Pregenerated sensors for HOXD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079277Ensembl transcript IDs: ENSMUST00000047830.8, ENSMUST00000111982.8, ENSMUST00000111983.9, ENSMUST00000140666.2, ENSMUST00000144544.3
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | ATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGGCCCAGTC | + |
Preference number: 1 (lower is better) Translates to: MALSGLLGRILAADL*RVTQRRTRLEGGPV Trigger: GACTGGGCCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR TCA 90 bp | CTGTGTCGAGTGGTGAGGGCTTCGGCTGTTGAGAAACGACTAGCGTaGGTCCTGCCACCGGGCTGCCTGACTCTACCCATGAAGGACCAT | + |
Preference number: 1 (lower is better) Translates to: LCRVVRASAVEKRLA*VLPPGCLTLPMKDH Trigger: ATGGTCCTTCATGGGTAGAGTCAGGCAGCCCGGTGGCAGGACTCACGCTAGTCGTTTCTCAACAGCCGAAGCCCTCACCACTCGACACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR TCA 90 bp | GCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGG | + |
Preference number: 1 (lower is better) Translates to: AVYGTVRFTGEDPCG*FMASHPKEDAPGGR Trigger: CCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR TCA 90 bp | TCCTTTTCCCCCAACCCGGGATCATACAGAGGGATGAAGACAGAGTaGTCTGCTTGCAGATGTGTGCGATTAACACAGATACACTTCCAA | + |
Preference number: 1 (lower is better) Translates to: SFSPNPGSYRGMKTE*SACRCVRLTQIHFQ Trigger: TTGGAAGTGTATCTGTGTTAATCGCACACATCTGCAAGCAGATCACTCTGTCTTCATCCCTCTGTATGATCCCGGGTTGGGGGAAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
3UTR GCA 90 bp | TTCCCCCAACCCGGGATCATACAGAGGGATGAAGACAGAGTGATCTaGTTGCAGATGTGTGCGATTAACACAGATACACTTCCAACTGAA | + |
Preference number: 1 (lower is better) Translates to: FPQPGIIQRDEDRVI*LQMCAINTDTLPTE Trigger: TTCAGTTGGAAGTGTATCTGTGTTAATCGCACACATCTGCAAGCAGATCACTCTGTCTTCATCCCTCTGTATGATCCCGGGTTGGGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
3UTR-3UTR GCA 90 bp | GGCCGCTGGAAGCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCACCACCACCTCTaGCACCAAAACCAGAGAGGT | + |
Preference number: 2 (lower is better) Translates to: GRWKPLVRHPPGQIREGDPHHHL*HQNQRG Trigger: ACCTCTCTGGTTTTGGTGGCAGAGGTGGTGGTGGGG...ATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR-3UTR GCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGCCCCACCACCACCTCTaGCACCAAAACCAGAGAGGT | + |
Preference number: 2 (lower is better) Translates to: ATREASARPDQGGGSPKLPHHHL*HQNQRG Trigger: ACCTCTCTGGTTTTGGTGGCAGAGGTGGTGGTGGGG...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR-3UTR CCA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCAAAGGAGGACGCGCCTaGAGGGAGGCCCAGTCGCGT | + |
Preference number: 2 (lower is better) Translates to: ALSGLLGRILAADLWRVTKGGRA*REAQSR Trigger: ACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR CAA 90 bp | TCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTaGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGG | + |
Preference number: 2 (lower is better) Translates to: SVRSLWHCQVYWGGS*RLIYGESPKGGRAW Trigger: CCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR-3UTR TCA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGGCTGGAAGCCACTCGTaGGGCATCCGCCAGGCCAGA | + |
Preference number: 2 (lower is better) Translates to: LFSPMQSLQEGTEHYKLRAGSHS*GIRQAR Trigger: TCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGC...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR-3UTR CCA 90 bp | TACAGATTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAAAAAGGAGGACGCGCCTaGAGGGAGGCCCAGTCGCGT | + |
Preference number: 2 (lower is better) Translates to: YRLFSPMQSLQEGTEHYKKGGRA*REAQSR Trigger: ACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT...TTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAATCTGTA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR-3UTR TCA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGGAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCA | + |
Preference number: 2 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLEDPCG*FMASHP Trigger: TGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTC...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR-3UTR CCA 90 bp | CTCAGTTTTAAGAGCTTAAATGTAATCAAGTATTTCTCCACGCCAATTTTGTGCAAAGGAGGACGCGCCTaGAGGGAGGCCCAGTCGCGT | + |
Preference number: 2 (lower is better) Translates to: LSFKSLNVIKYFSTPILCKGGRA*REAQSR Trigger: ACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT...GCACAAAATTGGCGTGGAGAAATACTTGATTACATTTAAGCTCTTAAAACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
3UTR-3UTR CCA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGAGG | + |
Preference number: 2 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLLAADL*RVTQRR Trigger: CCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR CAA 90 bp | CCCCAACCCGGGATCATACAGAGGGATGAAGACAGAGTGATCTGCTaGCAGATGTGTGCGATTAACACAGATACACTTCCAACTGAAAAA | + |
Preference number: 2 (lower is better) Translates to: PQPGIIQRDEDRVIC*QMCAINTDTLPTEK Trigger: TTTTTCAGTTGGAAGTGTATCTGTGTTAATCGCACACATCTGCAAGCAGATCACTCTGTCTTCATCCCTCTGTATGATCCCGGGTTGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
3UTR-3UTR TCA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGGAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCA | + |
Preference number: 2 (lower is better) Translates to: LFSPMQSLQEGTEHYKLREDPCG*FMASHP Trigger: TGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTC...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR-3UTR GCA 90 bp | CTCAGTTTTAAGAGCTTAAATGTAATCAAGTATTTCTCCACGCCAATTTTGTGCGTCCTGCCACCGGGCTaGCTGACTCTACCCATGAAG | + |
Preference number: 2 (lower is better) Translates to: LSFKSLNVIKYFSTPILCVLPPG*LTLPMK Trigger: CTTCATGGGTAGAGTCAGGCAGCCCGGTGGCAGGAC...GCACAAAATTGGCGTGGAGAAATACTTGATTACATTTAAGCTCTTAAAACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
3UTR-3UTR CCA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGAGG | + |
Preference number: 2 (lower is better) Translates to: LFSPMQSLQEGTEHYKLRLAADL*RVTQRR Trigger: CCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR CCA 72 bp | GGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTaGCCGCTGGAAGCCACTCGTGAGGCATCCGCCAGG | + |
Preference number: 3 (lower is better) Translates to: GRAWREAQSRQP*PLEATREASAR Trigger: CCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR CCA 72 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTaGAAGCCACTCGTGAGGCATCCGCCAGGCCAGATC | + |
Preference number: 3 (lower is better) Translates to: PGGRPSRVSPGR*KPLVRHPPGQI Trigger: GATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR TCA 72 bp | CCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTaGGGCATCCGCCAGGCCAGATCAGGGAGGGGGATC | + |
Preference number: 3 (lower is better) Translates to: PVASALAAGSHS*GIRQARSGRGI Trigger: GATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR TCA 72 bp | GTGGTGAGGGCTTCGGCTGTTGAGAAACGACTAGCGTaGGTCCTGCCACCGGGCTGCCTGACTCTACCCATG | + |
Preference number: 3 (lower is better) Translates to: VVRASAVEKRLA*VLPPGCLTLPM Trigger: CATGGGTAGAGTCAGGCAGCCCGGTGGCAGGACTCACGCTAGTCGTTTCTCAACAGCCGAAGCCCTCACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR TCA 72 bp | GGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCAAAGGAGGACGCGCCT | + |
Preference number: 3 (lower is better) Translates to: GTVRFTGEDPCG*FMASHPKEDAP Trigger: AGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR CCA 72 bp | TCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGA | + |
Preference number: 3 (lower is better) Translates to: SGLLGRILAADL*RVTQRRTRLEG Trigger: TCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR TCA 72 bp | GGTCCTTTTCCCCCAACCCGGGATCATACAGAGGGATaGAGACAGAGTGATCTGCTTGCAGATGTGTGCGAT | + |
Preference number: 3 (lower is better) Translates to: GPFPPTRDHTEG*RQSDLLADVCD Trigger: ATCGCACACATCTGCAAGCAGATCACTCTGTCTTCATCCCTCTGTATGATCCCGGGTTGGGGGAAAAGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
3UTR TCA 72 bp | CCCAACCCGGGATCATACAGAGGGATGAAGACAGAGTaGTCTGCTTGCAGATGTGTGCGATTAACACAGATA | + |
Preference number: 3 (lower is better) Translates to: PNPGSYRGMKTE*SACRCVRLTQI Trigger: TATCTGTGTTAATCGCACACATCTGCAAGCAGATCACTCTGTCTTCATCCCTCTGTATGATCCCGGGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
3UTR CCA 72 bp | TCTCAATCCTTTAACATCAACTACAGACACCAGCCATaGTTACAACTGTTCAAAACTATCCTCTCAACTAGT | + |
Preference number: 3 (lower is better) Translates to: SQSFNINYRHQP*LQLFKTILSTS Trigger: ACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGTTGATGTTAAAGGATTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR GCA 72 bp | TCGCTTCAAATAATAAATACAGATTGTTTAGTCCGATaGAATCTTTACAGGAGGGGACGGAGCATTATAAAT | + |
