Pregenerated sensors for HOMER3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003573Ensembl transcript IDs: ENSMUST00000003669.8, ENSMUST00000087467.12, ENSMUST00000110124.9, ENSMUST00000135368.2, ENSMUST00000140212.8
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGGACAGGCATAAGAGTGTGGCCAGTAAGGGTGGGTGGGACCTaGGGTCGGGTAGGGGTGGGGGAGCCAGTCCCTGGGAAGCTGCCC | + |
|
Preference number: 1 (lower is better) Translates to: AGTGIRVWPVRVGGT*GRVGVGEPVPGKLP Trigger: GGGCAGCTTCCCAGGGACTGGCTCCCCCACCCCTACCCGACCCCAGGTCCCACCCACCCTTACTGGCCACACTCTTATGCCTGTCCCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | GGTAGTATAGGGAGGCATGGGTATGCAGGGACAGGCATAAGAGTGTaGCCAGTAAGGGTGGGTGGGACCTGGGGTCGGGTAGGGGTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: GSIGRHGYAGTGIRV*PVRVGGTWGRVGVG Trigger: CCCCACCCCTACCCGACCCCAGGTCCCACCCACCCTTACTGGCCACACTCTTATGCCTGTCCCTGCATACCCATGCCTCCCTATACTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR TCA 90 bp | CCCAGATCTCGGCCCCAAGAGCCAGCCCAGGCTGAGGCTCAGGACTaGGCTGTAAACCTGGTGCTGGTGGCCCCTGACTTCAGTAAACAC | + |
|
Preference number: 1 (lower is better) Translates to: PRSRPQEPAQAEAQD*AVNLVLVAPDFSKH Trigger: GTGTTTACTGAAGTCAGGGGCCACCAGCACCAGGTTTACAGCTCAGTCCTGAGCCTCAGCCTGGGCTGGCTCTTGGGGCCGAGATCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | ACTCCCAGCCCAACTCAGTGTTTCCTGTCCCTGCAGAGCAGCAGCTaGCAGAGCTGGTGGTGGAGGAGGCTGAGGTTCTACAAATCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: TPSPTQCFLSLQSSS*QSWWWRRLRFYKSS Trigger: TGAGGATTTGTAGAACCTCAGCCTCCTCCACCACCAGCTCTGCCAGCTGCTGCTCTGCAGGGACAGGAAACACTGAGTTGGGCTGGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR TCA 90 bp | CAGCTCCCTTCCGCAGGACCCAGACCTGGAGGCCAAACGCAAAGCTaGGCTGGCCAAGATCAAGCAACAAAACCGACGCTTCAAGGAGAA | + |
|
Preference number: 1 (lower is better) Translates to: QLPSAGPRPGGQTQS*AGQDQATKPTLQGE Trigger: TTCTCCTTGAAGCGTCGGTTTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGTCCTGCGGAAGGGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR GCA 90 bp | GGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGTaGTGTGATGACAAGCATGTGCTGCCAAGCTTGGCAGCATTTTGC | + |
|
Preference number: 1 (lower is better) Translates to: GTQLERVIPLPPTSQ*CDDKHVLPSLAAFC Trigger: GCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | AGCTGGCCAAGATCAAGCAACAAAACCGACGCTTCAAGGAGAAAGTaGGGCAGACACTTCGGCGGCAGAAAGCAGGGAGCACTGTCCGAC | + |
|
Preference number: 1 (lower is better) Translates to: SWPRSSNKTDASRRK*GRHFGGRKQGALSD Trigger: GTCGGACAGTGCTCCCTGCTTTCTGCCGCCGAAGTGTCTGCCCCACTTTCTCCTTGAAGCGTCGGTTTTGTTGCTTGATCTTGGCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | CCCTTCCGCAGGACCCAGACCTGGAGGCCAAACGCAAAGCTGAGCTaGCCAAGATCAAGCAACAAAACCGACGCTTCAAGGAGAAAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: PFRRTQTWRPNAKLS*PRSSNKTDASRRKW Trigger: CCACTTTCTCCTTGAAGCGTCGGTTTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGTCCTGCGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR TCA 90 bp | AGATTCTTGCTCTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTaGTCCCCCTGCCTCCAACCTCCCAGTGCTGTGATGACAAGCATG | + |
|
Preference number: 1 (lower is better) Translates to: RFLLYRAGLELSWNE*SPCLQPPSAVMTSM Trigger: CATGCTTGTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAGAGCAAGAATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | AGCTGCCCAGTTACATTCTCAGCTCCCTTCCGCAGGACCCAGACCTaGAGGCCAAACGCAAAGCTGAGCTGGCCAAGATCAAGCAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: SCPVTFSAPFRRTQT*RPNAKLSWPRSSNK Trigger: TTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGTCCTGCGGAAGGGAGCTGAGAATGTAACTGGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | GCAGCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTaGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTG | + |
|
Preference number: 1 (lower is better) Translates to: AAAARDSNATRRNVT*VEALPKDSRKLYTV Trigger: CACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | GTTTATTCAGTCATTAATTTGAGACAGATTCTTGCTCTACAGAGCTaGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACC | + |
|
Preference number: 1 (lower is better) Translates to: VYSVINLRQILALQS*PGTQLERVIPLPPT Trigger: GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAGAGCAAGAATCTGTCTCAAATTAATGACTGAATAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 90 bp | CTCCAACCTCCCAGTGCTGTGATGACAAGCATGTGCTGCCAAGCTTaGCAGCATTTTGCTTTTTCTAAATATCATCAGTCCACATTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: LQPPSAVMTSMCCQA*QHFAFSKYHQSTFG Trigger: ACCAAATGTGGACTGATGATATTTAGAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTGGGAGGTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGTGCTGTGATGACCCCTCGCAGTGTCCCTaGGGCGCAGGGCAGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TQLERVIPLPPTSQCCDDPSQCP*GAGQQQ Trigger: CTGCTGCTGCCCTGCGCCCCAGGGACACTGCGAGGG...GTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCAAGCTCAGAGACAGCTaGGGTCCCCTGGCCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PHLVGSRHPELGVQRAGCKLRDS*GPLAPA Trigger: GGCAGGGGCCAGGGGACCCCAGCTGTCTCTGAGCTT...GCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCAAGCTCAGAGACAGCTaGGGTCCCCTGGCCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: QVSGSQSLCCPMGMTSAAKLRDS*GPLAPA Trigger: GGCAGGGGCCAGGGGACCCCAGCTGTCTCTGAGCTT...GGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGAAGCTCAGAGACAGCTaGGGTCCCCTGGCCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: WGGMSTGPSGLRIPKPLLKLRDS*GPLAPA Trigger: GGCAGGGGCCAGGGGACCCCAGCTGTCTCTGAGCTT...CAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCTTCAAGCTCAGAGACAGCTaGGGTCCCCTGGCCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: VSGSQSLCCPMGMTSAAFKLRDS*GPLAPA Trigger: GGCAGGGGCCAGGGGACCCCAGCTGTCTCTGAGCTT...GAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCAGCTGGCAGAGCTGGTaGTGGAGGAGGCTGAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PHLVGSRHPELGVQRAGCSWQSW*WRRLRF Trigger: GAACCTCAGCCTCCTCCACCACCAGCTCTGCCAGCT...GCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CAA 90 bp | TTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTaGCACTCCCAGCCCAACTCAGTGTTTCCTGTCCCTGCAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FGWIQTSRAGGAEGW*HSQPNSVFPVPAEQ Trigger: CTGCTCTGCAGGGACAGGAAACACTGAGTTGGGCTGGGAGTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTGCGAAATAGTAAGTGTGGCCAGCCTGTCAGGGTAGGGTGGAGTGGGGTGGCTTCAAGGAGAAAGTaGGGCAGACACTTCGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: GVRNSKCGQPVRVGWSGVASRRK*GRHFGG Trigger: GCCGCCGAAGTGTCTGCCCCACTTTCTCCTTGAAGC...CACCCCACTCCACCCTACCCTGACAGGCTGGCCACACTTACTATTTCGCACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGGCATGGGTATGCAGGGACAGGCATAAGAGTGTGGCCAGTAAGGGTGGGGCTTCAAGGAGAAAGTaGGGCAGACACTTCGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: REAWVCRDRHKSVASKGGASRRK*GRHFGG Trigger: GCCGCCGAAGTGTCTGCCCCACTTTCTCCTTGAAGC...CCCACCCTTACTGGCCACACTCTTATGCCTGTCCCTGCATACCCATGCCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCACAGCTGGCAGAGCTGGTaGTGGAGGAGGCTGAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TFGWIQTSRAGGAEGWLHSWQSW*WRRLRF Trigger: GAACCTCAGCCTCCTCCACCACCAGCTCTGCCAGCT...GTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCACGCTGAGGCTCAGGACTaGGCTGTAAACCTGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TFGWIQTSRAGGAEGWLHAEAQD*AVNLVL Trigger: CAGCACCAGGTTTACAGCTCAGTCCTGAGCCTCAGC...GTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGGCATGGGTATGCAGGGACAGGCATAAGAGTGTGGCCAGTAAGGGTGGGGGCCAAACGCAAAGCTaGGCTGGCCAAGATCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: REAWVCRDRHKSVASKGGGQTQS*AGQDQA Trigger: TGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCC...CCCACCCTTACTGGCCACACTCTTATGCCTGTCCCTGCATACCCATGCCTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACGTGAGTTCAGCTCCCAGCACCTATGTCAGGAGCCTTAACCATGGCCCGCTGCTCCAGGAGATCTaGTGTCCCCCTCTGACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KDVSSAPSTYVRSLNHGPLLQEI*CPPLTS Trigger: AGAGGTCAGAGGGGGACATCAGATCTCCTGGAGCAG...CGGGCCATGGTTAAGGCTCCTGACATAGGTGCTGGGAGCTGAACTCACGTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| 3UTR-3UTR GCA 90 bp | CCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCAGGGAGGCATGGGTATaGAGGGACAGGCATAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: PHLVGSRHPELGVQRAGCREAWV*RDRHKS Trigger: ACTCTTATGCCTGTCCCTGCATACCCATGCCTCCCT...GCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCCCCACCCCTAGAAACTaGAGGCTTCGCATTTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: LQSWPGTQLERVIPLPPTPTPRN*RLRILM Trigger: CATCAAAATGCGAAGCCTCCAGTTTCTAGGGGTGGG...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGATCAACAAGCGGAAACAGATGATCCTGGAGGGGAAGGTAGTATAGGGAGGAGAGCCAGCCCAGGCTaGGGCTCAGGACTGAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RDQQAETDDPGGEGSIGRRASPG*GSGLSC Trigger: ACAGCTCAGTCCTGAGCCTCAGCCTGGGCTGGCTCT...CCTCCCTATACTACCTTCCCCTCCAGGATCATCTGTTTCCGCTTGTTGATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGTGCTGTGATGACGTAGTGCGAAGGGAGTaGGAAATAGTAAGTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: TQLERVIPLPPTSQCCDDVVRRE*EIVSVA Trigger: GGCCACACTTACTATTTCGCACTCCCTTCGCACTAC...GTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR GCA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCGAAAACTCTACACAGTaGAAAGCTCAGAGACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LQSWPGTQLERVIPLPPTENSTQ*KAQRQL Trigger: CAGCTGTCTCTGAGCTTTGCACTGTGTAGAGTTTTC...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGCTGTGATGACAAGCATGTGCTGCCAAGCTTGGCAGCATTTTGCTTTTTCCGCAGGACCCAGACCTaGAGGCCAAACGCAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QCCDDKHVLPSLAAFCFFRRTQT*RPNAKL Trigger: CAGCTTTGCGTTTGGCCTCCAGGTCTGGGTCCTGCG...GAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGATCAACAAGCGGAAACAGATGATCCTGGAGGGGAAGGTAGTATAGGGAGGGGCCAAACGCAAAGCTaGGCTGGCCAAGATCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RDQQAETDDPGGEGSIGRGQTQS*AGQDQA Trigger: TGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCC...CCTCCCTATACTACCTTCCCCTCCAGGATCATCTGTTTCCGCTTGTTGATCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCTTCGAAAACTCTACACAGTaGAAAGCTCAGAGACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSGSQSLCCPMGMTSAAFENSTQ*KAQRQL Trigger: CAGCTGTCTCTGAGCTTTGCACTGTGTAGAGTTTTC...GAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGCTGTGATGACAAGCATGTGCTGCCAAGCTTGGCAGCATTTTGCTTTTTCGCTTCAAGGAGAAAGTaGGGCAGACACTTCGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: QCCDDKHVLPSLAAFCFFASRRK*GRHFGG Trigger: GCCGCCGAAGTGTCTGCCCCACTTTCTCCTTGAAGC...GAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGATCAACAAGCGGAAACAGATGATCCTGGAGGGGAAGGTAGTATAGGGAGGGAAAACTCTACACAGTaGAAAGCTCAGAGACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RDQQAETDDPGGEGSIGRENSTQ*KAQRQL Trigger: CAGCTGTCTCTGAGCTTTGCACTGTGTAGAGTTTTC...CCTCCCTATACTACCTTCCCCTCCAGGATCATCTGTTTCCGCTTGTTGATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTAAATATCATCAGTCCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTAGTGCGAAGGGAGTaGGAAATAGTAAGTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: FLNIISPHLVGSRHPELGVVRRE*EIVSVA Trigger: GGCCACACTTACTATTTCGCACTCCCTTCGCACTAC...CCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGGACTGATGATATTTAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGCTGTGATGACAAGCATGTGCTGCCAAGCTTGGCAGCATTTTGCTTTTTCAACGCAAAGCTGAGCTaGCCAAGATCAAGCAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: QCCDDKHVLPSLAAFCFFNAKLS*PRSSNK Trigger: TTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTT...GAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTAAATATCATCAGTCCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGAAAACTCTACACAGTaGAAAGCTCAGAGACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLNIISPHLVGSRHPELGENSTQ*KAQRQL Trigger: CAGCTGTCTCTGAGCTTTGCACTGTGTAGAGTTTTC...CCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGGACTGATGATATTTAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 72 bp | GGCATAAGAGTGTGGCCAGTAAGGGTGGGTGGGACCTaGGGTCGGGTAGGGGTGGGGGAGCCAGTCCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GIRVWPVRVGGT*GRVGVGEPVPG Trigger: CCCAGGGACTGGCTCCCCCACCCCTACCCGACCCCAGGTCCCACCCACCCTTACTGGCCACACTCTTATGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR TCA 72 bp | TCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATaGCTAGTGCAGCCTTCCCTCGCAGTGTCCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQDPKASVAPWG*LVQPSLAVSLG Trigger: CCCCAGGGACACTGCGAGGGAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| 3UTR GCA 72 bp | CAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTaGCCCATGGGGATGACTAGTGCAGCCTTCCCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: QGLQVSGSQSLC*PMGMTSAAFPR Trigger: GCGAGGGAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| 3UTR CCA 72 bp | TGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTaGTTGCACTCCCAGCCCAACTCAGTGTTTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WIQTSRAGGAEG*LHSQPNSVFPV Trigger: GACAGGAAACACTGAGTTGGGCTGGGAGTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR GCA 72 bp | CACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTaGAGAGGGCTGGTTGCACTCCCAGCCCAACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HIWLDPDIQSWG*RGLVALPAQLS Trigger: ACTGAGTTGGGCTGGGAGTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR GCA 72 bp | CTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGTaGTGTGATGACAAGCATGTGCTGCCAAGCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LERVIPLPPTSQ*CDDKHVLPSLA Trigger: TGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCAGTTGTCAGTCTGACTaGAGAATGGGGTGGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: LQSWPGTQLERVIPLPPTSCQSD*RMGWDE Trigger: CTCATCCCACCCCATTCTCAAGTCAGACTGACAACT...