RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HOOK2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052566

Ensembl transcript IDs: ENSMUST00000064495.8, ENSMUST00000209764.2, ENSMUST00000210326.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACTCACTCTGTAGACCAGGCTCGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGTGCTGGGATTTTAAAGGCGTGTGCCACC +
Preference number: 1 (lower is better)
Translates to: NSLCRPGSPRTQKSA*LCLPSAGILKACAT
Trigger: GGTGGCACACGCCTTTAAAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCGAGCCTGGTCTACAGAGTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR TCA 90 bp ATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCACT +
Preference number: 1 (lower is better)
Translates to: ISLRMVVSHHVVAGI*TLDLQKSSRVLLPT
Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR CCA 90 bp GAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTT +
Preference number: 1 (lower is better)
Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQSGAL
Trigger: AAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 90 bp AAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTGCTACCTaGCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGT +
Preference number: 1 (lower is better)
Translates to: KKNHIAKRNSSTPAT*LSPSLPSKEAKGRS
Trigger: ACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGCAGGTAGCAGGTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR TCA 90 bp CAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTACTTaGCCTGAGCTGACTGGGTCTCTTCACCCACAATTCTCCACACCT +
Preference number: 1 (lower is better)
Translates to: QFQVHNFQSQNKDST*PELTGSLHPQFSTP
Trigger: AGGTGTGGAGAATTGTGGGTGAAGAGACCCAGTCAGCTCAGGTCAAGTAGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 90 bp TACGGCCTTCCTCGGAACTCCATGAGATCATGTGGTACACAGACATaGAGGCAAAACACTCACACACATAAAATCAGTACACTTCAAAAA +
Preference number: 1 (lower is better)
Translates to: YGLPRNSMRSCGTQT*RQNTHTHKISTLQK
Trigger: TTTTTGAAGTGTACTGATTTTATGTGTGTGAGTGTTTTGCCTGCATGTCTGTGTACCACATGATCTCATGGAGTTCCGAGGAAGGCCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR TCA 90 bp ACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTaGGAGCAAGACATGTTAGTACACACCTTCTATCTTAGCACTTGG +
Preference number: 1 (lower is better)
Translates to: THKISTLQKQAQDHP*EQDMLVHTFYLSTW
Trigger: CCAAGTGCTAAGATAGAAGGTGTGTACTAACATGTCTTGCTCTCAAGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR CAA 90 bp GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCAC +
Preference number: 2 (lower is better)
Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGALTH
Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR-3UTR CCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATGGTCAAAGGCCCAGCTaGGTAAATGTAAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNGQRPS*VNVNWK
Trigger: CTTCCAGTTTACATTTACCCAGCTGGGCCTTTGACC...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR-3UTR TCA 90 bp TCCATGAGATCATGTGGTACACAGACATGCAGGCAAAACACTCACACACATAAACTACTTGACCTGAGCTaGCTGGGTCTCTTCACCCAC +
Preference number: 2 (lower is better)
Translates to: SMRSCGTQTCRQNTHTHKLLDLS*LGLFTH
Trigger: GTGGGTGAAGAGACCCAGTCAGCTCAGGTCAAGTAG...TTTATGTGTGTGAGTGTTTTGCCTGCATGTCTGTGTACCACATGATCTCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR-3UTR TCA 90 bp CACTTTGTAGACCAGGCTGGCCTCAAACTCAGATATATATATAGATATAGATATAGACTCTACTTGACCTaGGCTGACTGGGTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: HFVDQAGLKLRYIYRYRYRLYLT*ADWVSS
Trigger: TGAAGAGACCCAGTCAGCTCAGGTCAAGTAGAGTCT...ATATCTATATCTATATATATATCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 72 bp CCTCTGCCTCCCAAGTGCTGGGATTTTAAAGGCGTGTaGCACCACCGCCCAGCAGCTTACGGCCTTCCTCGG +
Preference number: 3 (lower is better)
Translates to: PLPPKCWDFKGV*HHRPAAYGLPR
Trigger: CCGAGGAAGGCCGTAAGCTGCTGGGCGGTGGTGGCACACGCCTTTAAAATCCCAGCACTTGGGAGGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 72 bp CCAGGCTCGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCAAGTGCTGGGATTTTAAAGGCGTGTGCC +
Preference number: 3 (lower is better)
Translates to: PGSPRTQKSACL*LPSAGILKACA
Trigger: GGCACACGCCTTTAAAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCGAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 72 bp TGTAGACCAGGCTCGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGTGCTGGGATTTTAAAGGCG +
Preference number: 3 (lower is better)
Translates to: CRPGSPRTQKSA*LCLPSAGILKA
Trigger: CGCCTTTAAAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCGAGCCTGGTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR TCA 72 bp CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTC +
Preference number: 3 (lower is better)
Translates to: RMVVSHHVVAGI*TLDLQKSSRVL
Trigger: GAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 72 bp GGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCCATA +
Preference number: 3 (lower is better)
Translates to: GFELWTFRRAVG*SYPLSHLTSPI
Trigger: TATGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR CCA 72 bp GCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTaGGTAAATGTAAACTGGAAGACTCCAGCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: AEVRLNQGQRPS*VNVNWKTPAGS
Trigger: GCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR CCA 72 bp CTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCG +
Preference number: 3 (lower is better)
Translates to: LVTDGCEPPCGC*DLNSGPSEEQS
Trigger: CGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 72 bp GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCAGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ
Trigger: CTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR CCA 72 bp AATCAAGGTCAAAGGCCCAGCTGGGTAAATGTAAACTaGAAGACTCCAGCAGGCAGCAGGAAGTCGAGGTCT +
Preference number: 3 (lower is better)
Translates to: NQGQRPSWVNVN*KTPAGSRKSRS
Trigger: AGACCTCGACTTCCTGCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCTTTGACCTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR CCA 72 bp AGCTTACGGCCTTCCTCGGAACTCCATGAGATCATGTaGTACACAGACATGCAGGCAAAACACTCACACACA +
Preference number: 3 (lower is better)
Translates to: SLRPSSELHEIM*YTDMQAKHSHT
Trigger: TGTGTGTGAGTGTTTTGCCTGCATGTCTGTGTACCACATGATCTCATGGAGTTCCGAGGAAGGCCGTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR GCA 72 bp CACATTGCTAAAAGGAATAGTTCCACACCTGCTACCTaGCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAG +
Preference number: 3 (lower is better)
Translates to: HIAKRNSSTPAT*LSPSLPSKEAK
Trigger: CTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGCAGGTAGCAGGTGTGGAACTATTCCTTTTAGCAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR TCA 72 bp TCCAGTCTCAAAATAAAGACTCTACTTGACCTGAGCTaGCTGGGTCTCTTCACCCACAATTCTCCACACCTT +
Preference number: 3 (lower is better)
Translates to: SSLKIKTLLDLS*LGLFTHNSPHL
Trigger: AAGGTGTGGAGAATTGTGGGTGAAGAGACCCAGTCAGCTCAGGTCAAGTAGAGTCTTTATTTTGAGACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR-3UTR CAA 90 bp TCCATGAGATCATGTGGTACACAGACATGCAGGCAAAACACTCACACACATAAAAGCACAGGATCACCCTaGAGAGCAAGACATGTTAGT +
Preference number: 3 (lower is better)
Translates to: SMRSCGTQTCRQNTHTHKSTGSP*RARHVS
Trigger: ACTAACATGTCTTGCTCTCAAGGGTGATCCTGTGCT...TTTATGTGTGTGAGTGTTTTGCCTGCATGTCTGTGTACCACATGATCTCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR TCA 72 bp GTACACAACTTCCAGTCTCAAAATAAAGACTCTACTTaGCCTGAGCTGACTGGGTCTCTTCACCCACAATTC +
Preference number: 3 (lower is better)
Translates to: VHNFQSQNKDST*PELTGSLHPQF
Trigger: GAATTGTGGGTGAAGAGACCCAGTCAGCTCAGGTCAAGTAGAGTCTTTATTTTGAGACTGGAAGTTGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR CCA 72 bp CAAGACATGTTAGTACACACCTTCTATCTTAGCACTTaGGAGATGGGAGGATCAGGAATTCAAGACCAGTTT +
Preference number: 3 (lower is better)
Translates to: QDMLVHTFYLST*EMGGSGIQDQF
Trigger: AAACTGGTCTTGAATTCCTGATCCTCCCATCTCCCAAGTGCTAAGATAGAAGGTGTGTACTAACATGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
3UTR TCA 72 bp ATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTaGGAGCAAGACATGTTAGTACACACCTTCTATCTT +
Preference number: 3 (lower is better)
Translates to: ISTLQKQAQDHP*EQDMLVHTFYL
Trigger: AAGATAGAAGGTGTGTACTAACATGTCTTGCTCTCAAGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp AGGCCCAGCTGGGTAAATGTAAACTGGAAGACTCCAGCAGGCAGCAGGAAGTCGCGGAGGCTCAGAGCCTaGCGCCCCAGGGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: RPSWVNVNWKTPAGSRKSRRLRA*RPRGPR
Trigger: CCGTGGACCCCTGGGGCGCCAGGCTCTGAGCCTCCG...CGACTTCCTGCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTCTGCCTCCCAAGTGCTGGGATTTTAAAGGCGTGTGCCACCACCGCCCAGCAGTTCAGCAGGGTGGGCTaGGGAAGAGAAGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LCLPSAGILKACATTAQQFSRVG*GREAAG
Trigger: CCCCGCTGCTTCTCTTCCCCAGCCCACCCTGCTGAA...CTGCTGGGCGGTGGTGGCACACGCCTTTAAAATCCCAGCACTTGGGAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CTGCTACCTGCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCTCCAGCTGCCGCACCTaGCGCCGGAGCTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLPACPLLSHLRKQRAEVSSCRT*RRSSWS
Trigger: GCTCCAAGAGCTCCGGCGGCAGGTGCGGCAGCTGGA...GACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGCAGGTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064495.8
CDS-3UTR GCA 90 bp TTTCTGAAACAGAGTCCCAGGATGGCCTTGACCTCCTGTCCCTCTTCCGTCTACTCCAGCTGCCGCACCTaGCGCCGGAGCTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FLKQSPRMALTSCPSSVYSSCRT*RRSSWS
Trigger: GCTCCAAGAGCTCCGGCGGCAGGTGCGGCAGCTGGA...GTAGACGGAAGAGGGACAGGAGGTCAAGGCCATCCTGGGACTCTGTTTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp TTTCTGAAACAGAGTCCCAGGATGGCCTTGACCTCCTGTCCCTCTTCCGTCTACGCCAATCCCCTGGGCTaGAGCTGGGCACAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FLKQSPRMALTSCPSSVYANPLG*SWAQRS
Trigger: GCTCCGCTGTGCCCAGCTGCAGCCCAGGGGATTGGC...GTAGACGGAAGAGGGACAGGAGGTCAAGGCCATCCTGGGACTCTGTTTCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp AAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGGTCGCGTGCGCTCCGCGTaGCCTGCATTTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KEAKGRSQAQSRSKAQLGRVRSA*PAFRSS
Trigger: GGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCG...ACCCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp TTTCTGAAACAGAGTCCCAGGATGGCCTTGACCTCCTGTCCCTCTTCCGTCTACCGCGTGCGCTCCGCGTaGCCTGCATTTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLKQSPRMALTSCPSSVYRVRSA*PAFRSS
Trigger: GGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCG...GTAGACGGAAGAGGGACAGGAGGTCAAGGCCATCCTGGGACTCTGTTTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp TCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCACGGAGGCTCAGAGCCTaGCGCCCCAGGGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: SGSSQVVHEAQEKNQEESRRLRA*RPRGPR
Trigger: CCGTGGACCCCTGGGGCGCCAGGCTCTGAGCCTCCG...TGATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTTTTCGCTCCTCCAGCTaGCGCACCTGCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: CGCWDLNSGPSEEQSGALFRSSS*RTCRRS
Trigger: GCTCCGGCGGCAGGTGCGGCAGCTGGAGGAGCGAAA...AAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCAGCTCCTCTTCCAGCTaGCGCGTGCGCTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSSSSSS*RVRSAW