Preference number: 3 (lower is better) Translates to: SLQIINTDCLVR*NLYRRGRSIIN Trigger: ATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAATCTGTATTTATTATTTGAAGCGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGGAGGCAGGCAGCTGCTaGGCGGCGCCGTGTAGGCGG | + |
Preference number: 4 (lower is better) Translates to: PGGRPSRVSPGRWKPLVREAGSC*AAPCRR Trigger: CCGCCTACACGGCGCCGCTCAGCAGCTGCCTGCCTC...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCAAGACCGGCCCGGACGTaGGCGCCATGGAGTCGACGA | + |
Preference number: 4 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPRPART*APWSRR Trigger: TCGTCGACTCCATGGCGCCCACGTCCGGGCCGGTCT...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | GGCCGCTGGAAGCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATGAGGCAGGCAGCTGCTaGGCGGCGCCGTGTAGGCGG | + |
Preference number: 4 (lower is better) Translates to: GRWKPLVRHPPGQIREGDEAGSC*AAPCRR Trigger: CCGCCTACACGGCGCCGCTCAGCAGCTGCCTGCCTC...ATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGGGGTACCGCTTCTGCTaGGGCAGGCAGCTGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: PGGRPSRVSPGRWKPLVRGYRFC*GRQLLS Trigger: GCTCAGCAGCTGCCTGCCTCAGCAGAAGCGGTACCC...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | AAAGGAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAATTGCTCGCCATGGGGTaGGGCTCGAACTCGGGCGCC | + |
Preference number: 4 (lower is better) Translates to: KGGRAWREAQSRQPWPLELLAMG*GSNSGA Trigger: GGCGCCCGAGTTCGAGCCTCACCCCATGGCGAGCAA...TTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCATTCAGACCAGGGGGTTaGTTGCCACCACCTCCACCC | + |
Preference number: 4 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPFRPGG*LPPPPP Trigger: GGGTGGAGGTGGTGGCAACCAACCCCCTGGTCTGAA...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | TTGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGGCCGAGGCAGGCAGCTGCTaGGCGGCGCCGTGTAGGCGG | + |
Preference number: 4 (lower is better) Translates to: LRLIYGESPKGGRAWREAEAGSC*AAPCRR Trigger: CCGCCTACACGGCGCCGCTCAGCAGCTGCCTGCCTC...GGCCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | AAAGGAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAACTGGCCGAAGACGGGTaGGAGAGGTGGCCCAGATTG | + |
Preference number: 4 (lower is better) Translates to: KGGRAWREAQSRQPWPLELAEDG*ERWPRL Trigger: CAATCTGGGCCACCTCTCGCACCCGTCTTCGGCCAG...TTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGAGCTCCTTTGTGGGCTaGGGCTCGGAGAGGTGCAGA | + |
Preference number: 4 (lower is better) Translates to: PGGRPSRVSPGRWKPLVRSSFVG*GSERCR Trigger: TCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCT...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GGCCGCTGGAAGCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCGCCGTTGCTCGCCATaGGGTGAGGCTCGAACTCGG | + |
Preference number: 4 (lower is better) Translates to: GRWKPLVRHPPGQIREGDRRCSP*GEARTR Trigger: CCGAGTTCGAGCCTCACCCCATGGCGAGCAACGGCG...ATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCAAACTGTAGTCCACGCTaGCCGAAGACGGGTGCGAGA | + |
Preference number: 4 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPNCSPR*PKTGAR Trigger: TCTCGCACCCGTCTTCGGCCAGCGTGGACTACAGTT...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGTCCAGGATTGGTAGGTaGAGATGGGGGCAAGGTGGG | + |
Preference number: 4 (lower is better) Translates to: PGGRPSRVSPGRWKPLVRSRIGR*RWGQGG Trigger: CCCACCTTGCCCCCATCTTCACCTACCAATCCTGGA...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGTTGCTCGCCATGGGGTaGGGCTCGAACTCGGGCGCC | + |
Preference number: 4 (lower is better) Translates to: ATREASARPDQGGGSPKLLLAMG*GSNSGA Trigger: GGCGCCCGAGTTCGAGCCTCACCCCATGGCGAGCAA...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | GGCCGCTGGAAGCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCTGGCCGAAGACGGGTaGGAGAGGTGGCCCAGATTG | + |
Preference number: 4 (lower is better) Translates to: GRWKPLVRHPPGQIREGDLAEDG*ERWPRL Trigger: CAATCTGGGCCACCTCTCGCACCCGTCTTCGGCCAG...ATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | AAAGGAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGGATGCTGGGCCGGGTaGGCTCTTGTCCTCACAGTT | + |
Preference number: 4 (lower is better) Translates to: KGGRAWREAQSRQPWPLEGCWAG*ALVLTV Trigger: AACTGTGAGGACAAGAGCCCACCCGGCCCAGCATCC...TTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GGCCGCTGGAAGCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCACCCTCTTGGATGCTaGGCCGGGTGGGCTCTTGTC | + |
Preference number: 4 (lower is better) Translates to: GRWKPLVRHPPGQIREGDHPLGC*AGWALV Trigger: GACAAGAGCCCACCCGGCCCAGCATCCAAGAGGGTG...ATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGGGGTACCGCTTCTGCTaGGGCAGGCAGCTGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: ATREASARPDQGGGSPKLGYRFC*GRQLLS Trigger: GCTCAGCAGCTGCCTGCCTCAGCAGAAGCGGTACCC...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGTACACCGGGCTGCCCTaGAGGTTGGCGCTGGCGAAG | + |
Preference number: 4 (lower is better) Translates to: ATREASARPDQGGGSPKLYTGLP*RLALAK Trigger: CTTCGCCAGCGCCAACCTGCAGGGCAGCCCGGTGTA...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | AAAGGAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAAGTTCAGCTCCTTTGTaGGCTGGGGCTCGGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: KGGRAWREAQSRQPWPLESSAPL*AGARRG Trigger: ACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACT...TTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCACAGTTCTCTCCTaGAGTGGCACAGCTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPLTVLS*SGTAVL Trigger: AAGAACAGCTGTGCCACTTCAGGAGAGAACTGTGAG...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGTGGAGTCGACGAAGTTaGCGCCCACGTACACCGGGC | + |
Preference number: 4 (lower is better) Translates to: ATREASARPDQGGGSPKLWSRRS*RPRTPG Trigger: GCCCGGTGTACGTGGGCGGCAACTTCGTCGACTCCA...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGCTGGCCGAAGACGGGTaGGAGAGGTGGCCCAGATTG | + |
Preference number: 4 (lower is better) Translates to: ATREASARPDQGGGSPKLLAEDG*ERWPRL Trigger: CAATCTGGGCCACCTCTCGCACCCGTCTTCGGCCAG...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGCACCCTCTTGGATGCTaGGCCGGGTGGGCTCTTGTC | + |
Preference number: 4 (lower is better) Translates to: ATREASARPDQGGGSPKLHPLGC*AGWALV Trigger: GACAAGAGCCCACCCGGCCCAGCATCCAAGAGGGTG...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TTGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGGCCCGCCGTTGCTCGCCATaGGGTGAGGCTCGAACTCGG | + |
Preference number: 4 (lower is better) Translates to: LRLIYGESPKGGRAWREARRCSP*GEARTR Trigger: CCGAGTTCGAGCCTCACCCCATGGCGAGCAACGGCG...GGCCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CACCACCTCTGCCACCAAAACCAGAGAGGTAATTGCGCCTGGCCGGCGGCAACAAGACCGGCCCGGACGTaGGCGCCATGGAGTCGACGA | + |
Preference number: 4 (lower is better) Translates to: HHLCHQNQRGNCAWPAATRPART*APWSRR Trigger: TCGTCGACTCCATGGCGCCCACGTCCGGGCCGGTCT...TGTTGCCGCCGGCCAGGCGCAATTACCTCTCTGGTTTTGGTGGCAGAGGTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | TTGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGGCCTGGAGTCGACGAAGTTaGCGCCCACGTACACCGGGC | + |
Preference number: 4 (lower is better) Translates to: LRLIYGESPKGGRAWREAWSRRS*RPRTPG Trigger: GCCCGGTGTACGTGGGCGGCAACTTCGTCGACTCCA...GGCCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GGGTCGAGGACTTACCTTAGGGACACCATTACCAGATTAGAGTCCCTCGGTCCGGGCTGCCCTGCAGGTTaGCGCTGGCGAAGCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: GSRTYLRDTITRLESLGPGCPAG*RWRSRR Trigger: GCGGCGGCTTCGCCAGCGCCAACCTGCAGGGCAGCC...CGGACCGAGGGACTCTAATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGAGGCTGCCCTGCAGGTTaGCGCTGGCGAAGCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: SGLATDGSRTYLRDTITRGCPAG*RWRSRR Trigger: GCGGCGGCTTCGCCAGCGCCAACCTGCAGGGCAGCC...TCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CACCACCTCTGCCACCAAAACCAGAGAGGTAATTGCGCCTGGCCGGCGGCAACACGGACGTGGGCGCCATaGAGTCGACGAAGTTGCCGC | + |
Preference number: 4 (lower is better) Translates to: HHLCHQNQRGNCAWPAATRTWAP*SRRSCR Trigger: GCGGCAACTTCGTCGACTCCATGGCGCCCACGTCCG...TGTTGCCGCCGGCCAGGCGCAATTACCTCTCTGGTTTTGGTGGCAGAGGTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGTTTGCTGATGGTGGATaGAGAGCTAGAAGCACTGAG | + |
Preference number: 4 (lower is better) Translates to: PGGRPSRVSPGRWKPLVRFADGG*RARSTE Trigger: CTCAGTGCTTCTAGCTCTTCATCCACCATCAGCAAA...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCAAGCCATATGTGTCAGTaGCTTTGCTATATCCGTAGC | + |
