Pregenerated sensors for HOXB9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020875Ensembl transcript IDs: ENSMUST00000000010.9, ENSMUST00000174042.3
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAGTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATTaGGAAGCAGGGAGAGCAGAGAGGCAGAGAGGCAGAGAGGACCCC | + |
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Preference number: 1 (lower is better) Translates to: CSQEKREQKSTGGRD*EAGRAERQRGREDP Trigger: GGGGTCCTCTCTGCCTCTCTGCCTCTCTGCTCTCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGACTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CCA 90 bp | GCATCCACTGGGCTGTGTGCAGTTAAACTGTACCTGGGTGGCGTCTaGCTAGGTTACAGGGAGGGAACAGGCAGACTGGAAGAGAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: ASTGLCAVKLYLGGV*LGYREGTGRLEERG Trigger: GCCCCTCTCTTCCAGTCTGCCTGTTCCCTCCCTGTAACCTAGCCAGACGCCACCCAGGTACAGTTTAACTGCACACAGCCCAGTGGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR GCA 90 bp | CCACTAGCCCTGCTTGCTGAGGCCATTGCTCCTCCCGGCCCTGACTaGCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAATTT | + |
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Preference number: 1 (lower is better) Translates to: PLALLAEAIAPPGPD*LLWKGAGELIHNKF Trigger: AAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTCAGGGCCGGGAGGAGCAATGGCCTCAGCAAGCAGGGCTAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR GCA 90 bp | GGGGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTaGCAGAAGCGTATGCATGCAGCAGCAACAGGATGGATACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GEVRCLPLSCAHWTV*QKRMHAAATGWIQQ Trigger: CTGCTGTATCCATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR GCA 90 bp | GCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATGCATaGAGCAGCAACAGGATGGATACAGCAGTGGACTTTGCAGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: ASFLCTLDCLPEAYA*SSNRMDTAVDFAGG Trigger: ACCTCCTGCAAAGTCCACTGCTGTATCCATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR GCA 90 bp | GTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATaGATGCAGCAGCAACAGGATGGATACAGCAGTGGACTTTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VCLFPVHTGLFARSV*MQQQQDGYSSGLCR Trigger: CCTGCAAAGTCCACTGCTGTATCCATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CCA 90 bp | CTGCTTGCTGAGGCCATTGCTCCTCCCGGCCCTGACTGCCTACTCTaGAAGGGAGCTGGGGAATTGATTCACAATAAATTTTCAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: LLAEAIAPPGPDCLL*KGAGELIHNKFSDS Trigger: AGAGTCTGAAAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTCAGGGCCGGGAGGAGCAATGGCCTCAGCAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CCA 90 bp | AATGGCCACATCTGCCCACAGGCCTCCCCAGATATGGGGTCTAGCTaGCAATTCCATAGGATACATATTGGGATGTTGAGACTTTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: NGHICPQASPDMGSS*QFHRIHIGMLRLWD Trigger: GTCCCAAAGTCTCAACATCCCAATATGTATCCTATGGAATTGCCAGCTAGACCCCATATCTGGGGAGGCCTGTGGGCAGATGTGGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CCA 90 bp | TCTAGCTGGCAATTCCATAGGATACATATTGGGATGTTGAGACTTTaGGACTGCAGTGCCTCATTGAGGGCATCTCTAGACATCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: SSWQFHRIHIGMLRL*DCSASLRASLDIFL Trigger: TAGGAAGATGTCTAGAGATGCCCTCAATGAGGCACTGCAGTCCCAAAGTCTCAACATCCCAATATGTATCCTATGGAATTGCCAGCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CCA 90 bp | TTTTTCCTACAATGGGAGACTTGTCTTGCTGGTGCAAGATGGGTTTaGTGGAAAGGAGAGTTGATTTCAAAGTTGGAGGATAGAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: FFLQWETCLAGARWV*WKGELISKLEDREE Trigger: TTCCTCTCTATCCTCCAACTTTGAAATCAACTCTCCTTTCCACCAAACCCATCTTGCACCAGCAAGACAAGTCTCCCATTGTAGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTTGCTGAGGCCATTGCTCCTCCCGGCCCTGACTGCCTACTCTGGAAGGGCTTGGGGACAGGAATaGCCACATCTGCCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: PCLLRPLLLPALTAYSGRAWGQE*PHLPTG Trigger: GCCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGC...CCTTCCAGAGTAGGCAGTCAGGGCCGGGAGGAGCAATGGCCTCAGCAAGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTGCTTGCTGAGGCCATTGCTCCTCCCGGCCCTGACTGCCTACTCTGGAAGGAGGAATGGCCACATCTaGCCACAGGCCTCCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PCLLRPLLLPALTAYSGRRNGHI*PQASPD Trigger: ATCTGGGGAGGCCTGTGGGCAGATGTGGCCATTCCT...CCTTCCAGAGTAGGCAGTCAGGGCCGGGAGGAGCAATGGCCTCAGCAAGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGCCTCCCAGGCCTCCCCAGATATaGGGTCTAGCTGGCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: LAHNSLGTGMATSAHRPPRPPQI*GLAGNS Trigger: GGAATTGCCAGCTAGACCCCATATCTGGGGAGGCCT...GGGAGGCCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CAA 90 bp | TTGCAGTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATaGAGAAGCAGGGAGAGCAGAGAGGCAGAGAGGCAGAGAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: LQSGEAGTKVHGWKG*RSRESREAERQRGP Trigger: GGGTCCTCTCTGCCTCTCTGCCTCTCTGCTCTCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGACTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CAA 90 bp | GCAGTGGACTTTGCAGGAGGTGAAGTCCCCACTCTGAGTCTTCTTTaGGACCTCTGGCTGGATGCCAAGGGGCTCTCTTCTTCCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: AVDFAGGEVPTLSLL*DLWLDAKGLSSSWV Trigger: GACCCAGGAAGAAGAGAGCCCCTTGGCATCCAGCCAGAGGTCCAAAAGAAGACTCAGAGTGGGGACTTCACCTCCTGCAAAGTCCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGCCTCCCGGCTCCAGGTGCAGATaGGGGATTTTAAAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LAHNSLGTGMATSAHRPPGSRCR*GILKRR Trigger: TCTCCTCTTTAAAATCCCTCATCTGCACCTGGAGCC...GGGAGGCCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGCCTCCCCAAACTCTATGTCTGTaGGCATCCACTGGGCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LAHNSLGTGMATSAHRPPQTLCL*ASTGLC Trigger: ACACAGCCCAGTGGATGCCCACAGACATAGAGTTTG...GGGAGGCCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATAGGAATGGCCACATCTaGCCACAGGCCTCCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: GAMFASFLCTLDCLPEAYRNGHI*PQASPD Trigger: ATCTGGGGAGGCCTGTGGGCAGATGTGGCCATTCCT...ATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CCCGGCCCTGACTGCCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAAAGGCCTCCCCAGATATaGGGTCTAGCTGGCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: PGPDCLLWKGAGELIHNKRPPQI*GLAGNS Trigger: GGAATTGCCAGCTAGACCCCATATCTGGGGAGGCCT...TTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTCAGGGCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CAA 90 bp | TGGGGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTaGCCAGAAGCGTATGCATGCAGCAGCAACAGGATGGATACAGCA | + |
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Preference number: 2 (lower is better) Translates to: WGGAMFASFLCTLDC*PEAYACSSNRMDTA Trigger: TGCTGTATCCATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATTGAGAAGCAGGGAGGCTCCAGGTGCAGATaGGGGATTTTAAAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VRRSGNKSPRVEGIEKQGGSRCR*GILKRR Trigger: TCTCCTCTTTAAAATCCCTCATCTGCACCTGGAGCC...TCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGCAACCCAGACAGCAGTaGCTTTTTGACCATCACATA | + |
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Preference number: 2 (lower is better) Translates to: ALSSSQQLGDRNGHICPQQPRQQ*LFDHHI Trigger: TATGTGATGGTCAAAAAGCCACTGCTGTCTGGGTTG...CTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | TGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATGCGGGCTCTCTTCTTCCTaGGTCAGGAAACTGGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CDVCLFPVHTGLFARSVCGLSSS*VRKLVK Trigger: TTTCACCAGTTTCCTGACCCAGGAAGAAGAGAGCCC...GCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGGTCATCTTTACTCTTTaGCCTGCTCCTTATTCATCT | + |
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Preference number: 2 (lower is better) Translates to: PFLAHNSLGTGMATSAHRVIFTL*PAPYSS Trigger: AGATGAATAAGGAGCAGGGCAAAGAGTAAAGATGAC...CCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATTGAGAAGCAGGGATTCCTAGTGTGTGTTTaGATCAGGGCACAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VRRSGNKSPRVEGIEKQGFLVCV*IRAQPK Trigger: TTTTGGTTGTGCCCTGATCCAAACACACACTAGGAA...TCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTTTGGACCTCTGGCTGGATGCCAAGGGGCTCTCTTCTTCCTGGGTCAGTTCCTAGTGTGTGTTTaGATCAGGGCACAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SSFGPLAGCQGALFFLGQFLVCV*IRAQPK Trigger: TTTTGGTTGTGCCCTGATCCAAACACACACTAGGAA...CTGACCCAGGAAGAAGAGAGCCCCTTGGCATCCAGCCAGAGGTCCAAAAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR GCA 90 bp | GTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATTGAGAAGCAGGGACATAAAACCACTCCCTaGTTTTTCTTGCCCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: VRRSGNKSPRVEGIEKQGHKTTP*FFLPFL Trigger: TAGAAAGGGCAAGAAAAAGCAGGGAGTGGTTTTATG...TCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAAATCACAAGGGAACAGGCAGACTaGAAGAGAGGGGCTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PSTLPYKQQLKITAKEITREQAD*KRGAGV Trigger: AACCCCAGCCCCTCTCTTCCAGTCTGCCTGTTCCCT...TGTGATTTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATGGTGCAAGATGGGTTTaGTGGAAAGGAGAGTTGATT | + |
