVPEAP*PVICSS Trigger: GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCGGAGGCTGTCTTCCCTaGGGACTTGGCTGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTALASLQAGRKAFPTLLGGCLP*GLGWCF Trigger: AAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCC...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTCTCCCACTAGGCTTCTaGATGACTGAGGGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPLPLGF*MTEGEG Trigger: ACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAG...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCGGATGGATGAGTTCACCTaGAGACATATCAGTTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GDSALGSKASLAVGQRDRMDEFT*RHISCH Trigger: ATGGCAACTGATATGTCTCAAGGTGAACTCATCCAT...CCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCTCAGCAAGTTTGCTTTaGGGTGGAGTTTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGEEPFRIYGMAGTGASFSASLL*GGVSRV Trigger: TACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGA...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCTCCCCTTCAGCAAGTTaGCTTTTGGGTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGEEPFRIYGMAGTGASFSPSAS*LLGGVS Trigger: GGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGA...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGTGGCCTCAGTTAAGATaGCGTCCATCTTGGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLWPQLR*RPSWAV Trigger: CACGGCCCAAGATGGACGCAATCTTAACTGAGGCCA...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGCTCTCTCTTCAGCGCTaGCTTGAGCAGATAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLLSLQR*LEQIAP Trigger: AGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAG...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGATCTTCCAGTTTTACTaGTGGTTCTGGATCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRDRRRGALQNLWDGRDGIFQFY*WFWIQS Trigger: GCTCTGGATCCAGAACCACAAGTAAAACTGGAAGAT...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAGTCCCCGAAGCACCCTaGCCAGTTATCTGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AIRSCGDPRRHFKWNESQVPEAP*PVICSS Trigger: GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGCAATGGCAGACAAGATaGCATATTCCATCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRDRRRGALQNLWDGRDGQWQTR*HIPSGF Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCCAATGGCAGACAAGATaGCATATTCCATCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTQWQTR*HIPSGF Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTTCCCCTTCAGCAAGTTaGCTTTTGGGTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPSPSAS*LLGGVS Trigger: GGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGA...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCTGGCCTCAGTTAAGATaGCGTCCATCTTGGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: IQAQALSPFPSHTQLWGSWPQLR*RPSWAV Trigger: CACGGCCCAAGATGGACGCAATCTTAACTGAGGCCA...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATCTCTCTCTTCAGCGCTaGCTTGAGCAGATAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ATQIPVTHDGTSQVGATNLSLQR*LEQIAP Trigger: AGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAG...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCCTCCCCCACCCCCTCTTTCTTTCAGACAGGGTTTCTCTGGCTGTCATCTTCCAGTTTTACTaGTGGTTCTGGATCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSLPHPLFLSDRVSLAVIFQFY*WFWIQS Trigger: GCTCTGGATCCAGAACCACAAGTAAAACTGGAAGAT...GACAGCCAGAGAAACCCTGTCTGAAAGAAAGAGGGGGTGGGGGAGGGAGGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
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| CDS-3UTR CAA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGGAGGCTGTCTTCCCTaGGGACTTGGCTGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IQAQALSPFPSHTQLWGSGGCLP*GLGWCF Trigger: AAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATCTCCCACTAGGCTTCTaGATGACTGAGGGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ATQIPVTHDGTSQVGATNLPLGF*MTEGEG Trigger: ACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAG...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS TCA 90 bp | GCAGATAGCCCCTTCTCTCCAGACCCAGAGACGGGTACTTATGAATaGTGTACTTTCGAATCGCAACCACCGAGGCGCCAGTCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ADSPFSPDPETGTYE*CTFESQPPRRQSSG Trigger: TCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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| CDS CCA 90 bp | CTCAGGCTCCCCCTTGGGCTGCTCTGCCTCACTGGATGTAGCAGGTaGAGTCTCATTCTCCTGTTCTTCTACAGTAGAGATAGATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRLPLGLLCLTGCSR*SLILLFFYSRDRFL Trigger: GAGGAATCTATCTCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000137851.