Trigger: CCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCT...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCGCCAATCCCCTGGGCTaGAGCTGGGCACAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSANPLG*SWAQRS
Trigger: GCTCCGCTGTGCCCAGCTGCAGCCCAGGGGATTGGC...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATTGGGGTCCTCGGTCTTaGCCCCCTGCTCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNWGPRS*PPAPAR
Trigger: CCTTGCAGGAGCAGGGGGGCAAGACCGAGGACCCCA...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATGCATGGGCAGGAGCGTaGTCTTCCCCAGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNAWAGA*SSPARC
Trigger: GCATCGGGCTGGGGAAGAGCACGCTCCTGCCCATGC...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTGGGTCTCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCAGCGGAGCTCCTCATTaGCCTCCCTCAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGLFTHNSPHLCPKSSHPSGAPH*PPSGSP
Trigger: GGGACTCCCTGAGGGAGGCCAATGAGGAGCTCCGCT...GGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGAGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp TCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCAGGAGTGCATGGCGTGCACGGTTaGCCTCCTCCAGGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSPTILHTFVPRVPTPGVHGVHG*PPPGGA
Trigger: AGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATG...CACTCCTGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CTGGGTCTCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCTCCTGCCACTGGCCCTaGAACTCTTGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGLFTHNSPHLCPKSSHPSCHWP*NSCTCL
Trigger: CAGGCAGGTGCAAGAGTTGCAGGGCCAGTGGCAGGA...GGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGAGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp TCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCAGCCAATCCCCTGGGCTaGAGCTGGGCACAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SGSSQVVHEAQEKNQEESANPLG*SWAQRS
Trigger: GCTCCGCTGTGCCCAGCTGCAGCCCAGGGGATTGGC...TGATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTGCTACCTGCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCGTTCAGCCGTTGCTGTaGTTCCAGCCCATGGCGTGC +
Preference number: 4 (lower is better)
Translates to: LLPACPLLSHLRKQRAEVVQPLL*FQPMAC
Trigger: GCACGCCATGGGCTGGAAGCACAGCAACGGCTGAAC...GACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGCAGGTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGTCCGCCGAGCTGTGCTaGTGTCAGTGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWSAELC*CQWEAP
Trigger: TGGAGCCTCCCACTGACAGCAGCACAGCTCGGCGGA...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTGGGTCTCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCGGCAGCTGTTCAGAGTaGCCTCCAGCTGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LGLFTHNSPHLCPKSSHPGSCSE*PPAALH
Trigger: GTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCC...GGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGAGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp ATCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCCGCGTGCGCTCCGCGTaGCCTGCATTTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IRLFPGSTRGPGEESRRIRVRSA*PAFRSS
Trigger: GGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCG...GATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp ATCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCCCCCTGGGCTGCAGCTaGGCACAGCGGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IRLFPGSTRGPGEESRRIPLGCS*AQRSSS
Trigger: TGAGGAGCTCCGCTGTGCCCAGCTGCAGCCCAGGGG...GATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCCATGGCGTGCACGGTTaGCCTCCTCCAGGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSHGVHG*PPPGGA
Trigger: AGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATG...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp TGGGTCTCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCATGTGCTTCCAGCCCATaGCGTGCACGGTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WVSSPTILHTFVPRVPTPCASSP*RARLAS
Trigger: GGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACA...TGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CACACCTTCTATCTTAGCACTTGGGAGATGGGAGGATCAGGAATTCAAGACCAGAGCTCCTCTTCCAGCTaGCGCGTGCGCTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: HTFYLSTWEMGGSGIQDQSSSSS*RVRSAW
Trigger: CCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCT...CTGGTCTTGAATTCCTGATCCTCCCATCTCCCAAGTGCTAAGATAGAAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGTCCTGCCACTGGCCCTaGAACTCTTGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWSCHWP*NSCTCL
Trigger: CAGGCAGGTGCAAGAGTTGCAGGGCCAGTGGCAGGA...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGTCCTCCAGGTGGCGCTaGAGTTCCTCCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQSSRWR*SSSCRS
Trigger: GGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGA...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCAGGAGTGGTTCAGCCGTTGCTGTaGTTCCAGCCCATGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SSPTILHTFVPRVPTPGVVQPLL*FQPMAC
Trigger: GCACGCCATGGGCTGGAAGCACAGCAACGGCTGAAC...CACTCCTGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CTGCTACCTGCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCTGCTGGTTCAGCCGTTaGTGTGCTTCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LLPACPLLSHLRKQRAEVCWFSR*CASSPW
Trigger: CCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCA...GACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGCAGGTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCAGGAGTGCTCAGCTCCGACAGCTaGTGCTGGTTCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SSPTILHTFVPRVPTPGVLSSDS*CWFSRC
Trigger: GCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAG...CACTCCTGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATTGTAGCTCTTCCACCTaGGCCCTCAGCTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNCSSST*ALSSDS
Trigger: GCTGTCGGAGCTGAGGGCGCAGGTGGAAGAGCTACA...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TCCTGTCCCTCTTCCGTCTACCTCCTGAGTGCTGGAATCACAGTCCCATATGAGTGTAGCTCTTCCACCTaGGCCCTCAGCTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: SCPSSVYLLSAGITVPYECSSST*ALSSDS
Trigger: GCTGTCGGAGCTGAGGGCGCAGGTGGAAGAGCTACA...CTCATATGGGACTGTGATTCCAGCACTCAGGAGGTAGACGGAAGAGGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp TCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCAGGAGTGGCCTCTTCCTGCCACTaGCCCTGCAACTCTTGCACC +
Preference number: 4 (lower is better)
Translates to: SSPTILHTFVPRVPTPGVASSCH*PCNSCT
Trigger: GGTGCAAGAGTTGCAGGGCCAGTGGCAGGAAGAGGC...CACTCCTGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCAGCGGAGCTCCTCATTaGCCTCCCTCAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSSGAPH*PPSGSP
Trigger: GGGACTCCCTGAGGGAGGCCAATGAGGAGCTCCGCT...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTGCTACCTGCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCTCCGACAGCTGCTGCTaGTTCAGCCGTTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLPACPLLSHLRKQRAEVSDSCC*FSRCCA
Trigger: AGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGA...GACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGCAGGTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGGTCTGGGGACACCACAGTaGGTGGCCTCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: KEAKGRSQAQSRSKAQLGLGTPQ*VASAWV
Trigger: AACCCAAGCAGAGGCCACCCACTGTGGTGTCCCCAG...ACCCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp AAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGGTACGTCTGCAACCAGGTaGGCAGAGACCCGCATAGCT +
Preference number: 4 (lower is better)
Translates to: KEAKGRSQAQSRSKAQLGTSATR*AETRIA
Trigger: AGCTATGCGGGTCTCTGCTCACCTGGTTGCAGACGT...ACCCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp AAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGGTTGGGAGATGCTGATCTaGCACAGGGTGCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KEAKGRSQAQSRSKAQLGWEMLI*HRVPQN
Trigger: GTTCTGGGGCACCCTGTGTCAGATCAGCATCTCCCA...ACCCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGGTCGTCTCTCTGAGCTCTaGAGGCAGGATCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KEAKGRSQAQSRSKAQLGRLSEL*RQDLCC
Trigger: GCAGCAGAGATCCTGCCTGCAGAGCTCAGAGAGACG...ACCCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTCAGCTCCGACAGCTaGTGCTGGTTCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQLSSDS*CWFSRC
Trigger: GCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAG...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAATGGGGTCCTCGGTCTTaGCCCCCTGCTCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQWGPRS*PPAPAR
Trigger: CCTTGCAGGAGCAGGGGGGCAAGACCGAGGACCCCA...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGGCCCAGCTGGGTAAATGTAAACTGGAAGACTCCAGCAGGCAGCAGGAAGTCGCATGGCCCGCAGGTCTaGATCCTTCTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: RPSWVNVNWKTPAGSRKSHGPQV*ILLLQT
Trigger: AGTCTGCAGAAGAAGGATGCAGACCTGCGGGCCATG...CGACTTCCTGCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGTCAGCACATGGGCTATaGCGAGTCCGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWSAHGL*RVRCSG
Trigger: ACCTGAGCAGCGGACTCGCCATAGCCCATGTGCTGA...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp GGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTCAGCACATGGGCTATaGCGAGTCCGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSQISLRMVVSHHVVAGISAHGL*RVRCSG
Trigger: ACCTGAGCAGCGGACTCGCCATAGCCCATGTGCTGA...AATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp AAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGGTAGTGCTTGTGCCTCCTaGGATAGGCTGGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEAKGRSQAQSRSKAQLGSACAS*DRLVSA
Trigger: GGCACTGACCAGCCTATCCCAGGAGGCACAAGCACT...ACCCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp TCCTGTCCCTCTTCCGTCTACCTCCTGAGTGCTGGAATCACAGTCCCATATGAGAGTGCTTGTGCCTCCTaGGATAGGCTGGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SCPSSVYLLSAGITVPYESACAS*DRLVSA
Trigger: GGCACTGACCAGCCTATCCCAGGAGGCACAAGCACT...CTCATATGGGACTGTGATTCCAGCACTCAGGAGGTAGACGGAAGAGGGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGGGCAGCTGTTCAGAGTaGCCTCCAGCTGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQGSCSE*PPAALH
Trigger: GTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCC...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064495.8
CDS-3UTR CCA 90 bp TCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCATGTGCTTCCAGCCCATaGCGTGCACGGTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGSSQVVHEAQEKNQEESCASSP*RARLAS
Trigger: GGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACA...TGATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTGCTACCTGCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCCTGTGCTGCTGTCAGTaGGAGGCTCCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LLPACPLLSHLRKQRAEVLCCCQ*EAPTPQ
Trigger: TTGAGGAGTTGGAGCCTCCCACTGACAGCAGCACAG...GACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGCAGGTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGAAGAAGGACTGGGCATaGGCAGGAGCGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWKKDWA*AGACSS
Trigger: GGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTT...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGACATCTGGGAGATGCTaGTCTGACACAGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQTSGRC*SDTGCP
