Pregenerated sensors for HOMEZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057156Ensembl transcript IDs: ENSMUST00000081162.6, ENSMUST00000142283.4, ENSMUST00000146642.2, ENSMUST00000176259.3
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCTGCTCTTCCAGGGTACCTGGGTTCGATTCCAGCACCCACATaGTGGATCACAATCCTCTGTAACTCCAGTCCCAGGGGATCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: VAALPGYLGSIPAPT*WITILCNSSPRGSP Trigger: TGGAGATCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGGAATCGAACCCAGGTACCCTGGAAGAGCAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR GCA 90 bp | GTTAGTCCTGGGGATCCAACTCAAGTCTCTAGACTTGGTGGCAAGTaGCATCTCAGTGGCTGTCTTCCCCAGGGCTTCAGGAAGATCTTC | + |
|
Preference number: 1 (lower is better) Translates to: VSPGDPTQVSRLGGK*HLSGCLPQGFRKIF Trigger: GAAGATCTTCCTGAAGCCCTGGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTGGATCCCCAGGACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 90 bp | AGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTaGGATCAATTGGATCACAATACTTCTCTCCATTCAGGTTCCCTG | + |
|
Preference number: 1 (lower is better) Translates to: RQARHKESLTNAGVH*DQLDHNTSLHSGSL Trigger: CAGGGAACCTGAATGGAGAGAAGTATTGTGATCCAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 90 bp | CATGTGCTCAGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATaGTGGGGTGCACTGGGATCAATTGGATCACAATACTTCTCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: HVLRKTGQAQGVSDK*WGALGSIGSQYFSP Trigger: TGGAGAGAAGTATTGTGATCCAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCTGAGCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 90 bp | GTGCTCAGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTaGGGTGCACTGGGATCAATTGGATCACAATACTTCTCTCCATTC | + |
|
Preference number: 1 (lower is better) Translates to: VLRKTGQAQGVSDKC*GALGSIGSQYFSPF Trigger: GAATGGAGAGAAGTATTGTGATCCAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCTGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 90 bp | TATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTaGATTTGTGTTGATCCAATACTTCAGTTTGTCCTGGTCACCCTC | + |
|
Preference number: 1 (lower is better) Translates to: YLPRSQTLSTRRLEN*ICVDPILQFVLVTL Trigger: GAGGGTGACCAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 90 bp | TCAGCCAGTATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGCTaGAGAATTGGATTTGTGTTGATCCAATACTTCAGTTTGTCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: SASICPDPKLSLHGG*RIGFVLIQYFSLSW Trigger: CCAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATACTGGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 90 bp | ATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTTaGTCCAATACTTCAGTTTGTCCTGGTCACCCTCTCCAGTTTACT | + |
|
Preference number: 1 (lower is better) Translates to: IPNSLYTEAGELDLC*SNTSVCPGHPLQFT Trigger: AGTAAACTGGAGAGGGTGACCAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 90 bp | TTACAACCTGTTGTCACTGCTGGAGGGCCAATAAACCTTGTCATCTaGTGGCTGCAAACCATGCATGTAGCAATAGATGCTGAATTACTG | + |
|
Preference number: 1 (lower is better) Translates to: LQPVVTAGGPINLVI*WLQTMHVAIDAELL Trigger: CAGTAATTCAGCATCTATTGCTACATGCATGGTTTGCAGCCATCAGATGACAAGGTTTATTGGCCCTCCAGCAGTGACAACAGGTTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 90 bp | TTTATCCTGGTTCATTTCTGGATTTCACTGCTTAGCTCTGGACGTTaGTATCCTGTGGCCAATGTTAATAAACAACTGTTCCCCACCCTC | + |
|
Preference number: 1 (lower is better) Translates to: FILVHFWISLLSSGR*YPVANVNKQLFPTL Trigger: GAGGGTGGGGAACAGTTGTTTATTAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAATGAACCAGGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 90 bp | AACTTTATTGGTAGGACACCTTTAGTAGTCTGTATTGTCATAACATaGAAATCTGTTCTCTGCTGCAGACGTTCTACCAACAGAGGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: NFIGRTPLVVCIVIT*KSVLCCRRSTNRGR Trigger: TCTGCCTCTGTTGGTAGAACGTCTGCAGCAGAGAACAGATTTGCATGTTATGACAATACAGACTACTAAAGGTGTCCTACCAATAAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 90 bp | TTCATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTaGCCAATGTTAATAAACAACTGTTCCCCACCCTCATGTATTATA | + |
|
Preference number: 1 (lower is better) Translates to: FISGFHCLALDVAIL*PMLINNCSPPSCII Trigger: TATAATACATGAGGGTGGGGAACAGTTGTTTATTAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 90 bp | TTTGGCATAGGAAGACTAGATAATATATTTATCCTGGTTCATTTCTaGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAAT | + |
|
Preference number: 1 (lower is better) Translates to: FGIGRLDNIFILVHF*ISLLSSGRCYPVAN Trigger: ATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAATGAACCAGGATAAATATATTATCTAGTCTTCCTATGCCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCAGGCACAAGGAGTCTCTaGCAAATGCTGGGGTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: SSRGPECNSHQPHGGSQPGTRSL*QMLGCT Trigger: AGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCC...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCGGAGTCTCTGACAAATaGTGGGGTGCACTGGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: QLKSLDLVASAISVAVFPGVSDK*WGALGS Trigger: TGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCC...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCACCCACATGGTGGATCACAATCCTCTGTAACTCCAGTCCCAGGGGATCTGAACAGCAGCAGCCATaGCTTCACAGTGAGTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PAPTWWITILCNSSPRGSEQQQP*LHSEFK Trigger: CTTGAACTCACTGTGAAGCCATGGCTGCTGCTGTTC...AGATCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTCAAGTGCCATCTCAGTaGCTGTCTTCCCCAGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNIQVPSQ*LSSPGL Trigger: AAGCCCTGGGGAAGACAGCCACTGAGATGGCACTTG...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCTGCAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGACGTCTCCAGCCCCCTaGGTTTTGTTTACTTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SAADVLPTEADGTSQERRTSPAP*VLFTLC Trigger: ACACAAAGTAAACAAAACCCAGGGGGCTGGAGACGT...CCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 90 bp | TTTCCAACAAAGTTAGTCCTGGGGATCCAACTCAAGTCTCTAGACTaGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCAGGGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FPTKLVLGIQLKSLD*VASAISVAVFPRAS Trigger: TGAAGCCCTGGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTGGATCCCCAGGACTAACTTTGTTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCGCAGATTACCCCCTTTaGCTACACAGGAACACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QLKSLDLVASAISVAVFPADYPL*LHRNTK Trigger: TTTTGTGTTCCTGTGTAGGCAAAGGGGGTAATCTGC...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCCATCTCTCCCATATGTaGGGCCTTTCATTTCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: QLKSLDLVASAISVAVFPHLSHM*GLSFPS Trigger: ACTAGGAAATGAAAGGCCGCACATATGGGAGAGATG...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTAGACTTGGTGGCAAGTaGCATCTCAGTGGCTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNIRLGGK*HLSGCL Trigger: AAGACAGCCACTGAGATGGCACTTGCCACCAAGTCT...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCATACTTCAGTTTGTCCTaGTCACCCTCTCCAGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SSRGPECNSHQPHGGSQPYFSLS*SPSPVY Trigger: GTAAACTGGAGAGGGTGACCAGGACAAACTGAAGTA...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | AACACTGCTCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTTCTCTACACGGAGGCTaGAGAATTGGATTTGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NTALPEVLSAIPINPMVASLHGG*RIGFVL Trigger: CAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGA...AGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGAGCAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTAGGCACAAGGAGTCTCTaGCAAATGCTGGGGTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: ISGFHCLALDVAILWPMLGTRSL*QMLGCT Trigger: AGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCC...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTACCGCCCTTCTCCTCTaGCTCACTGTTATGTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNITALLL*LTVMFQ Trigger: TTGAAACATAACAGTGAGTCAGAGGAGAAGGGCGGT...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCGACGGAGATAAATCTTaGAACACAGAAGTGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QLKSLDLVASAISVAVFPDGDKS*NTEVAK Trigger: CTTTGCCACTTCTGTGTTTCAAGATTTATCTCCGTC...