Preference number: 4 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPSHMCQ*LCYIRS Trigger: GCTACGGATATAGCAAAGCCACTGACACATATGGCT...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCCCTGCAGGTTGGCGCTaGCGAAGCCGCCGCCGTTGC | + |
Preference number: 4 (lower is better) Translates to: ALSGLLGRILAADLWRVTPAGWR*RSRRRC Trigger: GCAACGGCGGCGGCTTCGCCAGCGCCAACCTGCAGG...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATCCCCTAAACTGAACTGTAGTCCACGCTaGCCGAAGACGGGTGCGAGA | + |
Preference number: 4 (lower is better) Translates to: ATREASARPDQGGGSPKLNCSPR*PKTGAR Trigger: TCTCGCACCCGTCTTCGGCCAGCGTGGACTACAGTT...CAGTTTAGGGGATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | GGGTCGAGGACTTACCTTAGGGACACCATTACCAGATTAGAGTCCCTCGGTCCGCGAAGCCGCCGCCGTTaGTCGCCATGGGGTGAGGCT | + |
Preference number: 4 (lower is better) Translates to: GSRTYLRDTITRLESLGPRSRRR*SPWGEA Trigger: AGCCTCACCCCATGGCGAGCAACGGCGGCGGCTTCG...CGGACCGAGGGACTCTAATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | AGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTAGACCGGCCCGGACGTaGGCGCCATGGAGTCGACGA | + |
Preference number: 4 (lower is better) Translates to: RVPRSAVYGTVRFTGEDPRPART*APWSRR Trigger: TCGTCGACTCCATGGCGCCCACGTCCGGGCCGGTCT...AGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | AGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTAGAGGTGGCCCAGATTaGAGACCGGCCCGGACGTGG | + |
Preference number: 4 (lower is better) Translates to: RVPRSAVYGTVRFTGEDPRGGPD*RPARTW Trigger: CCACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCT...AGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATTACACCGGGCTGCCCTaGAGGTTGGCGCTGGCGAAG | + |
Preference number: 4 (lower is better) Translates to: QDSPRMGRGLTLGTPLPDYTGLP*RLALAK Trigger: CTTCGCCAGCGCCAACCTGCAGGGCAGCCCGGTGTA...ATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | TGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCACGTACACCGGGCTaGCCTGCAGGTTGGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: WHCQVYWGGSLRLIYGESPRTPG*PAGWRW Trigger: CCAGCGCCAACCTGCAGGGCAGCCCGGTGTACGTGG...TGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CCCTCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTTGGAGTCGACGAAGTTaGCGCCCACGTACACCGGGC | + |
Preference number: 4 (lower is better) Translates to: PSSGLATDGSRTYLRDTIWSRRS*RPRTPG Trigger: GCCCGGTGTACGTGGGCGGCAACTTCGTCGACTCCA...AATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTACCGTGCGCACCCTCTTaGATGCTGGGCCGGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: PQFMALSGLLGRILAADLPCAPS*MLGRVG Trigger: GCCCACCCGGCCCAGCATCCAAGAGGGTGCGCACGG...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CCCTCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTGGCAGCAGCAGGGGGTaGGTAAGGCTGATGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: PSSGLATDGSRTYLRDTIGSSRG*VRLMRS Trigger: ACTCCTCATCAGCCTTACCCACCCCCTGCTGCTGCC...AATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCCACCCTCTTGGATGCTaGGCCGGGTGGGCTCTTGTC | + |
Preference number: 4 (lower is better) Translates to: SSGLATDGSRTYLRDTITHPLGC*AGWALV Trigger: GACAAGAGCCCACCCGGCCCAGCATCCAAGAGGGTG...GGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATCCGTGCGCACCCTCTTaGATGCTGGGCCGGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYPCAPS*MLGRVG Trigger: GCCCACCCGGCCCAGCATCCAAGAGGGTGCGCACGG...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCGACGGGTGCGAGAGGTaGCCCAGATTGAAGACCGGC | + |
Preference number: 4 (lower is better) Translates to: SSGLATDGSRTYLRDTITDGCER*PRLKTG Trigger: GCCGGTCTTCAATCTGGGCCACCTCTCGCACCCGTC...GGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTAAGAGGTGGCCCAGATTaGAGACCGGCCCGGACGTGG | + |
Preference number: 4 (lower is better) Translates to: PQFMALSGLLGRILAADLRGGPD*RPARTW Trigger: CCACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCT...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CCCTCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTGGTTGTGGTGGCTGCTaGTCTGAGTTCAGACCAGGG | + |
Preference number: 4 (lower is better) Translates to: PSSGLATDGSRTYLRDTIGCGGC*SEFRPG Trigger: CCCTGGTCTGAACTCAGAGCAGCAGCCACCACAACC...AATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATCCACGTACACCGGGCTaGCCTGCAGGTTGGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYPRTPG*PAGWRW Trigger: CCAGCGCCAACCTGCAGGGCAGCCCGGTGTACGTGG...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCAGCTCCTTTGTGGGCTaGGGCTCGGAGAGGTGCAGA | + |
Preference number: 4 (lower is better) Translates to: ALSGLLGRILAADLWRVTSSFVG*GSERCR Trigger: TCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCT...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCTTCAGACCAGGGGGTTaGTTGCCACCACCTCCACCC | + |
Preference number: 4 (lower is better) Translates to: SSGLATDGSRTYLRDTITFRPGG*LPPPPP Trigger: GGGTGGAGGTGGTGGCAACCAACCCCCTGGTCTGAA...GGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GGGTCGAGGACTTACCTTAGGGACACCATTACCAGATTAGAGTCCCTCGGTCCGGGATGCTGGGCCGGGTaGGCTCTTGTCCTCACAGTT | + |
Preference number: 4 (lower is better) Translates to: GSRTYLRDTITRLESLGPGCWAG*ALVLTV Trigger: AACTGTGAGGACAAGAGCCCACCCGGCCCAGCATCC...CGGACCGAGGGACTCTAATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTACGGACGTGGGCGCCATaGAGTCGACGAAGTTGCCGC | + |
Preference number: 4 (lower is better) Translates to: PQFMALSGLLGRILAADLRTWAP*SRRSCR Trigger: GCGGCAACTTCGTCGACTCCATGGCGCCCACGTCCG...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | AGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTCCAGGATTGGTAGGTaGAGATGGGGGCAAGGTGGG | + |
Preference number: 4 (lower is better) Translates to: RVPRSAVYGTVRFTGEDPSRIGR*RWGQGG Trigger: CCCACCTTGCCCCCATCTTCACCTACCAATCCTGGA...AGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CACCACCTCTGCCACCAAAACCAGAGAGGTAATTGCGCCTGGCCGGCGGCAACACTCACAGTTCTCTCCTaGAGTGGCACAGCTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: HHLCHQNQRGNCAWPAATLTVLS*SGTAVL Trigger: AAGAACAGCTGTGCCACTTCAGGAGAGAACTGTGAG...TGTTGCCGCCGGCCAGGCGCAATTACCTCTCTGGTTTTGGTGGCAGAGGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CCCTCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTCAGCCTTCTGCATGGTaGACTCAGGAAGTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: PSSGLATDGSRTYLRDTIQPSAW*TQEVPG Trigger: CCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTG...AATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCGGTTGTGGTGGCTGCTaGTCTGAGTTCAGACCAGGG | + |
Preference number: 4 (lower is better) Translates to: ALSGLLGRILAADLWRVTGCGGC*SEFRPG Trigger: CCCTGGTCTGAACTCAGAGCAGCAGCCACCACAACC...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATCCGTACATATTGGGCTaGGATTTGGCGAAAGCGGGC | + |
Preference number: 4 (lower is better) Translates to: QDSPRMGRGLTLGTPLPDPYILG*DLAKAG Trigger: GCCCGCTTTCGCCAAATCGCAGCCCAATATGTACGG...ATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TTGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGGCCAGCCATATGTGTCAGTaGCTTTGCTATATCCGTAGC | + |
Preference number: 4 (lower is better) Translates to: LRLIYGESPKGGRAWREASHMCQ*LCYIRS Trigger: GCTACGGATATAGCAAAGCCACTGACACATATGGCT...GGCCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TTAGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCAGTTCAGCTCCTTTGTaGGCTGGGGCTCGGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: LESLGPQFMALSGLLGRISSAPL*AGARRG Trigger: ACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACT...GATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATTCAGACCAGGGGGTTaGTTGCCACCACCTCCACCC | + |
Preference number: 4 (lower is better) Translates to: PQFMALSGLLGRILAADLFRPGG*LPPPPP Trigger: GGGTGGAGGTGGTGGCAACCAACCCCCTGGTCTGAA...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATCACCCTTGGTCTTCTTaGCAGGCACTCCACTTCCAG | + |
Preference number: 4 (lower is better) Translates to: QDSPRMGRGLTLGTPLPDHPWSS*QALHFQ Trigger: CTGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTG...ATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGACGGGTGCGAGAGGTaGCCCAGATTGAAGACCGGC | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYDGCER*PRLKTG Trigger: GCCGGTCTTCAATCTGGGCCACCTCTCGCACCCGTC...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTAGGTTGTGGTGGCTGCTaGTCTGAGTTCAGACCAGGG | + |