Trigger: GGGGCACCCTGTGTCAGATCAGCATCTCCCAGATGT...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp AGGCCCAGCTGGGTAAATGTAAACTGGAAGACTCCAGCAGGCAGCAGGAAGTCGATTCTGCTTCTCCTCTaGAAGGAGCAAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RPSWVNVNWKTPAGSRKSILLLL*KEQELA
Trigger: CGCCAGCTCTTGCTCCTTTCAGAGGAGAAGCAGAAT...CGACTTCCTGCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp AGGCCCAGCTGGGTAAATGTAAACTGGAAGACTCCAGCAGGCAGCAGGAAGTCGTGCAGCTTCTGCAGATaGTCCTCCAGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RPSWVNVNWKTPAGSRKSCSFCR*SSSFLF
Trigger: GAAGAGGAAGCTGGAGGATCATCTGCAGAAGCTGCA...CGACTTCCTGCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp ATCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCGTTCAGCCGTTGCTGTaGTTCCAGCCCATGGCGTGC +
Preference number: 4 (lower is better)
Translates to: IRLFPGSTRGPGEESRRIVQPLL*FQPMAC
Trigger: GCACGCCATGGGCTGGAAGCACAGCAACGGCTGAAC...GATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp ATCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCCTCAGCTCCGACAGCTaGTGCTGGTTCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: IRLFPGSTRGPGEESRRILSSDS*CWFSRC
Trigger: GCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAG...GATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp ATCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCTGTAGCTCTTCCACCTaGGCCCTCAGCTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: IRLFPGSTRGPGEESRRICSSST*ALSSDS
Trigger: GCTGTCGGAGCTGAGGGCGCAGGTGGAAGAGCTACA...GATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCCTCCTGGGATAGGCTaGTCAGTGCCTGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQPPGIG*SVPGSV
Trigger: AACGGAACCAGGCACTGACCAGCCTATCCCAGGAGG...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp TCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCATTGGCCTCCTCCAGGTaGCGCTGCAGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGSSQVVHEAQEKNQEESLASSR*RCSSSC
Trigger: ACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAA...TGATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAATCCTCTTCAGCAGGGTaGGGTCCTCGGTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQSSSAG*GPRSCP
Trigger: GGGGCAAGACCGAGGACCCCACCCTGCTGAAGAGGA...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR CAA 72 bp ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TDGCEPPCGCWD*NSGPSEEQSGA
Trigger: AGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR TCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGTCTTCTCCAGTTTCCTaGCCTTCAACCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWSSPVS*PSTSSW
Trigger: CCAGCTGGAGGTTGAAGGTCAGGAAACTGGAGAAGA...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGTGCAGCTTCTGCAGATaGTCCTCCAGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWCSFCR*SSSFLF
Trigger: GAAGAGGAAGCTGGAGGATCATCTGCAGAAGCTGCA...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATGGCAGCGTTCTCTTGTaGCAGATTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNGSVLL*QILLLL
Trigger: GAGGAGAAGCAGAATCTGGCACAAGAGAACGCTGCC...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGAGTGGCCTCCAGCTaGCTTGCACGTTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQRVASS*LARSED
Trigger: GTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCT...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064495.8
CDS-3UTR GCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCAGCTCCTCTTCCAGCTaGCGCGTGCGCTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSSSSSS*RVRSAW
Trigger: CCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCT...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGGCATGGGCAGGAGCGTaGTCTTCCCCAGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLEAWAGA*SSPARC
Trigger: GCATCGGGCTGGGGAAGAGCACGCTCCTGCCCATGC...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTATGGAATTCTaGGGACACCACAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNQGMEF*GHHSGW
Trigger: CCACCCACTGTGGTGTCCCCAGAATTCCATACCTTG...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAATGTGCCAAGAAGGACTaGGCATGGGCAGGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQCAKKD*AWAGAC
Trigger: GCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACA...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp ATCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCCCGCTCCCAGAGCTGTaGCCTCAAGGTATGGAATTC +
Preference number: 4 (lower is better)
Translates to: IRLFPGSTRGPGEESRRIPLPEL*PQGMEF
Trigger: GAATTCCATACCTTGAGGTCACAGCTCTGGGAGCGG...GATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TCCTGTCCCTCTTCCGTCTACCTCCTGAGTGCTGGAATCACAGTCCCATATGAGGAAACTTGGAACGTCTaGAACCAGGTGAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SCPSSVYLLSAGITVPYEETWNV*NQVSRD
Trigger: GTCTCTGCTCACCTGGTTGCAGACGTTCCAAGTTTC...CTCATATGGGACTGTGATTCCAGCACTCAGGAGGTAGACGGAAGAGGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATTTTCGCTCCTCCAGCTaGCGCACCTGCCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LCPQCSFYSSSLCLEYIHFRSSS*RTCRRS
Trigger: GCTCCGGCGGCAGGTGCGGCAGCTGGAGGAGCGAAA...ATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064495.8
CDS-3UTR CCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGTGCTTGTGCCTCCTaGGATAGGCTGGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQSACAS*DRLVSA
Trigger: GGCACTGACCAGCCTATCCCAGGAGGCACAAGCACT...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGAGCGGAGCTCCTCATTaGCCTCCCTCAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLESGAPH*PPSGSP
Trigger: GGGACTCCCTGAGGGAGGCCAATGAGGAGCTCCGCT...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCCCTGGGCTGCAGCTaGGCACAGCGGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RPRRRIKKNHIAKRNSSTPLGCS*AQRSSS
Trigger: TGAGGAGCTCCGCTGTGCCCAGCTGCAGCCCAGGGG...TGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTTGAGAACTCGCCAATaGGGCTCACATCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSLRTRQ*GSHLGD
Trigger: ATCTCCCAGATGTGAGCCTCATTGGCGAGTTCTCAA...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp TGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTTTGAGAACTCGCCAATaGGGCTCACATCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: CGCWDLNSGPSEEQSGALLRTRQ*GSHLGD
Trigger: ATCTCCCAGATGTGAGCCTCATTGGCGAGTTCTCAA...AAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR TCA 90 bp TCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCACTCTTGTTCTCCAGCTaGAGTCGCACTAGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SGSSQVVHEAQEKNQEESLLFSS*SRTSVS
Trigger: AGAGACGCTAGTGCGACTTCAGCTGGAGAACAAGAG...TGATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGGAAACTTGGAACGTCTaGAACCAGGTGAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQETWNV*NQVSRD
Trigger: GTCTCTGCTCACCTGGTTGCAGACGTTCCAAGTTTC...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTCCTGCCACTGGCCCTaGAACTCTTGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLESCHWP*NSCTCL
Trigger: CAGGCAGGTGCAAGAGTTGCAGGGCCAGTGGCAGGA...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATTATTCTCGTTTCCTCTaGAACTCCAGGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNYSRFL*NSRSAS
Trigger: TGAGGCTGACCTGGAGTTGCAGAGGAAACGAGAATA...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAACCTTCAACCTCCAGCTaGGGCTTGAGTCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQPSTSS*GLSPLR
Trigger: TCTCAGAGGACTCAAGCCCCAGCTGGAGGTTGAAGG...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AACACTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTCCCCTGGGCTGCAGCTaGGCACAGCGGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NTHTHKISTLQKQAQDHPPLGCS*AQRSSS
Trigger: TGAGGAGCTCCGCTGTGCCCAGCTGCAGCCCAGGGG...AGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACTCCTCTTCAGCAGGGTaGGGTCCTCGGTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPGEESRRITLLKGIVPHSSSAG*GPRSCP
Trigger: GGGGCAAGACCGAGGACCCCACCCTGCTGAAGAGGA...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAATCTTCTCCAGTTTCCTaGCCTTCAACCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQSSPVS*PSTSSW
Trigger: CCAGCTGGAGGTTGAAGGTCAGGAAACTGGAGAAGA...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp CACACCTTCTATCTTAGCACTTGGGAGATGGGAGGATCAGGAATTCAAGACCAGCCCGTAATTCTCTGGTaGCAGGGAATCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: HTFYLSTWEMGGSGIQDQPVILW*QGIRSV
Trigger: GACACTCCTGATTCCCTGTCACCAGAGAATTACGGG...CTGGTCTTGAATTCCTGATCCTCCCATCTCCCAAGTGCTAAGATAGAAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp TCCATGAGATCATGTGGTACACAGACATGCAGGCAAAACACTCACACACATAAAAGAGTGGCCTCCAGCTaGCTTGCACGTTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SMRSCGTQTCRQNTHTHKRVASS*LARSED
Trigger: GTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCT...TTTATGTGTGTGAGTGTTTTGCCTGCATGTCTGTGTACCACATGATCTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp TCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCATTTTCCTCCTGTTCCTaGCGTCTCCGACTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SGSSQVVHEAQEKNQEESFSSCS*RLRLFS
Trigger: TGAGAAGAGTCGGAGACGGCAGGAACAGGAGGAAAA...TGATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTGAGTCACGTCCTCGGTCTTaGCCCCCTGCTCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LTHIKSVHFKNKHRITLESRPRS*PPAPAR
Trigger: CCTTGCAGGAGCAGGGGGGCAAGACCGAGGACGTGA...CTCAAGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTTGGTCATGAGCTCCTaGATGGCTTCCATCACTACA +
Preference number: 4 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSLVMSS*MASITT
Trigger: TGTAGTGATGGAAGCCATCCAGGAGCTCATGACCAA...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACGCCTCTTCCTGCCACTaGCCCTGCAACTCTTGCACC +
Preference number: 4 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYASSCH*PCNSCT
Trigger: GGTGCAAGAGTTGCAGGGCCAGTGGCAGGAAGAGGC...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCTCCGCGGCCTCCTGCTaGCACAGTCTCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSSAASC*HSLLFS
Trigger: GGAGAACAAGAGACTGTGCCAGCAGGAGGCCGCGGA...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACTTGGCCTCCTCCAGGTaGCGCTGCAGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYLASSR*RCSSSC
Trigger: ACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAA...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATTGTGCTTCCAGCCCATaGCGTGCACGGTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCPQCSFYSSSLCLEYIHCASSP*RARLAS
Trigger: GGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACA...ATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCGGACACCACAGTGGGTaGCCTCTGCTTGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSGHHSG*PLLGFQ
Trigger: CTGGAACCCAAGCAGAGGCCACCCACTGTGGTGTCC...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACGGACACCACAGTGGGTaGCCTCTGCTTGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYGHHSG*PLLGFQ
Trigger: CTGGAACCCAAGCAGAGGCCACCCACTGTGGTGTCC...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACCTGGGGACACCACAGTaGGTGGCCTCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYLGTPQ*VASAWV
Trigger: AACCCAAGCAGAGGCCACCCACTGTGGTGTCCCCAG...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACTGTGCCAAGAAGGACTaGGCATGGGCAGGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYCAKKD*AWAGAC