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTCTTAGCTCTGGACGTTaGTATCCTGTGGCCAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNILSSGR*YPVANV Trigger: AACATTGGCCACAGGATAGCAACGTCCAGAGCTAAG...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCACGGAGGCTGGAGAATTaGATTTGTGTTGATCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: SSRGPECNSHQPHGGSQPRRLEN*ICVDPI Trigger: TATTGGATCAACACAAATCCAATTCTCCAGCCTCCG...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTACACTAGCTGCAGTGTaGCTGAACATGTGCTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: DGTSQERRMEHFQIDIPLTLAAV*LNMCSE Trigger: TTCTGAGCACATGTTCAGGCACACTGCAGCTAGTGT...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTGGTCTGAGGACAACTTaGAGGAGTCAGTTCTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: DGTSQERRMEHFQIDIPLGLRTT*RSQFFP Trigger: TGGAAAGAACTGACTCCTGCAAGTTGTCCTCAGACC...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCTCAGCGTTTAGGAGATaGAAACAGGAAGATAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QLKSLDLVASAISVAVFPSAFRR*KQEDKN Trigger: GTTCTTATCTTCCTGTTTCCATCTCCTAAACGCTGA...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 90 bp | GATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTaGATCCAATACTTCAGTTTGTCCTGGTCACCCTCTCCAGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: DPKLSLHGGWRIGFV*IQYFSLSWSPSPVY Trigger: GTAAACTGGAGAGGGTGACCAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTGTTCTAGAACATCATTaGGTTAGAAGACCATGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNIVLEHH*VRRPWS Trigger: GGACCATGGTCTTCTAACTCAATGATGTTCTAGAAC...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCAAGGCAGCGTGTGAGCTaGCTGACATGGGTGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSRQRVS*LTWVLG Trigger: CCCCAGCACCCATGTCAGTCAGCTCACACGCTGCCT...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCGCAGATTACCCCCTTTaGCTACACAGGAACACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KSKARALFSQYLPRSQTLADYPL*LHRNTK Trigger: TTTTGTGTTCCTGTGTAGGCAAAGGGGGTAATCTGC...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTCATCTCTCCCATATGTaGGGCCTTTCATTTCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: DGTSQERRMEHFQIDIPLHLSHM*GLSFPS Trigger: ACTAGGAAATGAAAGGCCGCACATATGGGAGAGATG...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTAACACTAGCTGCAGTGTaGCTGAACATGTGCTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ISGFHCLALDVAILWPMLTLAAV*LNMCSE Trigger: TTCTGAGCACATGTTCAGGCACACTGCAGCTAGTGT...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTGACGTTGCTATCCTGTaGCCAATGTTAATAAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNIDVAIL*PMLINN Trigger: GTTGTTTATTAACATTGGCCACAGGATAGCAACGTC...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCCCAGAAGAGGGTGTATaGTCCCCTAAAGCCAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: WFQSAACFLERYLTCLSLPEEGV*SPKARV Trigger: AACCCTGGCTTTAGGGGATCATACACCCTCTTCTGG...GAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTGCAGCTTGTTTTCTTaGACGTTATCTTACATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNICSLFS*TLSYMS Trigger: AGACATGTAAGATAACGTTCAAGAAAACAAGCTGCA...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTCAATCTATATCAATCTaGGCAGAAAATAGTGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TFYQQRQMGLARKDGWNIQSISI*AENSVR Trigger: CCTGACACTATTTTCTGCCCAGATTGATATAGATTG...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 90 bp | CTCTCCCATATGTGCGGCCTTTCATTTCCTAGTTTGAGACTAAGGTaGCAAAAATCCTTAGCCTCATGCTTTGGCATAGGAAGACTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSHMCGLSFPSLRLR*QKSLASCFGIGRLD Trigger: ATCTAGTCTTCCTATGCCAAAGCATGAGGCTAAGGATTTTTGCAACCTTAGTCTCAAACTAGGAAATGAAAGGCCGCACATATGGGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 90 bp | GAAGATCTTCATCTCTCCCATATGTGCGGCCTTTCATTTCCTAGTTaGAGACTAAGGTTGCAAAAATCCTTAGCCTCATGCTTTGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: EDLHLSHMCGLSFPS*RLRLQKSLASCFGI Trigger: TATGCCAAAGCATGAGGCTAAGGATTTTTGCAACCTTAGTCTCAAACTAGGAAATGAAAGGCCGCACATATGGGAGAGATGAAGATCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCACCCTTCCGGTGTGTCTaGAGACAGCAACAGTGTACT | + |
|
Preference number: 2 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSPFRCV*RQQQCT Trigger: AGTACACTGTTGCTGTCTTCAGACACACCGGAAGGG...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR CCA 90 bp | CATGGTCCTTCTGTCCACAAGACAGATCCTATAAAGAGGGAAACATCTCTTGTTCGGAGGCTGGAGAATTaGATTTGTGTTGATCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: HGPSVHKTDPIKRETSLVRRLEN*ICVDPI Trigger: TATTGGATCAACACAAATCCAATTCTCCAGCCTCCG...AACAAGAGATGTTTCCCTCTTTATAGGATCTGTCTTGTGGACAGAAGGACCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCGCCATGGCTTCACAGTaGGTTCAAGACAAGCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: WFQSAACFLERYLTCLSLAMASQ*VQDKHL Trigger: TAAATGCTTGTCTTGAACTCACTGTGAAGCCATGGC...GAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCATAAACCTTGTCATCTaGTGGCTGCAAACCATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: WFQSAACFLERYLTCLSLINLVI*WLQTMH Trigger: ATGCATGGTTTGCAGCCATCAGATGACAAGGTTTAT...GAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCATCCCTCTTCCAGGTCTaGTCTGTGCATAATGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSSLFQV*SVHNAQ Trigger: TTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGA...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCATCTCTACACGGAGGCTaGAGAATTGGATTTGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSSLHGG*RIGFVL Trigger: CAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGA...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCAATAAACCTTGTCATCTaGTGGCTGCAAACCATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSINLVI*WLQTMH Trigger: ATGCATGGTTTGCAGCCATCAGATGACAAGGTTTAT...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCAGACGTTGCTATCCTGTaGCCAATGTTAATAAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSDVAIL*PMLINN Trigger: GTTGTTTATTAACATTGGCCACAGGATAGCAACGTC...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR GCA 72 bp | GGGGATCCAACTCAAGTCTCTAGACTTGGTGGCAAGTaGCATCTCAGTGGCTGTCTTCCCCAGGGCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GDPTQVSRLGGK*HLSGCLPQGFR Trigger: CCTGAAGCCCTGGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTGGATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | CCAGGGTACCTGGGTTCGATTCCAGCACCCACATGGTaGATCACAATCCTCTGTAACTCCAGTCCCAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGYLGSIPAPTW*ITILCNSSPRG Trigger: TCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGGAATCGAACCCAGGTACCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCACCCACATGGTGGATCACAATCCTCTGTAACTCCAGTCCCAGGGGATCTCTGACCTTGAACCCCTaGATCCTCCTGCCTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: PAPTWWITILCNSSPRGSLTLNP*ILLPLP Trigger: AGGTAGAGGCAGGAGGATCAAGGGGTTCAAGGTCAG...AGATCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCTGCAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGCTGACCTTGAACCCCTaGATCCTCCTGCCTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: SAADVLPTEADGTSQERRLTLNP*ILLPLP Trigger: AGGTAGAGGCAGGAGGATCAAGGGGTTCAAGGTCAG...CCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | CTTCCAGGGTACCTGGGTTCGATTCCAGCACCCACATaGTGGATCACAATCCTCTGTAACTCCAGTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPGYLGSIPAPT*WITILCNSSPR Trigger: CCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGGAATCGAACCCAGGTACCCTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR TCA 72 bp | TGTGCTCAGAAAGACAGGCCAGGCACAAGGAGTCTCTaGCAAATGCTGGGGTGCACTGGGATCAATTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: CAQKDRPGTRSL*QMLGCTGINWI Trigger: GATCCAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCTGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 72 bp | GCAAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTaGCCAGATCCCAAACTCTCTCTACACGGAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ARAKQELFSASI*PDPKLSLHGGW Trigger: CCAGCCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 72 bp | CTGCAGTGTCCAGTTCTCTCAGGGGCTATGGGCACTTaGTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LQCPVLSGAMGT*WFLVSVCSLFS Trigger: AGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTGGACACTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCACCCACATGGTGGATCACAATCCTCTGTAACTCCAGTCCCAGGGGATCTGTGCACTGGGATCAATaGGATCACAATACTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PAPTWWITILCNSSPRGSVHWDQ*DHNTSL Trigger: GAGAGAAGTATTGTGATCCAATTGATCCCAGTGCAC...AGATCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTTGGAGTTACAACCTGTaGTCACTGCTGGAGGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TFYQQRQMGLARKDGWNIWSYNL*SLLEGQ Trigger: TTGGCCCTCCAGCAGTGACAACAGGTTGTAACTCCA...