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCTGGTTCCTCAGCAGACTaGTTGTTGTTCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSKSAGRTQSLPNTAPGSSAD*LLFSSF Trigger: GAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACC...AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAACTCTCTCTTCAGCGCTaGCTTGAGCAGATAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AIRSCGDPRRHFKWNESQLSLQR*LEQIAP Trigger: AGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAG...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | CAGCGTGACCGGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGATTTCTGAGGTGGTTTaGATTTCTGGACCACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: QRDRRRGALQNLWDGRDGISEVV*ISGPQQ Trigger: TTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAAT...CCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGACAGTGCTCTGGGCAGCAAAGCGAGCTTGGCAGTTGGTCAGCGTGACCATTTCTGAGGTGGTTTaGATTTCTGGACCACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: EGTVLWAAKRAWQLVSVTISEVV*ISGPQQ Trigger: TTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAAT...GGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGCACTGTCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAGTCTTCCCTTGGGACTaGGCTGGTGTTTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DEQREQGSHTVSEVQVMAVFPWD*AGVFFC Trigger: ACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGAC...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAGGAGGCTGTCTTCCCTaGGGACTTGGCTGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AIRSCGDPRRHFKWNESQGGCLP*GLGWCF Trigger: AAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCC...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS-3UTR CAA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAAGCAGGGGTCTTGGCCTaGGGTGGAGCTTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQAGVLA*GGAFLG Trigger: GCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGC...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGTCCCCTTCAGCAAGTTaGCTTTTGGGTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNQVVQTTCACCEGTVLWSPSAS*LLGGVS Trigger: GGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGA...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGTCCTTCTCATCCTTTTaGGGTTCCTCAGCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLSFSSF*GSSADL Trigger: CAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGA...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ACCACAGCTCTAGCAAGTCTGCAGGCAGGACGCAAAGCCTTCCCAACACTGCTCCAATGGCAGACAAGATaGCATATTCCATCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TTALASLQAGRKAFPTLLQWQTR*HIPSGF Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...GAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAGCCTGTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGGGAGGCTGTCTTCCCTaGGGACTTGGCTGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HQACPFWGVYRTRFPAVMGGCLP*GLGWCF Trigger: AAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCC...CATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGACAGGCTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS CCA 90 bp | ATAGGCATGGTGGTATCTTCTGCTTTCTCACCTAACTTGTCCGCGTaGATCAGCTGCGCTCCTACTATAAGTGGGAGTGCCTTAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: IGMVVSSAFSPNLSA*ISCAPTISGSALGW Trigger: CCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAATCAGCAAGTTTGCTTTaGGGTGGAGTTTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AIRSCGDPRRHFKWNESQSASLL*GGVSRV Trigger: TACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGA...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCGGTTCCTCAGCAGACTaGTTGTTGTTCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQAQALSPFPSHTQLWGSGSSAD*LLFSSF Trigger: GAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACC...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | AGAAACCAAGTGGTGCAGACAACTTGTGCTTGCTGTGAGGGGACAGTGCTCTGGTCCTTCTCATCCTTTTaGGGTTCCTCAGCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNQVVQTTCACCEGTVLWSFSSF*GSSADL Trigger: CAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGA...CCAGAGCACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGAGGAGCCCTTCAGAATCTATGGGATGGCAGGGACGGGGGCTTCTTTCATTTCTGAGGTGGTTTaGATTTCTGGACCACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: GGEEPFRIYGMAGTGASFISEVV*ISGPQQ Trigger: TTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAAT...GAAAGAAGCCCCCGTCCCTGCCATCCCATAGATTCTGAAGGGCTCCTCTCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GATGAACAGAGGGAGCAGGGCAGTCACACAGTCAGCGAAGTCCAGGTTATGGCAATCTTCCAGTTTTACTaGTGGTTCTGGATCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DEQREQGSHTVSEVQVMAIFQFY*WFWIQS