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Preference number: 2 (lower is better) Translates to: GAMFASFLCTLDCLPEAYGARWV*WKGELI Trigger: AATCAACTCTCCTTTCCACCAAACCCATCTTGCACC...ATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CAA 90 bp | GATATGGGGTCTAGCTGGCAATTCCATAGGATACATATTGGGATGTaGAGACTTTGGGACTGCAGTGCCTCATTGAGGGCATCTCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: DMGSSWQFHRIHIGM*RLWDCSASLRASLD Trigger: GTCTAGAGATGCCCTCAATGAGGCACTGCAGTCCCAAAGTCTCAACATCCCAATATGTATCCTATGGAATTGCCAGCTAGACCCCATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR GCA 90 bp | CAAATGGGGATAGGAATGTATGAATGGGGAAACAGCACTGTCAGGGCTCTACAATTGAGACTTTGGGACTaGAGTGCCTCATTGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QMGIGMYEWGNSTVRALQLRLWD*SASLRA Trigger: TGCCCTCAATGAGGCACTGCAGTCCCAAAGTCTCAA...TTGTAGAGCCCTGACAGTGCTGTTTCCCCATTCATACATTCCTATCCCCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGAAAGGAAAACATGCAGAATTAAACACTTCCTGCAGGGAAAATACGAGAGGGAACAGGCAGACTaGAAGAGAGGGGCTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: WKERKTCRIKHFLQGKYEREQAD*KRGAGV Trigger: AACCCCAGCCCCTCTCTTCCAGTCTGCCTGTTCCCT...CTCGTATTTTCCCTGCAGGAAGTGTTTAATTCTGCATGTTTTCCTTTCCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CAAATGGGGATAGGAATGTATGAATGGGGAAACAGCACTGTCAGGGCTCTACAAGGGATGTTGAGACTTTaGGACTGCAGTGCCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: QMGIGMYEWGNSTVRALQGMLRL*DCSASL Trigger: CAATGAGGCACTGCAGTCCCAAAGTCTCAACATCCC...TTGTAGAGCCCTGACAGTGCTGTTTCCCCATTCATACATTCCTATCCCCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTGGTGCAAGATGGGTTTGGTGGAAAGGAGAGTTGATTTCAAAGTTGGAGGGGGATAGGAATGTATaGATGGGGAAACAGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: LAGARWVWWKGELISKLEGDRNV*MGKQHC Trigger: ACAGTGCTGTTTCCCCATTCATACATTCCTATCCCC...CTCCAACTTTGAAATCAACTCTCCTTTCCACCAAACCCATCTTGCACCAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCCACCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAACAACCCAGACAGCAGTaGCTTTTTGACCATCACATA | + |
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Preference number: 2 (lower is better) Translates to: LPPSTLPYKQQLKITAKEQPRQQ*LFDHHI Trigger: TATGTGATGGTCAAAAAGCCACTGCTGTCTGGGTTG...TTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGGTGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAAATCACAAAAGTTCTACTGGAATaGCCTCTTTGCAGTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSTLPYKQQLKITAKEITKVLLE*PLCSQE Trigger: CTCCTGACTGCAAAGAGGTCATTCCAGTAGAACTTT...TGTGATTTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTGGTGCAAGATGGGTTTGGTGGAAAGGAGAGTTGATTTCAAAGTTGGAGAGGAATCTGAGACTGTaGTCAGCAAGAAAAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: LAGARWVWWKGELISKLERNLRL*SARKVT Trigger: TGTAACTTTTCTTGCTGACCACAGTCTCAGATTCCT...CTCCAACTTTGAAATCAACTCTCCTTTCCACCAAACCCATCTTGCACCAGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAAATCACAATAGGAATGTATGAATaGGGAAACAGCACTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSTLPYKQQLKITAKEITIGMYE*GNSTVR Trigger: CCTGACAGTGCTGTTTCCCCATTCATACATTCCTAT...TGTGATTTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAAATCACAAGGAATCTGAGACTGTaGTCAGCAAGAAAAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: PSTLPYKQQLKITAKEITRNLRL*SARKVT Trigger: TGTAACTTTTCTTGCTGACCACAGTCTCAGATTCCT...TGTGATTTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAAATCACAAATTCAAAGTTCTACTaGAATGACCTCTTTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: PSTLPYKQQLKITAKEITNSKFY*NDLFAV Trigger: GACTGCAAAGAGGTCATTCCAGTAGAACTTTGAATT...TGTGATTTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR GCA 72 bp | CTGCTTGCTGAGGCCATTGCTCCTCCCGGCCCTGACTaGCTACTCTGGAAGGGAGCTGGGGAATTGATTCAC | + |
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Preference number: 3 (lower is better) Translates to: LLAEAIAPPGPD*LLWKGAGELIH Trigger: GTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTCAGGGCCGGGAGGAGCAATGGCCTCAGCAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGCCTCCCGACTGCAGTGCCTCATaGAGGGCATCTCTAGACATC | + |