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 72 bp | TATAAAGCCAAGACCCTGCAAACACTAGCTGCAGTGTaGCTGAACATGTGCTCAGAAAGACAGGCCAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: YKAKTLQTLAAV*LNMCSERQARH Trigger: GTGCCTGGCCTGTCTTTCTGAGCACATGTTCAGGCACACTGCAGCTAGTGTTTGCAGGGTCTTGGCTTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 72 bp | TTTCCAGATAGACATCCCTCTTCCAGGTCTGCTCTGTaGATAATGCTCAAGGTTGGCCTGCAGTGTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FPDRHPSSRSAL*IMLKVGLQCPV Trigger: AACTGGACACTGCAGGCCAACCTTGAGCATTATGCACAGAGCAGACCTGGAAGAGGGATGTCTATCTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | AAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTaGGGTGCACTGGGATCAATTGGATCACAATACTTC | + |
|
Preference number: 3 (lower is better) Translates to: KTGQAQGVSDKC*GALGSIGSQYF Trigger: GAAGTATTGTGATCCAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | CAGTTCTCTCAGGGGCTATGGGCACTTGCTGGTTCCTaGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: QFSQGLWALAGS*FQSAACFLERY Trigger: ATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCAAGTGCCCATAGCCCCTGAGAGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTGTGCACTGGGATCAATaGGATCACAATACTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TFYQQRQMGLARKDGWNIVHWDQ*DHNTSL Trigger: GAGAGAAGTATTGTGATCCAATTGATCCCAGTGCAC...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | TCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTTaGTCCAATACTTCAGTTTGTCCTGGTCACCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLYTEAGELDLC*SNTSVCPGHPL Trigger: GAGAGGGTGACCAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | TCTGTAGTGGGATCTTATGCCCCCTTCCGGTGTGTCTaGAGACAGCAACAGTGTACTCATATACCTAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SVVGSYAPFRCV*RQQQCTHIPKG Trigger: TCCTTTAGGTATATGAGTACACTGTTGCTGTCTTCAGACACACCGGAAGGGGGCATAAGATCCCACTACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | GTTGTCACTGCTGGAGGGCCAATAAACCTTGTCATCTaGTGGCTGCAAACCATGCATGTAGCAATAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: VVTAGGPINLVI*WLQTMHVAIDA Trigger: AGCATCTATTGCTACATGCATGGTTTGCAGCCATCAGATGACAAGGTTTATTGGCCCTCCAGCAGTGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | GGATATCTGATATGTGACTCCTGTGAAAGGGTCATTTaGCCCGAAAGGGGTGGAGACCAACAGGTTAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GYLICDSCERVI*PERGGDQQVKN Trigger: GTTCTTAACCTGTTGGTCTCCACCCCTTTCGGGTCAAATGACCCTTTCACAGGAGTCACATATCAGATATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR GCA 72 bp | TACTTCAGTTTGTCCTGGTCACCCTCTCCAGTTTACTaGAGATTACCCCCTTTGCCTACACAGGAACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: YFSLSWSPSPVY*RLPPLPTQEHK Trigger: TTTGTGTTCCTGTGTAGGCAAAGGGGGTAATCTGCAGTAAACTGGAGAGGGTGACCAGGACAAACTGAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 72 bp | CCAGGGCTTCAGGAAGATCTTCATCTCTCCCATATGTaGGGCCTTTCATTTCCTAGTTTGAGACTAAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PGLQEDLHLSHM*GLSFPSLRLRL Trigger: CAACCTTAGTCTCAAACTAGGAAATGAAAGGCCGCACATATGGGAGAGATGAAGATCTTCCTGAAGCCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | AGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTaGGATCAATTGGATCACAATACTTCTCTCCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: RHKESLTNAGVH*DQLDHNTSLHS Trigger: TGAATGGAGAGAAGTATTGTGATCCAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTAAAAGTGATGCTGGGCTaGAAACTAGGGTGTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: ISGFHCLALDVAILWPMLKVMLG*KLGCHT Trigger: TGTGTGACACCCTAGTTTCAAGCCCAGCATCACTTT...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | ATTGGCCCCAGTGTCAAAAGCAAGAACAGGCTGCTGTaGATTAGTGACAAATCGAGTCAGACATTATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IGPSVKSKNRLL*ISDKSSQTLSG Trigger: CCCTGATAATGTCTGACTCGATTTGTCACTAATTCACAGCAGCCTGTTCTTGCTTTTGACACTGGGGCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR GCA 72 bp | GTAGTCTGTATTGTCATAACATGCAAATCTGTTCTCTaGTGCAGACGTTCTACCAACAGAGGCAGATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VVCIVITCKSVL*CRRSTNRGRWD Trigger: GTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGAGAACAGATTTGCATGTTATGACAATACAGACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | ATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGCTaGAGAATTGGATTTGTGTTGATCCAATACTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ICPDPKLSLHGG*RIGFVLIQYFS Trigger: ACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | ATTAGTGACAAATCGAGTCAGACATTATCAGGGGTCTaGCGATGTGCCTGTTATAAAGCCAAGACCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ISDKSSQTLSGV*RCACYKAKTLQ Trigger: TTGCAGGGTCTTGGCTTTATAACAGGCACATCGTCAGACCCCTGATAATGTCTGACTCGATTTGTCACTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | GCCACTCTTGCTAAAATAGTTTCTCAAATGGTAGGATaGGCAAGTGGAGTTACAACCTGTTGTCACTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ATLAKIVSQMVG*ASGVTTCCHCW Trigger: CCAGCAGTGACAACAGGTTGTAACTCCACTTGCTCATCCTACCATTTGAGAAACTATTTTAGCAAGAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | ATTGGATTTGTGTTGATCCAATACTTCAGTTTGTCCTaGTCACCCTCTCCAGTTTACTGCAGATTACCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: IGFVLIQYFSLS*SPSPVYCRLPP Trigger: AGGGGGTAATCTGCAGTAAACTGGAGAGGGTGACCAGGACAAACTGAAGTATTGGATCAACACAAATCCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | AGATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTaGATTTGTGTTGATCCAATACTTCAGTTTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSQTLSTRRLEN*ICVDPILQFVL Trigger: CAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | TGCTGGTTCCTGGTTTCAGTCTGCAGCTTGTTTTCTTaGACGTTATCTTACATGTCTTTCTCTCCAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: CWFLVSVCSLFS*TLSYMSFSPNI Trigger: AATGTTTGGAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCAGGAACCAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR TCA 72 bp | AGGTGTAAGATCTTTGCCTCCCTGGTAATTGTCTTTTaGTACAGTAGTCAGATGTTCCAAATCTTCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RCKIFASLVIVF*YSSQMFQIFPK Trigger: CTTTGGGAAGATTTGGAACATCTGACTACTGTATCAAAAGACAATTACCAGGGAGGCAAAGATCTTACACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| 3UTR GCA 72 bp | ATAATATATTTATCCTGGTTCATTTCTGGATTTCACTaGTTAGCTCTGGACGTTGCTATCCTGTGGCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: IIYLSWFISGFH*LALDVAILWPM Trigger: CATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAATGAACCAGGATAAATATATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CCA 72 bp | GGAAGACTAGATAATATATTTATCCTGGTTCATTTCTaGATTTCACTGCTTAGCTCTGGACGTTGCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRLDNIFILVHF*ISLLSSGRCYP Trigger: AGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAATGAACCAGGATAAATATATTATCTAGTCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCTGCAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGTCCATCTGCAGCCCATaGCGCAGGCAGAGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAADVLPTEADGTSQERRSICSP*RRQRRA Trigger: CGCTCTCCTCTGCCTGCGGCATGGGCTGCAGATGGA...CCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATCAATTGGGCAGCTGTGATACCTaGGAGGGCTCCTCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QARHKESLTNAGVHWDQLGSCDT*EGSSGS Trigger: TGAGCCTGAGGAGCCCTCTCAGGTATCACAGCTGCC...CAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGACAAAGGTCGTATATCTaGTGGGGGCGGTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKTGQAQGVSDKCWGALGQRSYI*WGRWGW Trigger: CCAGCCCCACCGCCCCCACCAGATATACGACCTTTG...TCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGCAAAGGTCGTATATCTaGTGGGGGCGGTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAADVLPTEADGTSQERRQRSYI*WGRWGW Trigger: CCAGCCCCACCGCCCCCACCAGATATACGACCTTTG...CCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCGGACCTCTGCCTGCCTaGTCCTTAGAGAGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QLKSLDLVASAISVAVFPGPLPA*SLERPL Trigger: CAGTGGCCTCTCTAAGGAGCAGGCAGGCAGAGGTCC...