Pregenerated sensors for HOXA10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000938Ensembl transcript IDs: ENSMUST00000121043.2, ENSMUST00000125581.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGAGTGTGGGAGGGAGAAAGGGGCTCCGGCACAGGTGTGAGTTCTaGGGCAGAGGCTGGAGGCAGAGGATGGGTCCAGGCGCTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: ASVGGRKGLRHRCEF*GRGWRQRMGPGAQE Trigger: TTCCTGAGCGCCTGGACCCATCCTCTGCCTCCAGCCTCTGCCCCAGAACTCACACCTGTGCCGGAGCCCCTTTCTCCCTCCCACACTCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 90 bp | CAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTaGGAGGGAGAAAGGGGCTCCGGCACAGGTGTGAGTTCTGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QTSPAQTKRPGRWRV*EGERGSGTGVSSGA Trigger: TGCCCCAGAACTCACACCTGTGCCGGAGCCCCTTTCTCCCTCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 90 bp | AGTTTACCCAGGGCTGGGCAGGAAACCAGATCCGTGGAGGAGTACTaGGGCCCTTTCCTAGCAGTGGGTCCCAGAGGCAGCAAACCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SLPRAGQETRSVEEY*GPFLAVGPRGSKPS Trigger: GCTGGGTTTGCTGCCTCTGGGACCCACTGCTAGGAAAGGGCCCCAGTACTCCTCCACGGATCTGGTTTCCTGCCCAGCCCTGGGTAAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 90 bp | CGCCGACAATGGGACCTAAGGCTTCCGGCTAAGTTTACCCAGGGCTaGGCAGGAAACCAGATCCGTGGAGGAGTACTGGGGCCCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: RRQWDLRLPAKFTQG*AGNQIRGGVLGPFP Trigger: AGGAAAGGGCCCCAGTACTCCTCCACGGATCTGGTTTCCTGCCCAGCCCTGGGTAAACTTAGCCGGAAGCCTTAGGTCCCATTGTCGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 90 bp | CTCCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATaGGACCTAAGGCTTCCGGCTAAGTTTACCCAGGGCTGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LLAPLTSGQTPQRRQ*DLRLPAKFTQGWAG Trigger: TCCTGCCCAGCCCTGGGTAAACTTAGCCGGAAGCCTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 90 bp | AGCCCTTTAGCTAACCTGAATGTCCATGCTTCCATACTCTGCTCTTaGCCAAGGAAGAAAAGAAGAAAGAAAAGAGAAACCAGGCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SPLANLNVHASILCS*PRKKRRKKRETRPG Trigger: TCCAGGCCTGGTTTCTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGAAGCATGGACATTCAGGTTAGCTAAAGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAACCAGGCCTGGACTCCCTGATTAAACACAGCCCAGCACTCCAGGCTGGCGCTCCGGCACAGGTGTaGGTTCTGGGGCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: EKPGLDSLIKHSPALQAGAPAQV*VLGQRL Trigger: CAGCCTCTGCCCCAGAACTCACACCTGTGCCGGAGC...GCCAGCCTGGAGTGCTGGGCTGTGTTTAATCAGGGAGTCCAGGCCTGGTTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAACCAGGCCTGGACTCCCTGATTAAACACAGCCCAGCACTCCAGGCTGGCCCGGTGGCGGCTCCTTaGACCATTGACCTCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: EKPGLDSLIKHSPALQAGPVAAP*TIDLRP Trigger: TGGCCTGAGGTCAATGGTGCAAGGAGCCGCCACCGG...GCCAGCCTGGAGTGCTGGGCTGTGTTTAATCAGGGAGTCCAGGCCTGGTTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAGCTGGAGGCAGAGGATaGGTCCAGGCGCTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LLAPLTSGQTPQRRQWDLAGGRG*VQALRK Trigger: CTTCCTGAGCGCCTGGACCCATCCTCTGCCTCCAGC...TAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGTACTGGGGCCCTTTCCTAGCAGTGGGTCCCAGAGGCAGCAAACCCAGCAAACGGCCTGGGAGATaGCGAGTGTGGGAGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: EEYWGPFLAVGPRGSKPSKRPGR*RVWEGE Trigger: TTCTCCCTCCCACACTCGCCATCTCCCAGGCCGTTT...GCTGGGTTTGCTGCCTCTGGGACCCACTGCTAGGAAAGGGCCCCAGTACTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGCAGGAAACCAGATCCGTGGAGGAGTACTGGGGCCCTTTCCTAGCAGTAAACGGCCTGGGAGATaGCGAGTGTGGGAGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GWAGNQIRGGVLGPFPSSKRPGR*RVWEGE Trigger: TTCTCCCTCCCACACTCGCCATCTCCCAGGCCGTTT...ACTGCTAGGAAAGGGCCCCAGTACTCCTCCACGGATCTGGTTTCCTGCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGGCTTCCGGCTACAGACGAAACGGCCTaGGAGATGGCGAGTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LTSGQTPQRRQWDLRLPATDETA*EMASVG Trigger: TCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGT...AGCCGGAAGCCTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGAACAAACCAGCCCTaGACAGACGAAACGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLAPLTSGQTPQRRQWDLRTNQP*TDETAW Trigger: CCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGTTCT...TAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGGCTTCCGGCTAAGTTTACCCAGGGCTaGGCAGGAAACCAGATCCGT | + |