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Preference number: 3 (lower is better) Translates to: LAHNSLGTGMATSAHRPPDCSAS*RASLDI Trigger: GATGTCTAGAGATGCCCTCAATGAGGCACTGCAGTC...GGGAGGCCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR-3UTR CAA 90 bp | GGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGCTCTTCCCCACTCACTaGGGTACAACCCAGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: GGAMFASFLCTLDCLPEALFPTH*GTTQTA Trigger: TGCTGTCTGGGTTGTACCCAAGTGAGTGGGGAAGAG...CGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR TCA 72 bp | CAGCAGTGGACTTTGCAGGAGGTGAAGTCCCCACTCTaGGTCTTCTTTTGGACCTCTGGCTGGATGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QQWTLQEVKSPL*VFFWTSGWMPR Trigger: CCTTGGCATCCAGCCAGAGGTCCAAAAGAAGACTCAGAGTGGGGACTTCACCTCCTGCAAAGTCCACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR GCA 72 bp | GCACGATGGGGAGGTGCGATGTTTGCCTCTTTCCTGTaGACACTGGACTGTTTGCCAGAAGCGTATGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: ARWGGAMFASFL*TLDCLPEAYAC Trigger: GCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCCCCATCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATTGAGAAGCAGGGAGACTGCAGTGCCTCATaGAGGGCATCTCTAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: VRRSGNKSPRVEGIEKQGDCSAS*RASLDI Trigger: GATGTCTAGAGATGCCCTCAATGAGGCACTGCAGTC...TCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | CACGGGTGGAAGGGATTGAGAAGCAGGGAGAGCAGAGAGGCAGAGAGGCAGAGATGGTGCAAGATGGGTTaGGTGGAAAGGAGAGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HGWKGLRSRESREAERQRWCKMG*VERRVD Trigger: ATCAACTCTCCTTTCCACCAAACCCATCTTGCACCA...TCTCTGCCTCTCTGCCTCTCTGCTCTCCCTGCTTCTCAATCCCTTCCACCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGCCTCCCGGTCATCTTTACTCTTaGCCCTGCTCCTTATTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LAHNSLGTGMATSAHRPPGHLYS*PCSLFI Trigger: GATGAATAAGGAGCAGGGCAAAGAGTAAAGATGACC...GGGAGGCCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCACGATGGGGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGGGATGTTGAGACTTaGGGACTGCAGTGCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LHDGEVRCLPLSCAHWTVWDVET*GLQCLI Trigger: AATGAGGCACTGCAGTCCCAAAGTCTCAACATCCCA...AACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCCCCATCGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR GCA 72 bp | CGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTaGCAGAAGCGTATGCATGCAGCAGCAACAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: RCLPLSCAHWTV*QKRMHAAATGW Trigger: CCATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR CCA 72 bp | GAGGCCATTGCTCCTCCCGGCCCTGACTGCCTACTCTaGAAGGGAGCTGGGGAATTGATTCACAATAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: EAIAPPGPDCLL*KGAGELIHNKF Trigger: AAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTCAGGGCCGGGAGGAGCAATGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR GCA 72 bp | CTGTGCACACTGGACTGTTTGCCAGAAGCGTATGCATaGAGCAGCAACAGGATGGATACAGCAGTGGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LCTLDCLPEAYA*SSNRMDTAVDF Trigger: AAAGTCCACTGCTGTATCCATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR GCA 72 bp | TTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATaGATGCAGCAGCAACAGGATGGATACAGCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPVHTGLFARSV*MQQQQDGYSSG Trigger: TCCACTGCTGTATCCATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | GACTGCCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAATTTTCAGACCTCTTCCCCACTCACTaGGGTACAACCCAGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DCLLWKGAGELIHNKFSDLFPTH*GTTQTA Trigger: TGCTGTCTGGGTTGTACCCAAGTGAGTGGGGAAGAG...GTCTGAAAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCTACAATGGGAGACTTGTCTTGCTGGTGCAAGATGGGTTTGGTGGAAAGGAGACTCCCTGCTTTTTCTaGCCCTTTCTAGCTCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: SYNGRLVLLVQDGFGGKETPCFF*PFLAHN Trigger: GTTGTGAGCTAGAAAGGGCAAGAAAAAGCAGGGAGT...CTCCTTTCCACCAAACCCATCTTGCACCAGCAAGACAAGTCTCCCATTGTAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGAAGGGAGCTGGGGAATaGATTCACAATAAATTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGAMFASFLCTLDCLPEAKGAGE*IHNKFS Trigger: TGAAAATTTATTGTGAATCAATTCCCCAGCTCCCTT...CGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCACCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAAAATGGGAGACTTGTCTaGCTGGTGCAAGATGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPPSTLPYKQQLKITAKENGRLV*LVQDGF Trigger: AAACCCATCTTGCACCAGCAAGACAAGTCTCCCATT...TTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGGTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR-3UTR CAA 90 bp | GACTGCCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAATTTTCAGACCCTACAATGGGAGACTaGTCTTGCTGGTGCAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: DCLLWKGAGELIHNKFSDPTMGD*SCWCKM Trigger: CATCTTGCACCAGCAAGACAAGTCTCCCATTGTAGG...GTCTGAAAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR TCA 72 bp | GGAAACAGCACTGTCAGGGCTCTACAACCCACAATTTaGCCTCCTTTAGTTGGAAGGAAAGGAAAACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: GNSTVRALQPTI*PPLVGRKGKHA Trigger: TGCATGTTTTCCTTTCCTTCCAACTAAAGGAGGTCAAATTGTGGGTTGTAGAGCCCTGACAGTGCTGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR CCA 72 bp | CAATTCCATAGGATACATATTGGGATGTTGAGACTTTaGGACTGCAGTGCCTCATTGAGGGCATCTCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QFHRIHIGMLRL*DCSASLRASLD Trigger: GTCTAGAGATGCCCTCAATGAGGCACTGCAGTCCCAAAGTCTCAACATCCCAATATGTATCCTATGGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR CCA 72 bp | GTTACATTCTGTCAAATGGGGATAGGAATGTATGAATaGGGAAACAGCACTGTCAGGGCTCTACAACCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VTFCQMGIGMYE*GNSTVRALQPT Trigger: TGTGGGTTGTAGAGCCCTGACAGTGCTGTTTCCCCATTCATACATTCCTATCCCCATTTGACAGAATGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| 3UTR CCA 72 bp | TTCCTACAATGGGAGACTTGTCTTGCTGGTGCAAGATaGGTTTGGTGGAAAGGAGAGTTGATTTCAAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLQWETCLAGAR*VWWKGELISKL Trigger: CAACTTTGAAATCAACTCTCCTTTCCACCAAACCCATCTTGCACCAGCAAGACAAGTCTCCCATTGTAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGCGGGCGTGCCCTGTTTaGGCAGCTCCCCCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGAMFASFLCTLDCLPEARACPV*AAPPAR Trigger: GCGCGCCGGGGGAGCTGCTCAAACAGGGCACGCCCG...CGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGTCGGCGTGGCCCGGCTaGCGCGGGTTCGCGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLAHNSLGTGMATSAHRSAWPG*RGFAYW Trigger: CCAGTACGCGAACCCGCGGCAGCCGGGCCACGCCGA...CCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGTCCAGGTGCTCGGCGTaGCCCGGCTGCCGCGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLAHNSLGTGMATSAHRSRCSA*PGCRGF Trigger: GAACCCGCGGCAGCCGGGCCACGCCGAGCACCTGGA...CCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | GCCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGAGGGGAAGTCCAGGTaGTCGGCGTGGCCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSSSQQLGDRNGHICPQEGKSR*SAWPGC Trigger: GCAGCCGGGCCACGCCGAGCACCTGGACTTCCCCTC...CTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTTTGGACCTCTGGCTGGATGCCAAGGGGCTCTCTTCTTCCTGGGTCAGTCCAGGTGCTCGGCGTaGCCCGGCTGCCGCGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFGPLAGCQGALFFLGQSRCSA*PGCRGF Trigger: GAACCCGCGGCAGCCGGGCCACGCCGAGCACCTGGA...CTGACCCAGGAAGAAGAGAGCCCCTTGGCATCCAGCCAGAGGTCCAAAAGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGGAGGGGAAGTCCAGGTaGTCGGCGTGGCCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGAMFASFLCTLDCLPEAEGKSR*SAWPGC Trigger: GCAGCCGGGCCACGCCGAGCACCTGGACTTCCCCTC...CGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | GGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATTCGGCGTGGCCCGGCTaGCGCGGGTTCGCGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAMFASFLCTLDCLPEAYSAWPG*RGFAYW Trigger: CCAGTACGCGAACCCGCGGCAGCCGGGCCACGCCGA...ATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGACCGGCGCTTTGGGCTaGAAGCTGCACGAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLAHNSLGTGMATSAHRTGALG*KLHEGK Trigger: CTTCCCCTCGTGCAGCTTCCAGCCCAAAGCGCCGGT...CCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | TGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATGCCGGGAAGAGCGGGCGTaGAGCCAGTTGGCAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDVCLFPVHTGLFARSVCREERA*SQLAEG Trigger: CCCCTCTGCCAACTGGCTGCACGCCCGCTCTTCCCG...GCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGACCGGCGCTTTGGGCTaGAAGCTGCACGAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGAMFASFLCTLDCLPEATGALG*KLHEGK Trigger: CTTCCCCTCGTGCAGCTTCCAGCCCAAAGCGCCGGT...CGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGACAGGACAGCCTCCCTaGCCGCCGAAGTTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGAMFASFLCTLDCLPEATGQPP*PPKFPN Trigger: GTTTGGAAACTTCGGCGGGCAGGGAGGCTGTCCTGT...CGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGCCCTGACTGCCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAACGAAGGAAACTTGGCTaGAGGCGCGTCCTCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGPDCLLWKGAGELIHNKRRKLG*RRVLAL Trigger: GAGAGCGAGGACGCGCCTCCAGCCAAGTTTCCTTCG...TTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTCAGGGCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR TCA 90 bp | TGGCGTCTGGCTAGGTTACAGGGAGGGAACAGGCAGACTGGAAGAGAGGGGCTGCGCTCTCGTGACTTATaGTCGAGTCGACATAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRLARLQGGNRQTGREGLRSRDL*SSRHNS Trigger: GCTATTATGTCGACTCGATCATAAGTCACGAGAGCG...CAGCCCCTCTCTTCCAGTCTGCCTGTTCCCTCCCTGTAACCTAGCCAGACGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGAATTAAACACTTCCTGCAGGGAAAATACGAGGGGACTCCACTAATGGTAAGGTGCGGAGGTACCTaGTTTCGGCCGCCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CRIKHFLQGKYEGTPLMVRCGGT*FRPPAR Trigger: GCGCGCCGGCGGCCGAAAGCAGGTACCTCCGCACCT...TACCATTAGTGGAGTCCCCTCGTATTTTCCCTGCAGGAAGTGTTTAATTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTTGCCAGAAGCGTATCGCGGGTTCGCGTACTaGCCCGAAGGAAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAMFASFLCTLDCLPEAYRGFAY*PEGNLA Trigger: AGCCAAGTTTCCTTCGGGCCAGTACGCGAACCCGCG...ATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAATTTTCAGACCGGGAAGAGCGGGCGTaGAGCCAGTTGGCAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DCLLWKGAGELIHNKFSDREERA*SQLAEG Trigger: CCCCTCTGCCAACTGGCTGCACGCCCGCTCTTCCCG...GTCTGAAAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAATCTGAGACTGTGGTCAGCAAGAAAAGTTACATTCTGTCAAATGGGGGGCCCGAAGGAAACTTaGCTGGAGGCGCGTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ERNLRLWSARKVTFCQMGGPKET*LEARPR Trigger: GCGAGGACGCGCCTCCAGCCAAGTTTCCTTCGGGCC...CCCCATTTGACAGAATGTAACTTTTCTTGCTGACCACAGTCTCAGATTCCTCTC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | TCCTACAATGGGAGACTTGTCTTGCTGGTGCAAGATGGGTTTGGTGGAAAGGAGGGGCGTGCAGCCAGTTaGCAGAGGGGTTGGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYNGRLVLLVQDGFGGKEGRAAS*QRGWFD Trigger: ATCAAACCAACCCCTCTGCCAACTGGCTGCACGCCC...CTCCTTTCCACCAAACCCATCTTGCACCAGCAAGACAAGTCTCCCATTGTAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
||
| CDS-3UTR CCA 90 bp | CAAATGGGGATAGGAATGTATGAATGGGGAAACAGCACTGTCAGGGCTCTACAAGGGCGTGCAGCCAGTTaGCAGAGGGGTTGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QMGIGMYEWGNSTVRALQGRAAS*QRGWLL Trigger: AAGCAGCCAACCCCTCTGCCAACTGGCTGCACGCCC...TTGTAGAGCCCTGACAGTGCTGTTTCCCCATTCATACATTCCTATCCCCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174042.3 |
||
| 3UTR CAA 72 bp | GCGATGTTTGCCTCTTTCCTGTGCACACTGGACTGTTaGCCAGAAGCGTATGCATGCAGCAGCAACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AMFASFLCTLDC*PEAYACSSNRM Trigger: CATCCTGTTGCTGCTGCATGCATACGCTTCTGGCAAACAGTCCAGTGTGCACAGGAAAGAGGCAAACATCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR TCA 90 bp | GTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATTGAGAAGCAGGGACGCTCTCGTGACTTATaGTCGAGTCGACATAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRRSGNKSPRVEGIEKQGRSRDL*SSRHNS Trigger: GCTATTATGTCGACTCGATCATAAGTCACGAGAGCG...TCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR TCA 90 bp | AGACTCCAAACTCTATGTCTGTGGGCATCCACTGGGCTGTGTGCAGTTAAACTGGCGTCCTCGCTCTCGTaGCTTATGATCGAGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLQTLCLWASTGLCAVKLASSLS*LMIEST Trigger: TGTCGACTCGATCATAAGTCACGAGAGCGAGGACGC...CAGTTTAACTGCACACAGCCCAGTGGATGCCCACAGACATAGAGTTTGGAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAAAAATTAGCAGGGATGCTAGGAGCTCGACTAGGGTCTCTTTCCTCGGAGAGTTGGCAGAGGGGTTaGTTTGATCCGGCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PEKLAGMLGARLGSLSSESWQRG*FDPASL Trigger: AAGAGAGGCCGGATCAAACCAACCCCTCTGCCAACT...CTCCGAGGAAAGAGACCCTAGTCGAGCTCCTAGCATCCCTGCTAATTTTTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
||
