Pregenerated sensors for HOXD10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050368Ensembl transcript IDs: ENSMUST00000061745.5
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAAGGGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTaGAACTCGGTGCCCCCTCTCGGATCCTGGCCTCACATGGGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: MKGLFPPCQSSSTQA*NSVPPLGSWPHMGL Trigger: GAGGCCCATGTGAGGCCAGGATCCGAGAGGGGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCCTTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR GCA 90 bp | ATTGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTaGGCTTGTACTTCTACCAAACCACAGATGCACCACAAGGAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: IALHMRPEHAQKSTG*ACTSTKPQMHHKER Trigger: CCTTTCCTTGTGGTGCATCTGTGGTTTGGTAGAAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR CCA 90 bp | TTAGGAAAAACATGGAAAAGTCACATTGCTGGCGGGATAGATGGGTaGGATGCGATGGATACGTTTAGATGGATGTTCTACAGTTCCAAT | + |
|
Preference number: 1 (lower is better) Translates to: LGKTWKSHIAGGIDG*DAMDTFRWMFYSSN Trigger: ATTGGAACTGTAGAACATCCATCTAAACGTATCCATCGCATCCCACCCATCTATCCCGCCAGCAATGTGACTTTTCCATGTTTTTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR TCA 90 bp | ATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATaGCCCCAAAGTCACATTCTAGCAGGAAAACAGAACAGAACAGAA | + |
|
Preference number: 1 (lower is better) Translates to: MYTHRDYRSLAARTE*PQSHILAGKQNRTE Trigger: TTCTGTTCTGTTCTGTTTTCCTGCTAGAATGTGACTTTGGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR CCA 90 bp | CATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTTTCCAGCACTCAGGCCTaGAACTCGGTGCCCCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HYTCDQNMHRKAQVALVLSSTQA*NSVPPL Trigger: GAGAGGGGGCACCGAGTTCCAGGCCTGAGTGCTGGA...AAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR CAA 90 bp | ATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTaGTACTTCTACCAAACCACAGATGCACCACAAGGAAAGGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: ITHATRTCTEKHRLR*YFYQTTDAPQGKAT Trigger: TGTAGCCTTTCCTTGTGGTGCATCTGTGGTTTGGTAGAAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAAAAACATGGAAAAGTCACATTGCTGGCGGGATAGATGGGTGGGATGCGATGAAAACCAAAGAGCAATaGAGGGTTTGTTTCCGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GKTWKSHIAGGIDGWDAMKTKEQ*RVCFRL Trigger: AAGGCGGAAACAAACCCTTCATTGCTCTTTGGTTTT...CATCGCATCCCACCCATCTATCCCGCCAGCAATGTGACTTTTCCATGTTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR CAA 90 bp | TATTGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTaGCGCTTGTACTTCTACCAAACCACAGATGCACCACAAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YCITHATRTCTEKHR*RLYFYQTTDAPQGK Trigger: CTTTCCTTGTGGTGCATCTGTGGTTTGGTAGAAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR TCA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACGTTTTCAAAATGCCATaGGTTCATGGGCTAACCACA | + |
|
Preference number: 2 (lower is better) Translates to: CITHATRTCTEKHRLRLYVFKMP*VHGLTT Trigger: TGTGGTTAGCCCATGAACTCATGGCATTTTGAAAAC...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR TCA 90 bp | ACCACAGATGCACCACAAGGAAAGGCTACAAGGCATAAGTCATCAATATTCCATGCAGCACGAACAGAATaGCCCCAAAGTCACATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TTDAPQGKATRHKSSIFHAARTE*PQSHIL Trigger: TAGAATGTGACTTTGGGGTCATTCTGTTCGTGCTGC...ATGGAATATTGATGACTTATGCCTTGTAGCCTTTCCTTGTGGTGCATCTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR CCA 90 bp | CCCATTTCCAGAGTTTATTGCATTACACATGCGACCAGAACATGCACAGAAAAGAATGCCATGAGTTCATaGGCTAACCACACACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PISRVYCITHATRTCTEKNAMSS*ANHTQR Trigger: TCTCTGTGTGTGGTTAGCCCATGAACTCATGGCATT...CTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAATAAACTCTGGAAATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGTTCATGGGCTAACCACACACAGAGAACTTTTATGTTAGGAAAAACATGGATGGATACGTTTAGATaGATGTTCTACAGTTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: MSSWANHTQRTFMLGKTWMDTFR*MFYSSN Trigger: ATTGGAACTGTAGAACATCCATCTAAACGTATCCAT...CCATGTTTTTCCTAACATAAAAGTTCTCTGTGTGTGGTTAGCCCATGAACTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR GCA 72 bp | CTTGCCAGTCCTCCAGCACTCAGGCCTGGAACTCGGTaGCCCCTCTCGGATCCTGGCCTCACATGGGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LASPPALRPGTR*PLSDPGLTWAS Trigger: TGAGGCCCATGTGAGGCCAGGATCCGAGAGGGGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR CCA 72 bp | TTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTaGAACTCGGTGCCCCCTCTCGGATCCTGGCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LFPPCQSSSTQA*NSVPPLGSWPH Trigger: GTGAGGCCAGGATCCGAGAGGGGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCACAGATGCACCACAAGGAAAGGCTACAAGGCATAAGTCATCAATATTCCATGGGTTTGTTTCCGCCTaGCCAGTCCTCCAGCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: TTDAPQGKATRHKSSIFHGFVSA*PVLQHS Trigger: TGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCC...ATGGAATATTGATGACTTATGCCTTGTAGCCTTTCCTTGTGGTGCATCTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGTTCATGGGCTAACCACACACAGAGAACTTTTATGTTAGGAAAAACATGGAGAGCAATGAAGGGTTaGTTTCCGCCTTGCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: MSSWANHTQRTFMLGKTWRAMKG*FPPCQS Trigger: GGACTGGCAAGGCGGAAACAAACCCTTCATTGCTCT...CCATGTTTTTCCTAACATAAAAGTTCTCTGTGTGTGGTTAGCCCATGAACTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCACAGATGCACCACAAGGAAAGGCTACAAGGCATAAGTCATCAATATTCCATGGGATTACAGATCACTaGCAGCACGAACAGAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: TTDAPQGKATRHKSSIFHGITDH*QHEQND Trigger: GTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCC...ATGGAATATTGATGACTTATGCCTTGTAGCCTTTCCTTGTGGTGCATCTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR CCA 72 bp | GGGATAGATGGGTGGGATGCGATGGATACGTTTAGATaGATGTTCTACAGTTCCAATAAGTTAAGACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GIDGWDAMDTFR*MFYSSNKLRPK Trigger: TTTGGGTCTTAACTTATTGGAACTGTAGAACATCCATCTAAACGTATCCATCGCATCCCACCCATCTATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR TCA 72 bp | TGGATGTTCTACAGTTCCAATAAGTTAAGACCCAAATaGAAATGCGCAGTAATAGTTACCCTGCATTACGAT | + |
|
Preference number: 3 (lower is better) Translates to: WMFYSSNKLRPK*KCAVIVTLHYD Trigger: ATCGTAATGCAGGGTAACTATTACTGCGCATTTTCATTTGGGTCTTAACTTATTGGAACTGTAGAACATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTGGAACTCGGTGCCCCCACGAGGGTTGAGCTaGAGCATGACAGTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFPPCQSSSTQAWNSVPPRGLS*SMTVEL Trigger: CAGCTCCACTGTCATGCTCCAGCTCAACCCTCGTGG...GGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTGGAACTCGGTGCCCCCTGCACTTCGGGACTaGACACGGAAACCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFPPCQSSSTQAWNSVPPALRD*TRKPQP Trigger: TGGCTGAGGTTTCCGTGTCCAGTCCCGAAGTGCAGG...GGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | AACCAAAGAGCAATGAAGGGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGTGGGCAGCCGAGAGCTaGGGCTTGGCCGCGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: NQRAMKGLFPPCQSSSTQWAAES*GLAAPR Trigger: TCGTGGCGCGGCCAAGCCGCAGCTCTCGGCTGCCCA...CTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCCTTCATTGCTCTTTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTGGAACTCGGTGCCCCTTGGGTTTTCCCGGTaGCGTAGGTCTGACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLFPPCQSSSTQAWNSVPLGFSR*RRSDSV Trigger: GACTGAGTCAGACCTACGCCACCGGGAAAACCCAAG...GGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTGGAACTCGGTGCCCTGCCACTCTTTGCAGTaGGCCAATTGCTGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLFPPCQSSSTQAWNSVPCHSLQ*ANCWLE Trigger: CTCCAACCAGCAATTGGCTCACTGCAAAGAGTGGCA...GGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTGGAACTCGGGTTCACTTCTCTTTTaGCCAAAGACGGGAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MKGLFPPCQSSSTQAWNSGSLLF*PKTGAV Trigger: GACTGCTCCCGTCTTTGGCCAAAAGAGAAGTGAACC...CGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACGTCTGCGCTAGGTGGTaGCATGTACATGCTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CITHATRTCTEKHRLRLYVCARW*HVHAGA Trigger: AGCGCCAGCATGTACATGCCACCACCTAGCGCAGAC...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACCATGTCTGCGCTAGGTaGTGGCATGTACATGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CITHATRTCTEKHRLRLYHVCAR*WHVHAG Trigger: GCCAGCATGTACATGCCACCACCTAGCGCAGACATG...