Preference number: 4 (lower is better) Translates to: PQFMALSGLLGRILAADLGCGGC*SEFRPG Trigger: CCCTGGTCTGAACTCAGAGCAGCAGCCACCACAACC...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | AGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTGGAGCAGGCAGAACTTaGGTAATCACTGTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: RVPRSAVYGTVRFTGEDPGAGRT*VITVQG Trigger: TCCCTGGACAGTGATTACCCAAGTTCTGCCTGCTCC...AGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGAGGAGCAGGCAGAACTTaGGTAATCACTGTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: SGLATDGSRTYLRDTITRGAGRT*VITVQG Trigger: TCCCTGGACAGTGATTACCCAAGTTCTGCCTGCTCC...TCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATAGCTCCTTTGTGGGCTaGGGCTCGGAGAGGTGCAGA | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYSSFVG*GSERCR Trigger: TCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCT...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACACCCTTGGTCTTCTTaGCAGGCACTCCACTTCCAG | + |
Preference number: 4 (lower is better) Translates to: WHCQVYWGGSLRLIYGESHPWSS*QALHFQ Trigger: CTGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTG...TGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATCCAGGCCGTACATATTaGGCTGCGATTTGGCGAAAG | + |
Preference number: 4 (lower is better) Translates to: QDSPRMGRGLTLGTPLPDPGRTY*AAIWRK Trigger: CTTTCGCCAAATCGCAGCCCAATATGTACGGCCTGG...ATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGACCAACCTGCAGGTTGGCGCTaGCGAAGCCGCCGCCGTTGC | + |
Preference number: 4 (lower is better) Translates to: HQPWLQLFKTILSTSSDQPAGWR*RSRRRC Trigger: GCAACGGCGGCGGCTTCGCCAGCGCCAACCTGCAGG...TTGGTCTGAACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGGGCTGCCCTGCAGGTTaGCGCTGGCGAAGCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: LFSPMQSLQEGTEHYKLRGCPAG*RWRSRR Trigger: GCGGCGGCTTCGCCAGCGCCAACCTGCAGGGCAGCC...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | ACTTACCTTAGGGACACCATTACCAGATTAGAGTCCCTCGGTCCGCAGTTTATGGACGGGTGCGAGAGGTaGCCCAGATTGAAGACCGGC | + |
Preference number: 4 (lower is better) Translates to: TYLRDTITRLESLGPQFMDGCER*PRLKTG Trigger: GCCGGTCTTCAATCTGGGCCACCTCTCGCACCCGTC...CATAAACTGCGGACCGAGGGACTCTAATCTGGTAATGGTGTCCCTAAGGTAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGGGGTACCGCTTCTGCTaGGGCAGGCAGCTGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLGYRFC*GRQLLS Trigger: GCTCAGCAGCTGCCTGCCTCAGCAGAAGCGGTACCC...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTACAGCCTTCTGCATGGTaGACTCAGGAAGTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: PQFMALSGLLGRILAADLQPSAW*TQEVPG Trigger: CCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTG...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGACCAACCACGTACACCGGGCTaGCCTGCAGGTTGGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: HQPWLQLFKTILSTSSDQPRTPG*PAGWRW Trigger: CCAGCGCCAACCTGCAGGGCAGCCCGGTGTACGTGG...TTGGTCTGAACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATATGCAGCCTTCTGCATaGTGCACTCAGGAAGTTCCA | + |
Preference number: 4 (lower is better) Translates to: QDSPRMGRGLTLGTPLPDMQPSA*CTQEVP Trigger: TGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCAT...ATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCATGCAGCCTTCTGCATaGTGCACTCAGGAAGTTCCA | + |
Preference number: 4 (lower is better) Translates to: ALSGLLGRILAADLWRVTMQPSA*CTQEVP Trigger: TGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCAT...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | TGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCAGGAGCAGGCAGAACTTaGGTAATCACTGTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: WHCQVYWGGSLRLIYGESGAGRT*VITVQG Trigger: TCCCTGGACAGTGATTACCCAAGTTCTGCCTGCTCC...TGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | ACTTACCTTAGGGACACCATTACCAGATTAGAGTCCCTCGGTCCGCAGTTTATGGGATGCTGGGCCGGGTaGGCTCTTGTCCTCACAGTT | + |
Preference number: 4 (lower is better) Translates to: TYLRDTITRLESLGPQFMGCWAG*ALVLTV Trigger: AACTGTGAGGACAAGAGCCCACCCGGCCCAGCATCC...CATAAACTGCGGACCGAGGGACTCTAATCTGGTAATGGTGTCCCTAAGGTAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCCGTGCGCACCCTCTTaGATGCTGGGCCGGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVPCAPS*MLGRVG Trigger: GCCCACCCGGCCCAGCATCCAAGAGGGTGCGCACGG...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGCGCCGTTGCTCGCCATaGGGTGAGGCTCGAACTCGG | + |
Preference number: 4 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLRRCSP*GEARTR Trigger: CCGAGTTCGAGCCTCACCCCATGGCGAGCAACGGCG...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | TCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATCATACAGCTACCATTaGGTTCAGCTCCTTTGTGGG | + |
Preference number: 4 (lower is better) Translates to: SGLATDGSRTYLRDTITRSYSYH*VQLLCG Trigger: CCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGA...TCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | GGGTCGAGGACTTACCTTAGGGACACCATTACCAGATTAGAGTCCCTCGGTCCGTTTGCTGATGGTGGATaGAGAGCTAGAAGCACTGAG | + |
Preference number: 4 (lower is better) Translates to: GSRTYLRDTITRLESLGPFADGG*RARSTE Trigger: CTCAGTGCTTCTAGCTCTTCATCCACCATCAGCAAA...CGGACCGAGGGACTCTAATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | TACAGATTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAACGAAGCCGCCGCCGTTaGTCGCCATGGGGTGAGGCT | + |
Preference number: 4 (lower is better) Translates to: YRLFSPMQSLQEGTEHYKRSRRR*SPWGEA Trigger: AGCCTCACCCCATGGCGAGCAACGGCGGCGGCTTCG...TTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAATCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCGAAGCCGCCGCCGTTaGTCGCCATGGGGTGAGGCT | + |
Preference number: 4 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVRSRRR*SPWGEA Trigger: AGCCTCACCCCATGGCGAGCAACGGCGGCGGCTTCG...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGACCAATACACCGGGCTGCCCTaGAGGTTGGCGCTGGCGAAG | + |
Preference number: 4 (lower is better) Translates to: HQPWLQLFKTILSTSSDQYTGLP*RLALAK Trigger: CTTCGCCAGCGCCAACCTGCAGGGCAGCCCGGTGTA...TTGGTCTGAACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATCACCCTTGGTCTTCTTaGCAGGCACTCCACTTCCAG | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYHPWSS*QALHFQ Trigger: CTGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTG...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTAGAGGTGGCCCAGATTaGAGACCGGCCCGGACGTGG | + |
Preference number: 4 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVRGGPD*RPARTW Trigger: CCACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCT...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | ACTTACCTTAGGGACACCATTACCAGATTAGAGTCCCTCGGTCCGCAGTTTATGCCGTACATATTGGGCTaGGATTTGGCGAAAGCGGGC | + |
Preference number: 4 (lower is better) Translates to: TYLRDTITRLESLGPQFMPYILG*DLAKAG Trigger: GCCCGCTTTCGCCAAATCGCAGCCCAATATGTACGG...CATAAACTGCGGACCGAGGGACTCTAATCTGGTAATGGTGTCCCTAAGGTAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCAGCCATATGTGTCAGTaGCTTTGCTATATCCGTAGC | + |
Preference number: 4 (lower is better) Translates to: ALSGLLGRILAADLWRVTSHMCQ*LCYIRS Trigger: GCTACGGATATAGCAAAGCCACTGACACATATGGCT...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATCCAGGCCGTACATATTaGGCTGCGATTTGGCGAAAG | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYPGRTY*AAIWRK Trigger: CTTTCGCCAAATCGCAGCCCAATATGTACGGCCTGG...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR CAA 72 bp | AGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTaGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: SLWHCQVYWGGS*RLIYGESPKGG Trigger: TCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATTGGGTTCTCGTAGTATaGAGCCTTCTGCATGGTGCA | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYWVLVV*SLLHGA Trigger: TGCACCATGCAGAAGGCTGCATACTACGAGAACCCA...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGACCAAGGCAGCAGCAGGGGGTaGGTAAGGCTGATGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: HQPWLQLFKTILSTSSDQGSSRG*VRLMRS Trigger: ACTCCTCATCAGCCTTACCCACCCCCTGCTGCTGCC...TTGGTCTGAACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | GACAGAGTGATCTGCTTGCAGATGTGTGCGATTAACACAGATACACTTCCAACTAACTGTAGTCCACGCTaGCCGAAGACGGGTGCGAGA | + |
Preference number: 4 (lower is better) Translates to: DRVICLQMCAINTDTLPTNCSPR*PKTGAR Trigger: TCTCGCACCCGTCTTCGGCCAGCGTGGACTACAGTT...AGTTGGAAGTGTATCTGTGTTAATCGCACACATCTGCAAGCAGATCACTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATTCATACAGCTACCATTaGGTTCAGCTCCTTTGTGGG | + |
Preference number: 4 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYSYSYH*VQLLCG Trigger: CCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGA...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGCCGTACATATTGGGCTaGGATTTGGCGAAAGCGGGC | + |