| CDS-3UTR TCA 90 bp | GGGATTTTAAAGAGGAGATACTCTTCCCCACTCACTTGGGTACAACCCAGACAGGCGTCCTCGCTCTCGTaGCTTATGATCGAGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: GILKRRYSSPLTWVQPRQASSLS*LMIEST Trigger: TGTCGACTCGATCATAAGTCACGAGAGCGAGGACGC...CTGTCTGGGTTGTACCCAAGTGAGTGGGGAAGAGTATCTCCTCTTTAAAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR GCA 90 bp | CAAATGGGGATAGGAATGTATGAATGGGGAAACAGCACTGTCAGGGCTCTACAACTTTGGGCTGGAAGCTaGACGAGGGGAAGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QMGIGMYEWGNSTVRALQLWAGS*TRGSPG Trigger: ACCTGGACTTCCCCTCGTGCAGCTTCCAGCCCAAAG...TTGTAGAGCCCTGACAGTGCTGTTTCCCCATTCATACATTCCTATCCCCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAATCTGAGACTGTGGTCAGCAAGAAAAGTTACATTCTGTCAAATGGGGCGAAGGAAACTTGGCTaGAGGCGCGTCCTCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERNLRLWSARKVTFCQMGRRKLG*RRVLAL Trigger: GAGAGCGAGGACGCGCCTCCAGCCAAGTTTCCTTCG...CCCCATTTGACAGAATGTAACTTTTCTTGCTGACCACAGTCTCAGATTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAATTTTCAGACCGCGGGTTCGCGTACTaGCCCGAAGGAAACTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: DCLLWKGAGELIHNKFSDRGFAY*PEGNLA Trigger: AGCCAAGTTTCCTTCGGGCCAGTACGCGAACCCGCG...GTCTGAAAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS-3UTR TCA 90 bp | AGACTCCAAACTCTATGTCTGTGGGCATCCACTGGGCTGTGTGCAGTTAAACTGGTCTCTCACTCAGATTaGGGAGTCTGGCCACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RLQTLCLWASTGLCAVKLVSHSD*GVWPLH Trigger: ATGAAGTGGCCAGACTCCTCAATCTGAGTGAGAGAC...CAGTTTAACTGCACACAGCCCAGTGGATGCCCACAGACATAGAGTTTGGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| 3UTR CAA 72 bp | ATTGGGATGTTGAGACTTTGGGACTGCAGTGCCTCATaGAGGGCATCTCTAGACATCTTCCTAGTGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IGMLRLWDCSAS*RASLDIFLVCV Trigger: AACACACACTAGGAAGATGTCTAGAGATGCCCTCAATGAGGCACTGCAGTCCCAAAGTCTCAACATCCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CAA 72 bp | TCTAGCTGGCAATTCCATAGGATACATATTGGGATGTaGAGACTTTGGGACTGCAGTGCCTCATTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSWQFHRIHIGM*RLWDCSASLRA Trigger: TGCCCTCAATGAGGCACTGCAGTCCCAAAGTCTCAACATCCCAATATGTATCCTATGGAATTGCCAGCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CAA 72 bp | GGGAAACAGCACTGTCAGGGCTCTACAACCCACAATTaGACCTCCTTTAGTTGGAAGGAAAGGAAAACATGC | + |
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Preference number: 4 (lower is better) Translates to: GKQHCQGSTTHN*TSFSWKERKTC Trigger: GCATGTTTTCCTTTCCTTCCAACTAAAGGAGGTCAAATTGTGGGTTGTAGAGCCCTGACAGTGCTGTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| 3UTR CAA 72 bp | ACAATGGGAGACTTGTCTTGCTGGTGCAAGATGGGTTaGGTGGAAAGGAGAGTTGATTTCAAAGTTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TMGDLSCWCKMG*VERRVDFKVGG Trigger: TCCTCCAACTTTGAAATCAACTCTCCTTTCCACCAAACCCATCTTGCACCAGCAAGACAAGTCTCCCATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS GCA 90 bp | CGGCCTCGGCGCGCGGCGCCGGCTCTAGCCAGGTGCGGAGGTACCTaGTTTCGGCCGCCGGCGCGCCCTGGGGCTGCAGGTAGGGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RPRRAAPALARCGGT*FRPPARPGAAGRGG Trigger: ACCACCCCTACCTGCAGCCCCAGGGCGCGCCGGCGGCCGAAAGCAGGTACCTCCGCACCTGGCTAGAGCCGGCGCCGCGCGCCGAGGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| CDS GCA 90 bp | GCGGCGCCCAGGAGGCGCCGAACACCGGCGCTTTGGGCTGGAAGCTaGACGAGGGGAAGTCCAGGTGCTCGGCGTGGCCCGGCTGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: AAPRRRRTPALWAGS*TRGSPGARRGPAAA Trigger: CGCGGCAGCCGGGCCACGCCGAGCACCTGGACTTCCCCTCGTGCAGCTTCCAGCCCAAAGCGCCGGTGTTCGGCGCCTCCTGGGCGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS CCA 90 bp | GCCCGGCTGCCGCGGGTTCGCGTACTGGCCCGAAGGAAACTTGGCTaGAGGCGCGTCCTCGCTCTCGTGACTTATGATCGAGTCGACATA | + |
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Preference number: 5 (lower is better) Translates to: ARLPRVRVLARRKLG*RRVLALVTYDRVDI Trigger: TATGTCGACTCGATCATAAGTCACGAGAGCGAGGACGCGCCTCCAGCCAAGTTTCCTTCGGGCCAGTACGCGAACCCGCGGCAGCCGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS-3UTR CAA 90 bp | GTCAGGAGAAGCGGGAACAAAAGTCCACGGGTGGAAGGGATTGAGAAGCAGGGATCGGGCGTGCCCTGTTaGAGCAGCTCCCCCGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: VRRSGNKSPRVEGIEKQGSGVPC*SSSPGA Trigger: CGCGCCGGGGGAGCTGCTCAAACAGGGCACGCCCGA...TCCCTGCTTCTCAATCCCTTCCACCCGTGGACTTTTGTTCCCGCTTCTCCTGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| CDS-3UTR CAA 90 bp | CCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGTGGCCCGAAGGAAACTaGGCTGGAGGCGCGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PFLAHNSLGTGMATSAHRWPEGN*AGGASS Trigger: CGAGGACGCGCCTCCAGCCAAGTTTCCTTCGGGCCA...CCTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS-3UTR CAA 90 bp | GCCCTTTCTAGCTCACAACAGCTTGGGGACAGGAATGGCCACATCTGCCCACAGGGCAGAGGGGTTGGTTaGATCCGGCCTCTCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: ALSSSQQLGDRNGHICPQGRGVG*IRPLFV Trigger: GACAAAGAGAGGCCGGATCAAACCAACCCCTCTGCC...CTGTGGGCAGATGTGGCCATTCCTGTCCCCAAGCTGTTGTGAGCTAGAAAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| CDS-3UTR CAA 90 bp | AGACTCCAAACTCTATGTCTGTGGGCATCCACTGGGCTGTGTGCAGTTAAACTGCAGTTGGCAGAGGGGTaGGCTGCTTTCGGCCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RLQTLCLWASTGLCAVKLQLAEG*AAFGRR Trigger: CCGGCGGCCGAAAGCAGCCAACCCCTCTGCCAACTG...CAGTTTAACTGCACACAGCCCAGTGGATGCCCACAGACATAGAGTTTGGAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174042.3 |
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| CDS-3UTR CAA 90 bp | GACTGCCTACTCTGGAAGGGAGCTGGGGAATTGATTCACAATAAATTTTCAGACTGGCCCGAAGGAAACTaGGCTGGAGGCGCGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: DCLLWKGAGELIHNKFSDWPEGN*AGGASS Trigger: CGAGGACGCGCCTCCAGCCAAGTTTCCTTCGGGCCA...GTCTGAAAATTTATTGTGAATCAATTCCCCAGCTCCCTTCCAGAGTAGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS-3UTR CAA 90 bp | GGGATTTTAAAGAGGAGATACTCTTCCCCACTCACTTGGGTACAACCCAGACAGTGTCTCTCACTCAGATaGAGGAGTCTGGCCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: GILKRRYSSPLTWVQPRQCLSLR*RSLATS Trigger: TGAAGTGGCCAGACTCCTCAATCTGAGTGAGAGACA...CTGTCTGGGTTGTACCCAAGTGAGTGGGGAAGAGTATCTCCTCTTTAAAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| CDS-3UTR CAA 90 bp | CCCTCAACCCTCCCTTATAAGCAACAACTGAAAATCACTGCCAAAGAAATCACACCCGTAGCCAGCTCTTaGATTAGACAGGACAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PSTLPYKQQLKITAKEITPVASS*IRQDSL Trigger: GAGGCTGTCCTGTCTAATCAAAGAGCTGGCTACGGG...TGTGATTTCTTTGGCAGTGATTTTCAGTTGTTGCTTATAAGGGAGGGTTGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| CDS GCA 72 bp | CGCGCGGCGCCGGCTCTAGCCAGGTGCGGAGGTACCTaGTTTCGGCCGCCGGCGCGCCCTGGGGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RAAPALARCGGT*FRPPARPGAAG Trigger: ACCTGCAGCCCCAGGGCGCGCCGGCGGCCGAAAGCAGGTACCTCCGCACCTGGCTAGAGCCGGCGCCGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| CDS CCA 72 bp | TGCTCGGCGTGGCCCGGCTGCCGCGGGTTCGCGTACTaGCCCGAAGGAAACTTGGCTGGAGGCGCGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: CSAWPGCRGFAY*PEGNLAGGASS Trigger: CGAGGACGCGCCTCCAGCCAAGTTTCCTTCGGGCCAGTACGCGAACCCGCGGCAGCCGGGCCACGCCGAGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS GCA 72 bp | AGGAGGCGCCGAACACCGGCGCTTTGGGCTGGAAGCTaGACGAGGGGAAGTCCAGGTGCTCGGCGTGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: RRRRTPALWAGS*TRGSPGARRGP Trigger: CGGGCCACGCCGAGCACCTGGACTTCCCCTCGTGCAGCTTCCAGCCCAAAGCGCCGGTGTTCGGCGCCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS GCA 72 bp | CACGAGGGGAAGTCCAGGTGCTCGGCGTGGCCCGGCTaGCGCGGGTTCGCGTACTGGCCCGAAGGAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: HEGKSRCSAWPG*RGFAYWPEGNL Trigger: CAAGTTTCCTTCGGGCCAGTACGCGAACCCGCGGCAGCCGGGCCACGCCGAGCACCTGGACTTCCCCTCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS CCA 72 bp | CCGCGGGTTCGCGTACTGGCCCGAAGGAAACTTGGCTaGAGGCGCGTCCTCGCTCTCGTGACTTATGATCGA | + |
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Preference number: 6 (lower is better) Translates to: PRVRVLARRKLG*RRVLALVTYDR Trigger: TCGATCATAAGTCACGAGAGCGAGGACGCGCCTCCAGCCAAGTTTCCTTCGGGCCAGTACGCGAACCCGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000010.9 ENSMUST00000174042.3 |
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| CDS CAA 72 bp | TCCTTCGCAAATTTTATTGTCCCCGTAGCCAGCTCTTaGATTAGACAGGACAGCCTCCCTGCCCGCCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SFANFIVPVASS*IRQDSLPARRS Trigger: ACTTCGGCGGGCAGGGAGGCTGTCCTGTCTAATCAAAGAGCTGGCTACGGGGACAATAAAATTTGCGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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| CDS CAA 90 bp | GTCCTCGCTTCCTTCGCAAATTTTATTGTCCCCGTAGCCAGCTCTTaGATTAGACAGGACAGCCTCCCTGCCCGCCGAAGTTTCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: VLASFANFIVPVASS*IRQDSLPARRSFQT Trigger: AGTTTGGAAACTTCGGCGGGCAGGGAGGCTGTCCTGTCTAATCAAAGAGCTGGCTACGGGGACAATAAAATTTGCGAAGGAAGCGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000010.9 |
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