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Preference number: 2 (lower is better) Translates to: LTSGQTPQRRQWDLRLPAKFTQG*AGNQIR Trigger: ACGGATCTGGTTTCCTGCCCAGCCCTGGGTAAACTT...AGCCGGAAGCCTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAAGTTTACCCAGGGCTaGGCAGGAAACCAGATCCGT | + |
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Preference number: 2 (lower is better) Translates to: LLAPLTSGQTPQRRQWDLKFTQG*AGNQIR Trigger: ACGGATCTGGTTTCCTGCCCAGCCCTGGGTAAACTT...TAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGAAACCAGGCCTGGACTCCCTGGCTCCGGCACAGGTGTaGGTTCTGGGGCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGQGRKEERKEKPGLDSLAPAQV*VLGQRL Trigger: CAGCCTCTGCCCCAGAACTCACACCTGTGCCGGAGC...CAGGGAGTCCAGGCCTGGTTTCTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGCCCATTCAGGACTTGACACTGAGAAAGATCTCAACCTCTATAGAATTTGCTGGAGGCAGAGGATaGGTCCAGGCGCTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TQPIQDLTLRKISTSIEFAGGRG*VQALRK Trigger: CTTCCTGAGCGCCTGGACCCATCCTCTGCCTCCAGC...AAATTCTATAGAGGTTGAGATCTTTCTCAGTGTCAAGTCCTGAATGGGCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTTTTTCACTTTTTCAACCAGCCAGGTCAAGCCCTTTAGCTAACCTGAATCACAGGTGTGAGTTCTaGGGCAGAGGCTGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ISFSLFQPARSSPLANLNHRCEF*GRGWRQ Trigger: CTGCCTCCAGCCTCTGCCCCAGAACTCACACCTGTG...ATTCAGGTTAGCTAAAGGGCTTGACCTGGCTGGTTGAAAAAGTGAAAAAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTTTTTCACTTTTTCAACCAGCCAGGTCAAGCCCTTTAGCTAACCTGAATTCCATACTCTGCTCTTaGCCAAGGAAGAAAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: ISFSLFQPARSSPLANLNSILCS*PRKKRR Trigger: TCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGA...ATTCAGGTTAGCTAAAGGGCTTGACCTGGCTGGTTGAAAAAGTGAAAAAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| 3UTR CCA 72 bp | GGGCTCCGGCACAGGTGTGAGTTCTGGGGCAGAGGCTaGAGGCAGAGGATGGGTCCAGGCGCTCAGGAAGCG | + |
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Preference number: 3 (lower is better) Translates to: GLRHRCEFWGRG*RQRMGPGAQEA Trigger: CGCTTCCTGAGCGCCTGGACCCATCCTCTGCCTCCAGCCTCTGCCCCAGAACTCACACCTGTGCCGGAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR TCA 72 bp | CAGGCTGGCGAACCCGGTGGCGGCTCCTTGCACCATTaGCCTCAGGCCAGACACCTCAGCGCCGACAATGGG | + |
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Preference number: 3 (lower is better) Translates to: QAGEPGGGSLHH*PQARHLSADNG Trigger: CCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAGCCGCCACCGGGTTCGCCAGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 72 bp | AGGGCTGGGCAGGAAACCAGATCCGTGGAGGAGTACTaGGGCCCTTTCCTAGCAGTGGGTCCCAGAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RAGQETRSVEEY*GPFLAVGPRGS Trigger: GCTGCCTCTGGGACCCACTGCTAGGAAAGGGCCCCAGTACTCCTCCACGGATCTGGTTTCCTGCCCAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 72 bp | TGGGACCTAAGGCTTCCGGCTAAGTTTACCCAGGGCTaGGCAGGAAACCAGATCCGTGGAGGAGTACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: WDLRLPAKFTQG*AGNQIRGGVLG Trigger: CCCCAGTACTCCTCCACGGATCTGGTTTCCTGCCCAGCCCTGGGTAAACTTAGCCGGAAGCCTTAGGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR CCA 72 bp | CCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATaGGACCTAAGGCTTCCGGCTAAGTTTACCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: PLTSGQTPQRRQ*DLRLPAKFTQG Trigger: GCCCTGGGTAAACTTAGCCGGAAGCCTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| 3UTR GCA 72 bp | CCTTTAGCTAACCTGAATGTCCATGCTTCCATACTCTaGTCTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: PLANLNVHASIL*SWPRKKRRKKR Trigger: TCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGAAGCATGGACATTCAGGTTAGCTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| CDS-3UTR TCA 90 bp | CAGAACAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGGCCTGTGGCTGGGGTTaGGGTGGCTGCGGCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QNKPALHRRNGLGDGECGACGWG*GGCGGG Trigger: GCCCCCGCCGCAGCCACCTCAACCCCAGCCACAGGC...CCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGTTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR CCA 90 bp | AACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGAGGGAGACTGCTGCTGGGGTTGTaGCTGCGGTGGCGGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NQPCTDETAWEMASVGGRLLLGL*LRWRRP Trigger: GGGCCGCCGCCACCGCAGCCACAACCCCAGCAGCAG...TCTCCCTCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | GCAGAGGCTGGAGGCAGAGGATGGGTCCAGGCGCTCAGGAAGCGAAAAGACGTTTGCTGGGGTTGTGGCTaGGGTGGCGGCGGCCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: AEAGGRGWVQALRKRKDVCWGCG*GGGGPS Trigger: CGACGGGCCGCCGCCACCGCAGCCACAACCCCAGCA...AACGTCTTTTCGCTTCCTGAGCGCCTGGACCCATCCTCTGCCTCCAGCCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| 3UTR CAA 72 bp | CCAGGCTGGCGAACCCGGTGGCGGCTCCTTGCACCATaGACCTCAGGCCAGACACCTCAGCGCCGACAATGG | + |
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Preference number: 4 (lower is better) Translates to: PGWRTRWRLLAP*TSGQTPQRRQW Trigger: CCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAGCCGCCACCGGGTTCGCCAGCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| CDS-3UTR TCA 90 bp | ACAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGAGGGCTCAGCCGCCGAGGATaGCGCGTGTGCCTCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: TNQPCTDETAWEMASVGGLSRRG*RVCLLV Trigger: GACGAGGAGGCACACGCGTCATCCTCGGCGGCTGAG...CCCTCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | TTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGGCTTCCGGCTCGAGCCAGAGGCCAGTaGGGGCGGCGGGTCGAAACC | + |
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Preference number: 4 (lower is better) Translates to: LTSGQTPQRRQWDLRLPARARGQ*GRRVET Trigger: GGTTTCGACCCGCCGCCCGCACTGGCCTCTGGCTCG...AGCCGGAAGCCTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGCTGGAGGCAGAGGATGGGTCCAGGCGCTCAGGAAGCGAAAAGACGTTGGTACTGGCACTCCGCTaGAGGCGCCCAGGGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QRLEAEDGSRRSGSEKTLVLALR*RRPGRS Trigger: GCTGCGCCCTGGGCGCCTCCAGCGGAGTGCCAGTAC...CAACGTCTTTTCGCTTCCTGAGCGCCTGGACCCATCCTCTGCCTCCAGCCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR CCA 90 bp | GGGAGATGGCGAGTGTGGGAGGGAGAAAGGGGCTCCGGCACAGGTGTGAGTTCTCACTGCCGAAGCCCTTaGCCGTGCCGTAGGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: GRWRVWEGERGSGTGVSSHCRSP*PCRRPA Trigger: CGCAGGCCTACGGCACGGCCAAGGGCTTCGGCAGTG...AGAACTCACACCTGTGCCGGAGCCCCTTTCTCCCTCCCACACTCGCCATCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCGAACCCGGTGGCGGCTCCTTGCACCATTGACCTCAGGCCAGACACCCTTCATTACGCTTGCTaGCCAGCGCGGGGAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RLANPVAAPCTIDLRPDTLHYAC*PARGRA Trigger: GGCTCTTCCCCGCGCTGGGCAGCAAGCGTAATGAAG...GGTGTCTGGCCTGAGGTCAATGGTGCAAGGAGCCGCCACCGGGTTCGCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR TCA 90 bp | GGCTGGGCAGGAAACCAGATCCGTGGAGGAGTACTGGGGCCCTTTCCTAGCAGTGGTGGACGCTACGGCTaGTCTCTAGGCGCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GWAGNQIRGGVLGPFPSSGGRYG*SLGAAL Trigger: GAGAGCGGCGCCTAGAGATCAGCCGTAGCGTCCACC...ACTGCTAGGAAAGGGCCCCAGTACTCCTCCACGGATCTGGTTTCCTGCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | CAGAACAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGGGCTGCTGCTGCTGCTaGTGGGGTTGTGGCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QNKPALHRRNGLGDGECGGCCCC*WGCGCG Trigger: ACCGCAGCCACAACCCCAGCAGCAGCAGCAGCAGCC...CCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGTTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR TCA 90 bp | CCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGGGTGGACGCTACGGCTaGTCTCTAGGCGCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PCTIDLRPDTSAPTMGPKGGRYG*SLGAAL Trigger: GAGAGCGGCGCCTAGAGATCAGCCGTAGCGTCCACC...CTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| CDS-3UTR CCA 90 bp | CCGGTGGCGGCTCCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACATGTCTGTCCGTGAGGTaGACGCTACGGCTGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: PVAAPCTIDLRPDTSAPTCLSVR*TLRLIS Trigger: AGAGATCAGCCGTAGCGTCCACCTCACGGACAGACA...TGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAGCCGCCACCGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| CDS-3UTR