Preference number: 4 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLPYILG*DLAKAG Trigger: GCCCGCTTTCGCCAAATCGCAGCCCAATATGTACGG...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTGGCAGCAGCAGGGGGTaGGTAAGGCTGATGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVGSSRG*VRLMRS Trigger: ACTCCTCATCAGCCTTACCCACCCCCTGCTGCTGCC...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTAGTTCAGCTCCTTTGTaGGCTGGGGCTCGGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVSSAPL*AGARRG Trigger: ACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACT...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CTCAGTTTTAAGAGCTTAAATGTAATCAAGTATTTCTCCACGCCAATTTTGTGCCGGACGTGGGCGCCATaGAGTCGACGAAGTTGCCGC | + |
Preference number: 4 (lower is better) Translates to: LSFKSLNVIKYFSTPILCRTWAP*SRRSCR Trigger: GCGGCAACTTCGTCGACTCCATGGCGCCCACGTCCG...GCACAAAATTGGCGTGGAGAAATACTTGATTACATTTAAGCTCTTAAAACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGCCTTCTGCATGGTaGACTCAGGAAGTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVQPSAW*TQEVPG Trigger: CCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTG...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CCA 90 bp | CACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGACCAACCAGGCCGTACATATTaGGCTGCGATTTGGCGAAAG | + |
Preference number: 4 (lower is better) Translates to: HQPWLQLFKTILSTSSDQPGRTY*AAIWRK Trigger: CTTTCGCCAAATCGCAGCCCAATATGTACGGCCTGG...TTGGTCTGAACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
3UTR CAA 72 bp | GGGATCATACAGAGGGATGAAGACAGAGTGATCTGCTaGCAGATGTGTGCGATTAACACAGATACACTTCCA | + |
Preference number: 4 (lower is better) Translates to: GIIQRDEDRVIC*QMCAINTDTLP Trigger: TGGAAGTGTATCTGTGTTAATCGCACACATCTGCAAGCAGATCACTCTGTCTTCATCCCTCTGTATGATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | CACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGACCAATTTGCTGATGGTGGATaGAGAGCTAGAAGCACTGAG | + |
Preference number: 4 (lower is better) Translates to: HQPWLQLFKTILSTSSDQFADGG*RARSTE Trigger: CTCAGTGCTTCTAGCTCTTCATCCACCATCAGCAAA...TTGGTCTGAACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR GCA 90 bp | TACAGATTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATGGGTTCTCGTAGTATaGAGCCTTCTGCATGGTGCA | + |
Preference number: 4 (lower is better) Translates to: YRLFSPMQSLQEGTEHYKWVLVV*SLLHGA Trigger: TGCACCATGCAGAAGGCTGCATACTACGAGAACCCA...TTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAATCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR TCA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCATACAGCTACCATTaGGTTCAGCTCCTTTGTGGG | + |
Preference number: 4 (lower is better) Translates to: LFSPMQSLQEGTEHYKLRSYSYH*VQLLCG Trigger: CCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGA...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 90 bp | GCGGCGCCGTGTAGGCGGCCAGGCCGTACATATTGGGCTGCGATTTaGCGAAAGCGGGCGGCGAGGGTGCGTCGTAGGCCAGGCCGGGCA | + |
Preference number: 5 (lower is better) Translates to: AAPCRRPGRTYWAAI*RKRAARVRRRPGRA Trigger: TGCCCGGCCTGGCCTACGACGCACCCTCGCCGCCCGCTTTCGCCAAATCGCAGCCCAATATGTACGGCCTGGCCGCCTACACGGCGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 90 bp | CGAACTCGGGCGCCGGGTACCGCTTCTGCTGAGGCAGGCAGCTGCTaGGCGGCGCCGTGTAGGCGGCCAGGCCGTACATATTGGGCTGCG | + |
Preference number: 5 (lower is better) Translates to: RTRAPGTASAEAGSC*AAPCRRPGRTYWAA Trigger: CGCAGCCCAATATGTACGGCCTGGCCGCCTACACGGCGCCGCTCAGCAGCTGCCTGCCTCAGCAGAAGCGGTACCCGGCGCCCGAGTTCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 90 bp | GCCGTACATATTGGGCTGCGATTTGGCGAAAGCGGGCGGCGAGGGTaGGTCGTAGGCCAGGCCGGGCACCGGCGGCAGCTGGCCGGAGTA | + |
Preference number: 5 (lower is better) Translates to: AVHIGLRFGESGRRG*VVGQAGHRRQLAGV Trigger: TACTCCGGCCAGCTGCCGCCGGTGCCCGGCCTGGCCTACGACGCACCCTCGCCGCCCGCTTTCGCCAAATCGCAGCCCAATATGTACGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 90 bp | CAGCTGGCCGGAGTAAGCCACGTGGCCCGCCGCTCCTCCAAGAGGTaGGCTGCGCTCCGGGGACTGACCGGCTGGAGAATGCAGGATGCC | + |
Preference number: 5 (lower is better) Translates to: QLAGVSHVARRSSKR*AALRGLTGWRMQDA Trigger: GGCATCCTGCATTCTCCAGCCGGTCAGTCCCCGGAGCGCAGCCCACCTCTTGGAGGAGCGGCGGGCCACGTGGCTTACTCCGGCCAGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCAATGGAGTCGACGAAGTaGCCGCCCACGTACACCGGG | + |
Preference number: 5 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPMESTK*PPTYTG Trigger: CCCGGTGTACGTGGGCGGCAACTTCGTCGACTCCAT...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGGTTCAGACCAGGGGGTaGGTTGCCACCACCTCCACC | + |
Preference number: 5 (lower is better) Translates to: PGGRPSRVSPGRWKPLVRVQTRG*VATTST Trigger: GGTGGAGGTGGTGGCAACCAACCCCCTGGTCTGAAC...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GGCCGCTGGAAGCCACTCGTGAGGCATCCGCCAGGCCAGATCAGGGAGGGGGATAGACCAGGGGGTTGGTaGCCACCACCTCCACCCTGG | + |
Preference number: 5 (lower is better) Translates to: GRWKPLVRHPPGQIREGDRPGGW*PPPPPW Trigger: CCAGGGTGGAGGTGGTGGCAACCAACCCCCTGGTCT...ATCCCCCTCCCTGATCTGGCCTGGCGGATGCCTCACGAGTGGCTTCCAGCGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | AAAGGAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGGGCCGGGTGGGCTCTaGTCCTCACAGTTCTCTCCT | + |
Preference number: 5 (lower is better) Translates to: KGGRAWREAQSRQPWPLEGPGGL*SSQFSP Trigger: AGGAGAGAACTGTGAGGACAAGAGCCCACCCGGCCC...TTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGATATTGGGCTGCGATTaGGCGAAAGCGGGCGGCGAG | + |
Preference number: 5 (lower is better) Translates to: PGGRPSRVSPGRWKPLVRILGCD*AKAGGE Trigger: CTCGCCGCCCGCTTTCGCCAAATCGCAGCCCAATAT...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 90 bp | ACGTGGCCCGCCGCTCCTCCAAGAGGTGGGCTGCGCTCCGGGGACTaGCCGGCTGGAGAATGCAGGATGCCCTTAGCCTTCTGGTCCTTC | + |
Preference number: 5 (lower is better) Translates to: TWPAAPPRGGLRSGD*PAGECRMPLAFWSF Trigger: GAAGGACCAGAAGGCTAAGGGCATCCTGCATTCTCCAGCCGGTCAGTCCCCGGAGCGCAGCCCACCTCTTGGAGGAGCGGCGGGCCACGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCATGGAGCAGGCAGAACTaGGGTAATCACTGTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPWSRQN*GNHCPG Trigger: CCCTGGACAGTGATTACCCAAGTTCTGCCTGCTCCA...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCAACTCCACTTCCAGGATaGGTAGGTGAAGATGGGGGC | + |
Preference number: 5 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPTPLPG*VGEDGG Trigger: GCCCCCATCTTCACCTACCAATCCTGGAAGTGGAGT...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 90 bp | TGTAGTCCACGCTGGCCGAAGACGGGTGCGAGAGGTGGCCCAGATTaGAGACCGGCCCGGACGTGGGCGCCATGGAGTCGACGAAGTTGC | + |
Preference number: 5 (lower is better) Translates to: CSPRWPKTGARGGPD*RPARTWAPWSRRSC Trigger: GCAACTTCGTCGACTCCATGGCGCCCACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCTCGCACCCGTCTTCGGCCAGCGTGGACTACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | AAAGGAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAACCACCCTTGGTCTTCTaGGCAGGCACTCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: KGGRAWREAQSRQPWPLEPPLVF*AGTPLP Trigger: TGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTGG...TTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTCCTTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCCTCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTGGGCTGCCCTGCAGGTaGGCGCTGGCGAAGCCGCCG | + |
Preference number: 5 (lower is better) Translates to: PSSGLATDGSRTYLRDTIGLPCR*ALAKPP Trigger: CGGCGGCTTCGCCAGCGCCAACCTGCAGGGCAGCCC...AATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGAGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GAGGACGCGCCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACAGGGGAAGATCTGTTaGCTGATGGTGGATGAAGAG | + |
Preference number: 5 (lower is better) Translates to: EDAPGGRPSRVSPGRWKPQGKIC*LMVDEE Trigger: CTCTTCATCCACCATCAGCAAACAGATCTTCCCCTG...TGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGGCGCGTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | ACACCCGCCCATGTGACGATCATGTATAGAAAGAGCATGCAGGCGCTGCTCTGGGGGCTGCCCTGCAGGTaGGCGCTGGCGAAGCCGCCG | + |
Preference number: 5 (lower is better) Translates to: TPAHVTIMYRKSMQALLWGLPCR*ALAKPP Trigger: CGGCGGCTTCGCCAGCGCCAACCTGCAGGGCAGCCC...CCAGAGCAGCGCCTGCATGCTCTTTCTATACATGATCGTCACATGGGCGGGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCTGGAGGGAGGCCCAGTCGCGTCAGCCCTGGCCGCTGGAAGCCACTCGTGAGGCAGCTGTTCTTCTGCTaGGAGTTCTGTCGGGATTCT | + |
Preference number: 5 (lower is better) Translates to: PGGRPSRVSPGRWKPLVRQLFFC*EFCRDS Trigger: AGAATCCCGACAGAACTCCAAGCAGAAGAACAGCTG...CCTCACGAGTGGCTTCCAGCGGCCAGGGCTGACGCGACTGGGCCTCCCTCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCGCCGTGCGCACCCTCTaGGATGCTGGGCCGGGTGGG | + |