Trigger: GCTCTGGATCCAGAACCACAAGTAAAACTGGAAGAT...TGCCATAACCTGGACTTCGCTGACTGTGTGACTGCCCTGCTCCCTCTGTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TCCTACCCTAAACTTTTGTTAAGGCGCATTCAGAGCAGAGAGAGAGACCTTACAGTCCCCGAAGCACCCTaGCCAGTTATCTGCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SYPKLLLRRIQSRERDLTVPEAP*PVICSS Trigger: GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC...TGTAAGGTCTCTCTCTCTGCTCTGAATGCGCCTTAACAAAAGTTTAGGGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAGTCTTCCCTTGGGACTaGGCTGGTGTTTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AIRSCGDPRRHFKWNESQVFPWD*AGVFFC Trigger: ACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGAC...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAACTCCCACTAGGCTTCTaGATGACTGAGGGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQLPLGF*MTEGEG Trigger: ACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAG...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS GCA 90 bp | GTGGTATCTTCTGCTTTCTCACCTAACTTGTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGGAGTGCCTTAGGATGGATGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VVSSAFSPNLSAWIS*APTISGSALGWMSS Trigger: TGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGATGGATGAGTTCACCTaGAGACATATCAGTTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLMDEFT*RHISCH Trigger: ATGGCAACTGATATGTCTCAAGGTGAACTCATCCAT...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GCCATACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAGGTTCCTCAGCAGACTaGTTGTTGTTCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AIRSCGDPRRHFKWNESQGSSAD*LLFSSF Trigger: GAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACC...TTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGCCCAAGCCTTAAGTCCATTTCCCAGCCATACGCAGCTGTGGGGATCCATCTTCCAGTTTTACTaGTGGTTCTGGATCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQAQALSPFPSHTQLWGSIFQFY*WFWIQS Trigger: GCTCTGGATCCAGAACCACAAGTAAAACTGGAAGAT...GGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GCAACACAAATCCCAGTGACTCACGATGGGACCTCACAGGTAGGAGCCACCAATATCTTCCAGTTTTACTaGTGGTTCTGGATCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATQIPVTHDGTSQVGATNIFQFY*WFWIQS Trigger: GCTCTGGATCCAGAACCACAAGTAAAACTGGAAGAT...ATTGGTGGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGCTCCCACTAGGCTTCTaGATGACTGAGGGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQLPLGF*MTEGEG Trigger: ACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAG...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS CCA 90 bp | TCTTCCCTTGGGACTTGGCTGGTGTTTTCTTCTGTAAGCTCCTCTTaGGTGGTGGTTCCTCATCCTCAGAGTCTTCTGATGATTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGTWLVFSSVSSS*VVVPHPQSLLMIHR Trigger: ACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTCATGTGGATCCCCTTCAGCAAGTTaGCTTTTGGGTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSGVYTGLDFLQLCSCGSPSAS*LLGGVS Trigger: GGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGA...TCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | TCCTACCCTAAACTTTTGTTAAGGCGCATTCAGAGCAGAGAGAGAGACCTTACATGGCCTCAGTTAAGATaGCGTCCATCTTGGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SYPKLLLRRIQSRERDLTWPQLR*RPSWAV Trigger: CACGGCCCAAGATGGACGCAATCTTAACTGAGGCCA...TGTAAGGTCTCTCTCTCTGCTCTGAATGCGCCTTAACAAAAGTTTAGGGTAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGTCTGGACTTCCAGCCCCAGACCTCTAAGTGCTCTACAAACACATCTCTGATTTCTGAGGTGGTTTaGATTTCTGGACCACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RRLDFQPQTSKCSTNTSLISEVV*ISGPQQ Trigger: TTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAAT...CAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGCTTTCTCACCTAACTaGTCCGCGTGGATCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIAFSPN*SAWISC Trigger: GCAGCTGATCCACGCGGACAAGTTAGGTGAGAAAGC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAAGGTTCCTCAGCAGACTaGTTGTTGTTCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQGSSAD*LLFSSF Trigger: GAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACC...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TACGCAGCTGTGGGGATCCCAGGAGACACTTCAAGTGGAATGAATCTCAAACAATCCTTCTCATCCTTTTaGGGTTCCTCAGCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: YAAVGIPGDTSSGMNLKQSFSSF*GSSADL Trigger: CAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGA...TTGTTTGAGATTCATTCCACTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTCTGGGGTGTATACAGGACTCGATTTCCTGCAGTTATGCTCATGTGGATCCTTCTCATCCTTTTaGGGTTCCTCAGCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLSGVYTGLDFLQLCSCGSFSSF*GSSADL Trigger: CAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGA...TCCACATGAGCATAACTGCAGGAAATCGAGTCCTGTATACACCCCAGAAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGCATCTTCAGAGACTCATTTTTCAACCACTTTGGAGCAGGCGACTTCAGGTCTTCCCTTGGGACTaGGCTGGTGTTTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FQHLQRLIFQPLWSRRLQVFPWD*AGVFFC Trigger: ACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGAC...CTGAAGTCGCCTGCTCCAAAGTGGTTGAAAAATGAGTCTCTGAAGATGCTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGTTATGCTCATGTGGACTAGGTCTAACCTGTGCTAATAAACTTTGCCTTCTCCCACTAGGCTTCTaGATGACTGAGGGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQLCSCGLGLTCANKLCLLPLGF*MTEGEG Trigger: ACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAG...AAGGCAAAGTTTATTAGCACAGGTTAGACCTAGTCCACATGAGCATAACTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCATCAGCAAGTTTGCTTTaGGGTGGAGTTTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPSASLL*GGVSRV Trigger: TACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGA...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCATCCCCTTCAGCAAGTTaGCTTTTGGGTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPSPSAS*LLGGVS Trigger: GGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGA...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAGTCTTCCCTTGGGACTaGGCTGGTGTTTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPVFPWD*AGVFFC Trigger: ACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGAC...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAATCAAAAGCCTCTCTGTCAGGTATGAAAGTGTATGTGTTGGACAGCTGTCAGCAAGTTTGCTTTaGGGTGGAGTTTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TEIKSLSVRYESVCVGQLSASLL*GGVSRV Trigger: TACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGA...CAGCTGTCCAACACATACACTTTCATACCTGACAGAGAGGCTTTTGATTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAGGTTCCTCAGCAGACTaGTTGTTGTTCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPGSSAD*LLFSSF Trigger: GAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACC...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTGTCTTCCCTTGGGACTaGGCTGGTGTTTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIVFPWD*AGVFFC Trigger: ACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGAC...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTTCCTTCTCATCCTTTTaGGGTTCCTCAGCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSVSIPSHNAHMGRKSTISFSSF*GSSADL Trigger: CAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGA...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAATCTTCCAGTTTTACTaGTGGTTCTGGATCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPIFQFY*WFWIQS Trigger: GCTCTGGATCCAGAACCACAAGTAAAACTGGAAGAT...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TCCTACCCTAAACTTTTGTTAAGGCGCATTCAGAGCAGAGAGAGAGACCTTACAATGGATGAGTTCACCTaGAGACATATCAGTTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SYPKLLLRRIQSRERDLTMDEFT*RHISCH Trigger: ATGGCAACTGATATGTCTCAAGGTGAACTCATCCAT...TGTAAGGTCTCTCTCTCTGCTCTGAATGCGCCTTAACAAAAGTTTAGGGTAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAATCAAAAGCCTCTCTGTCAGGTATGAAAGTGTATGTGTTGGACAGCTGCAATGGCAGACAAGATaGCATATTCCATCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TEIKSLSVRYESVCVGQLQWQTR*HIPSGF Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...CAGCTGTCCAACACATACACTTTCATACCTGACAGAGAGGCTTTTGATTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTCAATGGCAGACAAGATaGCATATTCCATCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIQWQTR*HIPSGF Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTGTCCATTCCTTCCCACAATGCTCACATGGGAAGAAAAAGTACAATTATGGATGAGTTCACCTaGAGACATATCAGTTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSVSIPSHNAHMGRKSTIMDEFT*RHISCH Trigger: ATGGCAACTGATATGTCTCAAGGTGAACTCATCCAT...AATTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAAATCAGATTCCATGTAGTCCTGTACTTCCCCTTCAGTCAGAAACCAATTTCTGAGGTGGTTTaGATTTCTGGACCACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: TPEIRFHVVLYFPFSQKPISEVV*ISGPQQ Trigger: TTGTTGTGGTCCAGAAATCAAAACCACCTCAGAAAT...TGGTTTCTGACTGAAGGGGAAGTACAGGACTACATGGAATCTGATTTCTGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
||
| CDS-3UTR CAA 90 bp | AAACTAGGCTCTTATGATGTTGAGAAAAGTTTTTCAATAAAGATGACTCCTCCCTCCTTCTCATCCTTTTaGGGTTCCTCAGCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KLGSYDVEKSFSIKMTPPSFSSF*GSSADL Trigger: CAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGA...GGGAGGAGTCATCTTTATTGAAAAACTTTTCTCAACATCATAAGAGCCTAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105825.8 ENSMUST00000105827.8 |
||