CCA 90 bp | AACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGAGGGAGAACACGAAGTGGCCTGTaGCTGGGGTTGAGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NQPCTDETAWEMASVGGRTRSGL*LGLRWL Trigger: CAGCCACCTCAACCCCAGCCACAGGCCACTTCGTGT...TCTCCCTCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR CCA 90 bp | AGAACAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGACGGCGGCCGAGCCCTTaGGGCATTTGTCCGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RTNQPCTDETAWEMASVGRRPSP*GICPQH Trigger: ATGCTGCGGACAAATGCCCCAAGGGCTCGGCCGCCG...TCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | CAGAACAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGCTTCCGGCCGCTCTTTaGTGTGAGCCAGTTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QNKPALHRRNGLGDGECGLPAAL*CEPVGC Trigger: GCAGCCAACTGGCTCACAGCAAAGAGCGGCCGGAAG...CCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCAAACCCAGCCCATTCAGGACTTGACACTGAGAAAGATCTCAACCTCGGACTAGCGAGCTGCTaGGTGCCGCCGCCGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: EAANPAHSGLDTEKDLNLGLASC*VPPPPL Trigger: CAGTGGCGGCGGCGGCACGCAGCAGCTCGCTAGTCC...GAGGTTGAGATCTTTCTCAGTGTCAAGTCCTGAATGGGCTGGGTTTGCTGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | ACAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGAGGGTTTCGCCTTTGGAACTaGCCAGGGAGTCCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: TNQPCTDETAWEMASVGGFRLWN*PGSPSP Trigger: CGGAGAAGGACTCCCTGGGCAGTTCCAAAGGCGAAA...CCCTCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR GCA 90 bp | GCTCTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGAAACCAGGCCTGGACTCCTGCCGCCGCCGCCACTaGCGAAGCCCTTGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: ALGQGRKEERKEKPGLDSCRRRH*RSPWPC Trigger: GCACGGCCAAGGGCTTCGGCAGTGGCGGCGGCGGCA...GGAGTCCAGGCCTGGTTTCTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS-3UTR CCA 90 bp | CCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGTGTCTGTCCGTGAGGTaGACGCTACGGCTGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCTIDLRPDTSAPTMGPKCLSVR*TLRLIS Trigger: AGAGATCAGCCGTAGCGTCCACCTCACGGACAGACA...CTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGATGGCGAGTGTGGGAGGGAGAAAGGGGCTCCGGCACAGGTGTGAGTTCTAGGGCTCTCCGAGCATaGCATTGTTGTGGGATAATT | + |
|
Preference number: 4 (lower is better) Translates to: GRWRVWEGERGSGTGVSSRALRA*HCCGII Trigger: AATTATCCCACAACAATGTCATGCTCGGAGAGCCCT...AGAACTCACACCTGTGCCGGAGCCCCTTTCTCCCTCCCACACTCGCCATCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGAGGGAGAAAGGGGCTTGTTGTGGGATAATTTaGCGAAGGGAGCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHRRNGLGDGECGREKGACCGII*RREQIA Trigger: GGCTATCTGCTCCCTTCGCCAAATTATCCCACAACA...AGCCCCTTTCTCCCTCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGGCTGGCGAACCCGGTGGCGGCTCCTTGCACCATTGACCTCAGGCCAGAGCATGACATTGTTGTaGGATAATTTGGCGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPGWRTRWRLLAPLTSGQSMTLL*DNLAKG Trigger: TCCCTTCGCCAAATTATCCCACAACAATGTCATGCT...CTGGCCTGAGGTCAATGGTGCAAGGAGCCGCCACCGGGTTCGCCAGCCTGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR TCA 90 bp | CCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGAGCTTTACTGTTTTCTaGAGGGGCTGGAGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCTIDLRPDTSAPTMGPKSFTVF*RGWRQL Trigger: GAGCTGTCTCCAGCCCCTTCAGAAAACAGTAAAGCT...CTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGCAGGAAACCAGATCCGTGGAGGAGTACTGGGGCCCTTTCCTAGCAGTTGTGAGCCAGTTGGCTaGATTTTCGCCTTTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GWAGNQIRGGVLGPFPSSCEPVG*IFAFGT Trigger: AGTTCCAAAGGCGAAAATGCAGCCAACTGGCTCACA...ACTGCTAGGAAAGGGCCCCAGTACTCCTCCACGGATCTGGTTTCCTGCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
||