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | ATATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATGACCCCTCGGGGACCAGCCTCTaGTACGAAGGGACCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICILIGITDHLQHEQNDPSGTSL*YEGTSA Trigger: TGCCGAGGTCCCTTCGTACCAGAGGCTGGTCCCCGA...GGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | CCCATTTCCAGAGTTTATTGCATTACACATGCGACCAGAACATGCACAGAAAAGCTGGAAGGCCGCCTTTaGCCTCGGGGCTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PISRVYCITHATRTCTEKLEGRL*PRGSPL Trigger: AAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAG...CTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAATAAACTCTGGAAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACATAGGTCCCCATGTCTaGGCTAGGTGGTGGCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CITHATRTCTEKHRLRLYIGPHV*ARWWHV Trigger: TACATGCCACCACCTAGCGCAGACATGGGGACCTAT...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | AACCAAAGAGCAATGAAGGGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGTGGCATGTACATGCTaGCGCTGCTCGAATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NQRAMKGLFPPCQSSSTQVACTC*RCSNKN Trigger: GTTTTTATTCGAGCAGCGCCAGCATGTACATGCCAC...CTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCCTTCATTGCTCTTTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | ATATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATGACCCCGCAGCTCCTGTCTTCTaGAAGGCCGCCTTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ICILIGITDHLQHEQNDPAAPVF*KAAFGL Trigger: GAGGCCAAAGGCGGCCTTCCAGAAGACAGGAGCTGC...GGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR TCA 90 bp | CAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTTCTACCAAACCACAGAAATGTTGGCGGTGAATaGGCAAGTGGGGACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNMHRKAQVALVLLPNHRNVGGE*ASGDLL Trigger: CAGCAAGTCCCCACTTGCTCATTCACCGCCAACATT...TCTGTGGTTTGGTAGAAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| 3UTR CAA 72 bp | ACACATGCGACCAGAACATGCACAGAAAAGCACAGGTaGCGCTTGTACTTCTACCAAACCACAGATGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: THATRTCTEKHR*RLYFYQTTDAP Trigger: TGGTGCATCTGTGGTTTGGTAGAAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR TCA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACCTCGGCTCATCTTCTTaGGTTTCATTCGGCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CITHATRTCTEKHRLRLYLGSSS*VSFGGF Trigger: AAAACCGCCGAATGAAACTCAAGAAGATGAGCCGAG...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACCTTTCTGCCACTCTTTaGAGTGAGCCAATTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CITHATRTCTEKHRLRLYLSATL*SEPIAG Trigger: ACCAGCAATTGGCTCACTGCAAAGAGTGGCAGAAAG...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTGTACATGCTGGCGCTaGTCGAATAAAAACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CITHATRTCTEKHRLRLYCTCWR*SNKNCH Trigger: GTGACAGTTTTTATTCGAGCAGCGCCAGCATGTACA...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | CCCATTTCCAGAGTTTATTGCATTACACATGCGACCAGAACATGCACAGAAAAGATCTTCTTTTCCATCTaGAGCTGGGCAGCCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PISRVYCITHATRTCTEKIFFSI*SWAAES Trigger: GCTCTCGGCTGCCCAGCTGCAGATGGAAAAGAAGAT...CTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAATAAACTCTGGAAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATGCACCACAAGGAAAGGCTACAAGGCATAAGTCATCAATATTCCATGGACCTCGGCAGAAATaGGTTTGTTGCGCTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTDAPQGKATRHKSSIFHGPRQK*VCCAYQ Trigger: CTGATAAGCGCAACAAACTCATTTCTGCCGAGGTCC...ATGGAATATTGATGACTTATGCCTTGTAGCCTTTCCTTGTGGTGCATCTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | CCCATTTCCAGAGTTTATTGCATTACACATGCGACCAGAACATGCACAGAAAAGGTGGTGGCATGTACATaGTGGCGCTGCTCGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PISRVYCITHATRTCTEKVVACT*WRCSNK Trigger: TTTATTCGAGCAGCGCCAGCATGTACATGCCACCAC...CTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAATAAACTCTGGAAATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | ATATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATGACCCCGAGCAAGTGGGGACTTaGTGTGTAACAGGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICILIGITDHLQHEQNDPEQVGT*CVTGCS Trigger: AGAGCAACCTGTTACACAGCAAGTCCCCACTTGCTC...GGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | CAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTTCTACCAAACCACAGAATACCCATATTTTGGTaGTTCACTTCTCTTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNMHRKAQVALVLLPNHRIPIFW*FTSLLA Trigger: GGCCAAAAGAGAAGTGAACCACCAAAATATGGGTAT...TCTGTGGTTTGGTAGAAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | ACCACAGATGCACCACAAGGAAAGGCTACAAGGCATAAGTCATCAATATTCCATTGCTGTGTAACAGGTTaGTCTATTCGACAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTDAPQGKATRHKSSIFHCCVTG*SIRQDL