Preference number: 5 (lower is better) Translates to: SSGLATDGSRTYLRDTITAVRTL*DAGPGG Trigger: CCCACCCGGCCCAGCATCCAAGAGGGTGCGCACGGC...GGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CACCACCTCTGCCACCAAAACCAGAGAGGTAATTGCGCCTGGCCGGCGGCAACAGTTCAGACCAGGGGGTaGGTTGCCACCACCTCCACC | + |
Preference number: 5 (lower is better) Translates to: HHLCHQNQRGNCAWPAATVQTRG*VATTST Trigger: GGTGGAGGTGGTGGCAACCAACCCCCTGGTCTGAAC...TGTTGCCGCCGGCCAGGCGCAATTACCTCTCTGGTTTTGGTGGCAGAGGTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGGCCTACAGATGTGTCAGTTaGGGGGCCTCGGGCAGGCGT | + |
Preference number: 5 (lower is better) Translates to: LRLIYGESPKGGRAWREAYRCVS*GASGRR Trigger: ACGCCTGCCCGAGGCCCCCAAACTGACACATCTGTA...GGCCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGAAGACCAGGGGGTTGGTaGCCACCACCTCCACCCTGG | + |
Preference number: 5 (lower is better) Translates to: SGLATDGSRTYLRDTITRRPGGW*PPPPPW Trigger: CCAGGGTGGAGGTGGTGGCAACCAACCCCCTGGTCT...TCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCAGACCAGGGGGTTGGTaGCCACCACCTCCACCCTGG | + |
Preference number: 5 (lower is better) Translates to: ALSGLLGRILAADLWRVTRPGGW*PPPPPW Trigger: CCAGGGTGGAGGTGGTGGCAACCAACCCCCTGGTCT...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATGAGAGGTGGCCCAGATaGAAGACCGGCCCGGACGTG | + |
Preference number: 5 (lower is better) Translates to: QDSPRMGRGLTLGTPLPDERWPR*KTGPDV Trigger: CACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCTC...ATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 90 bp | CTCCACCCTGGCTATTCCCAGTGCCAGGTCTCATACAGCTACCATTaGGTTCAGCTCCTTTGTGGGCTGGGGCTCGGAGAGGTGCAGAGC | + |
Preference number: 5 (lower is better) Translates to: LHPGYSQCQVSYSYH*VQLLCGLGLGEVQS Trigger: GCTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAGACCTGGCACTGGGAATAGCCAGGGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCGGGCCGGGTGGGCTCTaGTCCTCACAGTTCTCTCCT | + |
Preference number: 5 (lower is better) Translates to: ALSGLLGRILAADLWRVTGPGGL*SSQFSP Trigger: AGGAGAGAACTGTGAGGACAAGAGCCCACCCGGCCC...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCAGTTCAGACCAGGGGGTaGGTTGCCACCACCTCCACC | + |
Preference number: 5 (lower is better) Translates to: WHCQVYWGGSLRLIYGESVQTRG*VATTST Trigger: GGTGGAGGTGGTGGCAACCAACCCCCTGGTCTGAAC...TGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCCTCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTCCACCCTTGGTCTTCTaGGCAGGCACTCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: PSSGLATDGSRTYLRDTIPPLVF*AGTPLP Trigger: TGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTGG...AATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTAGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCGGGCCGGGTGGGCTCTaGTCCTCACAGTTCTCTCCT | + |
Preference number: 5 (lower is better) Translates to: LESLGPQFMALSGLLGRIGPGGL*SSQFSP Trigger: AGGAGAGAACTGTGAGGACAAGAGCCCACCCGGCCC...GATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCATATTGGGCTGCGATTaGGCGAAAGCGGGCGGCGAG | + |
Preference number: 5 (lower is better) Translates to: ALSGLLGRILAADLWRVTILGCD*AKAGGE Trigger: CTCGCCGCCCGCTTTCGCCAAATCGCAGCCCAATAT...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTAGAGAGGTGGCCCAGATaGAAGACCGGCCCGGACGTG | + |
Preference number: 5 (lower is better) Translates to: PQFMALSGLLGRILAADLERWPR*KTGPDV Trigger: CACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCTC...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCCTCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTATGGTTGCCAGGGATTaGCGCGGCGCAACTGTAGTC | + |
Preference number: 5 (lower is better) Translates to: PSSGLATDGSRTYLRDTIMVARD*RGATVV Trigger: GACTACAGTTGCGCCGCGCAAATCCCTGGCAACCAT...AATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TCTTCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCTACAGATGTGTCAGTTaGGGGGCCTCGGGCAGGCGT | + |
Preference number: 5 (lower is better) Translates to: SSGLATDGSRTYLRDTITYRCVS*GASGRR Trigger: ACGCCTGCCCGAGGCCCCCAAACTGACACATCTGTA...GGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 90 bp | CCAGGGAGTTGGCAGCAGCAGGGGGTGGGTAAGGCTGATGAGGAGTaGTGTAGCCATATGTGTCAGTGGCTTTGCTATATCCGTAGCCTC | + |
Preference number: 5 (lower is better) Translates to: PGSWQQQGVGKADEE*CSHMCQWLCYIRSL Trigger: GAGGCTACGGATATAGCAAAGCCACTGACACATATGGCTACAGCACTCCTCATCAGCCTTACCCACCCCCTGCTGCTGCCAACTCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS GCA 90 bp | GCTACCATTGAGTTCAGCTCCTTTGTGGGCTGGGGCTCGGAGAGGTaGAGAGCTCTGGATGGAGCAGGCAGAACTTGGGTAATCACTGTC | + |
Preference number: 5 (lower is better) Translates to: ATIEFSSFVGWGSER*RALDGAGRTWVITV Trigger: GACAGTGATTACCCAAGTTCTGCCTGCTCCATCCAGAGCTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTGCGGCTGATTTATGGCGAGTCACCCAAAGGAGGACGCGCCTGGAGGGAGGCCCTCATACAGCTACCATaGAGTTCAGCTCCTTTGTGG | + |
Preference number: 5 (lower is better) Translates to: LRLIYGESPKGGRAWREALIQLP*SSAPLW Trigger: CCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAG...GGCCTCCCTCCAGGCGCGTCCTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGGCGAGTCACCATGGTTGCCAGGGATTaGCGCGGCGCAACTGTAGTC | + |
Preference number: 5 (lower is better) Translates to: ALSGLLGRILAADLWRVTMVARD*RGATVV Trigger: GACTACAGTTGCGCCGCGCAAATCCCTGGCAACCAT...GGTGACTCGCCATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 90 bp | AGAACTTGGGTAATCACTGTCCAGGGAGTTGGCAGCAGCAGGGGGTaGGTAAGGCTGATGAGGAGTGCTGTAGCCATATGTGTCAGTGGC | + |
Preference number: 5 (lower is better) Translates to: RTWVITVQGVGSSRG*VRLMRSAVAICVSG Trigger: GCCACTGACACATATGGCTACAGCACTCCTCATCAGCCTTACCCACCCCCTGCTGCTGCCAACTCCCTGGACAGTGATTACCCAAGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CCA 90 bp | TGCTCTGAGTTCAGACCAGGGGGTTGGTTGCCACCACCTCCACCCTaGCTATTCCCAGTGCCAGGTCTCATACAGCTACCATTGAGTTCA | + |
Preference number: 5 (lower is better) Translates to: CSEFRPGGWLPPPPP*LFPVPGLIQLPLSS Trigger: TGAACTCAATGGTAGCTGTATGAGACCTGGCACTGGGAATAGCCAGGGTGGAGGTGGTGGCAACCAACCCCCTGGTCTGAACTCAGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTAGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCTTGAGTTCAGCTCCTTaGTGGGCTGGGGCTCGGAGA | + |
Preference number: 5 (lower is better) Translates to: LESLGPQFMALSGLLGRILSSAP*WAGARR Trigger: TCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAA...GATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CACCACCTCTGCCACCAAAACCAGAGAGGTAATTGCGCCTGGCCGGCGGCAACACTCATACAGCTACCATaGAGTTCAGCTCCTTTGTGG | + |
Preference number: 5 (lower is better) Translates to: HHLCHQNQRGNCAWPAATLIQLP*SSAPLW Trigger: CCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAG...TGTTGCCGCCGGCCAGGCGCAATTACCTCTCTGGTTTTGGTGGCAGAGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGATACTCCACTTCCAGGATaGGTAGGTGAAGATGGGGGC | + |
Preference number: 5 (lower is better) Translates to: QDSPRMGRGLTLGTPLPDTPLPG*VGEDGG Trigger: GCCCCCATCTTCACCTACCAATCCTGGAAGTGGAGT...ATCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGAGCCAGGCCGTACATATaGGGCTGCGATTTGGCGAAA | + |
Preference number: 5 (lower is better) Translates to: SGLATDGSRTYLRDTITRARPYI*GCDLAK Trigger: TTTCGCCAAATCGCAGCCCAATATGTACGGCCTGGC...TCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTGGGCTGCCCTGCAGGTaGGCGCTGGCGAAGCCGCCG | + |
Preference number: 5 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVGLPCR*ALAKPP Trigger: CGGCGGCTTCGCCAGCGCCAACCTGCAGGGCAGCCC...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTGCCGTGCGCACCCTCTaGGATGCTGGGCCGGGTGGG | + |
Preference number: 5 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVAVRTL*DAGPGG Trigger: CCCACCCGGCCCAGCATCCAAGAGGGTGCGCACGGC...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGGCCGTGCGCACCCTCTaGGATGCTGGGCCGGGTGGG | + |
Preference number: 5 (lower is better) Translates to: LFSPMQSLQEGTEHYKLRAVRTL*DAGPGG Trigger: CCCACCCGGCCCAGCATCCAAGAGGGTGCGCACGGC...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATATATTGGGCTGCGATTaGGCGAAAGCGGGCGGCGAG | + |
Preference number: 5 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYILGCD*AKAGGE Trigger: CTCGCCGCCCGCTTTCGCCAAATCGCAGCCCAATAT...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATTACAGATGTGTCAGTTaGGGGGCCTCGGGCAGGCGT | + |
Preference number: 5 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYYRCVS*GASGRR Trigger: ACGCCTGCCCGAGGCCCCCAAACTGACACATCTGTA...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 90 bp | AGCCTCCAAAGAGTCCTGGGTTCTCGTAGTATGCAGCCTTCTGCATaGTGCACTCAGGAAGTTCCAGGGTCAGCTGACCCTGCTCAAATA | + |