| CDS-3UTR TCA 90 bp | CAGAACAAACCAGCCCTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGAGGAGCTCTCTTCTTTaGTGTTCTGCGCAAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNKPALHRRNGLGDGECGRSSLL*CSAQKN Trigger: GTTCTTTTGCGCAGAACATCAAAGAAGAGAGCTCCT...CCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAGGGCTGGTTTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGCAAACCCAGCCCATTCAGGACTTGACACTGAGAAAGATCTCAACCTCGGCCGCTCTTTGCTGTaGGCCAGTTGGCTGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAANPAHSGLDTEKDLNLGRSLL*ASWLHF Trigger: AAAATGCAGCCAACTGGCTCACAGCAAAGAGCGGCC...GAGGTTGAGATCTTTCTCAGTGTCAAGTCCTGAATGGGCTGGGTTTGCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGCTTCCATACTCTGCTCTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGCGTAGGGCAGGTCGCTaGCAGGCGGCAGGTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SMLPYSALGQGRKEERKERRAGR*QAAGRP Trigger: GGGTCTACCTGCCGCCTGCCAGCGACCTGCCCTACG...CTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGAAGCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR GCA 90 bp | GCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTAAGGCTTTCTTCTTTGATGTTCTaGGCAAAAGAACACGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: APLTSGQTPQRRQWDLRLSSLMF*AKEHEV Trigger: CACTTCGTGTTCTTTTGCGCAGAACATCAAAGAAGA...AAGCCTTAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR GCA 90 bp | TCCATGCTTCCATACTCTGCTCTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGCTTCCGGCCGCTCTTTaGTGTGAGCCAGTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLPYSALGQGRKEERKELPAAL*CEPVGC Trigger: GCAGCCAACTGGCTCACAGCAAAGAGCGGCCGGAAG...CTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGAAGCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTTTTCACTTTTTCAACCAGCCAGGTCAAGCCCTTTAGCTAACCTGAATCTGCATTTTCGCCTTTaGAACTGCCCAGGGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFSLFQPARSSPLANLNLHFRL*NCPGSP Trigger: AGGACTCCCTGGGCAGTTCCAAAGGCGAAAATGCAG...ATTCAGGTTAGCTAAAGGGCTTGACCTGGCTGGTTGAAAAAGTGAAAAAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGACTTGACACTGAGAAAGATCTCAACCTCTATAGAATTTTAGCGATATGGTGTGAGCCAGTTGGCTaGATTTTCGCCTTTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGLDTEKDLNLYRILAIWCEPVG*IFAFGT Trigger: AGTTCCAAAGGCGAAAATGCAGCCAACTGGCTCACA...CCATATCGCTAAAATTCTATAGAGGTTGAGATCTTTCTCAGTGTCAAGTCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
||
| CDS CCA 90 bp | CTTGGCCGTGCCGTAGGCCTGCGACAGGCGGAAGTAGCCGGGTACTaGCACTCCGCTGGAGGCGCCCAGGGCGCAGCCGTCGGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRAVGLRQAEVAGY*HSAGGAQGAAVGRR Trigger: CCGCCGCCCGACGGCTGCGCCCTGGGCGCCTCCAGCGGAGTGCCAGTACCCGGCTACTTCCGCCTGTCGCAGGCCTACGGCACGGCCAAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 90 bp | CGAGCTGCTGCGTGCCGCCGCCGCCACTGCCGAAGCCCTTGGCCGTaGCGTAGGCCTGCGACAGGCGGAAGTAGCCGGGTACTGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RAAACRRRHCRSPWP*RRPATGGSSRVLAL Trigger: GAGTGCCAGTACCCGGCTACTTCCGCCTGTCGCAGGCCTACGGCACGGCCAAGGGCTTCGGCAGTGGCGGCGGCGGCACGCAGCAGCTCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 90 bp | CACCACCGCCACCGCCTCCGGGCGACGGCGCTTCATTACGCTTGCTaGCCAGCGCGGGGAAGAGCCCGCAGCTTTGCAGCCCGTAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HHRHRLRATALHYAC*PARGRARSFAARRA Trigger: TGCCCTACGGGCTGCAAAGCTGCGGGCTCTTCCCCGCGCTGGGCAGCAAGCGTAATGAAGCGCCGTCGCCCGGAGGCGGTGGCGGTGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 90 bp | TGCCACCACCGCCACCGCCTCCGGGCGACGGCGCTTCATTACGCTTaGTGCCCAGCGCGGGGAAGAGCCCGCAGCTTTGCAGCCCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHHRHRLRATALHYA*CPARGRARSFAARR Trigger: CCTACGGGCTGCAAAGCTGCGGGCTCTTCCCCGCGCTGGGCAGCAAGCGTAATGAAGCGCCGTCGCCCGGAGGCGGTGGCGGTGGTGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 90 bp | AGCTCCTCAGCCGCCGAGGATGACGCGTGTGCCTCCTCGTCGCCCTaGGAGCCGCCGCCACCGGTGCAAACCAGAGTGGGTGGTGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSAAEDDACASSSP*EPPPPVQTRVGGGV Trigger: CACGCCACCACCCACTCTGGTTTGCACCGGTGGCGGCGGCTCGCAGGGCGACGAGGAGGCACACGCGTCATCCTCGGCGGCTGAGGAGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 90 bp | GCGCGGGGAAGAGCCCGCAGCTTTGCAGCCCGTAGGGCAGGTCGCTaGCAGGCGGCAGGTAGACCCCACCGTGGGCGTAGTAGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARGRARSFAARRAGR*QAAGRPHRGRSSHL Trigger: GAGGTGGCTACTACGCCCACGGTGGGGTCTACCTGCCGCCTGCCAGCGACCTGCCCTACGGGCTGCAAAGCTGCGGGCTCTTCCCCGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 90 bp | CCTGCGAGCCGCCGCCACCGGTGCAAACCAGAGTGGGTGGTGGCGTaGAGTCTAGGACTCGCTCCTTCCCGGCTGCCTCGGTCGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PASRRHRCKPEWVVA*SLGLAPSRLPRSSQ Trigger: CTGGCTCGACCGAGGCAGCCGGGAAGGAGCGAGTCCTAGACTCCACGCCACCACCCACTCTGGTTTGCACCGGTGGCGGCGGCTCGCAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 90 bp | CCTCCTCGTCGCCCTGCGAGCCGCCGCCACCGGTGCAAACCAGAGTaGGTGGTGGCGTGGAGTCTAGGACTCGCTCCTTCCCGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPRRPASRRHRCKPE*VVAWSLGLAPSRLP Trigger: AGGCAGCCGGGAAGGAGCGAGTCCTAGACTCCACGCCACCACCCACTCTGGTTTGCACCGGTGGCGGCGGCTCGCAGGGCGACGAGGAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 90 bp | ATGACGCGTGTGCCTCCTCGTCGCCCTGCGAGCCGCCGCCACCGGTaGAAACCAGAGTGGGTGGTGGCGTGGAGTCTAGGACTCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MTRVPPRRPASRRHR*KPEWVVAWSLGLAP Trigger: AGGAGCGAGTCCTAGACTCCACGCCACCACCCACTCTGGTTTGCACCGGTGGCGGCGGCTCGCAGGGCGACGAGGAGGCACACGCGTCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 90 bp | GCGGGCCCCGCGGGAAAGGGGCCAGATCAGCGGCGGCCGAGCCCTTaGGGCATTTGTCCGCAGCATCGTAGAGGCAGTAGGAGCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPAGKGPDQRRPSP*GICPQHRRGSRSSL Trigger: AAGAGAGCTCCTACTGCCTCTACGATGCTGCGGACAAATGCCCCAAGGGCTCGGCCGCCGCTGATCTGGCCCCTTTCCCGCGGGGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGCTGGAGGCAGAGGATGGGTCCAGGCGCTCAGGAAGCGAAAAGACGTTGAAGAGCCCGCAGCTTaGCAGCCCGTAGGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AEAGGRGWVQALRKRKDVEEPAA*QPVGQV Trigger: GACCTGCCCTACGGGCTGCAAAGCTGCGGGCTCTTC...AACGTCTTTTCGCTTCCTGAGCGCCTGGACCCATCCTCTGCCTCCAGCCTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | CGAGTGTGGGAGGGAGAAAGGGGCTCCGGCACAGGTGTGAGTTCTGGGGCAGAGTTGTTGTGGGATAATTaGGCGAAGGGAGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVWEGERGSGTGVSSGAELLWDN*AKGADS Trigger: GCTATCTGCTCCCTTCGCCAAATTATCCCACAACAA...CTCTGCCCCAGAACTCACACCTGTGCCGGAGCCCCTTTCTCCCTCCCACACTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACAGACGAAACGGCCTGGGAGATGGCGAGTGTGGGAGGGAGAAAGGGGCTCAGGAAAAATTAAAGTaGGCTGTGAGCTCCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LHRRNGLGDGECGREKGAQEKLK*AVSSRI Trigger: AATCCGGGAGCTCACAGCCAACTTTAATTTTTCCTG...AGCCCCTTTCTCCCTCCCACACTCGCCATCTCCCAGGCCGTTTCGTCTGTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGCTTCCATACTCTGCTCTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGCTGCTGCTGCTGGGGTaGTGGCTGCGGTGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SMLPYSALGQGRKEERKELLLLG*WLRWRR Trigger: CCGCCGCCACCGCAGCCACAACCCCAGCAGCAGCAG...CTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGAAGCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS TCA 90 bp | GAGCGAGTCGACCAAAAAGGAGTTCGCGGCAGGGCTCTCCGAGCATaGCATTGTTGTGGGATAATTTGGCGAAGGGAGCAGATAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ERVDQKGVRGRALRA*HCCGIIWRREQIAL Trigger: AAGGGCTATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCTGCCGCGAACTCCTTTTTGGTCGACTCGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCACCATTGACCTCAGGCCAGACACCTCAGCGCCGACAATGGGACCTACCGAGCATGACATTGTaGTGGGATAATTTGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLAPLTSGQTPQRRQWDLPSMTL*WDNLAK Trigger: CTTCGCCAAATTATCCCACAACAATGTCATGCTCGG...TAGGTCCCATTGTCGGCGCTGAGGTGTCTGGCCTGAGGTCAATGGTGCAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 90 bp | CCAAAAAGGAGTTCGCGGCAGGGCTCTCCGAGCATGACATTGTTGTaGGATAATTTGGCGAAGGGAGCAGATAGCCCTTTCTGGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PKRSSRQGSPSMTLL*DNLAKGADSPFWLT Trigger: TGTCAGCCAGAAAGGGCTATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCTGCCGCGAACTCCTTTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCATACTCTGCTCTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGAAACCAGCGGCGGCCGAGCCCTaGGGGCATTTGTCCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPYSALGQGRKEERKEKPAAAEP*GHLSAA Trigger: TGCTGCGGACAAATGCCCCAAGGGCTCGGCCGCCGC...TGGTTTCTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGCTTCCATACTCTGCTCTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGGCTGCATTTTCGCCTTaGGAACTGCCCAGGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMLPYSALGQGRKEERKEAAFSP*ELPRES Trigger: GGACTCCCTGGGCAGTTCCAAAGGCGAAAATGCAGC...CTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAGAGCAGAGTATGGAAGCATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGCCAAGGAAGAAAAGAAGAAAGAAAAGAGAAACCAGGCCTGGACTCCCTGTCTCCGAGCATGACATaGTTGTGGGATAATTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGQGRKEERKEKPGLDSLSPSMT*LWDNLA Trigger: CGCCAAATTATCCCACAACAATGTCATGCTCGGAGA...CAGGGAGTCCAGGCCTGGTTTCTCTTTTCTTTCTTCTTTTCTTCCTTGGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGACTTGACACTGAGAAAGATCTCAACCTCTATAGAATTTTAGCGATATGGCAGGAAAAATTAAAGTaGGCTGTGAGCTCCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SGLDTEKDLNLYRILAIWQEKLK*AVSSRI Trigger: AATCCGGGAGCTCACAGCCAACTTTAATTTTTCCTG...CCATATCGCTAAAATTCTATAGAGGTTGAGATCTTTCTCAGTGTCAAGTCCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121043.2 ENSMUST00000125581.2 |
||
| CDS CCA 72 bp | GCGACAGGCGGAAGTAGCCGGGTACTGGCACTCCGCTaGAGGCGCCCAGGGCGCAGCCGTCGGGCGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATGGSSRVLALR*RRPGRSRRAAG Trigger: GCCCGCCGCCCGACGGCTGCGCCCTGGGCGCCTCCAGCGGAGTGCCAGTACCCGGCTACTTCCGCCTGTCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 72 bp | CGGCTGCTGCTGCTGCTGCTGGGGTTGTGGCTGCGGTaGCGGCGGCCCGTCGGGCGGCTCCATCCGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLLLLLLGLWLR*RRPVGRLHPAG Trigger: TCCTGCCGGATGGAGCCGCCCGACGGGCCGCCGCCACCGCAGCCACAACCCCAGCAGCAGCAGCAGCAGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 72 bp | CCCGGGGGCTGCGCAGGAAAGGGACTAGCGAGCTGCTaGGTGCCGCCGCCGCCACTGCCGAAGCCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGGCAGKGLASC*VPPPPLPKPLA Trigger: GGCCAAGGGCTTCGGCAGTGGCGGCGGCGGCACGCAGCAGCTCGCTAGTCCCTTTCCTGCGCAGCCCCCGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 72 bp | CGCCCCGGGGGCTGCGCAGGAAAGGGACTAGCGAGCTaGTGCGTGCCGCCGCCGCCACTGCCGAAGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPGGCAGKGLAS*CVPPPPLPKPL Trigger: CAAGGGCTTCGGCAGTGGCGGCGGCGGCACGCAGCAGCTCGCTAGTCCCTTTCCTGCGCAGCCCCCGGGGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 72 bp | GCCGTAGGCCTGCGACAGGCGGAAGTAGCCGGGTACTaGCACTCCGCTGGAGGCGCCCAGGGCGCAGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: AVGLRQAEVAGY*HSAGGAQGAAV Trigger: GACGGCTGCGCCCTGGGCGCCTCCAGCGGAGTGCCAGTACCCGGCTACTTCCGCCTGTCGCAGGCCTACGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 72 bp | GCCGCCGAGGATGACGCGTGTGCCTCCTCGTCGCCCTaGGAGCCGCCGCCACCGGTGCAAACCAGAGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AAEDDACASSSP*EPPPPVQTRVG Trigger: ACCCACTCTGGTTTGCACCGGTGGCGGCGGCTCGCAGGGCGACGAGGAGGCACACGCGTCATCCTCGGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CAA 72 bp | ACGCTTGCTGCCCAGCGCGGGGAAGAGCCCGCAGCTTaGCAGCCCGTAGGGCAGGTCGCTGGCAGGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLAAQRGEEPAA*QPVGQVAGRRQ Trigger: CTGCCGCCTGCCAGCGACCTGCCCTACGGGCTGCAAAGCTGCGGGCTCTTCCCCGCGCTGGGCAGCAAGCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CAA 72 bp | CCGCCACCGCCTCCGGGCGACGGCGCTTCATTACGCTaGCTGCCCAGCGCGGGGAAGAGCCCGCAGCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPPPGDGASLR*LPSAGKSPQLC Trigger: GCAAAGCTGCGGGCTCTTCCCCGCGCTGGGCAGCAAGCGTAATGAAGCGCCGTCGCCCGGAGGCGGTGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 72 bp | CACCGCCTCCGGGCGACGGCGCTTCATTACGCTTGCTaGCCAGCGCGGGGAAGAGCCCGCAGCTTTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HRLRATALHYAC*PARGRARSFAA Trigger: GGCTGCAAAGCTGCGGGCTCTTCCCCGCGCTGGGCAGCAAGCGTAATGAAGCGCCGTCGCCCGGAGGCGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 72 bp | CGCCACCGCCTCCGGGCGACGGCGCTTCATTACGCTTaGTGCCCAGCGCGGGGAAGAGCCCGCAGCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHRLRATALHYA*CPARGRARSFA Trigger: TGCAAAGCTGCGGGCTCTTCCCCGCGCTGGGCAGCAAGCGTAATGAAGCGCCGTCGCCCGGAGGCGGTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CAA 90 bp | CGCTTCATTACGCTTGCTGCCCAGCGCGGGGAAGAGCCCGCAGCTTaGCAGCCCGTAGGGCAGGTCGCTGGCAGGCGGCAGGTAGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: RFITLAAQRGEEPAA*QPVGQVAGRRQVDP Trigger: GGGGTCTACCTGCCGCCTGCCAGCGACCTGCCCTACGGGCTGCAAAGCTGCGGGCTCTTCCCCGCGCTGGGCAGCAAGCGTAATGAAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS GCA 72 bp | GTGCCTCCTCGTCGCCCTGCGAGCCGCCGCCACCGGTaGAAACCAGAGTGGGTGGTGGCGTGGAGTCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPPRRPASRRHR*KPEWVVAWSLG Trigger: TCCTAGACTCCACGCCACCACCCACTCTGGTTTGCACCGGTGGCGGCGGCTCGCAGGGCGACGAGGAGGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 72 bp | AGAGCCCGCAGCTTTGCAGCCCGTAGGGCAGGTCGCTaGCAGGCGGCAGGTAGACCCCACCGTGGGCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RARSFAARRAGR*QAAGRPHRGRS Trigger: ACTACGCCCACGGTGGGGTCTACCTGCCGCCTGCCAGCGACCTGCCCTACGGGCTGCAAAGCTGCGGGCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