Trigger: CAGATCTTGTCGAATAGAGCAACCTGTTACACAGCA...ATGGAATATTGATGACTTATGCCTTGTAGCCTTTCCTTGTGGTGCATCTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | ACCACAGATGCACCACAAGGAAAGGCTACAAGGCATAAGTCATCAATATTCCATGAGCCAATTGCTGGTTaGAGTATCAGACTTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTDAPQGKATRHKSSIFHEPIAG*SIRLDF Trigger: GAAATCAAGTCTGATACTCCAACCAGCAATTGGCTC...ATGGAATATTGATGACTTATGCCTTGTAGCCTTTCCTTGTGGTGCATCTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR GCA 90 bp | CATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTTGCTTATCAGAATACATaGAGCAATTGGATTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HYTCDQNMHRKAQVALVLAYQNT*SNWILL Trigger: AAGAAGAATCCAATTGCTGCATGTATTCTGATAAGC...AAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR TCA 90 bp | ATGAGTTCATGGGCTAACCACACACAGAGAACTTTTATGTTAGGAAAAACATGGTTGGAGTATCAGACTTaGTTTCCTCTTTGCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSSWANHTQRTFMLGKTWLEYQT*FPLCFP Trigger: AGGAAAGCAAAGAGGAAATCAAGTCTGATACTCCAA...CCATGTTTTTCCTAACATAAAAGTTCTCTGTGTGTGGTTAGCCCATGAACTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CCA 90 bp | ATATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATGACCCCTTCATACCCATATTTTaGTGGTTCACTTCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICILIGITDHLQHEQNDPFIPIF*WFTSLL Trigger: CAAAAGAGAAGTGAACCACCAAAATATGGGTATGAA...GGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 90 bp | GTGGGCTCCTGGCCGCTCGCGCTTTCGTTCATCTTCTTTTCCATCTaGAGCTGGGCAGCCGAGAGCTGCGGCTTGGCCGCGCCACGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGSWPLALSFIFFSI*SWAAESCGLAAPRG Trigger: CCCTCGTGGCGCGGCCAAGCCGCAGCTCTCGGCTGCCCAGCTGCAGATGGAAAAGAAGATGAACGAAAGCGCGAGCGGCCAGGAGCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | TGGGCAGCCGAGAGCTGCGGCTTGGCCGCGCCACGAGGGTTGAGCTaGAGCATGACAGTGGAGCTGCCTTCGGGGCTGTTATTGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: WAAESCGLAAPRGLS*SMTVELPSGLLLYS Trigger: AGAGTACAATAACAGCCCCGAAGGCAGCTCCACTGTCATGCTCCAGCTCAACCCTCGTGGCGCGGCCAAGCCGCAGCTCTCGGCTGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | CTCCTGTCTTCTGGAAGGCCGCCTTTGGCCTCGGGGCTCTCCACTTaGGAGACTTTAGTGGGCTCCTGGCCGCTCGCGCTTTCGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSGRPPLASGLST*ETLVGSWPLALSFI Trigger: GATGAACGAAAGCGCGAGCGGCCAGGAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGAAGACAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | TTCGGGACTGGACACGGAAACCTCAGCCAGGCAGCTCCTGTCTTCTaGAAGGCCGCCTTTGGCCTCGGGGCTCTCCACTTGGGAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FGTGHGNLSQAAPVF*KAAFGLGALHLGDF Trigger: AAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGAAGACAGGAGCTGCCTGGCTGAGGTTTCCGTGTCCAGTCCCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | AACCAAAGAGCAATGAAGGGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCGAGAGCTGCGGCTaGGCCGCGCCACGAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NQRAMKGLFPPCQSSSTQAESCG*AAPRGL Trigger: CAACCCTCGTGGCGCGGCCAAGCCGCAGCTCTCGGC...CTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCCTTCATTGCTCTTTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 90 bp | CTTTCGTTCATCTTCTTTTCCATCTGCAGCTGGGCAGCCGAGAGCTaGGGCTTGGCCGCGCCACGAGGGTTGAGCTGGAGCATGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSFIFFSICSWAAES*GLAAPRGLSWSMTV Trigger: CACTGTCATGCTCCAGCTCAACCCTCGTGGCGCGGCCAAGCCGCAGCTCTCGGCTGCCCAGCTGCAGATGGAAAAGAAGATGAACGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | CCTTTGGCCTCGGGGCTCTCCACTTGGGAGACTTTAGTGGGCTCCTaGCCGCTCGCGCTTTCGTTCATCTTCTTTTCCATCTGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLASGLSTWETLVGS*PLALSFIFFSICSW Trigger: CCAGCTGCAGATGGAAAAGAAGATGAACGAAAGCGCGAGCGGCCAGGAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | AACCAAAGAGCAATGAAGGGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCGCGCCACGAGGGTaGAGCTGGAGCATGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NQRAMKGLFPPCQSSSTQAAPRG*SWSMTV Trigger: CACTGTCATGCTCCAGCTCAACCCTCGTGGCGCGGC...CTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCCTTCATTGCTCTTTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | GGAACCTCGGGGTTCTCAACAGGACAAGACTCGGGGACCAGCCTCTaGTACGAAGGGACCTCGGCAGAAATGAGTTTGTTGCGCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: GTSGFSTGQDSGTSL*YEGTSAEMSLLRLS Trigger: TGATAAGCGCAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAGGCTGGTCCCCGAGTCTTGTCCTGTTGAGAACCCCGAGGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | AACCAAAGAGCAATGAAGGGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGCTCGGGGCTCTCCACTaGGGAGACTTTAGTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NQRAMKGLFPPCQSSSTQLGALH*GDFSGL Trigger: GAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGAG...CTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACCCTTCATTGCTCTTTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 90 bp | AGACGGGAGCAGTCCACAGGTTTGCATTCCATAGGTCCCCATGTCTaGGCTAGGTGGTGGCATGTACATGCTGGCGCTGCTCGAATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RREQSTGLHSIGPHV*ARWWHVHAGAARIK Trigger: TTTTATTCGAGCAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGGGGACCTATGGAATGCAAACCTGTGGACTGCTCCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTCCGCCTTGCCAGTCCTCCAGCACTCAGGCCTGGAACTCGGTGCCCGTTGGAGTATCAGACTaGATTTCCTCTTTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLFPPCQSSSTQAWNSVPVGVSD*ISSLLS Trigger: GGAAAGCAAAGAGGAAATCAAGTCTGATACTCCAAC...GGGCACCGAGTTCCAGGCCTGAGTGCTGGAGGACTGGCAAGGCGGAAACAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | TCCACAGGTTTGCATTCCATAGGTCCCCATGTCTGCGCTAGGTGGTaGCATGTACATGCTGGCGCTGCTCGAATAAAAACTGTCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STGLHSIGPHVCARW*HVHAGAARIKTVTP Trigger: AGGAGTGACAGTTTTTATTCGAGCAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGGGGACCTATGGAATGCAAACCTGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | CAGTCCACAGGTTTGCATTCCATAGGTCCCCATGTCTGCGCTAGGTaGTGGCATGTACATGCTGGCGCTGCTCGAATAAAAACTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QSTGLHSIGPHVCAR*WHVHAGAARIKTVT Trigger: AGTGACAGTTTTTATTCGAGCAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGGGGACCTATGGAATGCAAACCTGTGGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | ATATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATGACCCCTCTGGAAGGCCGCCTTaGGCCTCGGGGCTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ICILIGITDHLQHEQNDPSGRPP*ASGLST Trigger: AGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGA...GGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | TGCATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACCCTTCGGGGCTGTTATaGTACTCTTGGGTTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CITHATRTCTEKHRLRLYPSGLL*YSWVFP Trigger: CGGGAAAACCCAAGAGTACAATAACAGCCCCGAAGG...GTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS TCA 90 bp | AAGACTCGGGGACCAGCCTCTGGTACGAAGGGACCTCGGCAGAAATaGGTTTGTTGCGCTTATCAGAATACATGCAGCAATTGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTRGPASGTKGPRQK*VCCAYQNTCSNWIL Trigger: AAGAATCCAATTGCTGCATGTATTCTGATAAGCGCAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAGGCTGGTCCCCGAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 90 bp | ATGTTGGCGGTGAATGAGCAAGTGGGGACTTGCTGTGTAACAGGTTaGTCTATTCGACAAGATCTGTTCGGGTCTGTCCAACTGTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: MLAVNEQVGTCCVTG*SIRQDLFGSVQLST Trigger: AGTAGACAGTTGGACAGACCCGAACAGATCTTGTCGAATAGAGCAACCTGTTACACAGCAAGTCCCCACTTGCTCATTCACCGCCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | GGAAAAACATGGAAAAGTCACATTGCTGGCGGGATAGATGGGTGGGATGCGATGGACTTGATTTCCTCTTaGCTTTCCTTCTCCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GKTWKSHIAGGIDGWDAMDLISS*LSFSCT Trigger: AGTGCAGGAGAAGGAAAGCAAAGAGGAAATCAAGTC...CATCGCATCCCACCCATCTATCCCGCCAGCAATGTGACTTTTCCATGTTTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | ACCACAGATGCACCACAAGGAAAGGCTACAAGGCATAAGTCATCAATATTCCATGAGCAGTCCACAGGTTaGCATTCCATAGGTCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TTDAPQGKATRHKSSIFHEQSTG*HSIGPH Trigger: ATGGGGACCTATGGAATGCAAACCTGTGGACTGCTC...ATGGAATATTGATGACTTATGCCTTGTAGCCTTTCCTTGTGGTGCATCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 90 bp | TTGGATTCTTCTTTAATGTTGGCGGTGAATGAGCAAGTGGGGACTTaGTGTGTAACAGGTTGCTCTATTCGACAAGATCTGTTCGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDSSLMLAVNEQVGT*CVTGCSIRQDLFGS Trigger: AGACCCGAACAGATCTTGTCGAATAGAGCAACCTGTTACACAGCAAGTCCCCACTTGCTCATTCACCGCCAACATTAAAGAAGAATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 90 bp | AAGGATGTACATTCATACCCATATTTTGGTGGTTCACTTCTCTTTTaGCCAAAGACGGGAGCAGTCCACAGGTTTGCATTCCATAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KDVHSYPYFGGSLLF*PKTGAVHRFAFHRS Trigger: GGACCTATGGAATGCAAACCTGTGGACTGCTCCCGTCTTTGGCCAAAAGAGAAGTGAACCACCAAAATATGGGTATGAATGTACATCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | ATATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATGACCCCTGGTTCACTTCTCTTTaGGCCAAAGACGGGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICILIGITDHLQHEQNDPWFTSL*AKDGSS Trigger: ACTGCTCCCGTCTTTGGCCAAAAGAGAAGTGAACCA...GGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | ATATGTATACTCATAGGGATTACAGATCACTTGCAGCACGAACAGAATGACCCCGCTGTTATTGTACTCTaGGGTTTTCCCGGTGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: ICILIGITDHLQHEQNDPAVIVL*GFPGGV Trigger: TACGCCACCGGGAAAACCCAAGAGTACAATAACAGC...GGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTATGAGTATACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | CAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTTCTACCAAACCACAGAGATTCTTCTTTAATGTaGGCGGTGAATGAGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QNMHRKAQVALVLLPNHRDSSLM*AVNEQV Trigger: CACTTGCTCATTCACCGCCAACATTAAAGAAGAATC...TCTGTGGTTTGGTAGAAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | CATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTTTCGGCAGAAATGAGTTaGTTGCGCTTATCAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: HYTCDQNMHRKAQVALVLSAEMS*LRLSEY Trigger: GTATTCTGATAAGCGCAACAAACTCATTTCTGCCGA...AAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS TCA 90 bp | AGAATACATGCAGCAATTGGATTCTTCTTTAATGTTGGCGGTGAATaGGCAAGTGGGGACTTGCTGTGTAACAGGTTGCTCTATTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RIHAAIGFFFNVGGE*ASGDLLCNRLLYST Trigger: TGTCGAATAGAGCAACCTGTTACACAGCAAGTCCCCACTTGCTCATTCACCGCCAACATTAAAGAAGAATCCAATTGCTGCATGTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | CATTACACATGCGACCAGAACATGCACAGAAAAGCACAGGTTGCGCTTGTACTTGCAGAAATGAGTTTGTaGCGCTTATCAGAATACATG | + |
|
Preference number: 5 (lower is better) Translates to: HYTCDQNMHRKAQVALVLAEMSL*RLSEYM Trigger: CATGTATTCTGATAAGCGCAACAAACTCATTTCTGC...AAGTACAAGCGCAACCTGTGCTTTTCTGTGCATGTTCTGGTCGCATGTGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | CCCATTTCCAGAGTTTATTGCATTACACATGCGACCAGAACATGCACAGAAAAGTTGCTGTGTAACAGGTaGCTCTATTCGACAAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PISRVYCITHATRTCTEKLLCNR*LYSTRS Trigger: AGATCTTGTCGAATAGAGCAACCTGTTACACAGCAA...CTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAATAAACTCTGGAAATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS-3UTR CAA 90 bp | CCCATTTCCAGAGTTTATTGCATTACACATGCGACCAGAACATGCACAGAAAAGTGTCCAACTGTCTACTaGAGGTATATAAGGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PISRVYCITHATRTCTEKCPTVY*RYIRMY Trigger: GTACATCCTTATATACCTCAAGTAGACAGTTGGACA...CTTTTCTGTGCATGTTCTGGTCGCATGTGTAATGCAATAAACTCTGGAAATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | TGCAGCTGGGCAGCCGAGAGCTGCGGCTTGGCCGCGCCACGAGGGTaGAGCTGGAGCATGACAGTGGAGCTGCCTTCGGGGCTGTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: CSWAAESCGLAAPRG*SWSMTVELPSGLLL Trigger: CAATAACAGCCCCGAAGGCAGCTCCACTGTCATGCTCCAGCTCAACCCTCGTGGCGCGGCCAAGCCGCAGCTCTCGGCTGCCCAGCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | GAGAGCTGCGGCTTGGCCGCGCCACGAGGGTTGAGCTaGAGCATGACAGTGGAGCTGCCTTCGGGGCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ESCGLAAPRGLS*SMTVELPSGLL Trigger: TAACAGCCCCGAAGGCAGCTCCACTGTCATGCTCCAGCTCAACCCTCGTGGCGCGGCCAAGCCGCAGCTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | TCTGGAAGGCCGCCTTTGGCCTCGGGGCTCTCCACTTaGGAGACTTTAGTGGGCTCCTGGCCGCTCGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGRPPLASGLST*ETLVGSWPLAL Trigger: AAGCGCGAGCGGCCAGGAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | TTCTGGAAGGCCGCCTTTGGCCTCGGGGCTCTCCACTaGGGAGACTTTAGTGGGCTCCTGGCCGCTCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: FWKAAFGLGALH*GDFSGLLAARA Trigger: AGCGCGAGCGGCCAGGAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 72 bp | TGGCCGCTCGCGCTTTCGTTCATCTTCTTTTCCATCTaGAGCTGGGCAGCCGAGAGCTGCGGCTTGGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: WPLALSFIFFSI*SWAAESCGLAA Trigger: CGCGGCCAAGCCGCAGCTCTCGGCTGCCCAGCTGCAGATGGAAAAGAAGATGAACGAAAGCGCGAGCGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | GCTCCTGTCTTCTGGAAGGCCGCCTTTGGCCTCGGGGCTCTCCACTaGGGAGACTTTAGTGGGCTCCTGGCCGCTCGCGCTTTCGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: APVFWKAAFGLGALH*GDFSGLLAARAFVH Trigger: ATGAACGAAAGCGCGAGCGGCCAGGAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGAAGACAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | ACGGAAACCTCAGCCAGGCAGCTCCTGTCTTCTGGAAGGCCGCCTTaGGCCTCGGGGCTCTCCACTTGGGAGACTTTAGTGGGCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TETSARQLLSSGRPP*ASGLSTWETLVGSW Trigger: CCAGGAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGAAGACAGGAGCTGCCTGGCTGAGGTTTCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | TTCATCTTCTTTTCCATCTGCAGCTGGGCAGCCGAGAGCTGCGGCTaGGCCGCGCCACGAGGGTTGAGCTGGAGCATGACAGTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FIFFSICSWAAESCG*AAPRGLSWSMTVEL Trigger: CAGCTCCACTGTCATGCTCCAGCTCAACCCTCGTGGCGCGGCCAAGCCGCAGCTCTCGGCTGCCCAGCTGCAGATGGAAAAGAAGATGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | TCAGCCAGGCAGCTCCTGTCTTCTGGAAGGCCGCCTTaGGCCTCGGGGCTCTCCACTTGGGAGACTTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SARQLLSSGRPP*ASGLSTWETLV Trigger: CACTAAAGTCTCCCAAGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCAGAAGACAGGAGCTGCCTGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 72 bp | CAGTCCACAGGTTTGCATTCCATAGGTCCCCATGTCTaGGCTAGGTGGTGGCATGTACATGCTGGCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QSTGLHSIGPHV*ARWWHVHAGAA Trigger: AGCAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGGGGACCTATGGAATGCAAACCTGTGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | TCGGGGCTCTCCACTTGGGAGACTTTAGTGGGCTCCTaGCCGCTCGCGCTTTCGTTCATCTTCTTTTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SGLSTWETLVGS*PLALSFIFFSI Trigger: GATGGAAAAGAAGATGAACGAAAGCGCGAGCGGCCAGGAGCCCACTAAAGTCTCCCAAGTGGAGAGCCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | GGGTTCTCAACAGGACAAGACTCGGGGACCAGCCTCTaGTACGAAGGGACCTCGGCAGAAATGAGTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GFSTGQDSGTSL*YEGTSAEMSLL Trigger: CAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAGGCTGGTCCCCGAGTCTTGTCCTGTTGAGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | GACAGTGGAGCTGCCTTCGGGGCTGTTATTGTACTCTaGGGTTTTCCCGGTGGCGTAGGTCTGACTCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSGAAFGAVIVL*GFPGGVGLTQS Trigger: AGACTGAGTCAGACCTACGCCACCGGGAAAACCCAAGAGTACAATAACAGCCCCGAAGGCAGCTCCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | TTTCCTCTTTGCTTTCCTTCTCCTGCACTTCGGGACTaGACACGGAAACCTCAGCCAGGCAGCTCCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPLCFPSPALRD*TRKPQPGSSCL Trigger: AAGACAGGAGCTGCCTGGCTGAGGTTTCCGTGTCCAGTCCCGAAGTGCAGGAGAAGGAAAGCAAAGAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | TTCTCTTTTGGCCAAAGACGGGAGCAGTCCACAGGTTaGCATTCCATAGGTCCCCATGTCTGCGCTAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FSFGQRREQSTG*HSIGPHVCARW Trigger: CCACCTAGCGCAGACATGGGGACCTATGGAATGCAAACCTGTGGACTGCTCCCGTCTTTGGCCAAAAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | GTGGTTCACTTCTCTTTTGGCCAAAGACGGGAGCAGTCCACAGGTTaGCATTCCATAGGTCCCCATGTCTGCGCTAGGTGGTGGCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: VVHFSFGQRREQSTG*HSIGPHVCARWWHV Trigger: TACATGCCACCACCTAGCGCAGACATGGGGACCTATGGAATGCAAACCTGTGGACTGCTCCCGTCTTTGGCCAAAAGAGAAGTGAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | GGTTTGCATTCCATAGGTCCCCATGTCTGCGCTAGGTaGTGGCATGTACATGCTGGCGCTGCTCGAATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLHSIGPHVCAR*WHVHAGAARIK Trigger: TTTTATTCGAGCAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGGGGACCTATGGAATGCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | TTGCATTCCATAGGTCCCCATGTCTGCGCTAGGTGGTaGCATGTACATGCTGGCGCTGCTCGAATAAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: LHSIGPHVCARW*HVHAGAARIKT Trigger: AGTTTTTATTCGAGCAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGGGGACCTATGGAATGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS TCA 72 bp | GGACCAGCCTCTGGTACGAAGGGACCTCGGCAGAAATaGGTTTGTTGCGCTTATCAGAATACATGCAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GPASGTKGPRQK*VCCAYQNTCSN