Trigger: GCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACA...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACGTCTGCAACCAGGTaGGCAGAGACCCGCATAGCT +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSTSATR*AETRIA
Trigger: AGCTATGCGGGTCTCTGCTCACCTGGTTGCAGACGT...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAATTGAGAACTCGCCAATaGGGCTCACATCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQLRTRQ*GSHLGD
Trigger: ATCTCCCAGATGTGAGCCTCATTGGCGAGTTCTCAA...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TCCATGAGATCATGTGGTACACAGACATGCAGGCAAAACACTCACACACATAAACGTCTCTCTGAGCTCTaGAGGCAGGATCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SMRSCGTQTCRQNTHTHKRLSEL*RQDLCC
Trigger: GCAGCAGAGATCCTGCCTGCAGAGCTCAGAGAGACG...TTTATGTGTGTGAGTGTTTTGCCTGCATGTCTGTGTACCACATGATCTCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp GGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTGCTATCCTCCAGGTGGCGCTaGAGTTCCTCCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GEESRRITLLKGIVPHLLSSRWR*SSSCRS
Trigger: GGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGA...TAGCAGGTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AACACTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTCCTCCAGGTGGCGCTaGAGTTCCTCCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: NTHTHKISTLQKQAQDHPSSRWR*SSSCRS
Trigger: GGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGA...AGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACTGCTGGTTCAGCCGTTaGTGTGCTTCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GPGEESRRITLLKGIVPHCWFSR*CASSPW
Trigger: CCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCA...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTGCTATCCGCCGAGCTGTGCTaGTGTCAGTGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GEESRRITLLKGIVPHLLSAELC*CQWEAP
Trigger: TGGAGCCTCCCACTGACAGCAGCACAGCTCGGCGGA...TAGCAGGTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAATCTGCATCCTTCTTCTaGAGACTGTCCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQSASFF*RLSCSS
Trigger: GGAGCTACAGGACAGTCTGCAGAAGAAGGATGCAGA...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGCATGGCCCGCAGGTCTaGATCCTTCTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLEHGPQV*ILLLQT
Trigger: AGTCTGCAGAAGAAGGATGCAGACCTGCGGGCCATG...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCTCAGCACATGGGCTATaGCGAGTCCGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSSAHGL*RVRCSG
Trigger: ACCTGAGCAGCGGACTCGCCATAGCCCATGTGCTGA...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATGCCTCTTCCTGCCACTaGCCCTGCAACTCTTGCACC +
Preference number: 4 (lower is better)
Translates to: LCPQCSFYSSSLCLEYIHASSCH*PCNSCT
Trigger: GGTGCAAGAGTTGCAGGGCCAGTGGCAGGAAGAGGC...ATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATCCGCGGCCTCCTGCTaGCACAGTCTCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSSAASC*HSLLFS
Trigger: GGAGAACAAGAGACTGTGCCAGCAGGAGGCCGCGGA...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTGAGTTGGCCTCCTCCAGGTaGCGCTGCAGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LTHIKSVHFKNKHRITLELASSR*RCSSSC
Trigger: ACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAA...CTCAAGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp ACAGTCCCATATGAGCATCCTCTTTTTCTAAATAAGATTCTGAGCCAGACCCAGTCCGACAGCTGCTGCTaGTTCAGCCGTTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TVPYEHPLFLNKILSQTQSDSCC*FSRCCA
Trigger: AGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGA...CTGGGTCTGGCTCAGAATCTTATTTAGAAAAAGAGGATGCTCATATGGGACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGCTGTGCTGCTGTCAGTaGGAGGCTCCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLELCCCQ*EAPTPQ
Trigger: TTGAGGAGTTGGAGCCTCCCACTGACAGCAGCACAG...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCAAGAAGGACTGGGCATaGGCAGGAGCGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSKKDWA*AGACSS
Trigger: GGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTT...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCGTCCACGGCGAGCATTaGTGGCCAGTCTTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSVHGEH*WPVFAV
Trigger: CACAGCAAAGACTGGCCACCAATGCTCGCCGTGGAC...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp ACAGTCCCATATGAGCATCCTCTTTTTCTAAATAAGATTCTGAGCCAGACCCAGAGAAAGGGGGATTACTaGGGAGCACAAGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TVPYEHPLFLNKILSQTQRKGDY*GAQGRA
Trigger: GGCCCTCCCTTGTGCTCCCCAGTAATCCCCCTTTCT...CTGGGTCTGGCTCAGAATCTTATTTAGAAAAAGAGGATGCTCATATGGGACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR TCA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATGGGAGATGCTGATCTaGCACAGGGTGCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSWEMLI*HRVPQN
Trigger: GTTCTGGGGCACCCTGTGTCAGATCAGCATCTCCCA...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCCCGCTCCCAGAGCTGTaGCCTCAAGGTATGGAATTC +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSPLPEL*PQGMEF
Trigger: GAATTCCATACCTTGAGGTCACAGCTCTGGGAGCGG...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGTCAGGAAATAGTACCTaGGGGACTGTGTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWSGNST*GTVYQN
Trigger: ATTTTGATACACAGTCCCGCAGGTACTATTTCCTGA...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTCAGGAAATAGTACCTaGGGGACTGTGTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: GSQISLRMVVSHHVVAGISGNST*GTVYQN
Trigger: ATTTTGATACACAGTCCCGCAGGTACTATTTCCTGA...AATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CACACCTTCTATCTTAGCACTTGGGAGATGGGAGGATCAGGAATTCAAGACCAGTCTTGTGCCAGATTCTaGTTCTCCTCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: HTFYLSTWEMGGSGIQDQSCARF*FSSERS
Trigger: GCTCCTTTCAGAGGAGAAGCAGAATCTGGCACAAGA...CTGGTCTTGAATTCCTGATCCTCCCATCTCCCAAGTGCTAAGATAGAAGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGGTGTTCTAGCTGTGACTaGAGAAGCAATAGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LRKQRAEVRLNQGQRPSWCSSCD*RSNSFL
Trigger: TAAGAAGCTATTGCTTCTGCAGTCACAGCTAGAACA...CCAGCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATTGTTCTAGCTGTGACTaGAGAAGCAATAGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNCSSCD*RSNSFL
Trigger: TAAGAAGCTATTGCTTCTGCAGTCACAGCTAGAACA...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCACGTCTCTCTGAGCTCTaGAGGCAGGATCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSRLSEL*RQDLCC
Trigger: GCAGCAGAGATCCTGCCTGCAGAGCTCAGAGAGACG...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp CTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTGAGCCTCCTGGGATAGGCTaGTCAGTGCCTGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: LTHIKSVHFKNKHRITLEPPGIG*SVPGSV
Trigger: AACGGAACCAGGCACTGACCAGCCTATCCCAGGAGG...CTCAAGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp CTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATTCCGACAGCTGCTGCTaGTTCAGCCGTTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LCPQCSFYSSSLCLEYIHSDSCC*FSRCCA
Trigger: AGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGA...ATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACAGTCCACGGCGAGCATTaGTGGCCAGTCTTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPRRRIKKNHIAKRNSSTVHGEH*WPVFAV
Trigger: CACAGCAAAGACTGGCCACCAATGCTCGCCGTGGAC...TGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp AACACTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTACGTCTGCAACCAGGTaGGCAGAGACCCGCATAGCT +
Preference number: 4 (lower is better)
Translates to: NTHTHKISTLQKQAQDHPTSATR*AETRIA
Trigger: AGCTATGCGGGTCTCTGCTCACCTGGTTGCAGACGT...AGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR TCA 90 bp GGAATTCAAGACCAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTTGGGAGATGCTGATCTaGCACAGGGTGCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GIQDQFQVHNFQSQNKDSWEMLI*HRVPQN
Trigger: GTTCTGGGGCACCCTGTGTCAGATCAGCATCTCCCA...AGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTGGTCTTGAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp AACACTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTGCTGGTTCAGCCGTTaGTGTGCTTCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: NTHTHKISTLQKQAQDHPCWFSR*CASSPW
Trigger: CCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCA...AGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTCTGCATCCTTCTTCTaGAGACTGTCCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLESASFF*RLSCSS
Trigger: GGAGCTACAGGACAGTCTGCAGAAGAAGGATGCAGA...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTTCAACCTCCAGCTaGGGCTTGAGTCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RPRRRIKKNHIAKRNSSTPSTSS*GLSPLR
Trigger: TCTCAGAGGACTCAAGCCCCAGCTGGAGGTTGAAGG...TGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp GGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTGCTACCTCCTGGGATAGGCTaGTCAGTGCCTGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: GEESRRITLLKGIVPHLLPPGIG*SVPGSV
Trigger: AACGGAACCAGGCACTGACCAGCCTATCCCAGGAGG...TAGCAGGTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp TTCAAGACCAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTACTTTCCGCGGCCTCCTGCTaGCACAGTCTCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FKTSFRYTTSSLKIKTLLSAASC*HSLLFS
Trigger: GGAGAACAAGAGACTGTGCCAGCAGGAGGCCGCGGA...AAGTAGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTGGTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCAAGGTATGGAATTCTaGGGACACCACAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGEESRRITLLKGIVPHQGMEF*GHHSGW
Trigger: CCACCCACTGTGGTGTCCCCAGAATTCCATACCTTG...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCACCCGTAATTCTCTGGTaGCAGGGAATCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSPVILW*QGIRSV
Trigger: GACACTCCTGATTCCCTGTCACCAGAGAATTACGGG...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCAATTCTGCTTCTCCTCTaGAAGGAGCAAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSILLLL*KEQELA
Trigger: CGCCAGCTCTTGCTCCTTTCAGAGGAGAAGCAGAAT...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCACTCTTGTTCTCCAGCTaGAGTCGCACTAGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSLLFSS*SRTSVS
Trigger: AGAGACGCTAGTGCGACTTCAGCTGGAGAACAAGAG...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp GGAATTCAAGACCAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTGACGGGGACAAGGTCTaGGAAGCTGTGCAGGTAACA +
Preference number: 4 (lower is better)
Translates to: GIQDQFQVHNFQSQNKDSDGDKV*EAVQVT
Trigger: TGTTACCTGCACAGCTTCTCAGACCTTGTCCCCGTC...AGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTGGTCTTGAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCGAAACTTGGAACGTCTaGAACCAGGTGAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSETWNV*NQVSRD
Trigger: GTCTCTGCTCACCTGGTTGCAGACGTTCCAAGTTTC...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTCTTGTGCCAGATTCTaGTTCTCCTCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLESCARF*FSSERS
Trigger: GCTCCTTTCAGAGGAGAAGCAGAATCTGGCACAAGA...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACAGGCAGCGTTCTCTTGTaGCAGATTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPRRRIKKNHIAKRNSSTGSVLL*QILLLL
Trigger: GAGGAGAAGCAGAATCTGGCACAAGAGAACGCTGCC...TGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACATTGGTGGCCAGTCTTTaGTGTGCCAAGAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: RPRRRIKKNHIAKRNSSTLVASL*CAKKDW