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCTCAGCTTCCTGCAGCTaGTGGTGGGCTGCCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QLKSLDLVASAISVAVFPSASCS*WWAAQY Trigger: GTACTGGGCAGCCCACCAGCAGCTGCAGGAAGCTGA...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | GTAACTACCCCACCGCCCTTCTCCTCTGACTCACTGTTATGTTTCAAAACAGAGCTCCGGACGGAGCACTaGAGGCCTCTCCTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTTPPPFSSDSLLCFKTELRTEH*RPLLWG Trigger: CCCCCACAGGAGAGGCCTCCAGTGCTCCGTCCGGAG...CTCTGTTTTGAAACATAACAGTGAGTCAGAGGAGAAGGGCGGTGGGGTAGTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGAATTCAGTGGCAGCTGTaGTACCTGAGAGGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTGQAQGVSDKCWGALGIQWQL*YLRGLL Trigger: GAGGAGCCCTCTCAGGTATCACAGCTGCCACTGAAT...TCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCTGCAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGTTTACCTTCTCCATCTaGAGCCCATGCCGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAADVLPTEADGTSQERRFTFSI*SPCRRQ Trigger: CTGCCTGCGGCATGGGCTGCAGATGGAGAAGGTAAA...CCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGGTCTTTCCACATGACTaGTCAGGACCTCTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAADVLPTEADGTSQERRVFPHD*SGPLPA Trigger: GGCAGGCAGAGGTCCTGACCAGTCATGTGGAAAGAC...CCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGTCCTGCAGCTGCTGGTaGGCTGCCCAGTACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RALFSQYLPRSQTLSTRRSCSCW*AAQYFS Trigger: GGAGAAGTACTGGGCAGCCCACCAGCAGCTGCAGGA...CCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATCAATTGCTGGTTTGGATGGCTTaGGTCCACACAAGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QARHKESLTNAGVHWDQLLVWMA*VHTSCS Trigger: GCTACAGCTTGTGTGGACTCAAGCCATCCAAACCAG...CAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATCAATTGGTGTCACCAAACCATTaGATGATCTCCGGGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QARHKESLTNAGVHWDQLVSPNH*MISGRG Trigger: ACCTCGCCCGGAGATCATTCAATGGTTTGGTGACAC...CAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | CCAGCACCCACATGGTGGATCACAATCCTCTGTAACTCCAGTCCCAGGGGATCTACAGACAAGCCCTGCTaGAGAGCTGTTGAGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAPTWWITILCNSSPRGSTDKPC*RAVETA Trigger: AGCAGTCTCAACAGCTCTGCAGCAGGGCTTGTCTGT...AGATCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR GCA 90 bp | CCAGCACCCACATGGTGGATCACAATCCTCTGTAACTCCAGTCCCAGGGGATCTGGGGGCCTCACTGACTaGTGTGTGAAAGAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAPTWWITILCNSSPRGSGGLTD*CVKERR Trigger: TCTTCTCTCTTTCACACAGCAGTCAGTGAGGCCCCC...AGATCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR GCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTGTCAGGACCTCTGCCTaGCTGCTCCTTAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGTSQERRMEHFQIDIPLVRTSA*LLLREA Trigger: GGCCTCTCTAAGGAGCAGGCAGGCAGAGGTCCTGAC...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCTCCTGCAGCTGCTGGTaGGCTGCCCAGTACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLSCSCW*AAQYFS Trigger: GGAGAAGTACTGGGCAGCCCACCAGCAGCTGCAGGA...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 72 bp | AAGTTAGTCCTGGGGATCCAACTCAAGTCTCTAGACTaGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLVLGIQLKSLD*VASAISVAVFP Trigger: GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTGGATCCCCAGGACTAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGGAGACAGACAAGCCCTaGTGCAGAGCTGTTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RALFSQYLPRSQTLSTRRETDKP*CRAVET Trigger: AGTCTCAACAGCTCTGCAGCAGGGCTTGTCTGTCTC...CCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | CCAGCACCCACATGGTGGATCACAATCCTCTGTAACTCCAGTCCCAGGGGATCTGATATCTGCCAGGCTTaGATAGGGGAAGTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAPTWWITILCNSSPRGSDICQA*IGEVAE Trigger: TTCAGCTACTTCCCCTATCCAAGCCTGGCAGATATC...AGATCCCCTGGGACTGGAGTTACAGAGGATTGTGATCCACCATGTGGGTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR CCA 90 bp | AGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGACCATTAGCCAATGCCTaGAAAGAGGGAGAAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKTGQAQGVSDKCWGALGPLANA*KEGEEV Trigger: TACCTCTTCTCCCTCTTTCCAGGCATTGGCTAATGG...TCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTATACAACCCAAAGGCTaGAGGGGCTTAGGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFYQQRQMGLARKDGWNIIQPKG*RGLGVA Trigger: TGCCACCCCTAAGCCCCTCCAGCCTTTGGGTTGTAT...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCAGACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGCTGGTGTTGCATATCTaGGGAAAGGTATTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAADVLPTEADGTSQERRLVLHI*GKVFCG Trigger: CCCACAGAATACCTTTCCCCAGATATGCAACACCAG...CCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGTCTGCAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATCAATTGTCTCGTCGTGCCCATTaGCACTGTAGGAAAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QARHKESLTNAGVHWDQLSRRAH*HCRKKD Trigger: ATCCTTTTTCCTACAGTGCCAATGGGCACGACGAGA...CAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATTCCTCACCATCTTCTaGCAGTTCATCCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RKTGQAQGVSDKCWGALGFLTIF*QFILLI Trigger: GATGAGGAGGATGAACTGCCAGAAGATGGTGAGGAA...TCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGAAAGATCCTGACAGTCTaGTTGGTGGGAGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTGQAQGVSDKCWGALGKILTV*LVGECS Trigger: AGAACATTCTCCCACCAATCAGACTGTCAGGATCTT...TCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCGGAATGGCTGGATCTTaGAAACTAGGGGTACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLKSLDLVASAISVAVFPGMAGS*KLGVPS Trigger: ACTTGGTACCCCTAGTTTTCAAGATCCAGCCATTCC...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTAGTCAGGACCTCTGCCTaGCTGCTCCTTAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISGFHCLALDVAILWPMLVRTSA*LLLREA Trigger: GGCCTCTCTAAGGAGCAGGCAGGCAGAGGTCCTGAC...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTATCAGCTTCCTGCAGCTaGTGGTGGGCTGCCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISGFHCLALDVAILWPMLSASCS*WWAAQY Trigger: GTACTGGGCAGCCCACCAGCAGCTGCAGGAAGCTGA...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGGCTCACTGGTTTGGATaGCTTGAGTCCACACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RALFSQYLPRSQTLSTRRAHWFG*LESTQA Trigger: AGCTTGTGTGGACTCAAGCCATCCAAACCAGTGAGC...CCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATCAATTGAGAGGTAGAGGAAGATaGAGGTATTCCACTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QARHKESLTNAGVHWDQLRGRGR*RYSTRF Trigger: GAACCTAGTGGAATACCTCCATCTTCCTCTACCTCT...CAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AACACTGCTCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCCATTAGCCAATGCCTaGAAAGAGGGAGAAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTALPEVLSAIPINPMVAPLANA*KEGEEV Trigger: TACCTCTTCTCCCTCTTTCCAGGCATTGGCTAATGG...AGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGAGCAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCATACAACCCAAAGGCTaGAGGGGCTTAGGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLIQPKG*RGLGVA Trigger: TGCCACCCCTAAGCCCCTCCAGCCTTTGGGTTGTAT...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCCTGGTGTTGCATATCTaGGGAAAGGTATTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLKSLDLVASAISVAVFPLVLHI*GKVFCG Trigger: CCCACAGAATACCTTTCCCCAGATATGCAACACCAG...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCCGCTTAGTCTTTCGCTaGTGTTGCATATCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLKSLDLVASAISVAVFPRLVFR*CCISGE Trigger: TTCCCCAGATATGCAACACCAGCGAAAGACTAAGCG...