Preference number: 5 (lower is better) Translates to: SLQRVLGSRSMQPSA*CTQEVPGSADPAQI Trigger: TATTTGAGCAGGGTCAGCTGACCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGACTCTTTGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CCA 90 bp | GGGGTGGGTAAGGCTGATGAGGAGTGCTGTAGCCATATGTGTCAGTaGCTTTGCTATATCCGTAGCCTCCAAAGAGTCCTGGGTTCTCGT | + |
Preference number: 5 (lower is better) Translates to: GVGKADEECCSHMCQ*LCYIRSLQRVLGSR Trigger: ACGAGAACCCAGGACTCTTTGGAGGCTACGGATATAGCAAAGCCACTGACACATATGGCTACAGCACTCCTCATCAGCCTTACCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS-3UTR CAA 90 bp | TCAGGACTCGCCACGGATGGGTCGAGGACTTACCTTAGGGACACCATTACCAGACAGGGGAAGATCTGTTaGCTGATGGTGGATGAAGAG | + |
Preference number: 5 (lower is better) Translates to: SGLATDGSRTYLRDTITRQGKIC*LMVDEE Trigger: CTCTTCATCCACCATCAGCAAACAGATCTTCCCCTG...TCTGGTAATGGTGTCCCTAAGGTAAGTCCTCGACCCATCCGTGGCGAGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | ACACCCGCCCATGTGACGATCATGTATAGAAAGAGCATGCAGGCGCTGCTCTGGCAGCTGTTCTTCTGCTaGGAGTTCTGTCGGGATTCT | + |
Preference number: 5 (lower is better) Translates to: TPAHVTIMYRKSMQALLWQLFFC*EFCRDS Trigger: AGAATCCCGACAGAACTCCAAGCAGAAGAACAGCTG...CCAGAGCAGCGCCTGCATGCTCTTTCTATACATGATCGTCACATGGGCGGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | GACAGAGTGATCTGCTTGCAGATGTGTGCGATTAACACAGATACACTTCCAACTGAGAGGTGGCCCAGATaGAAGACCGGCCCGGACGTG | + |
Preference number: 5 (lower is better) Translates to: DRVICLQMCAINTDTLPTERWPR*KTGPDV Trigger: CACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCTC...AGTTGGAAGTGTATCTGTGTTAATCGCACACATCTGCAAGCAGATCACTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111983.9 |
||
CDS GCA 90 bp | CTCCAAAGAGTCCTGGGTTCTCGTAGTATGCAGCCTTCTGCATGGTaGACTCAGGAAGTTCCAGGGTCAGCTGACCCTGCTCAAATAACA | + |
Preference number: 5 (lower is better) Translates to: LQRVLGSRSMQPSAW*TQEVPGSADPAQIT Trigger: TGTTATTTGAGCAGGGTCAGCTGACCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGACTCTTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS GCA 90 bp | TTTGCTATATCCGTAGCCTCCAAAGAGTCCTGGGTTCTCGTAGTATaGAGCCTTCTGCATGGTGCACTCAGGAAGTTCCAGGGTCAGCTG | + |
Preference number: 5 (lower is better) Translates to: FAISVASKESWVLVV*SLLHGALRKFQGQL Trigger: CAGCTGACCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGACTCTTTGGAGGCTACGGATATAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS-3UTR CAA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATACTCCACTTCCAGGATaGGTAGGTGAAGATGGGGGC | + |
Preference number: 5 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYTPLPG*VGEDGG Trigger: GCCCCCATCTTCACCTACCAATCCTGGAAGTGGAGT...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTATGCCAGGCCGTACATATaGGGCTGCGATTTGGCGAAA | + |
Preference number: 5 (lower is better) Translates to: RSLWHCQVYWGGSLRLIYARPYI*GCDLAK Trigger: TTTCGCCAAATCGCAGCCCAATATGTACGGCCTGGC...ATAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGATGGAGTCGACGAAGTaGCCGCCCACGTACACCGGG | + |
Preference number: 5 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLMESTK*PPTYTG Trigger: CCCGGTGTACGTGGGCGGCAACTTCGTCGACTCCAT...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTAGAGTCCCTCGGTCCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTCATACAGCTACCATaGAGTTCAGCTCCTTTGTGG | + |
Preference number: 5 (lower is better) Translates to: LESLGPQFMALSGLLGRILIQLP*SSAPLW Trigger: CCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAG...GATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGGACCGAGGGACTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CCGCAGTTTATGGCACTGTCAGGTTTACTGGGGAGGATCCTTGCGGCTGATTTACAGCTGTTCTTCTGCTaGGAGTTCTGTCGGGATTCT | + |
Preference number: 5 (lower is better) Translates to: PQFMALSGLLGRILAADLQLFFC*EFCRDS Trigger: AGAATCCCGACAGAACTCCAAGCAGAAGAACAGCTG...TAAATCAGCCGCAAGGATCCTCCCCAGTAAACCTGACAGTGCCATAAACTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 90 bp | GGTAAGGCTGATGAGGAGTGCTGTAGCCATATGTGTCAGTGGCTTTaGTATATCCGTAGCCTCCAAAGAGTCCTGGGTTCTCGTAGTATG | + |
Preference number: 5 (lower is better) Translates to: GKADEECCSHMCQWL*YIRSLQRVLGSRSM Trigger: CATACTACGAGAACCCAGGACTCTTTGGAGGCTACGGATATAGCAAAGCCACTGACACATATGGCTACAGCACTCCTCATCAGCCTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CCA 90 bp | ATATGTGTCAGTGGCTTTGCTATATCCGTAGCCTCCAAAGAGTCCTaGGTTCTCGTAGTATGCAGCCTTCTGCATGGTGCACTCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: ICVSGFAISVASKES*VLVVCSLLHGALRK Trigger: CTTCCTGAGTGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGACTCTTTGGAGGCTACGGATATAGCAAAGCCACTGACACATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS-3UTR CAA 90 bp | TACAGATTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAAATGGAGTCGACGAAGTaGCCGCCCACGTACACCGGG | + |
Preference number: 5 (lower is better) Translates to: YRLFSPMQSLQEGTEHYKMESTK*PPTYTG Trigger: CCCGGTGTACGTGGGCGGCAACTTCGTCGACTCCAT...TTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAATCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGATGGTTGCCAGGGATTaGCGCGGCGCAACTGTAGTC | + |
Preference number: 5 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLMVARD*RGATVV Trigger: GACTACAGTTGCGCCGCGCAAATCCCTGGCAACCAT...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | CACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTCAGACCAACCACCCTTGGTCTTCTaGGCAGGCACTCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: HQPWLQLFKTILSTSSDQPPLVF*AGTPLP Trigger: TGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTGG...TTGGTCTGAACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | AGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTCTCTGGCCAGGCCGTACATATaGGGCTGCGATTTGGCGAAA | + |
Preference number: 5 (lower is better) Translates to: SPMQSLQEGTEHYKLRSLARPYI*GCDLAK Trigger: TTTCGCCAAATCGCAGCCCAATATGTACGGCCTGGC...CAGAGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTTGAGTTCAGCTCCTTaGTGGGCTGGGGCTCGGAGA | + |
Preference number: 5 (lower is better) Translates to: LFSPMQSLQEGTEHYKLRLSSAP*WAGARR Trigger: TCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAA...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | TTGTTTAGTCCGATGCAATCTTTACAGGAGGGGACGGAGCATTATAAATTAAGGTGGAGCAGGCAGAACTaGGGTAATCACTGTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: LFSPMQSLQEGTEHYKLRWSRQN*GNHCPG Trigger: CCCTGGACAGTGATTACCCAAGTTCTGCCTGCTCCA...CCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGACTAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS-3UTR CAA 90 bp | ACTACAGACACCAGCCATGGTTACAACTGTTCAAAACTATCCTCTCAACTAGTTTGGAGCAGGCAGAACTaGGGTAATCACTGTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: TTDTSHGYNCSKLSSQLVWSRQN*GNHCPG Trigger: CCCTGGACAGTGATTACCCAAGTTCTGCCTGCTCCA...AACTAGTTGAGAGGATAGTTTTGAACAGTTGTAACCATGGCTGGTGTCTGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 72 bp | GCGCTGGCGAAGCCGCCGCCGTTGCTCGCCATGGGGTaGGGCTCGAACTCGGGCGCCGGGTACCGCTTCTGC | + |
Preference number: 6 (lower is better) Translates to: ALAKPPPLLAMG*GSNSGAGYRFC Trigger: GCAGAAGCGGTACCCGGCGCCCGAGTTCGAGCCTCACCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 72 bp | TGCCCTGCAGGTTGGCGCTGGCGAAGCCGCCGCCGTTaGTCGCCATGGGGTGAGGCTCGAACTCGGGCGCCG | + |
Preference number: 6 (lower is better) Translates to: CPAGWRWRSRRR*SPWGEARTRAP Trigger: CGGCGCCCGAGTTCGAGCCTCACCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGCCAACCTGCAGGGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | GGTTGGCGCTGGCGAAGCCGCCGCCGTTGCTCGCCATaGGGTGAGGCTCGAACTCGGGCGCCGGGTACCGCT | + |
Preference number: 6 (lower is better) Translates to: GWRWRSRRRCSP*GEARTRAPGTA Trigger: AGCGGTACCCGGCGCCCGAGTTCGAGCCTCACCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGCCAACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 72 bp | GCGCCGGGTACCGCTTCTGCTGAGGCAGGCAGCTGCTaGGCGGCGCCGTGTAGGCGGCCAGGCCGTACATAT | + |
Preference number: 6 (lower is better) Translates to: APGTASAEAGSC*AAPCRRPGRTY Trigger: ATATGTACGGCCTGGCCGCCTACACGGCGCCGCTCAGCAGCTGCCTGCCTCAGCAGAAGCGGTACCCGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 72 bp | CGCTGGCCGAAGACGGGTGCGAGAGGTGGCCCAGATTaGAGACCGGCCCGGACGTGGGCGCCATGGAGTCGA | + |
Preference number: 6 (lower is better) Translates to: RWPKTGARGGPD*RPARTWAPWSR Trigger: TCGACTCCATGGCGCCCACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCTCGCACCCGTCTTCGGCCAGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 72 bp | AAGCCACGTGGCCCGCCGCTCCTCCAAGAGGTGGGCTaGGCTCCGGGGACTGACCGGCTGGAGAATGCAGGA | + |