Trigger: CCAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAA...TGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATTGGTGGCCAGTCTTTaGTGTGCCAAGAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSLVASL*CAKKDW
Trigger: CCAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAA...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp CACTTTGTAGACCAGGCTGGCCTCAAACTCAGATATATATATAGATATAGATATACATCTGGGAGATGCTaGTCTGACACAGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HFVDQAGLKLRYIYRYRYTSGRC*SDTGCP
Trigger: GGGGCACCCTGTGTCAGATCAGCATCTCCCAGATGT...ATATCTATATCTATATATATATCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR TCA 90 bp GGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTGCTACCCGTAATTCTCTGGTaGCAGGGAATCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GEESRRITLLKGIVPHLLPVILW*QGIRSV
Trigger: GACACTCCTGATTCCCTGTCACCAGAGAATTACGGG...TAGCAGGTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGCCAACTGAAGCAGTTTaGCAAGTTCTGCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLEPTEAV*QVLQDL
Trigger: CAAATCCTGCAGAACTTGGCAAACTGCTTCAGTTGG...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp GGAATTCAAGACCAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTGGCAGCGTTCTCTTGTaGCAGATTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GIQDQFQVHNFQSQNKDSGSVLL*QILLLL
Trigger: GAGGAGAAGCAGAATCTGGCACAAGAGAACGCTGCC...AGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTGGTCTTGAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp CACACCTTCTATCTTAGCACTTGGGAGATGGGAGGATCAGGAATTCAAGACCAGTGTTCTAGCTGTGACTaGAGAAGCAATAGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: HTFYLSTWEMGGSGIQDQCSSCD*RSNSFL
Trigger: TAAGAAGCTATTGCTTCTGCAGTCACAGCTAGAACA...CTGGTCTTGAATTCCTGATCCTCCCATCTCCCAAGTGCTAAGATAGAAGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CCA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACTTGGTCATGAGCTCCTaGATGGCTTCCATCACTACA +
Preference number: 4 (lower is better)
Translates to: GPGEESRRITLLKGIVPHLVMSS*MASITT
Trigger: TGTAGTGATGGAAGCCATCCAGGAGCTCATGACCAA...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR TCA 90 bp TTCAAGACCAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTACTTATTCTGCTTCTCCTCTaGAAGGAGCAAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FKTSFRYTTSSLKIKTLLILLLL*KEQELA
Trigger: CGCCAGCTCTTGCTCCTTTCAGAGGAGAAGCAGAAT...AAGTAGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTGGTCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR TCA 90 bp TTCAAGACCAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTACTTCTCTTGTTCTCCAGCTaGAGTCGCACTAGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: FKTSFRYTTSSLKIKTLLLLFSS*SRTSVS
Trigger: AGAGACGCTAGTGCGACTTCAGCTGGAGAACAAGAG...AAGTAGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTGGTCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp AGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACATCTTGTGCCAGATTCTaGTTCTCCTCTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RPRRRIKKNHIAKRNSSTSCARF*FSSERS
Trigger: GCTCCTTTCAGAGGAGAAGCAGAATCTGGCACAAGA...TGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR GCA 90 bp CTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATCCAACTGAAGCAGTTTaGCAAGTTCTGCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: LCPQCSFYSSSLCLEYIHPTEAV*QVLQDL
Trigger: CAAATCCTGCAGAACTTGGCAAACTGCTTCAGTTGG...ATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CCA 90 bp AACACTCACACACATAAAATCAGTACACTTCAAAAACAAGCACAGGATCACCCTTTGGTCATGAGCTCCTaGATGGCTTCCATCACTACA +
Preference number: 4 (lower is better)
Translates to: NTHTHKISTLQKQAQDHPLVMSS*MASITT
Trigger: TGTAGTGATGGAAGCCATCCAGGAGCTCATGACCAA...AGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATTTTATGTGTGTGAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR GCA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACTCAGGAAATAGTACCTaGGGGACTGTGTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: GPGEESRRITLLKGIVPHSGNST*GTVYQN
Trigger: ATTTTGATACACAGTCCCGCAGGTACTATTTCCTGA...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR CAA 72 bp GGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATaGTGTCTAGAGTACATTCATGACAGATTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: GLCPQCSFYSSS*CLEYIHDRFKV
Trigger: GACTTTAAATCTGTCATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
3UTR CAA 72 bp AATCAGTACACTTCAAAAACAAGCACAGGATCACCCTaGAGAGCAAGACATGTTAGTACACACCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: NQYTSKTSTGSP*RARHVSTHLLS
Trigger: AGATAGAAGGTGTGTACTAACATGTCTTGCTCTCAAGGGTGATCCTGTGCTTGTTTTTGAAGTGTACTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS GCA 90 bp GTGCGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTGCCGCACCTaGCGCCGGAGCTCTTGGAGCTCGCCCAGGCGACGACGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VRSAWPAFRSSSCRT*RRSSWSSPRRRRQL
Trigger: CAGCTGCCGTCGTCGCCTGGGCGAGCTCCAAGAGCTCCGGCGGCAGGTGCGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 90 bp AGCTGCCGCGTGCGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTaGCGCACCTGCCGCCGGAGCTCTTGGAGCTCGCCCAGGCGACGA +
Preference number: 5 (lower is better)
Translates to: SCRVRSAWPAFRSSS*RTCRRSSWSSPRRR
Trigger: TCGTCGCCTGGGCGAGCTCCAAGAGCTCCGGCGGCAGGTGCGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 90 bp TTGCACCTGCCTGCGCTGAGCCTCGAGCTGGGCACGCAGGGATCCTaGACGGCGCAGCTCCTCTTCCAGCTGCCGCGTGCGCTCCGCGTG +
Preference number: 5 (lower is better)
Translates to: LHLPALSLELGTQGS*TAQLLFQLPRALRV
Trigger: CACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGTGCAGGATCCCTGCGTGCCCAGCTCGAGGCTCAGCGCAGGCAGGTGCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp GCTTCCAGCCCATGGCGTGCACGGTTGGCCTCCTCCAGGTGGCGCTaGAGTTCCTCCTGTCGCTCCCGGTCCGCGGCCTCCTGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: ASSPWRARLASSRWR*SSSCRSRSAASCWH
Trigger: GTGCCAGCAGGAGGCCGCGGACCGGGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp CACGCAGGGATCCTGCACGGCGCAGCTCCTCTTCCAGCTGCCGCGTaGGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTGCCGCACCT +
Preference number: 5 (lower is better)
Translates to: HAGILHGAAPLPAAA*APRGLHFAPPAAAP
Trigger: AGGTGCGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGTGCAGGATCCCTGCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 90 bp AGCTGGGCACGCAGGGATCCTGCACGGCGCAGCTCCTCTTCCAGCTaGCGCGTGCGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SWARRDPARRSSSSS*RVRSAWPAFRSSSC
Trigger: GCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGTGCAGGATCCCTGCGTGCCCAGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 90 bp TGCTGTGCTTCCAGCCCATGGCGTGCACGGTTGGCCTCCTCCAGGTaGCGCTGCAGTTCCTCCTGTCGCTCCCGGTCCGCGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CCASSPWRARLASSR*RCSSSCRSRSAASC
Trigger: GCAGGAGGCCGCGGACCGGGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 90 bp GCCTCTTCCTGCCACTGGCCCTGCAACTCTTGCACCTGCCTGCGCTaGGCCTCGAGCTGGGCACGCAGGGATCCTGCACGGCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ASSCHWPCNSCTCLR*ASSWARRDPARRSS
Trigger: GGAGCTGCGCCGTGCAGGATCCCTGCGTGCCCAGCTCGAGGCTCAGCGCAGGCAGGTGCAAGAGTTGCAGGGCCAGTGGCAGGAAGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp ACGGCGCAGCTCCTCTTCCAGCTGCCGCGTGCGCTCCGCGTGGCCTaGATTTCGCTCCTCCAGCTGCCTTGCACGTTCGGAGGACTGCCG +
Preference number: 5 (lower is better)
Translates to: TAQLLFQLPRALRVA*ISLLQLPCTFGGLP
Trigger: CGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS GCA 90 bp CACGCAGGGATCCTGCACGGCGCAGCTCCTCTTCCAGCTGCCGCGTaGGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTGCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: HAGILHGAAPLPAAA*APRGLHFAPPAALH
Trigger: GTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGTGCAGGATCCCTGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS CCA 90 bp CCTGCACGGCGCAGCTCCTCTTCCAGCTGCCGCGTGCGCTCCGCGTaGCCTGCATTTCGCTCCTCCAGCTGCCTTGCACGTTCGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PARRSSSSSCRVRSA*PAFRSSSCLARSED
Trigger: GTCCTCCGAACGTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGTGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS GCA 90 bp TCCACCTGCGCCCTCAGCTCCGACAGCTGCTGCTGGTTCAGCCGTTaGTGTGCTTCCAGCCCATGGCGTGCACGGTTGGCCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: STCALSSDSCCWFSR*CASSPWRARLASSR
Trigger: CCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAGGGCGCAGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp GCCTGGCGCCCCAGGGGTCCACGGCGAGCATTGGTGGCCAGTCTTTaGTGTGCCAAGAAGGACTGGGCATGGGCAGGAGCGTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: AWRPRGPRRALVASL*CAKKDWAWAGACSS
Trigger: GGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAATGCTCGCCGTGGACCCCTGGGGCGCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CCA 90 bp GCTGGTTCAGCCGTTGCTGTGCTTCCAGCCCATGGCGTGCACGGTTaGCCTCCTCCAGGTGGCGCTGCAGTTCCTCCTGTCGCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: AGSAVAVLPAHGVHG*PPPGGAAVPPVAPG
Trigger: ACCGGGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp AGCTGCCGCGTGCGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTaGCTTGCACGTTCGGAGGACTGCCGCAGCTCATCCATCTCATCC +
Preference number: 5 (lower is better)
Translates to: SCRVRSAWPAFRSSS*LARSEDCRSSSISS
Trigger: GGATGAGATGGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS CCA 90 bp GGAGCTCTTGGAGCTCGCCCAGGCGACGACGGCAGCTGTTCAGAGTaGCCTCCAGCTGCCTTGCACGTTCGGAGGACTGCCGCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: GALGARPGDDGSCSE*PPAALHVRRTAAAH
Trigger: ATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCCGTCGTCGCCTGGGCGAGCTCCAAGAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 90 bp AGCTCGCCCAGGCGACGACGGCAGCTGTTCAGAGTGGCCTCCAGCTaGCTTGCACGTTCGGAGGACTGCCGCAGCTCATCCATCTCATCC +
Preference number: 5 (lower is better)
Translates to: SSPRRRRQLFRVASS*LARSEDCRSSSISS
Trigger: GGATGAGATGGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCCGTCGTCGCCTGGGCGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 90 bp GCCTTCTGTAGCTCTTCCACCTGCGCCCTCAGCTCCGACAGCTGCTaGTGGTTCAGCCGTTGCTGTGCTTCCAGCCCATGGCGTGCACGG +
Preference number: 5 (lower is better)
Translates to: AFCSSSTCALSSDSC*WFSRCCASSPWRAR
Trigger: CCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAGGGCGCAGGTGGAAGAGCTACAGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp GCTTGTGCCTCCTGGGATAGGCTGGTCAGTGCCTGGTTCCGTTGTTaGAGCTCAGCGACCTCGCGCTCTAGTTCCAGGCAGCGAAGCCGA +
Preference number: 5 (lower is better)
Translates to: ACASWDRLVSAWFRC*SSATSRSSSRQRSR
Trigger: TCGGCTTCGCTGCCTGGAACTAGAGCGCGAGGTCGCTGAGCTGCAACAACGGAACCAGGCACTGACCAGCCTATCCCAGGAGGCACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp AAGGCCTTCTGTAGCTCTTCCACCTGCGCCCTCAGCTCCGACAGCTaGTGCTGGTTCAGCCGTTGCTGTGCTTCCAGCCCATGGCGTGCA +
Preference number: 5 (lower is better)
Translates to: KAFCSSSTCALSSDS*CWFSRCCASSPWRA
Trigger: TGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAGGGCGCAGGTGGAAGAGCTACAGAAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 90 bp CGGCGGTATCGTTCCTCCATGGCCCGCAGGTCTGCATCCTTCTTCTaGAGACTGTCCTGTAGCTCCTCGATCCGCCGAGCTGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RRYRSSMARRSASFF*RLSCSSSIRRAVLL
Trigger: CAGCAGCACAGCTCGGCGGATCGAGGAGCTACAGGACAGTCTGCAGAAGAAGGATGCAGACCTGCGGGCCATGGAGGAACGATACCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS GCA 90 bp GCCAGTCTTTGCTGTGCCAAGAAGGACTGGGCATGGGCAGGAGCGTaGTCTTCCCCAGCCCGATGCTCCAAGGCCATGCCCATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: ASLCCAKKDWAWAGA*SSPARCSKAMPMLY
Trigger: GTACAGCATGGGCATGGCCTTGGAGCATCGGGCTGGGGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACAGCAAAGACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CCA 90 bp TTCTGTAGCTCTTCCACCTGCGCCCTCAGCTCCGACAGCTGCTGCTaGTTCAGCCGTTGCTGTGCTTCCAGCCCATGGCGTGCACGGTTG +
Preference number: 5 (lower is better)
Translates to: FCSSSTCALSSDSCC*FSRCCASSPWRARL
Trigger: CAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAGGGCGCAGGTGGAAGAGCTACAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 90 bp CGAGCATTGGTGGCCAGTCTTTGCTGTGCCAAGAAGGACTGGGCATaGGCAGGAGCGTGCTCTTCCCCAGCCCGATGCTCCAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: RALVASLCCAKKDWA*AGACSSPARCSKAM
Trigger: CATGGCCTTGGAGCATCGGGCTGGGGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAATGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 90 bp TCCCGGTCCGCGGCCTCCTGCTGGCACAGTCTCTTGTTCTCCAGCTaGAGTCGCACTAGCGTCTCTCTGAGCTCTGCAGGCAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: SRSAASCWHSLLFSS*SRTSVSLSSAGRIS
Trigger: AGAGATCCTGCCTGCAGAGCTCAGAGAGACGCTAGTGCGACTTCAGCTGGAGAACAAGAGACTGTGCCAGCAGGAGGCCGCGGACCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 90 bp GGACAAGGTCTGAGAAGCTGTGCAGGTAACAGTGGTGCGCCTCCCTaGACCCGTGGTACTCACAGTGGCCTTCTTCAGGCATCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GQGLRSCAGNSGAPP*TRGTHSGLLQASGS
Trigger: GCTGCCCGATGCCTGAAGAAGGCCACTGTGAGTACCACGGGTCCAGGGAGGCGCACCACTGTTACCTGCACAGCTTCTCAGACCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp TGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGTGCTCTTCTGCCGCCGGAGCTCTaGGAGCTCGCCCAGGCGACG +
Preference number: 5 (lower is better)
Translates to: CGCWDLNSGPSEEQSGALLPPEL*ELAQAT
Trigger: CGTCGCCTGGGCGAGCTCCAAGAGCTCCGGCGGCAG...AAGAGCACCCGACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp TGGGTCTCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCACCATGGCGTGCACGGTaGGCCTCCTCCAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: WVSSPTILHTFVPRVPTPPWRAR*ASSRWR
Trigger: GCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGG...TGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS GCA 90 bp CGGCCCACCCTCTCTCGAAGGGCAGCGTTCTCTTGTGCCAGATTCTaGTTCTCCTCTGAAAGGAGCAAGAGCTGGCGCTCCAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: RPTLSRRAAFSCARF*FSSERSKSWRSRSR
Trigger: CCTGGATCTGGAGCGCCAGCTCTTGCTCCTTTCAGAGGAGAAGCAGAATCTGGCACAAGAGAACGCTGCCCTTCGAGAGAGGGTGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 90 bp GTCCATCTCCATCTGCCGTATCCGCAGGTTCCGCTCCCAGAGCTGTaGCCTCAAGGTATGGAATTCTGGGGACACCACAGTGGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: VHLHLPYPQVPLPEL*PQGMEFWGHHSGWP
Trigger: AGGCCACCCACTGTGGTGTCCCCAGAATTCCATACCTTGAGGTCACAGCTCTGGGAGCGGAACCTGCGGATACGGCAGATGGAGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp TCCTGTCCCTCTTCCGTCTACCTCCTGAGTGCTGGAATCACAGTCCCATATGAGTGGCCTCCAGCTGCCTaGCACGTTCGGAGGACTGCC +
Preference number: 5 (lower is better)
Translates to: SCPSSVYLLSAGITVPYEWPPAA*HVRRTA
Trigger: GGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCA...CTCATATGGGACTGTGATTCCAGCACTCAGGAGGTAGACGGAAGAGGGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp TCCTGTCCCTCTTCCGTCTACCTCCTGAGTGCTGGAATCACAGTCCCATATGAGCTGGCCCTGCAACTCTaGCACCTGCCTGCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SCPSSVYLLSAGITVPYELALQL*HLPALS
Trigger: GCTCAGCGCAGGCAGGTGCAAGAGTTGCAGGGCCAG...CTCATATGGGACTGTGATTCCAGCACTCAGGAGGTAGACGGAAGAGGGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAGCGGAGCTCCTCATaGGCCTCCCTCAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNQRSSS*ASLRES
Trigger: GGACTCCCTGAGGGAGGCCAATGAGGAGCTCCGCTG...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp GGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTCAGCGGAGCTCCTCATaGGCCTCCCTCAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GSQISLRMVVSHHVVAGIQRSSS*ASLRES
Trigger: GGACTCCCTGAGGGAGGCCAATGAGGAGCTCCGCTG...AATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp TGGGTCTCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCATGCCTGGTTCCGTTGTaGCAGCTCAGCGACCTCGCG +
Preference number: 5 (lower is better)
Translates to: WVSSPTILHTFVPRVPTPCLVPL*QLSDLA
Trigger: CGCGAGGTCGCTGAGCTGCAACAACGGAACCAGGCA...TGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp AGGCCCAGCTGGGTAAATGTAAACTGGAAGACTCCAGCAGGCAGCAGGAAGTCGGGTCCACGGCGAGCATaGGTGGCCAGTCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: RPSWVNVNWKTPAGSRKSGPRRA*VASLCC
Trigger: ACAGCAAAGACTGGCCACCAATGCTCGCCGTGGACC...CGACTTCCTGCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTGCCTGGTTCCGTTGTaGCAGCTCAGCGACCTCGCG +
Preference number: 5 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSCLVPL*QLSDLA
Trigger: CGCGAGGTCGCTGAGCTGCAACAACGGAACCAGGCA...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp GCCTGTCCCCTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAGTGCCTGGTTCCGTaGTTGCAGCTCAGCGACCTC +
Preference number: 5 (lower is better)
Translates to: ACPLLSHLRKQRAEVRLNQCLVP*LQLSDL
Trigger: GAGGTCGCTGAGCTGCAACAACGGAACCAGGCACTG...ATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAGGGGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp TTTCTGAAACAGAGTCCCAGGATGGCCTTGACCTCCTGTCCCTCTTCCGTCTACCAGTGCCTGGTTCCGTaGTTGCAGCTCAGCGACCTC +
Preference number: 5 (lower is better)
Translates to: FLKQSPRMALTSCPSSVYQCLVP*LQLSDL
Trigger: GAGGTCGCTGAGCTGCAACAACGGAACCAGGCACTG...GTAGACGGAAGAGGGACAGGAGGTCAAGGCCATCCTGGGACTCTGTTTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp GGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTCTGCTGGTTCAGCCGTaGCTGTGCTTCCAGCCCATG +
Preference number: 5 (lower is better)
Translates to: GSQISLRMVVSHHVVAGILLVQP*LCFQPM
Trigger: CATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAG...AATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS CCA 90 bp TTTCCTCTAGGTTTCGGCATTCAAACAGCCACTTCTCAGCCTTCATaGCCTCTTCCTGCCACTGGCCCTGCAACTCTTGCACCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: FPLGFGIQTATSQPS*PLPATGPATLAPAC
Trigger: GCAGGCAGGTGCAAGAGTTGCAGGGCCAGTGGCAGGAAGAGGCCATGAAGGCTGAGAAGTGGCTGTTTGAATGCCGAAACCTAGAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 90 bp GACTGTCCTGTAGCTCCTCGATCCGCCGAGCTGTGCTGCTGTCAGTaGGAGGCTCCAACTCCTCAATGTATTCTCGTTTCCTCTGCAACT +
Preference number: 5 (lower is better)
Translates to: DCPVAPRSAELCCCQ*EAPTPQCILVSSAT
Trigger: AGTTGCAGAGGAAACGAGAATACATTGAGGAGTTGGAGCCTCCCACTGACAGCAGCACAGCTCGGCGGATCGAGGAGCTACAGGACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGACCTCCAGCTGGGGCTaGAGTCCTCTGAGATGCCCT +
Preference number: 5 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQTSSWG*SPLRCP
Trigger: AGGGCATCTCAGAGGACTCAAGCCCCAGCTGGAGGT...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCCAGTGCCTGGTTCCGTaGTTGCAGCTCAGCGACCTC +
Preference number: 5 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSQCLVP*LQLSDL
Trigger: GAGGTCGCTGAGCTGCAACAACGGAACCAGGCACTG...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCCTGCCGCCGGAGCTCTaGGAGCTCGCCCAGGCGACG +
Preference number: 5 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSLPPEL*ELAQAT
Trigger: CGTCGCCTGGGCGAGCTCCAAGAGCTCCGGCGGCAG...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064495.8
CDS-3UTR CAA 90 bp CTTCTCTCCCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAACAGCGGAGCTCCTCATaGGCCTCCCTCAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LLSHLRKQRAEVRLNQGQQRSSS*ASLRES
Trigger: GGACTCCCTGAGGGAGGCCAATGAGGAGCTCCGCTG...TTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGGGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 90 bp AGCTGGGGCTTGAGTCCTCTGAGATGCCCTGGAGCCATTCGTTGTTaGACCAGGAAGGGTCTATCTGATTCAGCACATGGGCTATGGCGA +
Preference number: 5 (lower is better)
Translates to: SWGLSPLRCPGAIRC*TRKGLSDSAHGLWR
Trigger: TCGCCATAGCCCATGTGCTGAATCAGATAGACCCTTCCTGGTTCAACAACGAATGGCTCCAGGGCATCTCAGAGGACTCAAGCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 90 bp CTCTCGAAGGGCAGCGTTCTCTTGTGCCAGATTCTGCTTCTCCTCTaGAAGGAGCAAGAGCTGGCGCTCCAGATCCAGGTAATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSKGSVLLCQILLLL*KEQELALQIQVMLL
Trigger: CAGCAACATTACCTGGATCTGGAGCGCCAGCTCTTGCTCCTTTCAGAGGAGAAGCAGAATCTGGCACAAGAGAACGCTGCCCTTCGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp TCCTGTCCCTCTTCCGTCTACCTCCTGAGTGCTGGAATCACAGTCCCATATGAGCCCTGGAGCCATTCGTaGTTGAACCAGGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: SCPSSVYLLSAGITVPYEPWSHS*LNQEGS
Trigger: AGACCCTTCCTGGTTCAACAACGAATGGCTCCAGGG...CTCATATGGGACTGTGATTCCAGCACTCAGGAGGTAGACGGAAGAGGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp AGGCCCAGCTGGGTAAATGTAAACTGGAAGACTCCAGCAGGCAGCAGGAAGTCGGCCGCTCCTTCTCCTTaGTCACCAGGTCACACTTTT +
Preference number: 5 (lower is better)
Translates to: RPSWVNVNWKTPAGSRKSAAPSP*SPGHTF
Trigger: AAAAGTGTGACCTGGTGACAAAGGAGAAGGAGCGGC...CGACTTCCTGCTGCCTGCTGGAGTCTTCCAGTTTACATTTACCCAGCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACCCATGGCGTGCACGGTaGGCCTCCTCCAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYPWRAR*ASSRWR
Trigger: GCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGG...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp TCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCACTGCTGGTTCAGCCGTaGCTGTGCTTCCAGCCCATG +
Preference number: 5 (lower is better)
Translates to: SGSSQVVHEAQEKNQEESLLVQP*LCFQPM
Trigger: CATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAG...TGATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 90 bp GTTCCAGGCAGCGAAGCCGATCATCTTCCCGGCTACTCTCCAGCCTaGAATTCTCCTCTTGAAGCTGTTCTAGCTGTGACTGCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VPGSEADHLPGYSPA*NSPLEAVLAVTAEA
Trigger: TGCTTCTGCAGTCACAGCTAGAACAGCTTCAAGAGGAGAATTTCAGGCTGGAGAGTAGCCGGGAAGATGATCGGCTTCGCTGCCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp CCATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCCCTGGAGCCATTCGTaGTTGAACCAGGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PSKEAKGRSQAQSRSKAQPWSHS*LNQEGS
Trigger: AGACCCTTCCTGGTTCAACAACGAATGGCTCCAGGG...CTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp TGGGTCTCTTCACCCACAATTCTCCACACCTTTGTCCCAAGAGTTCCCACCCCAGCCGCTCCTTCTCCTTaGTCACCAGGTCACACTTTT +
Preference number: 5 (lower is better)
Translates to: WVSSPTILHTFVPRVPTPAAPSP*SPGHTF
Trigger: AAAAGTGTGACCTGGTGACAAAGGAGAAGGAGCGGC...TGGGGTGGGAACTCTTGGGACAAAGGTGTGGAGAATTGTGGGTGAAGAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp CTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATCCATGGCGTGCACGGTaGGCCTCCTCCAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: LCPQCSFYSSSLCLEYIHPWRAR*ASSRWR
Trigger: GCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGG...ATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 90 bp GCAGGATTTGAGAACTCGCCAATGAGGCTCACATCTGGGAGATGCTaGTCTGACACAGGGTGCCCCAGAACATTCTTCGAGTATTCCACC +