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AACACTGCTCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCGCTTAGTCTTTCGCTaGTGTTGCATATCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTALPEVLSAIPINPMVARLVFR*CCISGE Trigger: TTCCCCAGATATGCAACACCAGCGAAAGACTAAGCG...AGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGAGCAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCCTGGTTTGGATGGCTTaGGTCCACACAAGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLLVWMA*VHTSCS Trigger: GCTACAGCTTGTGTGGACTCAAGCCATCCAAACCAG...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTGCTGTGAATTAGTGACAAATCGAGTCAGACATTATCAGGGGTCTGACATTCAGTGGCAGCTGTaGTACCTGAGAGGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGCCELVTNRVRHYQGSDIQWQL*YLRGLL Trigger: GAGGAGCCCTCTCAGGTATCACAGCTGCCACTGAAT...GTCAGACCCCTGATAATGTCTGACTCGATTTGTCACTAATTCACAGCAGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGTGGACAGCTGTGAAGTaGTTCCAGGAAGCAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RALFSQYLPRSQTLSTRRWTAVK*FQEAVF Trigger: AAAGACTGCTTCCTGGAATCACTTCACAGCTGTCCA...CCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | GTAACTACCCCACCGCCCTTCTCCTCTGACTCACTGTTATGTTTCAAAACAGAGGCTGATGGACAGCTGTaGAGTGATTCCAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTTPPPFSSDSLLCFKTEADGQL*SDSRKQ Trigger: CTGCTTCCTGGAATCACTTCACAGCTGTCCATCAGC...CTCTGTTTTGAAACATAACAGTGAGTCAGAGGAGAAGGGCGGTGGGGTAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCGAGACAGACAAGCCCTaGTGCAGAGCTGTTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLETDKP*CRAVET Trigger: AGTCTCAACAGCTCTGCAGCAGGGCTTGTCTGTCTC...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTGGTGGGAGAATGTTCTaGTGCCCATCATCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGTSQERRMEHFQIDIPLGGRMF*CPSSEA Trigger: AGCCTCTGATGATGGGCAGCAGAACATTCTCCCACC...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCAGTCTTTCGCTGGTGTTaGATATCTGGGGAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSRGPECNSHQPHGGSQPVFRWC*ISGERY Trigger: ATACCTTTCCCCAGATATGCAACACCAGCGAAAGAC...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCAACAAACTACCACTTCTaGTGGCTTAGGCAATCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSRGPECNSHQPHGGSQPTNYHF*WLRQSR Trigger: TCTCGATTGCCTAAGCCAGCAGAAGTGGTAGTTTGT...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTGCTCACTGGTTTGGATaGCTTGAGTCCACACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFYQQRQMGLARKDGWNIAHWFG*LESTQA Trigger: AGCTTGTGTGGACTCAAGCCATCCAAACCAGTGAGC...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCAAGAGGTAGAGGAAGATaGAGGTATTCCACTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRGPECNSHQPHGGSQPRGRGR*RYSTRF Trigger: GAACCTAGTGGAATACCTCCATCTTCCTCTACCTCT...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AACACTGCTCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTAGGTGTAGGAATGGCTaGATCTTGAAAACTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTALPEVLSAIPINPMVARCRNG*ILKTRG Trigger: ACCCCTAGTTTTCAAGATCCAGCCATTCCTACACCT...AGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGAGCAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCAGGCGAGGTAAACCAGTaGTCTGTTCTAATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRGPECNSHQPHGGSQPGEVNQ*SVLIYG Trigger: ACCATAAATTAGAACAGATCACTGGTTTACCTCGCC...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | GATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTTGATCCAAACAGACAAGCCCTGCTaGAGAGCTGTTGAGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPKLSLHGGWRIGFVLIQTDKPC*RAVETA Trigger: AGCAGTCTCAACAGCTCTGCAGCAGGGCTTGTCTGT...TTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTATTTACCTTCTCCATCTaGAGCCCATGCCGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISGFHCLALDVAILWPMLFTFSI*SPCRRQ Trigger: CTGCCTGCGGCATGGGCTGCAGATGGAGAAGGTAAA...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | GATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTTGATCCAAGGGGGCCTCACTGACTaGTGTGTGAAAGAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPKLSLHGGWRIGFVLIQGGLTD*CVKERR Trigger: TCTTCTCTCTTTCACACAGCAGTCAGTGAGGCCCCC...TTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 72 bp | GAGTCTCTGACAAATGCTGGGGTGCACTGGGATCAATaGGATCACAATACTTCTCTCCATTCAGGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESLTNAGVHWDQ*DHNTSLHSGSL Trigger: CAGGGAACCTGAATGGAGAGAAGTATTGTGATCCAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTAGGAGACGTTGGGCCATaGACCAGGTCTTTACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISGFHCLALDVAILWPMLGDVGP*TRSLPS Trigger: AGAAGGTAAAGACCTGGTTCATGGCCCAACGTCTCC...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTTGGACAGCTGTGAAGTaGTTCCAGGAAGCAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DGTSQERRMEHFQIDIPLWTAVK*FQEAVF Trigger: AAAGACTGCTTCCTGGAATCACTTCACAGCTGTCCA...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | GTAACTACCCCACCGCCCTTCTCCTCTGACTCACTGTTATGTTTCAAAACAGAGTTTCAAGGAACGAGTTaGAGGTGTAGGAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTTPPPFSSDSLLCFKTEFQGTS*RCRNGW Trigger: CCAGCCATTCCTACACCTTCAACTCGTTCCTTGAAA...CTCTGTTTTGAAACATAACAGTGAGTCAGAGGAGAAGGGCGGTGGGGTAGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTTTTCAAGGAACGAGTTaGAGGTGTAGGAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGTSQERRMEHFQIDIPLFQGTS*RCRNGW Trigger: CCAGCCATTCCTACACCTTCAACTCGTTCCTTGAAA...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCGATATCTGCCAGGCTTaGATAGGGGAAGTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLDICQA*IGEVAE Trigger: TTCAGCTACTTCCCCTATCCAAGCCTGGCAGATATC...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTCAAAGGTCGTATATCTaGTGGGGGCGGTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSQRSYI*WGRWGW Trigger: CCAGCCCCACCGCCCCCACCAGATATACGACCTTTG...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTTCCTGCAGCTGCTGGTaGGCTGCCCAGTACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSSCSCW*AAQYFS Trigger: GGAGAAGTACTGGGCAGCCCACCAGCAGCTGCAGGA...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CCA 90 bp | GTAACTACCCCACCGCCCTTCTCCTCTGACTCACTGTTATGTTTCAAAACAGAGAACTACCACTTCTGCTaGCTTAGGCAATCGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTTPPPFSSDSLLCFKTENYHFC*LRQSRV Trigger: GACTCTCGATTGCCTAAGCCAGCAGAAGTGGTAGTT...CTCTGTTTTGAAACATAACAGTGAGTCAGAGGAGAAGGGCGGTGGGGTAGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | GATGGGACTAGCCAGGAAAGACGGATGGAACATTTCCAGATAGACATCCCTCTTAAGAGAGAAGAGACTTaGAAAGGAGCTGATCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGTSQERRMEHFQIDIPLKREET*KGADLG Trigger: ACCGAGATCAGCTCCTTTTCAAGTCTCTTCTCTCTT...AAGAGGGATGTCTATCTGGAAATGTTCCATCCGTCTTTCCTGGCTAGTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCAAGATCCTGACAGTCTaGTTGGTGGGAGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLKILTV*LVGECS Trigger: AGAACATTCTCCCACCAATCAGACTGTCAGGATCTT...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | CATGGTCCTTCTGTCCACAAGACAGATCCTATAAAGAGGGAAACATCTCTTGTTGCTGATGGACAGCTGTaGAGTGATTCCAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGPSVHKTDPIKRETSLVADGQL*SDSRKQ Trigger: CTGCTTCCTGGAATCACTTCACAGCTGTCCATCAGC...AACAAGAGATGTTTCCCTCTTTATAGGATCTGTCTTGTGGACAGAAGGACCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTGCTGTGAATTAGTGACAAATCGAGTCAGACATTATCAGGGGTCTGACGGAATGGCTGGATCTTaGAAACTAGGGGTACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGCCELVTNRVRHYQGSDGMAGS*KLGVPS Trigger: ACTTGGTACCCCTAGTTTTCAAGATCCAGCCATTCC...GTCAGACCCCTGATAATGTCTGACTCGATTTGTCACTAATTCACAGCAGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCCATTTCAGCTGTCCATaGTTCAAGGCATATCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLHFSCP*FKAYRV Trigger: CACACGATATGCCTTGAAGCATGGACAGCTGAAATG...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCAGGTGTAGGAATGGCTaGATCTTGAAAACTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLRCRNG*ILKTRG Trigger: ACCCCTAGTTTTCAAGATCCAGCCATTCCTACACCT...