Trigger: ATTGCTGCATGTATTCTGATAAGCGCAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAGGCTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS GCA 72 bp | GTGAATGAGCAAGTGGGGACTTGCTGTGTAACAGGTTaGTCTATTCGACAAGATCTGTTCGGGTCTGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VNEQVGTCCVTG*SIRQDLFGSVQ Trigger: TTGGACAGACCCGAACAGATCTTGTCGAATAGAGCAACCTGTTACACAGCAAGTCCCCACTTGCTCATTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | TCGGGGACCAGCCTCTGGTACGAAGGGACCTCGGCAGAAATGAGTTaGTTGCGCTTATCAGAATACATGCAGCAATTGGATTCTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SGTSLWYEGTSAEMS*LRLSEYMQQLDSSL Trigger: TAAAGAAGAATCCAATTGCTGCATGTATTCTGATAAGCGCAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAGGCTGGTCCCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | GGGACCAGCCTCTGGTACGAAGGGACCTCGGCAGAAATGAGTTTGTaGCGCTTATCAGAATACATGCAGCAATTGGATTCTTCTTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: GTSLWYEGTSAEMSL*RLSEYMQQLDSSLM Trigger: CATTAAAGAAGAATCCAATTGCTGCATGTATTCTGATAAGCGCAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAGGCTGGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS TCA 72 bp | GCAGCAATTGGATTCTTCTTTAATGTTGGCGGTGAATaGGCAAGTGGGGACTTGCTGTGTAACAGGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAIGFFFNVGGE*ASGDLLCNRLL Trigger: GAGCAACCTGTTACACAGCAAGTCCCCACTTGCTCATTCACCGCCAACATTAAAGAAGAATCCAATTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | AGCCTCTGGTACGAAGGGACCTCGGCAGAAATGAGTTaGTTGCGCTTATCAGAATACATGCAGCAATTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLWYEGTSAEMS*LRLSEYMQQLD Trigger: ATCCAATTGCTGCATGTATTCTGATAAGCGCAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CCA 72 bp | CATTCATACCCATATTTTGGTGGTTCACTTCTCTTTTaGCCAAAGACGGGAGCAGTCCACAGGTTTGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: HSYPYFGGSLLF*PKTGAVHRFAF Trigger: GAATGCAAACCTGTGGACTGCTCCCGTCTTTGGCCAAAAGAGAAGTGAACCACCAAAATATGGGTATGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | CTCTGGTACGAAGGGACCTCGGCAGAAATGAGTTTGTaGCGCTTATCAGAATACATGCAGCAATTGGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LWYEGTSAEMSL*RLSEYMQQLDS Trigger: AGAATCCAATTGCTGCATGTATTCTGATAAGCGCAACAAACTCATTTCTGCCGAGGTCCCTTCGTACCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | TTGCGCTTATCAGAATACATGCAGCAATTGGATTCTTCTTTAATGTaGGCGGTGAATGAGCAAGTGGGGACTTGCTGTGTAACAGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRLSEYMQQLDSSLM*AVNEQVGTCCVTGC Trigger: GCAACCTGTTACACAGCAAGTCCCCACTTGCTCATTCACCGCCAACATTAAAGAAGAATCCAATTGCTGCATGTATTCTGATAAGCGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | ACATTCATACCCATATTTTGGTGGTTCACTTCTCTTTaGGCCAAAGACGGGAGCAGTCCACAGGTTTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: TFIPIFWWFTSL*AKDGSSPQVCI Trigger: AATGCAAACCTGTGGACTGCTCCCGTCTTTGGCCAAAAGAGAAGTGAACCACCAAAATATGGGTATGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | TCGGCAGAAATGAGTTTGTTGCGCTTATCAGAATACATGCAGCAATaGGATTCTTCTTTAATGTTGGCGGTGAATGAGCAAGTGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SAEMSLLRLSEYMQQ*DSSLMLAVNEQVGT Trigger: AGTCCCCACTTGCTCATTCACCGCCAACATTAAAGAAGAATCCAATTGCTGCATGTATTCTGATAAGCGCAACAAACTCATTTCTGCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | ACTGTCTACTTGAGGTATATAAGGATGTACATTCATACCCATATTTaGGTGGTTCACTTCTCTTTTGGCCAAAGACGGGAGCAGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TVYLRYIRMYIHTHI*VVHFSFGQRREQST Trigger: TGTGGACTGCTCCCGTCTTTGGCCAAAAGAGAAGTGAACCACCAAAATATGGGTATGAATGTACATCCTTATATACCTCAAGTAGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 90 bp | TTGCTCTATTCGACAAGATCTGTTCGGGTCTGTCCAACTGTCTACTaGAGGTATATAAGGATGTACATTCATACCCATATTTTGGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLYSTRSVRVCPTVY*RYIRMYIHTHILVV Trigger: AACCACCAAAATATGGGTATGAATGTACATCCTTATATACCTCAAGTAGACAGTTGGACAGACCCGAACAGATCTTGTCGAATAGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||
| CDS CAA 72 bp | TCGACAAGATCTGTTCGGGTCTGTCCAACTGTCTACTaGAGGTATATAAGGATGTACATTCATACCCATATT | + |
|
Preference number: 6 (lower is better) Translates to: STRSVRVCPTVY*RYIRMYIHTHI Trigger: AATATGGGTATGAATGTACATCCTTATATACCTCAAGTAGACAGTTGGACAGACCCGAACAGATCTTGTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061745.5 |
||