Preference number: 5 (lower is better)
Translates to: AGFENSPMRLTSGRC*SDTGCPRTFFEYST
Trigger: GGTGGAATACTCGAAGAATGTTCTGGGGCACCCTGTGTCAGATCAGCATCTCCCAGATGTGAGCCTCATTGGCGAGTTCTCAAATCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 90 bp ACTGAAGCAGTTTGCCAAGTTCTGCAGGATTTGAGAACTCGCCAATaGGGCTCACATCTGGGAGATGCTGATCTGACACAGGGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: TEAVCQVLQDLRTRQ*GSHLGDADLTQGAP
Trigger: TGGGGCACCCTGTGTCAGATCAGCATCTCCCAGATGTGAGCCTCATTGGCGAGTTCTCAAATCCTGCAGAACTTGGCAAACTGCTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACTGGCCTCCAGCTGCCTaGCACGTTCGGAGGACTGCC +
Preference number: 5 (lower is better)
Translates to: GPGEESRRITLLKGIVPHWPPAA*HVRRTA
Trigger: GGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCA...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064495.8
CDS-3UTR CAA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACGCTCCTCCAGCTGCCTaGCACGTTCGGAGGACTGCC +
Preference number: 5 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYAPPAA*HVRRTA
Trigger: GGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGAGC...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS TCA 90 bp TCTTCGAGTATTCCACCAAGCTCTGTAAGATCTTCTCCAGTTTCCTaGCCTTCAACCTCCAGCTGGGGCTTGAGTCCTCTGAGATGCCCT +
Preference number: 5 (lower is better)
Translates to: SSSIPPSSVRSSPVS*PSTSSWGLSPLRCP
Trigger: AGGGCATCTCAGAGGACTCAAGCCCCAGCTGGAGGTTGAAGGTCAGGAAACTGGAGAAGATCTTACAGAGCTTGGTGGAATACTCGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp TCCTGTCCCTCTTCCGTCTACCTCCTGAGTGCTGGAATCACAGTCCCATATGAGTTCCATCACTACATGTaGAACAGACTCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SCPSSVYLLSAGITVPYEFHHYM*NRLLQG
Trigger: ACCCTGGAGGAGTCTGTTCAACATGTAGTGATGGAA...CTCATATGGGACTGTGATTCCAGCACTCAGGAGGTAGACGGAAGAGGGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACTGCCTGGTTCCGTTGTaGCAGCTCAGCGACCTCGCG +
Preference number: 5 (lower is better)
Translates to: GPGEESRRITLLKGIVPHCLVPL*QLSDLA
Trigger: CGCGAGGTCGCTGAGCTGCAACAACGGAACCAGGCA...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCACTGGCCCTGCAACTCTaGCACCTGCCTGCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSLALQL*HLPALS
Trigger: GCTCAGCGCAGGCAGGTGCAAGAGTTGCAGGGCCAG...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp CATCTAAGGAAGCAAAGGGCAGAAGTCAGGCTCAATCAAGGTCAAAGGCCCAGCTTCCATCACTACATGTaGAACAGACTCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: HLRKQRAEVRLNQGQRPSFHHYM*NRLLQG
Trigger: ACCCTGGAGGAGTCTGTTCAACATGTAGTGATGGAA...GCTGGGCCTTTGACCTTGATTGAGCCTGACTTCTGCCCTTTGCTTCCTTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp ATCAGGCTCTTCCCAGGTAGTACACGAGGCCCAGGAGAAGAATCAAGAAGAATCGAATCAGGAGTGTCTTaGGTCATGAGCTCCTGGATG +
Preference number: 5 (lower is better)
Translates to: IRLFPGSTRGPGEESRRIESGVS*VMSSWM
Trigger: CATCCAGGAGCTCATGACCAAAGACACTCCTGATTC...GATTCTTCTTGATTCTTCTCCTGGGCCTCGTGTACTACCTGGGAAGAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp GGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTGCTACTGGCCCTGCAACTCTaGCACCTGCCTGCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GEESRRITLLKGIVPHLLLALQL*HLPALS
Trigger: GCTCAGCGCAGGCAGGTGCAAGAGTTGCAGGGCCAG...TAGCAGGTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCTGCTGGTTCAGCCGTaGCTGTGCTTCCAGCCCATG +
Preference number: 5 (lower is better)
Translates to: GPGEESRRITLLKGIVPHLLVQP*LCFQPM
Trigger: CATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAG...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACGGTCCACGGCGAGCATaGGTGGCCAGTCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYGPRRA*VASLCC
Trigger: ACAGCAAAGACTGGCCACCAATGCTCGCCGTGGACC...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 90 bp ATAGTACCTGCGGGACTGTGTATCAAAATTCCCGTAATTCTCTGGTaGCAGGGAATCAGGAGTGTCTTTGGTCATGAGCTCCTGGATGGC +
Preference number: 5 (lower is better)
Translates to: IVPAGLCIKIPVILW*QGIRSVFGHELLDG
Trigger: GCCATCCAGGAGCTCATGACCAAAGACACTCCTGATTCCCTGTCACCAGAGAATTACGGGAATTTTGATACACAGTCCCGCAGGTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp CTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATACCTCCAGCTGGGGCTaGAGTCCTCTGAGATGCCCT +
Preference number: 5 (lower is better)
Translates to: LCPQCSFYSSSLCLEYIHTSSWG*SPLRCP
Trigger: AGGGCATCTCAGAGGACTCAAGCCCCAGCTGGAGGT...ATGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp AGCAATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGGCCGCTCCTTCTCCTTaGTCACCAGGTCACACTTTT +
Preference number: 5 (lower is better)
Translates to: SNGLCPQCSFYSSSLCLEAAPSP*SPGHTF
Trigger: AAAAGTGTGACCTGGTGACAAAGGAGAAGGAGCGGC...CTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp AGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACCCTGGAGCCATTCGTaGTTGAACCAGGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: RPRRRIKKNHIAKRNSSTPWSHS*LNQEGS
Trigger: AGACCCTTCCTGGTTCAACAACGAATGGCTCCAGGG...TGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp AATGGTCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTGGTGGCCAGTCTTaGCTGTGCCAAGAAGGACTG +
Preference number: 5 (lower is better)
Translates to: NGLCPQCSFYSSSLCLEYIGGQS*LCQEGL
Trigger: CAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAAT...GTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp ACGAGGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCATTGGTGGCCAGTCTTaGCTGTGCCAAGAAGGACTG +
Preference number: 5 (lower is better)
Translates to: TRPRRRIKKNHIAKRNSSIGGQS*LCQEGL
Trigger: CAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAAT...GGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 90 bp GTGTCTTTGGTCATGAGCTCCTGGATGGCTTCCATCACTACATGTTaGACAGACTCCTCCAGGGTCATAATTCTTTGGATATACTCCTGT +
Preference number: 5 (lower is better)
Translates to: VSLVMSSWMASITTC*TDSSRVIILWIYSC
Trigger: ACAGGAGTATATCCAAAGAATTATGACCCTGGAGGAGTCTGTTCAACATGTAGTGATGGAAGCCATCCAGGAGCTCATGACCAAAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS-3UTR CAA 90 bp GGCCCAGGAGAAGAATCAAGAAGAATCACATTGCTAAAAGGAATAGTTCCACACGAATCAGGAGTGTCTTaGGTCATGAGCTCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GPGEESRRITLLKGIVPHESGVS*VMSSWM
Trigger: CATCCAGGAGCTCATGACCAAAGACACTCCTGATTC...GTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGATTCTTCTCCTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp TCTGTGTCCCCAGTGCAGTTTTTATTCTTCGTCATTGTGTCTAGAGTACATTCATTCCATCACTACATGTaGAACAGACTCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SVSPVQFLFFVIVSRVHSFHHYM*NRLLQG
Trigger: ACCCTGGAGGAGTCTGTTCAACATGTAGTGATGGAA...TGAATGTACTCTAGACACAATGACGAAGAATAAAAACTGCACTGGGGACACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS-3UTR CAA 90 bp GGAATTCAAGACCAGTTTCAGGTACACAACTTCCAGTCTCAAAATAAAGACTCTGAATCAGGAGTGTCTTaGGTCATGAGCTCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GIQDQFQVHNFQSQNKDSESGVS*VMSSWM
Trigger: CATCCAGGAGCTCATGACCAAAGACACTCCTGATTC...AGAGTCTTTATTTTGAGACTGGAAGTTGTGTACCTGAAACTGGTCTTGAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS GCA 72 bp GTGCGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTaGCGCACCTGCCGCCGGAGCTCTTGGAGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: VRSAWPAFRSSS*RTCRRSSWSSP
Trigger: GGGCGAGCTCCAAGAGCTCCGGCGGCAGGTGCGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 72 bp CTCCTCTTCCAGCTGCCGCGTGCGCTCCGCGTGGCCTaGATTTCGCTCCTCCAGCTGCCGCACCTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: LLFQLPRALRVA*ISLLQLPHLPP
Trigger: CGGCGGCAGGTGCGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 72 bp CCATGGCGTGCACGGTTGGCCTCCTCCAGGTGGCGCTaGAGTTCCTCCTGTCGCTCCCGGTCCGCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PWRARLASSRWR*SSSCRSRSAAS
Trigger: GGAGGCCGCGGACCGGGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp GCGTGGCCTGCATTTCGCTCCTCCAGCTGCCGCACCTaGCGCCGGAGCTCTTGGAGCTCGCCCAGGCGACGA +
Preference number: 6 (lower is better)
Translates to: AWPAFRSSSCRT*RRSSWSSPRRR
Trigger: TCGTCGCCTGGGCGAGCTCCAAGAGCTCCGGCGGCAGGTGCGGCAGCTGGAGGAGCGAAATGCAGGCCACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 72 bp CGCAGGGATCCTGCACGGCGCAGCTCCTCTTCCAGCTaGCGCGTGCGCTCCGCGTGGCCTGCATTTCGCTCC +
Preference number: 6 (lower is better)
Translates to: RRDPARRSSSSS*RVRSAWPAFRS
Trigger: GGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGTGCAGGATCCCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 72 bp CGCAGCTCCTCTTCCAGCTGCCGCGTGCGCTCCGCGTaGCCTGCATTTCGCTCCTCCAGCTGCCGCACCTGC +
Preference number: 6 (lower is better)
Translates to: RSSSSSCRVRSA*PAFRSSSCRTC
Trigger: GCAGGTGCGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 72 bp ATCCTGCACGGCGCAGCTCCTCTTCCAGCTGCCGCGTaGGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ILHGAAPLPAAA*APRGLHFAPPA
Trigger: AGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCGCCGTGCAGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 72 bp GGAGCTCGCCCAGGCGACGACGGCAGCTGTTCAGAGTaGCCTCCAGCTGCCTTGCACGTTCGGAGGACTGCC +
Preference number: 6 (lower is better)
Translates to: GARPGDDGSCSE*PPAALHVRRTA
Trigger: GGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCCGTCGTCGCCTGGGCGAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS CCA 72 bp CGCAGCTCCTCTTCCAGCTGCCGCGTGCGCTCCGCGTaGCCTGCATTTCGCTCCTCCAGCTGCCTTGCACGT +
Preference number: 6 (lower is better)
Translates to: RSSSSSCRVRSA*PAFRSSSCLAR
Trigger: ACGTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS CAA 90 bp TGCTGGTTCAGCCGTTGCTGTGCTTCCAGCCCATGGCGTGCACGGTaGGCCTCCTCCAGGTGGCGCTGCAGTTCCTCCTGTCGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: CWFSRCCASSPWRAR*ASSRWRCSSSCRSR
Trigger: CCGGGAGCGACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp CTTCCTGCCACTGGCCCTGCAACTCTTGCACCTGCCTaGGCTGAGCCTCGAGCTGGGCACGCAGGGATCCTG +
Preference number: 6 (lower is better)
Translates to: LPATGPATLAPA*AEPRAGHAGIL
Trigger: CAGGATCCCTGCGTGCCCAGCTCGAGGCTCAGCGCAGGCAGGTGCAAGAGTTGCAGGGCCAGTGGCAGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp GCCCTCAGCTCCGACAGCTGCTGCTGGTTCAGCCGTTaGTGTGCTTCCAGCCCATGGCGTGCACGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: ALSSDSCCWFSR*CASSPWRARLA
Trigger: GGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp GTGCGCTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTaGCTTGCACGTTCGGAGGACTGCCGCAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: VRSAWPAFRSSS*LARSEDCRSSS
Trigger: GGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS GCA 72 bp CTCCTCTTCCAGCTGCCGCGTGCGCTCCGCGTGGCCTaGATTTCGCTCCTCCAGCTGCCTTGCACGTTCGGA +
Preference number: 6 (lower is better)
Translates to: LLFQLPRALRVA*ISLLQLPCTFG
Trigger: TCCGAACGTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAGCGCACGCGGCAGCTGGAAGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS CCA 72 bp GCCGTTGCTGTGCTTCCAGCCCATGGCGTGCACGGTTaGCCTCCTCCAGGTGGCGCTGCAGTTCCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: AVAVLPAHGVHG*PPPGGAAVPPV
Trigger: GACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CAA 72 bp CGCCCTCAGCTCCGACAGCTGCTGCTGGTTCAGCCGTaGCTGTGCTTCCAGCCCATGGCGTGCACGGTTGGC +
Preference number: 6 (lower is better)
Translates to: RPQLRQLLLVQP*LCFQPMACTVG