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTGCTGTGAATTAGTGACAAATCGAGTCAGACATTATCAGGGGTCTGACGTAGAGGTGGTGTCTTaGCCCATTCTTTCAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TGCCELVTNRVRHYQGSDVEVVS*PILSRN Trigger: GTTCCTTGAAAGAATGGGCCAAGACACCACCTCTAC...GTCAGACCCCTGATAATGTCTGACTCGATTTGTCACTAATTCACAGCAGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 72 bp | CTCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTaGATCCAATACTTCAGTTTGTCCTGGTCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLHGGWRIGFV*IQYFSLSWSPS Trigger: AGAGGGTGACCAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCAGGCAGCTGTGATACCTaGGAGGGCTCCTCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSGSCDT*EGSSGS Trigger: TGAGCCTGAGGAGCCCTCTCAGGTATCACAGCTGCC...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAAAGCAAGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCGGCGAGGTAAACCAGTaGTCTGTTCTAATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSKARALFSQYLPRSQTLGEVNQ*SVLIYG Trigger: ACCATAAATTAGAACAGATCACTGGTTTACCTCGCC...GAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCTTGCTTTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCAGGACCTCTGCCTGCCTaGTCCTTAGAGAGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSGPLPA*SLERPL Trigger: CAGTGGCCTCTCTAAGGAGCAGGCAGGCAGAGGTCC...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR GCA 90 bp | GATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTTGATCCAAAGGGGTACCAAGTACTaGATTGTCCCGAAACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DPKLSLHGGWRIGFVLIQRGTKY*IVPKPF Trigger: AAATGGTTTCGGGACAATGCAGTACTTGGTACCCCT...TTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | ACAGGCTGCTGTGAATTAGTGACAAATCGAGTCAGACATTATCAGGGGTCTGACAGGGGTACCAAGTACTaGATTGTCCCGAAACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TGCCELVTNRVRHYQGSDRGTKY*IVPKPF Trigger: AAATGGTTTCGGGACAATGCAGTACTTGGTACCCCT...GTCAGACCCCTGATAATGTCTGACTCGATTTGTCACTAATTCACAGCAGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCATCAGCTTCCTGCAGCTaGTGGTGGGCTGCCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPSASCS*WWAAQY Trigger: GTACTGGGCAGCCCACCAGCAGCTGCAGGAAGCTGA...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCGTCTTTCCACATGACTaGTCAGGACCTCTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WFQSAACFLERYLTCLSLVFPHD*SGPLPA Trigger: GGCAGGCAGAGGTCCTGACCAGTCATGTGGAAAGAC...GAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTATCTCGTCGTGCCCATTaGCACTGTAGGAAAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISGFHCLALDVAILWPMLSRRAH*HCRKKD Trigger: ATCCTTTTTCCTACAGTGCCAATGGGCACGACGAGA...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTAGTAGAGGTGGTGTCTTaGCCCATTCTTTCAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISGFHCLALDVAILWPMLVEVVS*PILSRN Trigger: GTTCCTTGAAAGAATGGGCCAAGACACCACCTCTAC...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTGGAGACGTTGGGCCATaGACCAGGTCTTTACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSGDVGP*TRSLPS Trigger: AGAAGGTAAAGACCTGGTTCATGGCCCAACGTCTCC...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTGTGTCACCAAACCATTaGATGATCTCCGGGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSVSPNH*MISGRG Trigger: ACCTCGCCCGGAGATCATTCAATGGTTTGGTGACAC...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| 3UTR CAA 72 bp | CATCTCTCCCATATGTGCGGCCTTTCATTTCCTAGTTaGAGACTAAGGTTGCAAAAATCCTTAGCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSHMCGLSFPS*RLRLQKSLASC Trigger: GCATGAGGCTAAGGATTTTTGCAACCTTAGTCTCAAACTAGGAAATGAAAGGCCGCACATATGGGAGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | CATGGTCCTTCTGTCCACAAGACAGATCCTATAAAGAGGGAAACATCTCTTGTTGTCTTTCGCTGGTGTTaGATATCTGGGGAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HGPSVHKTDPIKRETSLVVFRWC*ISGERY Trigger: ATACCTTTCCCCAGATATGCAACACCAGCGAAAGAC...AACAAGAGATGTTTCCCTCTTTATAGGATCTGTCTTGTGGACAGAAGGACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| 3UTR CAA 72 bp | ATGTGCGGCCTTTCATTTCCTAGTTTGAGACTAAGGTaGCAAAAATCCTTAGCCTCATGCTTTGGCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MCGLSFPSLRLR*QKSLASCFGIG Trigger: TCCTATGCCAAAGCATGAGGCTAAGGATTTTTGCAACCTTAGTCTCAAACTAGGAAATGAAAGGCCGCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTGTCACCAAACCATTaGATGATCTCCGGGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPVSPNH*MISGRG Trigger: ACCTCGCCCGGAGATCATTCAATGGTTTGGTGACAC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR TCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTTTTCAAGGAACGAGTTaGAGGTGTAGGAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSFQGTS*RCRNGW Trigger: CCAGCCATTCCTACACCTTCAACTCGTTCCTTGAAA...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGGTGGGAGAATGTTCTaGTGCCCATCATCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPGGRMF*CPSSEA Trigger: AGCCTCTGATGATGGGCAGCAGAACATTCTCCCACC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCAGTCTGCAGCTTGTTTTCTTGAACGTTATCTTACATGTCTTTCTCTCGGTTCCATTAGCCAATaGCTGGAAAGAGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WFQSAACFLERYLTCLSLGSISQ*LERGRR Trigger: TCTTCTCCCTCTTTCCAGGCATTGGCTAATGGAACC...GAGAGAAAGACATGTAAGATAACGTTCAAGAAAACAAGCTGCAGACTGAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTAACTACCACTTCTGCTaGCTTAGGCAATCGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSNYHFC*LRQSRV Trigger: GACTCTCGATTGCCTAAGCCAGCAGAAGTGGTAGTT...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTGACAGATCCATCTTCTaGCAGTTCATCCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSDRSIF*QFILLI Trigger: GATGAGGAGGATGAACTGCCAGAAGATGGATCTGTC...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176259.3 |
||
| 3UTR CAA 72 bp | TGGAGAATTGGATTTGTGTTGATCCAATACTTCAGTTaGTCCTGGTCACCCTCTCCAGTTTACTGCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: WRIGFVLIQYFS*SWSPSPVYCRL Trigger: TAATCTGCAGTAAACTGGAGAGGGTGACCAGGACAAACTGAAGTATTGGATCAACACAAATCCAATTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR GCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTCATTTCAGCTGTCCATaGTTCAAGGCATATCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSHFSCP*FKAYRV Trigger: CACACGATATGCCTTGAAGCATGGACAGCTGAAATG...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTAGGGGTACCAAGTACTaGATTGTCCCGAAACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSRGTKY*IVPKPF Trigger: AAATGGTTTCGGGACAATGCAGTACTTGGTACCCCT...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTACAAACTACCACTTCTaGTGGCTTAGGCAATCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLALYFQMTNQLLPVIPSTNYHF*WLRQSR Trigger: TCTCGATTGCCTAAGCCAGCAGAAGTGGTAGTTTGT...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR TCA 90 bp | AGTAGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATTCAATCCTTTCATATaGGTGGGCTGCTCACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQMFQIFPKFLRYFTSSFNPFI*VGCSLG Trigger: GCCTAGTGAGCAGCCCACTCATATGAAAGGATTGAA...TGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCATTCAATCCTTTCATATaGGTGGGCTGCTCACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPFNPFI*VGCSLG Trigger: GCCTAGTGAGCAGCCCACTCATATGAAAGGATTGAA...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGGAATGGCTGGATCTTaGAAACTAGGGGTACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPGMAGS*KLGVPS Trigger: ACTTGGTACCCCTAGTTTTCAAGATCCAGCCATTCC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGGTTCCATTAGCCAATaGCTGGAAAGAGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPGSISQ*LERGRR Trigger: TCTTCTCCCTCTTTCCAGGCATTGGCTAATGGAACC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAGAGGTGGTGTCTTaGCCCATTCTTTCAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPVEVVS*PILSRN Trigger: GTTCCTTGAAAGAATGGGCCAAGACACCACCTCTAC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CCA 90 bp | AGTAGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCAAACTACCACTTCTGCTaGCTTAGGCAATCGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSQMFQIFPKFLRYFTSSNYHFC*LRQSRV Trigger: GACTCTCGATTGCCTAAGCCAGCAGAAGTGGTAGTT...TGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR CCA 90 bp | AGTAGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATTCCTCACCATCTTCTaGCAGTTCATCCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSQMFQIFPKFLRYFTSSFLTIF*QFILLI Trigger: GATGAGGAGGATGAACTGCCAGAAGATGGTGAGGAA...TGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCACATTTCAGCTGTCCATaGTTCAAGGCATATCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPHFSCP*FKAYRV Trigger: CACACGATATGCCTTGAAGCATGGACAGCTGAAATG...