| CDS CCA 72 bp | GAAGCCATGGGGGTTTGTCTCTGGGCCCTGGCTAGCTaGCTGGCAGAGAGAGTCGCCCAGGCAGGAATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: EAMGVCLWALAS*LAERVAQAGIV Trigger: GACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000137865.8 ENSMUST00000165861.8 |
||
| CDS CCA 72 bp | AGATTGCGTCCATCTTGGGCCGTGGGGAGGAAGCCATaGGGGTTTGTCTCTGGGCCCTGGCTAGCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRPSWAVGRKP*GFVSGPWLAGW Trigger: CCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | GGAGCTTTCTTAGGCAGCGGCCTCACTTTCCCTCTCTaGGCAGCCGGGACTTTCCGCGCAGGCTTCGACCCT | + |
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Preference number: 6 (lower is better) Translates to: GAFLGSGLTFPL*AAGTFRAGFDP Trigger: AGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | CCATGGGGGTTTGTCTCTGGGCCCTGGCTAGCTGGCTaGCAGAGAGAGTCGCCCAGGCAGGAATCGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PWGFVSGPWLAG*QRESPRQESSF Trigger: AAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | GGGTCTGGCTTTCCTGGCAGGGGTCTTGGCCTTGGGTaGAGCTTTCTTAGGCAGCGGCCTCACTTTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSGFPGRGLGLG*SFLRQRPHFPS Trigger: AGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS GCA 72 bp | CTTCTCTCCACTCTCAGGCTCCCCCTTGGGCTGCTCTaGCTCACTGGATGTAGCAGGTGGAGTCTCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLSTLRLPLGLL*LTGCSRWSLIL Trigger: GAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCCTGAGAGTGGAGAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | GTCCCCGAAGCACCCTTGCCAGTTATCTGCTCGAGCTaGCCTCTCTCTACTGCTCGCTGCAGAGCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VPEAPLPVICSS*PLSTARCRAFF Trigger: GAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | GGACTTTCCGCGCAGGCTTCGACCCTCTCTGCTTCATaGAGGCTGTCTTCCCTTGGGACTTGGCTGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GLSAQASTLSAS*RLSSLGTWLVF Trigger: AAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS CAA 90 bp | TTCTGGAAGCATGCCTTAATGGCCTCAGTTAAGATTGCGTCCATCTaGGGCCGTGGGGAGGAAGCCATGGGGGTTTGTCTCTGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FWKHALMASVKIASI*GRGEEAMGVCLWAL Trigger: CAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000165861.8 |
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| CDS CAA 90 bp | TTCTGGAAGCTTGCCTTAATGGCCTCAGTTAAGATTGCGTCCATCTaGGGCCGTGGGGAGGAAGCCATGGGGGTTTGTCTCTGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FWKLALMASVKIASI*GRGEEAMGVCLWAL Trigger: CAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCAAGCTTCCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 |
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| CDS GCA 72 bp | GTTATCTGCTCGAGCTGGCCTCTCTCTACTGCTCGCTaGAGAGCATTCTTCAACAACTGGGGCCTGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: VICSSWPLSTAR*RAFFNNWGLMS Trigger: GGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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| CDS GCA 72 bp | CTTGCCAGTTATCTGCTCGAGCTGGCCTCTCTCTACTaGTCGCTGCAGAGCATTCTTCAACAACTGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LASYLLELASLY*SLQSILQQLGP Trigger: AGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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| CDS CAA 72 bp | CATGCCTTAATGGCCTCAGTTAAGATTGCGTCCATCTaGGGCCGTGGGGAGGAAGCCATGGGGGTTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HALMASVKIASI*GRGEEAMGVCL Trigger: GAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000165861.8 |
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| CDS CAA 72 bp | CTTGCCTTAATGGCCTCAGTTAAGATTGCGTCCATCTaGGGCCGTGGGGAGGAAGCCATGGGGGTTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LALMASVKIASI*GRGEEAMGVCL Trigger: GAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 |
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| CDS TCA 72 bp | CCCTTCTCTCCAGACCCAGAGACGGGTACTTATGAATaGTGTACTTTCGAATCGCAACCACCGAGGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PFSPDPETGTYE*CTFESQPPRRQ Trigger: CTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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| CDS CAA 90 bp | GCTCGACGTATAGGCATGGTGGTATCTTCTGCTTTCTCACCTAACTaGTCCGCGTGGATCAGCTGCGCTCCTACTATAAGTGGGAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ARRIGMVVSSAFSPN*SAWISCAPTISGSA Trigger: GGCACTCCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTATACGTCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS GCA 72 bp | TCTGCTTTCTCACCTAACTTGTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGGAGTGCCTTAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: SAFSPNLSAWIS*APTISGSALGW