||
| CDS CCA 72 bp | CGCCGCCACCGGTGCAAACCAGAGTGGGTGGTGGCGTaGAGTCTAGGACTCGCTCCTTCCCGGCTGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRHRCKPEWVVA*SLGLAPSRLPR Trigger: CCGAGGCAGCCGGGAAGGAGCGAGTCCTAGACTCCACGCCACCACCCACTCTGGTTTGCACCGGTGGCGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS CCA 72 bp | CGCCCTGCGAGCCGCCGCCACCGGTGCAAACCAGAGTaGGTGGTGGCGTGGAGTCTAGGACTCGCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RPASRRHRCKPE*VVAWSLGLAPS Trigger: GGAAGGAGCGAGTCCTAGACTCCACGCCACCACCCACTCTGGTTTGCACCGGTGGCGGCGGCTCGCAGGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS CCA 72 bp | GCGGGAAAGGGGCCAGATCAGCGGCGGCCGAGCCCTTaGGGCATTTGTCCGCAGCATCGTAGAGGCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: AGKGPDQRRPSP*GICPQHRRGSR Trigger: CCTACTGCCTCTACGATGCTGCGGACAAATGCCCCAAGGGCTCGGCCGCCGCTGATCTGGCCCCTTTCCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS TCA 72 bp | CGCGCTACCGCCACCAACACCAGCCTCGCCTCTGCCTaGGCTGATGAGCGAGTCGACCAAAAAGGAGTTCGC | + |
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Preference number: 6 (lower is better) Translates to: RATATNTSLASA*ADERVDQKGVR Trigger: GCGAACTCCTTTTTGGTCGACTCGCTCATCAGCTCAGGCAGAGGCGAGGCTGGTGTTGGTGGCGGTAGCGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS TCA 72 bp | CAGGGAGTCCTTCTCCGGCGAAGCTTTACTGTTTTCTaGAGGGGCTGGAGACAGCTCCTCAGCCGCCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: QGVLLRRSFTVF*RGWRQLLSRRG Trigger: TCCTCGGCGGCTGAGGAGCTGTCTCCAGCCCCTTCAGAAAACAGTAAAGCTTCGCCGGAGAAGGACTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS CAA 72 bp | CAGCGTTTCTTCCGGCCGCTCTTTGCTGTGAGCCAGTaGGCTGCATTTTCGCCTTTGGAACTGCCCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QRFFRPLFAVSQ*AAFSPLELPRE Trigger: CTCCCTGGGCAGTTCCAAAGGCGAAAATGCAGCCAACTGGCTCACAGCAAAGAGCGGCCGGAAGAAACGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS CAA 72 bp | AGGAGTTCGCGGCAGGGCTCTCCGAGCATGACATTGTaGTGGGATAATTTGGCGAAGGGAGCAGATAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RSSRQGSPSMTL*WDNLAKGADSP Trigger: AGGGCTATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCTGCCGCGAACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS CAA 90 bp | CGACCAAAAAGGAGTTCGCGGCAGGGCTCTCCGAGCATGACATTGTaGTGGGATAATTTGGCGAAGGGAGCAGATAGCCCTTTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPKRSSRQGSPSMTL*WDNLAKGADSPFWL Trigger: CAGCCAGAAAGGGCTATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCTGCCGCGAACTCCTTTTTGGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS TCA 72 bp | GACCAAAAAGGAGTTCGCGGCAGGGCTCTCCGAGCATaGCATTGTTGTGGGATAATTTGGCGAAGGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: DQKGVRGRALRA*HCCGIIWRREQ Trigger: CTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCTGCCGCGAACTCCTTTTTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS CAA 90 bp | AGTCGACCAAAAAGGAGTTCGCGGCAGGGCTCTCCGAGCATGACATaGTTGTGGGATAATTTGGCGAAGGGAGCAGATAGCCCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRPKRSSRQGSPSMT*LWDNLAKGADSPFW Trigger: CCAGAAAGGGCTATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCTGCCGCGAACTCCTTTTTGGTCGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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| CDS CAA 72 bp | AAAAGGAGTTCGCGGCAGGGCTCTCCGAGCATGACATaGTTGTGGGATAATTTGGCGAAGGGAGCAGATAGC | + |
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Preference number: 6 (lower is better) Translates to: KRSSRQGSPSMT*LWDNLAKGADS Trigger: GCTATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCTGCCGCGAACTCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125581.2 |
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