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAACAAACTACCACTTCTaGTGGCTTAGGCAATCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPTNYHF*WLRQSR Trigger: TCTCGATTGCCTAAGCCAGCAGAAGTGGTAGTTTGT...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAAGGTGTAGGAATGGCTaGATCTTGAAAACTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPRCRNG*ILKTRG Trigger: ACCCCTAGTTTTCAAGATCCAGCCATTCCTACACCT...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGGCGAGGTAAACCAGTaGTCTGTTCTAATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSNLGLALYFQMTNQLLPGEVNQ*SVLIYG Trigger: ACCATAAATTAGAACAGATCACTGGTTTACCTCGCC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| 3UTR CAA 72 bp | TTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATaGTTACCAGTAATTCCCAGTTCTAGAACATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLALYFQMTNQ*LPVIPSSRTSL Trigger: CAATGATGTTCTAGAACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS GCA 90 bp | GTGGGCTGCTCACTAGGCGCCAGAGGACTCAGTCCAAGAGCAACCTaGTCCGGACGGAGCACTGGAGGCCTCTCCTGTGGGGGCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VGCSLGARGLSPRAT*SGRSTGGLSCGGLT Trigger: AGTGAGGCCCCCACAGGAGAGGCCTCCAGTGCTCCGTCCGGAGCAGGTTGCTCTTGGACTGAGTCCTCTGGCGCCTAGTGAGCAGCCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 90 bp | TGTAGCAGGTGCTCATTTCCATCCAGCTCACTGGTTTGGATGGCTTaGGTCCACACAAGCTGTAGCTCCTCTGAGACTGGCGGGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CSRCSFPSSSLVWMA*VHTSCSSSETGGRQ Trigger: CTGTCTCCCGCCAGTCTCAGAGGAGCTACAGCTTGTGTGGACTCAAGCCATCCAAACCAGTGAGCTGGATGGAAATGAGCACCTGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS CCA 90 bp | TCCTCTATCTCTTCAGATGACCAGCTAATGCCGCAGCGGAGACGTTaGGCCATGAACCAGGTCTTTACCTTCTCCATCTGCAGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSISSDDQLMPQRRR*AMNQVFTFSICSPC Trigger: GCATGGGCTGCAGATGGAGAAGGTAAAGACCTGGTTCATGGCCCAACGTCTCCGCTGCGGCATTAGCTGGTCATCTGAAGAGATAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS CCA 90 bp | GCCTTCTTACTAGGTGAGAGTGACTGTGAGATACAACCCAAAGGCTaGAGGGGCTTAGGGGTGGCAGTGGTTCCATTAGCCAATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AFLLGESDCEIQPKG*RGLGVAVVPLANAW Trigger: CCAGGCATTGGCTAATGGAACCACTGCCACCCCTAAGCCCCTCCAGCCTTTGGGTTGTATCTCACAGTCACTCTCACCTAGTAAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | AGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATGTGTCACCAAACCATaGAATGATCTCCGGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKTGQAQGVSDKCWGALGCVTKP*NDLRAR Trigger: CCTCGCCCGGAGATCATTCAATGGTTTGGTGACACA...TCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | CAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATCAATTGTGTGTCACCAAACCATaGAATGATCTCCGGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QARHKESLTNAGVHWDQLCVTKP*NDLRAR Trigger: CCTCGCCCGGAGATCATTCAATGGTTTGGTGACACA...CAATTGATCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 90 bp | GGCAGAGGAGAGCGATATCTGCCAGGCTTGGATAGGGGAAGTAGCTaGAGGCTTGTAGCAGGTGCTCATTTCCATCCAGCTCACTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRGERYLPGLDRGSS*RLVAGAHFHPAHWF Trigger: AAACCAGTGAGCTGGATGGAAATGAGCACCTGCTACAAGCCTTCAGCTACTTCCCCTATCCAAGCCTGGCAGATATCGCTCTCCTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCAGAGGTCCTGAGTGCAATTCCCATCAACCCCATGGTGGCTCACAACCAATCCAGCTCACTGGTTaGGATGGCTTGAGTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SSRGPECNSHQPHGGSQPIQLTG*DGLSPH Trigger: GTGTGGACTCAAGCCATCCAAACCAGTGAGCTGGAT...TGGTTGTGAGCCACCATGGGGTTGATGGGAATTGCACTCAGGACCTCTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 90 bp | TGCCTGCTCCTTAGAGAGGCCACTGATCTGAAGATCCTGACAGTCTaGTTGGTGGGAGAATGTTCTGCTGCCCATCATCAGAGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLLREATDLKILTV*LVGECSAAHHQRLL Trigger: AAGGAGCCTCTGATGATGGGCAGCAGAACATTCTCCCACCAATCAGACTGTCAGGATCTTCAGATCAGTGGCCTCTCTAAGGAGCAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 90 bp | CAAGTAATGAGACCGATGCGGGCTTATCTGGCTGATGGACAGCTGTaGAGTGATTCCAGGAAGCAGTCTTTCCACATGACTGGTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QVMRPMRAYLADGQL*SDSRKQSFHMTGQD Trigger: GTCCTGACCAGTCATGTGGAAAGACTGCTTCCTGGAATCACTTCACAGCTGTCCATCAGCCAGATAAGCCCGCATCGGTCTCATTACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | CAACTCAAGTCTCTAGACTTGGTGGCAAGTGCCATCTCAGTGGCTGTCTTCCCCAGTCTTTCGCTGGTGTaGCATATCTGGGGAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QLKSLDLVASAISVAVFPSLSLV*HIWGKV Trigger: TACCTTTCCCCAGATATGCAACACCAGCGAAAGACT...GGGGAAGACAGCCACTGAGATGGCACTTGCCACCAAGTCTAGAGACTTGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 90 bp | CTCACTGACTGCTGTGTGAAAGAGAGAAGAGACTTGAAAAGGAGCTaGTCTCGGTGGTACACCACTCTGGCACGAGTCTCCTCTATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTDCCVKERRDLKRS*SRWYTTLARVSSIS Trigger: AGAGATAGAGGAGACTCGTGCCAGAGTGGTGTACCACCGAGATCAGCTCCTTTTCAAGTCTCTTCTCTCTTTCACACAGCAGTCAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 90 bp | CATCATCAGAGGCTCCTTAGCGTTCTGATGATTCAGTGGCAGCTGTaGTACCTGAGAGGGCTCCTCAGGCTCAACCTTCAATCCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HHQRLLSVLMIQWQL*YLRGLLRLNLQSFH Trigger: ATGAAAGGATTGAAGGTTGAGCCTGAGGAGCCCTCTCAGGTATCACAGCTGCCACTGAATCATCAGAACGCTAAGGAGCCTCTGATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | AGAAAGACAGGCCAGGCACAAGGAGTCTCTGACAAATGCTGGGGTGCACTGGGATGTAGGAAAAAGGATTaGAGGATGGCCAACTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKTGQAQGVSDKCWGALGCRKKD*RMANCS Trigger: AGAACAGTTGGCCATCCTCAAATCCTTTTTCCTACA...TCCCAGTGCACCCCAGCATTTGTCAGAGACTCCTTGTGCCTGGCCTGTCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | ACGTTCTACCAACAGAGGCAGATGGGACTAGCCAGGAAAGACGGATGGAACATTGGTAGAGGTGGTGTCTaGGCCCATTCTTTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TFYQQRQMGLARKDGWNIGRGGV*AHSFKE Trigger: TTCCTTGAAAGAATGGGCCAAGACACCACCTCTACC...AATGTTCCATCCGTCTTTCCTGGCTAGTCCCATCTGCCTCTGTTGGTAGAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS CCA 90 bp | TCTGTGGGGCCAGCTGAATTTGGTTCTGAGTTATTCCATAGCCTTTaGGGCCAGAGTGGTTCTACTTGTGGAGACAGTGCCTTCTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: SVGPAEFGSELFHSL*GQSGSTCGDSAFLL Trigger: TAGTAAGAAGGCACTGTCTCCACAAGTAGAACCACTCTGGCCCCAAAGGCTATGGAATAACTCAGAACCAAATTCAGCTGGCCCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGGATTTCACTGCTTAGCTCTGGACGTTGCTATCCTGTGGCCAATGTTAATCCAGCTCACTGGTTaGGATGGCTTGAGTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ISGFHCLALDVAILWPMLIQLTG*DGLSPH Trigger: GTGTGGACTCAAGCCATCCAAACCAGTGAGCTGGAT...TAACATTGGCCACAGGATAGCAACGTCCAGAGCTAAGCAGTGAAATCCAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | AGAGCTCTTTTCAGCCAGTATCTGCCCAGATCCCAAACTCTCTCTACACGGAGGTGTAGGAAAAAGGATTaGAGGATGGCCAACTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RALFSQYLPRSQTLSTRRCRKKD*RMANCS Trigger: AGAACAGTTGGCCATCCTCAAATCCTTTTTCCTACA...CCTCCGTGTAGAGAGAGTTTGGGATCTGGGCAGATACTGGCTGAAAAGAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS GCA 90 bp | AGGTGTAGGAATGGCTGGATCTTGAAAACTAGGGGTACCAAGTACTaGATTGTCCCGAAACCATTTCAGCTGTCCATGCTTCAAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: RCRNGWILKTRGTKY*IVPKPFQLSMLQGI Trigger: TATGCCTTGAAGCATGGACAGCTGAAATGGTTTCGGGACAATGCAGTACTTGGTACCCCTAGTTTTCAAGATCCAGCCATTCCTACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CAA 90 bp | CATGGTCCTTCTGTCCACAAGACAGATCCTATAAAGAGGGAAACATCTCTTGTTCCTGCTGCAGAGCTGTaGAGACTGCTGGCATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HGPSVHKTDPIKRETSLVPAAEL*RLLASL Trigger: TAAAGATGCCAGCAGTCTCAACAGCTCTGCAGCAGG...AACAAGAGATGTTTCCCTCTTTATAGGATCTGTCTTGTGGACAGAAGGACCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | GATCCCAAACTCTCTCTACACGGAGGCTGGAGAATTGGATTTGTGTTGATCCAAGTACCAAGTACTGCATaGTCCCGAAACCATTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPKLSLHGGWRIGFVLIQVPSTA*SRNHFS Trigger: GCTGAAATGGTTTCGGGACAATGCAGTACTTGGTAC...TTGGATCAACACAAATCCAATTCTCCAGCCTCCGTGTAGAGAGAGTTTGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 90 bp | TTCAGCTGTCCATGCTTCAAGGCATATCGTGTGTCACCAAACCATTaGATGATCTCCGGGCGAGGTAAACCAGTGATCTGTTCTAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSCPCFKAYRVSPNH*MISGRGKPVICSNL Trigger: TAAATTAGAACAGATCACTGGTTTACCTCGCCCGGAGATCATTCAATGGTTTGGTGACACACGATATGCCTTGAAGCATGGACAGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS TCA 90 bp | CATTCTTTCAAGGAACGAGTTGAAGGTGTAGGAATGGCTGGATCTTaGAAACTAGGGGTACCAAGTACTGCATTGTCCCGAAACCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSFKERVEGVGMAGS*KLGVPSTALSRNHF Trigger: GAAATGGTTTCGGGACAATGCAGTACTTGGTACCCCTAGTTTTCAAGATCCAGCCATTCCTACACCTTCAACTCGTTCCTTGAAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CAA 90 bp | GGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTAATTCCCAGTTGTGTCACCAAACCATaGAATGATCTCCGGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLALYFQMTNQLLPVIPSCVTKP*NDLRAR Trigger: CCTCGCCCGGAGATCATTCAATGGTTTGGTGACACA...ACTGGGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CAA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCACCTGCTGCAGAGCTGTaGAGACTGCTGGCATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSNLGLALYFQMTNQLLPPAAEL*RLLASL Trigger: TAAAGATGCCAGCAGTCTCAACAGCTCTGCAGCAGG...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCAGGTAGAGGTGGTGTCTaGGCCCATTCTTTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSQMFQIFPKFLRYFTSSGRGGV*AHSFKE Trigger: TTCCTTGAAAGAATGGGCCAAGACACCACCTCTACC...TGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR CAA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGGTAGAGGTGGTGTCTaGGCCCATTCTTTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSNLGLALYFQMTNQLLPGRGGV*AHSFKE Trigger: TTCCTTGAAAGAATGGGCCAAGACACCACCTCTACC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CAA 90 bp | AGTCAGATGTTCCAAATCTTCCCAAAGTTCCTCAGATATTTTACATCATCATCAAGTCTTTCGCTGGTGTaGCATATCTGGGGAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQMFQIFPKFLRYFTSSSSLSLV*HIWGKV Trigger: TACCTTTCCCCAGATATGCAACACCAGCGAAAGACT...TGATGATGATGTAAAATATCTGAGGAACTTTGGGAAGATTTGGAACATCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081162.6 |
||
| CDS-3UTR CAA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCAGTACCAAGTACTGCATaGTCCCGAAACCATTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSNLGLALYFQMTNQLLPVPSTA*SRNHFS Trigger: GCTGAAATGGTTTCGGGACAATGCAGTACTTGGTAC...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS-3UTR CAA 90 bp | TTAAGCAATTTGGGTCTTGCACTCTATTTTCAGATGACTAACCAATTGTTACCATGGGGCCAGCTGAATTaGGTTCTGAGTTATTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LSNLGLALYFQMTNQLLPWGQLN*VLSYSI Trigger: TATGGAATAACTCAGAACCAAATTCAGCTGGCCCCA...TGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACCCAAATTGCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS GCA 72 bp | TCACTAGGCGCCAGAGGACTCAGTCCAAGAGCAACCTaGTCCGGACGGAGCACTGGAGGCCTCTCCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGARGLSPRAT*SGRSTGGLSCG Trigger: CCCACAGGAGAGGCCTCCAGTGCTCCGTCCGGAGCAGGTTGCTCTTGGACTGAGTCCTCTGGCGCCTAGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS GCA 72 bp | CTGCAGCCCATGCCGCAGGCAGAGGAGAGCGATATCTaGCAGGCTTGGATAGGGGAAGTAGCTGAAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LQPMPQAEESDI*QAWIGEVAEGL Trigger: CAAGCCTTCAGCTACTTCCCCTATCCAAGCCTGGCAGATATCGCTCTCCTCTGCCTGCGGCATGGGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS TCA 72 bp | CACCACTCTGGCACGAGTCTCCTCTATCTCTTCAGATaGCCAGCTAATGCCGCAGCGGAGACGTTGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HHSGTSLLYLFR*PANAAAETLGH Trigger: ATGGCCCAACGTCTCCGCTGCGGCATTAGCTGGTCATCTGAAGAGATAGAGGAGACTCGTGCCAGAGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS GCA 72 bp | CGTTGGGCCATGAACCAGGTCTTTACCTTCTCCATCTaGAGCCCATGCCGCAGGCAGAGGAGAGCGATATCT | + |
|
Preference number: 6 (lower is better) Translates to: RWAMNQVFTFSI*SPCRRQRRAIS Trigger: AGATATCGCTCTCCTCTGCCTGCGGCATGGGCTGCAGATGGAGAAGGTAAAGACCTGGTTCATGGCCCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS TCA 72 bp | GAGGGCTCCTCAGGCTCAACCTTCAATCCTTTCATATaGGTGGGCTGCTCACTAGGCGCCAGAGGACTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: EGSSGSTFNPFI*VGCSLGARGLS Trigger: ACTGAGTCCTCTGGCGCCTAGTGAGCAGCCCACTCATATGAAAGGATTGAAGGTTGAGCCTGAGGAGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS GCA 72 bp | ATGAACCAGGTCTTTACCTTCTCCATCTGCAGCCCATaGCGCAGGCAGAGGAGAGCGATATCTGCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: MNQVFTFSICSP*RRQRRAISARL Trigger: AAGCCTGGCAGATATCGCTCTCCTCTGCCTGCGGCATGGGCTGCAGATGGAGAAGGTAAAGACCTGGTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS TCA 72 bp | TGCTCATTTCCATCCAGCTCACTGGTTTGGATGGCTTaGGTCCACACAAGCTGTAGCTCCTCTGAGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CSFPSSSLVWMA*VHTSCSSSETG Trigger: GCCAGTCTCAGAGGAGCTACAGCTTGTGTGGACTCAAGCCATCCAAACCAGTGAGCTGGATGGAAATGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS TCA 72 bp | AGCTGTGAAGTGATTCCAGGAAGCAGTCTTTCCACATaGCTGGTCAGGACCTCTGCCTGCCTGCTCCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCEVIPGSSLST*LVRTSACLLLR Trigger: TCTAAGGAGCAGGCAGGCAGAGGTCCTGACCAGTCATGTGGAAAGACTGCTTCCTGGAATCACTTCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS GCA 72 bp | TTTAAGGATATCAGCTTCCTGCAGCTGCTGGTGGGCTaGCCAGTACTTCTCCAAAGGTCGTATATCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FKDISFLQLLVG*PVLLQRSYIWW Trigger: CCACCAGATATACGACCTTTGGAGAAGTACTGGGCAGCCCACCAGCAGCTGCAGGAAGCTGATATCCTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS CCA 72 bp | AGGCTTGTAGCAGGTGCTCATTTCCATCCAGCTCACTaGTTTGGATGGCTTGAGTCCACACAAGCTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLVAGAHFHPAH*FGWLESTQAVA Trigger: AGCTACAGCTTGTGTGGACTCAAGCCATCCAAACCAGTGAGCTGGATGGAAATGAGCACCTGCTACAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000146642.2 |
||
| CDS TCA 72 bp | CTTAGAGAGGCCACTGATCTGAAGATCCTGACAGTCTaGTTGGTGGGAGAATGTTCTGCTGCCCATCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LREATDLKILTV*LVGECSAAHHQ Trigger: CTGATGATGGGCAGCAGAACATTCTCCCACCAATCAGACTGTCAGGATCTTCAGATCAGTGGCCTCTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS CCA 72 bp | CCAGCTGAATTTGGTTCTGAGTTATTCCATAGCCTTTaGGGCCAGAGTGGTTCTACTTGTGGAGACAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAEFGSELFHSL*GQSGSTCGDSA Trigger: GGCACTGTCTCCACAAGTAGAACCACTCTGGCCCCAAAGGCTATGGAATAACTCAGAACCAAATTCAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 72 bp | CCATGCTTCAAGGCATATCGTGTGTCACCAAACCATTaGATGATCTCCGGGCGAGGTAAACCAGTGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PCFKAYRVSPNH*MISGRGKPVIC Trigger: ACAGATCACTGGTTTACCTCGCCCGGAGATCATTCAATGGTTTGGTGACACACGATATGCCTTGAAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS CCA 72 bp | GCCAACTGTTCTTTGGTTTTCCGCTTAGTCTTTCGCTaGTGTTGCATATCTGGGGAAAGGTATTCTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ANCSLVFRLVFR*CCISGERYSVG Trigger: CCCCACAGAATACCTTTCCCCAGATATGCAACACCAGCGAAAGACTAAGCGGAAAACCAAAGAACAGTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||
| CDS TCA 72 bp | AAGGAACGAGTTGAAGGTGTAGGAATGGCTGGATCTTaGAAACTAGGGGTACCAAGTACTGCATTGTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: KERVEGVGMAGS*KLGVPSTALSR Trigger: TCGGGACAATGCAGTACTTGGTACCCCTAGTTTTCAAGATCCAGCCATTCCTACACCTTCAACTCGTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS TCA 72 bp | AGGTGGTGTCTTGGCCCATTCTTTCAAGGAACGAGTTaGAGGTGTAGGAATGGCTGGATCTTGAAAACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RWCLGPFFQGTS*RCRNGWILKTR Trigger: CCTAGTTTTCAAGATCCAGCCATTCCTACACCTTCAACTCGTTCCTTGAAAGAATGGGCCAAGACACCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 ENSMUST00000176259.3 |
||
| CDS CAA 72 bp | TGTAGGAAAAAGGATTTGAGGATGGCCAACTGTTCTTaGGTTTTCCGCTTAGTCTTTCGCTGGTGTTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: CRKKDLRMANCS*VFRLVFRWCCI Trigger: TATGCAACACCAGCGAAAGACTAAGCGGAAAACCAAAGAACAGTTGGCCATCCTCAAATCCTTTTTCCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081162.6 ENSMUST00000142283.4 |
||