Trigger: GCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CAA 90 bp TTCCACCTGCGCCCTCAGCTCCGACAGCTGCTGCTGGTTCAGCCGTaGCTGTGCTTCCAGCCCATGGCGTGCACGGTTGGCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: FHLRPQLRQLLLVQP*LCFQPMACTVGLLQ
Trigger: CTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTGAGGGCGCAGGTGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CAA 90 bp AGCCTGGCGCCCCAGGGGTCCACGGCGAGCATTGGTGGCCAGTCTTaGCTGTGCCAAGAAGGACTGGGCATGGGCAGGAGCGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SLAPQGSTASIGGQS*LCQEGLGMGRSVLF
Trigger: GAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAATGCTCGCCGTGGACCCCTGGGGCGCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS GCA 72 bp AGGCGACGACGGCAGCTGTTCAGAGTGGCCTCCAGCTaGCTTGCACGTTCGGAGGACTGCCGCAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: RRRRQLFRVASS*LARSEDCRSSS
Trigger: GGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCCGTCGTCGCCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 72 bp CTGGTTCAGCCGTTGCTGTGCTTCCAGCCCATGGCGTaGACGGTTGGCCTCCTCCAGGTGGCGCTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: LVQPLLCFQPMA*TVGLLQVALQF
Trigger: GAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp CAGCTCCGACAGCTGCTGCTGGTTCAGCCGTTGCTGTaGTTCCAGCCCATGGCGTGCACGGTTGGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QLRQLLLVQPLL*FQPMACTVGLL
Trigger: GAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCTGAACCAGCAGCAGCTGTCGGAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp TGCTGTGCCAAGAAGGACTGGGCATGGGCAGGAGCGTaGTCTTCCCCAGCCCGATGCTCCAAGGCCATGCCC +
Preference number: 6 (lower is better)
Translates to: CCAKKDWAWAGA*SSPARCSKAMP
Trigger: GGGCATGGCCTTGGAGCATCGGGCTGGGGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CCA 72 bp CCCTGGGCTGCAGCTGGGCACAGCGGAGCTCCTCATTaGCCTCCCTCAGGGAGTCCCTCTCAGTCAATAGCC +
Preference number: 6 (lower is better)
Translates to: PWAAAGHSGAPH*PPSGSPSQSIA
Trigger: GGCTATTGACTGAGAGGGACTCCCTGAGGGAGGCCAATGAGGAGCTCCGCTGTGCCCAGCTGCAGCCCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 72 bp TCAGAGCCTGGCGCCCCAGGGGTCCACGGCGAGCATTaGTGGCCAGTCTTTGCTGTGCCAAGAAGGACTGGG +
Preference number: 6 (lower is better)
Translates to: SEPGAPGVHGEH*WPVFAVPRRTG
Trigger: CCCAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAATGCTCGCCGTGGACCCCTGGGGCGCCAGGCTCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CAA 72 bp AGCCGTTGCTGTGCTTCCAGCCCATGGCGTGCACGGTaGGCCTCCTCCAGGTGGCGCTGCAGTTCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: SRCCASSPWRAR*ASSRWRCSSSC
Trigger: ACAGGAGGAACTGCAGCGCCACCTGGAGGAGGCCAACCGTGCACGCCATGGGCTGGAAGCACAGCAACGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp CTCCGCGTGGCCTGCATTTCGCTCCTCCAGCTGCCTTaGACGTTCGGAGGACTGCCGCAGCTCATCCATCTC +
Preference number: 6 (lower is better)
Translates to: LRVACISLLQLP*TFGGLPQLIHL
Trigger: GAGATGGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGAGCGAAATGCAGGCCACGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209764.2
CDS CCA 72 bp GTGGCCAGTCTTTGCTGTGCCAAGAAGGACTGGGCATaGGCAGGAGCGTGCTCTTCCCCAGCCCGATGCTCC +
Preference number: 6 (lower is better)
Translates to: VASLCCAKKDWA*AGACSSPARCS
Trigger: GGAGCATCGGGCTGGGGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACAGCAAAGACTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CAA 90 bp CGCCCAGGCGACGACGGCAGCTGTTCAGAGTGGCCTCCAGCTGCCTaGCACGTTCGGAGGACTGCCGCAGCTCATCCATCTCATCCTTTA +
Preference number: 6 (lower is better)
Translates to: RPGDDGSCSEWPPAA*HVRRTAAAHPSHPL
Trigger: TAAAGGATGAGATGGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCCGTCGTCGCCTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS GCA 72 bp ACGACGGCAGCTGTTCAGAGTGGCCTCCAGCTGCCTTaGACGTTCGGAGGACTGCCGCAGCTCATCCATCTC +
Preference number: 6 (lower is better)
Translates to: TTAAVQSGLQLP*TFGGLPQLIHL
Trigger: GAGATGGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCCGTCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS CCA 72 bp GCATTGGTGGCCAGTCTTTGCTGTGCCAAGAAGGACTaGGCATGGGCAGGAGCGTGCTCTTCCCCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: ALVASLCCAKKD*AWAGACSSPAR
Trigger: TCGGGCTGGGGAAGAGCACGCTCCTGCCCATGCCCAGTCCTTCTTGGCACAGCAAAGACTGGCCACCAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CAA 72 bp GACGACGGCAGCTGTTCAGAGTGGCCTCCAGCTGCCTaGCACGTTCGGAGGACTGCCGCAGCTCATCCATCT +
Preference number: 6 (lower is better)
Translates to: DDGSCSEWPPAA*HVRRTAAAHPS
Trigger: AGATGGATGAGCTGCGGCAGTCCTCCGAACGTGCAAGGCAGCTGGAGGCCACTCTGAACAGCTGCCGTCGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000210326.2
CDS TCA 72 bp GCGGCCTCCTGCTGGCACAGTCTCTTGTTCTCCAGCTaGAGTCGCACTAGCGTCTCTCTGAGCTCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: AASCWHSLLFSS*SRTSVSLSSAG
Trigger: GCCTGCAGAGCTCAGAGAGACGCTAGTGCGACTTCAGCTGGAGAACAAGAGACTGTGCCAGCAGGAGGCCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp TCCTGGGATAGGCTGGTCAGTGCCTGGTTCCGTTGTTaGAGCTCAGCGACCTCGCGCTCTAGTTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SWDRLVSAWFRC*SSATSRSSSRQ
Trigger: CTGCCTGGAACTAGAGCGCGAGGTCGCTGAGCTGCAACAACGGAACCAGGCACTGACCAGCCTATCCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp GCAGACTGTCCTGTAGCTCCTCGATCCGCCGAGCTGTaGTGCTGTCAGTGGGAGGCTCCAACTCCTCAATGT +
Preference number: 6 (lower is better)
Translates to: ADCPVAPRSAEL*CCQWEAPTPQC
Trigger: ACATTGAGGAGTTGGAGCCTCCCACTGACAGCAGCACAGCTCGGCGGATCGAGGAGCTACAGGACAGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CCA 72 bp ACCAGGAAGGGTCTATCTGATTCAGCACATGGGCTATaGCGAGTCCGCTGCTCAGGTCCTGGGGACTGGCAC +
Preference number: 6 (lower is better)
Translates to: TRKGLSDSAHGL*RVRCSGPGDWH
Trigger: GTGCCAGTCCCCAGGACCTGAGCAGCGGACTCGCCATAGCCCATGTGCTGAATCAGATAGACCCTTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 72 bp CTGAGAAGCTGTGCAGGTAACAGTGGTGCGCCTCCCTaGACCCGTGGTACTCACAGTGGCCTTCTTCAGGCA +
Preference number: 6 (lower is better)
Translates to: LRSCAGNSGAPP*TRGTHSGLLQA
Trigger: TGCCTGAAGAAGGCCACTGTGAGTACCACGGGTCCAGGGAGGCGCACCACTGTTACCTGCACAGCTTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210326.2
CDS TCA 72 bp CATCTGCCGTATCCGCAGGTTCCGCTCCCAGAGCTGTaGCCTCAAGGTATGGAATTCTGGGGACACCACAGT +
Preference number: 6 (lower is better)
Translates to: HLPYPQVPLPEL*PQGMEFWGHHS
Trigger: ACTGTGGTGTCCCCAGAATTCCATACCTTGAGGTCACAGCTCTGGGAGCGGAACCTGCGGATACGGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS GCA 72 bp CTCTCTCGAAGGGCAGCGTTCTCTTGTGCCAGATTCTaGTTCTCCTCTGAAAGGAGCAAGAGCTGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: LSRRAAFSCARF*FSSERSKSWRS
Trigger: GGAGCGCCAGCTCTTGCTCCTTTCAGAGGAGAAGCAGAATCTGGCACAAGAGAACGCTGCCCTTCGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp GACTGTCCTGTAGCTCCTCGATCCGCCGAGCTGTGCTaGTGTCAGTGGGAGGCTCCAACTCCTCAATGTATT +
Preference number: 6 (lower is better)
Translates to: DCPVAPRSAELC*CQWEAPTPQCI
Trigger: AATACATTGAGGAGTTGGAGCCTCCCACTGACAGCAGCACAGCTCGGCGGATCGAGGAGCTACAGGACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS CCA 72 bp GTAGCTCCTCGATCCGCCGAGCTGTGCTGCTGTCAGTaGGAGGCTCCAACTCCTCAATGTATTCTCGTTTCC +
Preference number: 6 (lower is better)
Translates to: VAPRSAELCCCQ*EAPTPQCILVS
Trigger: GGAAACGAGAATACATTGAGGAGTTGGAGCCTCCCACTGACAGCAGCACAGCTCGGCGGATCGAGGAGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 72 bp GGCAGCGTTCTCTTGTGCCAGATTCTGCTTCTCCTCTaGAAGGAGCAAGAGCTGGCGCTCCAGATCCAGGTA +
Preference number: 6 (lower is better)
Translates to: GSVLLCQILLLL*KEQELALQIQV
Trigger: TACCTGGATCTGGAGCGCCAGCTCTTGCTCCTTTCAGAGGAGAAGCAGAATCTGGCACAAGAGAACGCTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CCA 72 bp AACCTCCAGCTGGGGCTTGAGTCCTCTGAGATGCCCTaGAGCCATTCGTTGTTGAACCAGGAAGGGTCTATC +
Preference number: 6 (lower is better)
Translates to: NLQLGLESSEMP*SHSLLNQEGSI
Trigger: GATAGACCCTTCCTGGTTCAACAACGAATGGCTCCAGGGCATCTCAGAGGACTCAAGCCCCAGCTGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 72 bp GAGAACTCGCCAATGAGGCTCACATCTGGGAGATGCTaGTCTGACACAGGGTGCCCCAGAACATTCTTCGAG +
Preference number: 6 (lower is better)
Translates to: ENSPMRLTSGRC*SDTGCPRTFFE
Trigger: CTCGAAGAATGTTCTGGGGCACCCTGTGTCAGATCAGCATCTCCCAGATGTGAGCCTCATTGGCGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CAA 72 bp GGGAGTCCCTCTCAGTCAATAGCCGCTCCTTCTCCTTaGTCACCAGGTCACACTTTTCCTCTAGGTTTCGGC +
Preference number: 6 (lower is better)
Translates to: GSPSQSIAAPSP*SPGHTFPLGFG
Trigger: GCCGAAACCTAGAGGAAAAGTGTGACCTGGTGACAAAGGAGAAGGAGCGGCTATTGACTGAGAGGGACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 72 bp CTCGCCAATGAGGCTCACATCTGGGAGATGCTGATCTaGCACAGGGTGCCCCAGAACATTCTTCGAGTATTC +
Preference number: 6 (lower is better)
Translates to: LANEAHIWEMLI*HRVPQNILRVF
Trigger: GAATACTCGAAGAATGTTCTGGGGCACCCTGTGTCAGATCAGCATCTCCCAGATGTGAGCCTCATTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS GCA 72 bp GGAGGCTCCAACTCCTCAATGTATTCTCGTTTCCTCTaGAACTCCAGGTCAGCCTCATGCAGCTTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GGSNSSMYSRFL*NSRSASCSFCR
Trigger: TCTGCAGAAGCTGCATGAGGCTGACCTGGAGTTGCAGAGGAAACGAGAATACATTGAGGAGTTGGAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
CDS TCA 72 bp GTTTGCCAAGTTCTGCAGGATTTGAGAACTCGCCAATaGGGCTCACATCTGGGAGATGCTGATCTGACACAG +
Preference number: 6 (lower is better)
Translates to: VCQVLQDLRTRQ*GSHLGDADLTQ
Trigger: CTGTGTCAGATCAGCATCTCCCAGATGTGAGCCTCATTGGCGAGTTCTCAAATCCTGCAGAACTTGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 72 bp TCTTCCCGGCTACTCTCCAGCCTGAAATTCTCCTCTTaGAGCTGTTCTAGCTGTGACTGCAGAAGCAATAGC +
Preference number: 6 (lower is better)
Translates to: SSRLLSSLKFSS*SCSSCDCRSNS
Trigger: GCTATTGCTTCTGCAGTCACAGCTAGAACAGCTTCAAGAGGAGAATTTCAGGCTGGAGAGTAGCCGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 72 bp GCGGGACTGTGTATCAAAATTCCCGTAATTCTCTGGTaGCAGGGAATCAGGAGTGTCTTTGGTCATGAGCTC +
Preference number: 6 (lower is better)
Translates to: AGLCIKIPVILW*QGIRSVFGHEL
Trigger: GAGCTCATGACCAAAGACACTCCTGATTCCCTGTCACCAGAGAATTACGGGAATTTTGATACACAGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CAA 72 bp GGTCATGAGCTCCTGGATGGCTTCCATCACTACATGTaGAACAGACTCCTCCAGGGTCATAATTCTTTGGAT +
Preference number: 6 (lower is better)
Translates to: GHELLDGFHHYM*NRLLQGHNSLD
Trigger: ATCCAAAGAATTATGACCCTGGAGGAGTCTGTTCAACATGTAGTGATGGAAGCCATCCAGGAGCTCATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS CAA 90 bp AGTGTCTTTGGTCATGAGCTCCTGGATGGCTTCCATCACTACATGTaGAACAGACTCCTCCAGGGTCATAATTCTTTGGATATACTCCTG +
Preference number: 6 (lower is better)
Translates to: SVFGHELLDGFHHYM*NRLLQGHNSLDILL
Trigger: CAGGAGTATATCCAAAGAATTATGACCCTGGAGGAGTCTGTTCAACATGTAGTGATGGAAGCCATCCAGGAGCTCATGACCAAAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 72 bp GTCATGAGCTCCTGGATGGCTTCCATCACTACATGTTaGACAGACTCCTCCAGGGTCATAATTCTTTGGATA +
Preference number: 6 (lower is better)
Translates to: VMSSWMASITTC*TDSSRVIILWI
Trigger: TATCCAAAGAATTATGACCCTGGAGGAGTCTGTTCAACATGTAGTGATGGAAGCCATCCAGGAGCTCATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2
CDS TCA 72 bp TTTTTCTCACAACTGATAGCACAGCCCAGTACCAACTaGAGCAGTTTGCCAAGTTCTGCAGGATTTGAGAAC +
Preference number: 6 (lower is better)
Translates to: FFSQLIAQPSTN*SSLPSSAGFEN
Trigger: GTTCTCAAATCCTGCAGAACTTGGCAAACTGCTTCAGTTGGTACTGGGCTGTGCTATCAGTTGTGAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064495.8
ENSMUST00000209764.2
ENSMUST00000210326.2