Preference number: 6 (lower is better) Translates to: KPRGPPLLQEVG*APGTDRLENAG Trigger: TCCTGCATTCTCCAGCCGGTCAGTCCCCGGAGCGCAGCCCACCTCTTGGAGGAGCGGCGGGCCACGTGGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | GGAGTAAGCCACGTGGCCCGCCGCTCCTCCAAGAGGTaGGCTGCGCTCCGGGGACTGACCGGCTGGAGAATG | + |
Preference number: 6 (lower is better) Translates to: GVSHVARRSSKR*AALRGLTGWRM Trigger: CATTCTCCAGCCGGTCAGTCCCCGGAGCGCAGCCCACCTCTTGGAGGAGCGGCGGGCCACGTGGCTTACTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CAA 72 bp | ACGCTGGCCGAAGACGGGTGCGAGAGGTGGCCCAGATaGAAGACCGGCCCGGACGTGGGCGCCATGGAGTCG | + |
Preference number: 6 (lower is better) Translates to: TLAEDGCERWPR*KTGPDVGAMES Trigger: CGACTCCATGGCGCCCACGTCCGGGCCGGTCTTCAATCTGGGCCACCTCTCGCACCCGTCTTCGGCCAGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 72 bp | GCCGCTCCTCCAAGAGGTGGGCTGCGCTCCGGGGACTaGCCGGCTGGAGAATGCAGGATGCCCTTAGCCTTC | + |
Preference number: 6 (lower is better) Translates to: AAPPRGGLRSGD*PAGECRMPLAF Trigger: GAAGGCTAAGGGCATCCTGCATTCTCCAGCCGGTCAGTCCCCGGAGCGCAGCCCACCTCTTGGAGGAGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | TGTAGGCGGCCAGGCCGTACATATTGGGCTGCGATTTaGCGAAAGCGGGCGGCGAGGGTGCGTCGTAGGCCA | + |
Preference number: 6 (lower is better) Translates to: CRRPGRTYWAAI*RKRAARVRRRP Trigger: TGGCCTACGACGCACCCTCGCCGCCCGCTTTCGCCAAATCGCAGCCCAATATGTACGGCCTGGCCGCCTACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | GTACGCCGTGCGCACCCTCTTGGATGCTGGGCCGGGTaGGCTCTTGTCCTCACAGTTCTCTCCTCCATCCCT | + |
Preference number: 6 (lower is better) Translates to: VRRAHPLGCWAG*ALVLTVLSSIP Trigger: AGGGATGGAGGAGAGAACTGTGAGGACAAGAGCCCACCCGGCCCAGCATCCAAGAGGGTGCGCACGGCGTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140666.2 |
||
CDS CAA 72 bp | AGGGTCGCAGGGTCCGTGGTGATGGTTGCCAGGGATTaGCGCGGCGCAACTGTAGTCCACGCTGGCCGAAGA | + |
Preference number: 6 (lower is better) Translates to: RVAGSVVMVARD*RGATVVHAGRR Trigger: TCTTCGGCCAGCGTGGACTACAGTTGCGCCGCGCAAATCCCTGGCAACCATCACCACGGACCCTGCGACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | TCCAAGAGGTGGGCTGCGCTCCGGGGACTGACCGGCTaGAGAATGCAGGATGCCCTTAGCCTTCTGGTCCTT | + |
Preference number: 6 (lower is better) Translates to: SKRWAALRGLTG*RMQDALSLLVL Trigger: AAGGACCAGAAGGCTAAGGGCATCCTGCATTCTCCAGCCGGTCAGTCCCCGGAGCGCAGCCCACCTCTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 72 bp | GAGTTCAGCTCCTTTGTGGGCTGGGGCTCGGAGAGGTaGAGAGCTCTGGATGGAGCAGGCAGAACTTGGGTA | + |
Preference number: 6 (lower is better) Translates to: EFSSFVGWGSER*RALDGAGRTWV Trigger: TACCCAAGTTCTGCCTGCTCCATCCAGAGCTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CAA 90 bp | CCTCCACCCTGGCTATTCCCAGTGCCAGGTCTCATACAGCTACCATaGAGTTCAGCTCCTTTGTGGGCTGGGGCTCGGAGAGGTGCAGAG | + |
Preference number: 6 (lower is better) Translates to: PPPWLFPVPGLIQLP*SSAPLWAGARRGAE Trigger: CTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAGACCTGGCACTGGGAATAGCCAGGGTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CAA 90 bp | TTCCCAGTGCCAGGTCTCATACAGCTACCATTGAGTTCAGCTCCTTaGTGGGCTGGGGCTCGGAGAGGTGCAGAGCTCTGGATGGAGCAG | + |
Preference number: 6 (lower is better) Translates to: FPVPGLIQLPLSSAP*WAGARRGAELWMEQ Trigger: CTGCTCCATCCAGAGCTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAGACCTGGCACTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CAA 72 bp | CCAGGTCTCATACAGCTACCATTGAGTTCAGCTCCTTaGTGGGCTGGGGCTCGGAGAGGTGCAGAGCTCTGG | + |
Preference number: 6 (lower is better) Translates to: PGLIQLPLSSAP*WAGARRGAELW Trigger: CCAGAGCTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAGACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS TCA 72 bp | GGCTATTCCCAGTGCCAGGTCTCATACAGCTACCATTaGGTTCAGCTCCTTTGTGGGCTGGGGCTCGGAGAG | + |
Preference number: 6 (lower is better) Translates to: GYSQCQVSYSYH*VQLLCGLGLGE Trigger: CTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAGACCTGGCACTGGGAATAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 72 bp | GTCCTGGGTTCTCGTAGTATGCAGCCTTCTGCATGGTaGACTCAGGAAGTTCCAGGGTCAGCTGACCCTGCT | + |
Preference number: 6 (lower is better) Translates to: VLGSRSMQPSAW*TQEVPGSADPA Trigger: AGCAGGGTCAGCTGACCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CCA 72 bp | CATACAGCTACCATTGAGTTCAGCTCCTTTGTGGGCTaGGGCTCGGAGAGGTGCAGAGCTCTGGATGGAGCA | + |
Preference number: 6 (lower is better) Translates to: HTATIEFSSFVG*GSERCRALDGA Trigger: TGCTCCATCCAGAGCTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | GGTCTCATACAGCTACCATTGAGTTCAGCTCCTTTGTaGGCTGGGGCTCGGAGAGGTGCAGAGCTCTGGATG | + |
Preference number: 6 (lower is better) Translates to: GLIQLPLSSAPL*AGARRGAELWM Trigger: CATCCAGAGCTCTGCACCTCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | AGAGTCCTGGGTTCTCGTAGTATGCAGCCTTCTGCATaGTGCACTCAGGAAGTTCCAGGGTCAGCTGACCCT | + |
Preference number: 6 (lower is better) Translates to: RVLGSRSMQPSA*CTQEVPGSADP Trigger: AGGGTCAGCTGACCCTGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CCA 72 bp | GTAATCACTGTCCAGGGAGTTGGCAGCAGCAGGGGGTaGGTAAGGCTGATGAGGAGTGCTGTAGCCATATGT | + |
Preference number: 6 (lower is better) Translates to: VITVQGVGSSRG*VRLMRSAVAIC Trigger: ACATATGGCTACAGCACTCCTCATCAGCCTTACCCACCCCCTGCTGCTGCCAACTCCCTGGACAGTGATTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CAA 72 bp | TGGCTATTCCCAGTGCCAGGTCTCATACAGCTACCATaGAGTTCAGCTCCTTTGTGGGCTGGGGCTCGGAGA | + |
Preference number: 6 (lower is better) Translates to: WLFPVPGLIQLP*SSAPLWAGARR Trigger: TCTCCGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGTAGCTGTATGAGACCTGGCACTGGGAATAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CAA 90 bp | ATGGTGGATGAAGAGCTAGAAGCACTGAGTCCACCCTTGGTCTTCTaGGCAGGCACTCCACTTCCAGGATTGGTAGGTGAAGATGGGGGC | + |
Preference number: 6 (lower is better) Translates to: MVDEELEALSPPLVF*AGTPLPGLVGEDGG Trigger: GCCCCCATCTTCACCTACCAATCCTGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTGGACTCAGTGCTTCTAGCTCTTCATCCACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS GCA 72 bp | TCCGTAGCCTCCAAAGAGTCCTGGGTTCTCGTAGTATaGAGCCTTCTGCATGGTGCACTCAGGAAGTTCCAG | + |
Preference number: 6 (lower is better) Translates to: SVASKESWVLVV*SLLHGALRKFQ Trigger: CTGGAACTTCCTGAGTGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGACTCTTTGGAGGCTACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS GCA 72 bp | TGGCAGCAGCAGGGGGTGGGTAAGGCTGATGAGGAGTaGTGTAGCCATATGTGTCAGTGGCTTTGCTATATC | + |
Preference number: 6 (lower is better) Translates to: WQQQGVGKADEE*CSHMCQWLCYI Trigger: GATATAGCAAAGCCACTGACACATATGGCTACAGCACTCCTCATCAGCCTTACCCACCCCCTGCTGCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CAA 72 bp | GAAGAGCTAGAAGCACTGAGTCCACCCTTGGTCTTCTaGGCAGGCACTCCACTTCCAGGATTGGTAGGTGAA | + |
Preference number: 6 (lower is better) Translates to: EELEALSPPLVF*AGTPLPGLVGE Trigger: TTCACCTACCAATCCTGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTGGACTCAGTGCTTCTAGCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CAA 90 bp | TGTTTGCTGATGGTGGATGAAGAGCTAGAAGCACTGAGTCCACCCTaGGTCTTCTTGGCAGGCACTCCACTTCCAGGATTGGTAGGTGAA | + |
Preference number: 6 (lower is better) Translates to: CLLMVDEELEALSPP*VFLAGTPLPGLVGE Trigger: TTCACCTACCAATCCTGGAAGTGGAGTGCCTGCCAAGAAGACCAAGGGTGGACTCAGTGCTTCTAGCTCTTCATCCACCATCAGCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 |
||
CDS CCA 72 bp | AGTGGCTTTGCTATATCCGTAGCCTCCAAAGAGTCCTaGGTTCTCGTAGTATGCAGCCTTCTGCATGGTGCA | + |
Preference number: 6 (lower is better) Translates to: SGFAISVASKES*VLVVCSLLHGA Trigger: TGCACCATGCAGAAGGCTGCATACTACGAGAACCCAGGACTCTTTGGAGGCTACGGATATAGCAAAGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS GCA 72 bp | GATGAGGAGTGCTGTAGCCATATGTGTCAGTGGCTTTaGTATATCCGTAGCCTCCAAAGAGTCCTGGGTTCT | + |
Preference number: 6 (lower is better) Translates to: DEECCSHMCQWL*YIRSLQRVLGS Trigger: AGAACCCAGGACTCTTTGGAGGCTACGGATATAGCAAAGCCACTGACACATATGGCTACAGCACTCCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |
||
CDS CCA 72 bp | AAGGCTGATGAGGAGTGCTGTAGCCATATGTGTCAGTaGCTTTGCTATATCCGTAGCCTCCAAAGAGTCCTG | + |
Preference number: 6 (lower is better) Translates to: KADEECCSHMCQ*LCYIRSLQRVL Trigger: CAGGACTCTTTGGAGGCTACGGATATAGCAAAGCCACTGACACATATGGCTACAGCACTCCTCATCAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047830.8 ENSMUST00000111982.8 ENSMUST00000111983.9 ENSMUST00000144544.3 |