Trigger: CCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGACAAGTTAGGTGAGAAAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS GCA 72 bp | CTTAGGCTCGTTCATGGCAGCAATGGCAGACAAGATTaGATATTCCATCAGGCTTCCACCCAGCAGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LRLVHGSNGRQD*IFHQASTQQGL Trigger: AAGCCCCTGCTGGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | CTTGTCCGCGTGGATCAGCTGCGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGATGAGTTCACCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LVRVDQLRSYYK*ECLRMDEFTLR Trigger: TCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGACAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | GTGGTATCTTCTGCTTTCTCACCTAACTTGTCCGCGTaGATCAGCTGCGCTCCTACTATAAGTGGGAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VVSSAFSPNLSA*ISCAPTISGSA Trigger: GGCACTCCCACTTATAGTAGGAGCGCAGCTGATCCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | CCCCTTGGGCTGCTCTGCCTCACTGGATGTAGCAGGTaGAGTCTCATTCTCCTGTTCTTCTACAGTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: PLGLLCLTGCSR*SLILLFFYSRD Trigger: ATCTCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000137851.8 ENSMUST00000165861.8 |
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| CDS GCA 72 bp | CGCGTGGATCAGCTGCGCTCCTACTATAAGTGGGAGTaGCTTAGGATGGATGAGTTCACCTTGAGACATATC | + |
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Preference number: 6 (lower is better) Translates to: RVDQLRSYYKWE*LRMDEFTLRHI Trigger: GATATGTCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGATCCACGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | GGGACTTGGCTGGTGTTTTCTTCTGTAAGCTCCTCTTaGGTGGTGGTTCCTCATCCTCAGAGTCTTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: GTWLVFSSVSSS*VVVPHPQSLLM Trigger: CATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | TACTTTCGAATCGCAACCACCGAGGCGCCAGTCTTCTaGAAGCTTGCCTTAATGGCCTCAGTTAAGATTGCG | + |
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Preference number: 6 (lower is better) Translates to: YFRIATTEAPVF*KLALMASVKIA Trigger: CGCAATCTTAACTGAGGCCATTAAGGCAAGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000124305.8 ENSMUST00000137851.8 |
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| CDS CAA 90 bp | GTCTTCCCTTGGGACTTGGCTGGTGTTTTCTTCTGTAAGCTCCTCTaGGGTGGTGGTTCCTCATCCTCAGAGTCTTCTGATGATTCATCG | + |
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Preference number: 6 (lower is better) Translates to: VFPWDLAGVFFCKLL*GGGSSSSESSDDSS Trigger: CGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS CAA 90 bp | TCCTGTTCTTCTGGTTTTTCTTCCTCCCCTTCAGCAAGTTTGCTTTaGGGTGGAGTTTCCCGGGTAGAATTCACGGCTCGACGTATAGGC | + |
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Preference number: 6 (lower is better) Translates to: SCSSGFSSSPSASLL*GGVSRVEFTARRIG Trigger: GCCTATACGTCGAGCCGTGAATTCTACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAAGAACAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124305.8 ENSMUST00000137865.8 |
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| CDS CAA 72 bp | TGGGACTTGGCTGGTGTTTTCTTCTGTAAGCTCCTCTaGGGTGGTGGTTCCTCATCCTCAGAGTCTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: WDLAGVFFCKLL*GGGSSSSESSD Trigger: ATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000165861.8 |
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| CDS CAA 72 bp | ATAGGCATGGTGGTATCTTCTGCTTTCTCACCTAACTaGTCCGCGTGGATCAGCTGCGCTCCTACTATAAGT | + |
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Preference number: 6 (lower is better) Translates to: IGMVVSSAFSPN*SAWISCAPTIS Trigger: ACTTATAGTAGGAGCGCAGCTGATCCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030541.13 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000130071.2 ENSMUST00000137865.8 ENSMUST00000165861.8 |
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| CDS CCA 72 bp | TTTCAGCAAATGCATCTGATAGTTAGAGTTGGCCCCTaGGTGGTTCTCCAGGACATACTTCTTCAGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FQQMHLIVRVGP*VVLQDILLQSS Trigger: ACTGCTCTGAAGAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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| CDS CAA 72 bp | AGTAAAAGCCAACGGGAGAACATCTTCCAGTTTTACTaGTGGTTCTGGATCCAGAGCCGAGCCCTTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SKSQRENIFQFY*WFWIQSRALLS Trigger: AGAAAGAAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000030541.13 ENSMUST00000097836.10 ENSMUST00000105825.8 ENSMUST00000105826.8 ENSMUST00000105827.8 ENSMUST00000148681.3 ENSMUST00000165861.8 |
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