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR TCA 72 bp | AGAGCAGCAGCTGGCAGAGCTGGTGGTGGAGGAGGCTaGGGTTCTACAAATCCTCACGCAGGTCAACGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RAAAGRAGGGGG*GSTNPHAGQRS Trigger: ACTACGTTGACCTGCGTGAGGATTTGTAGAACCTCAGCCTCCTCCACCACCAGCTCTGCCAGCTGCTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 72 bp | GTTACATTCTCAGCTCCCTTCCGCAGGACCCAGACCTaGAGGCCAAACGCAAAGCTGAGCTGGCCAAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: VTFSAPFRRTQT*RPNAKLSWPRS Trigger: TGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGTCCTGCGGAAGGGAGCTGAGAATGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 72 bp | AGGACCCAGACCTGGAGGCCAAACGCAAAGCTGAGCTaGCCAAGATCAAGCAACAAAACCGACGCTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTQTWRPNAKLS*PRSSNKTDASR Trigger: CCTTGAAGCGTCGGTTTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGCTGTGATGACAAGCATGTGCTGCCAAGCTTGGCAGCATTTTGCTTTTTCGGTGCAGAGGGCTGGTaGCACTCCCAGCCCAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: QCCDDKHVLPSLAAFCFFGAEGW*HSQPNS Trigger: TGAGTTGGGCTGGGAGTGCAACCAGCCCTCTGCACC...GAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CCA 72 bp | AGATCAAGCAACAAAACCGACGCTTCAAGGAGAAAGTaGGGCAGACACTTCGGCGGCAGAAAGCAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSSNKTDASRRK*GRHFGGRKQGA Trigger: TGCTCCCTGCTTTCTGCCGCCGAAGTGTCTGCCCCACTTTCTCCTTGAAGCGTCGGTTTTGTTGCTTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR GCA 72 bp | TGCCTCCAACCTCCCAGTGCTGTGATGACAAGCATGTaGTGCCAAGCTTGGCAGCATTTTGCTTTTTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLQPPSAVMTSM*CQAWQHFAFSK Trigger: TTTAGAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTGGGAGGTTGGAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CCCATGGGGATGACTAGTGCAGCCTTCCCTCGCAGTGTCCCTGGGGCGCAGGGCGCGCCTCCTCCAGGTTaGACTCCATCGACCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PMGMTSAAFPRSVPGAQGAPPPG*TPSTAA Trigger: AGCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGC...GCCCTGCGCCCCAGGGACACTGCGAGGGAAGGCTGCACTAGTCATCCCCATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CCCATGGGGATGACTAGTGCAGCCTTCCCTCGCAGTGTCCCTGGGGCGCAGGGCATCGACCGCAGCTGCTaGTCCAGCTCTGCATTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PMGMTSAAFPRSVPGAQGIDRSC*SSSAFR Trigger: CCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTCGAT...GCCCTGCGCCCCAGGGACACTGCGAGGGAAGGCTGCACTAGTCATCCCCATGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | CCCATGGGGATGACTAGTGCAGCCTTCCCTCGCAGTGTCCCTGGGGCGCAGGGCGCTGACCAAGGGGCTTaGAGGAACCTGATGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PMGMTSAAFPRSVPGAQGADQGA*RNLMGG Trigger: GCCTCCCATCAGGTTCCTCCAAGCCCCTTGGTCAGC...GCCCTGCGCCCCAGGGACACTGCGAGGGAAGGCTGCACTAGTCATCCCCATGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCCGAACATCCAGCAGCTaGGCAGCCCGGCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSWPGTQLERVIPLPPTRTSSS*AARPTS Trigger: GGAGGTGGGCCGGGCTGCGCAGCTGCTGGATGTTCG...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGACGAACATCCAGCAGCTaGGCAGCCCGGCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EYRAFRSQDPKASVAPWGRTSSS*AARPTS Trigger: GGAGGTGGGCCGGGCTGCGCAGCTGCTGGATGTTCG...TCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR TCA 90 bp | CCCATGGGGATGACTAGTGCAGCCTTCCCTCGCAGTGTCCCTGGGGCGCAGGGCCGGGTGCCAGTGCTCTaGTTCTTCAAAGTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PMGMTSAAFPRSVPGAQGRVPVL*FFKVWI Trigger: GATCCAGACTTTGAAGAATCAGAGCACTGGCACCCG...GCCCTGCGCCCCAGGGACACTGCGAGGGAAGGCTGCACTAGTCATCCCCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCACCCGAGCCTCCAGCTaGTCCACCGACTGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSWPGTQLERVIPLPPTTRASS*STDWLV Trigger: AACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGT...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCTGGTGGTGGAGGAGGCTGAGGTTCTACAAATCCTCACGCAGGTCAACCGAACATCCAGCAGCTaGGCAGCCCGGCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AELVVEEAEVLQILTQVNRTSSS*AARPTS Trigger: GGAGGTGGGCCGGGCTGCGCAGCTGCTGGATGTTCG...GTTGACCTGCGTGAGGATTTGTAGAACCTCAGCCTCCTCCACCACCAGCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAAAGTGGGGCAGACACTTCGGCGGCAGAAAGCAGGGAGCACTGTCCGATGCCTCTGCCAGGCGTaGCAGGCCTTCACGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEKVGQTLRRQKAGSTVRCLCQA*QAFTQL Trigger: GAGCTGCGTGAAGGCCTGGCACGCCTGGCAGAGGCA...TCGGACAGTGCTCCCTGCTTTCTGCCGCCGAAGTGTCTGCCCCACTTTCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCCTCTCCTGCCCGGACTaGCTCTACAGCCACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVSGSQSLCCPMGMTSAALSCPD*LYSHLG Trigger: GCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAG...GGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGTGCTGTGATGACACCCGAGCCTCCAGCTaGTCCACCGACTGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQLERVIPLPPTSQCCDDTRASS*STDWLV Trigger: AACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGT...GTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAAAGTGGGGCAGACACTTCGGCGGCAGAAAGCAGGGAGCACTGTCCGATCCTGGTCCTTGGTCTaGACCCGAGCCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEKVGQTLRRQKAGSTVRSWSLV*TRASSC Trigger: GCAGCTGGAGGCTCGGGTGCAGACCAAGGACCAGGA...TCGGACAGTGCTCCCTGCTTTCTGCCGCCGAAGTGTCTGCCCCACTTTCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGTGCCTCTGCCAGGCGTaGCAGGCCTTCACGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WGGMSTGPSGLRIPKPLLCLCQA*QAFTQL Trigger: GAGCTGCGTGAAGGCCTGGCACGCCTGGCAGAGGCA...CAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCTTCCTAGGGTGCTGCCTCTaGCAGGCGTGCCAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSGSQSLCCPMGMTSAAFLGCCL*QACQAF Trigger: GAAGGCCTGGCACGCCTGGCAGAGGCAGCACCCTAG...GAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCTAGGGTGCTGCCTCTaGCAGGCGTGCCAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGGMSTGPSGLRIPKPLLLGCCL*QACQAF Trigger: GAAGGCCTGGCACGCCTGGCAGAGGCAGCACCCTAG...CAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGCTAGGGTGCTGCCTCTaGCAGGCGTGCCAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSTGPSGLRIPKPLLPHGLGCCL*QACQAF Trigger: GAAGGCCTGGCACGCCTGGCAGAGGCAGCACCCTAG...CCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACGTCTGGTCCTTGGTCTaGACCCGAGCCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGPSGLRIPKPLLPHGDDVWSLV*TRASSC Trigger: GCAGCTGGAGGCTCGGGTGCAGACCAAGGACCAGAC...GTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | CCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCGGCTCTACAGCCACCTaGGCCTCCAGCTCTGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PHLVGSRHPELGVQRAGCGSTAT*ASSSAT Trigger: GGTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGAGCC...GCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAAAGTGGGGCAGACACTTCGGCGGCAGAAAGCAGGGAGCACTGTCCGAGGCTCTACAGCCACCTaGGCCTCCAGCTCTGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: KEKVGQTLRRQKAGSTVRGSTAT*ASSSAT Trigger: GGTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGAGCC...TCGGACAGTGCTCCCTGCTTTCTGCCGCCGAAGTGTCTGCCCCACTTTCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGTGCTGTGATGACGGCTCTACAGCCACCTaGGCCTCCAGCTCTGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TQLERVIPLPPTSQCCDDGSTAT*ASSSAT Trigger: GGTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGAGCC...GTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCGAAATAGTAAGTGTGGCCAGCCTGTCAGGGTAGGGTGGAGTGGGGTGAAGCGCGAAGAACTCTaGCTCCCACTGGACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVRNSKCGQPVRVGWSGVKREEL*LPLDLP Trigger: GGGGAGGTCCAGTGGGAGGCAGAGTTCTTCGCGCTT...CACCCCACTCCACCCTACCCTGACAGGCTGGCCACACTTACTATTTCGCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACAAGCGCGAAGAACTCTaGCTCCCACTGGACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGPSGLRIPKPLLPHGDDKREEL*LPLDLP Trigger: GGGGAGGTCCAGTGGGAGGCAGAGTTCTTCGCGCTT...GTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCCACCGACTGGCTGGTTaGTTCTTTCTCTCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQSWPGTQLERVIPLPPTHRLAG*FFLSCP Trigger: CGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTG...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGACCCGAGCCTCCAGCTaGTCCACCGACTGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSTGPSGLRIPKPLLPHGTRASS*STDWLV Trigger: AACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGT...CCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGTCCTGGTCCTTGGTCTaGACCCGAGCCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WGGMSTGPSGLRIPKPLLSWSLV*TRASSC Trigger: GCAGCTGGAGGCTCGGGTGCAGACCAAGGACCAGGA...CAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCCTGCTGCTCCAGCTCTaGATTCCGGGTCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVSGSQSLCCPMGMTSAALLLQL*IPGLQV Trigger: GACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAG...GGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCATCGACCGCAGCTGCTaGTCCAGCTCTGCATTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGMSTGPSGLRIPKPLLPIDRSC*SSSAFR Trigger: CCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTCGAT...GGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTTGCCTCTGCCAGGCGTaGCAGGCCTTCACGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGWDEYRAFRSQDPKASVCLCQA*QAFTQL Trigger: GAGCTGCGTGAAGGCCTGGCACGCCTGGCAGAGGCA...AACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTGGGTAGAAGCACTCTCCTGCCCGGACTaGCTCTACAGCCACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAARDSNATRRNVTWVEALSCPD*LYSHLG Trigger: GCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAG...TGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGGCTCCACCGACTGGCTaGTTGCTTCTTTCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWPGTQLERVIPLPPTSQAPPTG*LLLSLL Trigger: CAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGC...CTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| 3UTR CAA 72 bp | ATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTaGCACTCCCAGCCCAACTCAGTGTTTCCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQTSRAGGAEGW*HSQPNSVFPVP Trigger: AGGGACAGGAAACACTGAGTTGGGCTGGGAGTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACCGGGTCTCCAGGTCCTaGACTTGCTGCTGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGPSGLRIPKPLLPHGDDRVSRS*TCCCVS Trigger: AGAGACACAGCAGCAAGTTCAGGACCTGGAGACCCG...GTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCGGGTCTCCAGGTCCTaGACTTGCTGCTGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGMSTGPSGLRIPKPLLPRVSRS*TCCCVS Trigger: AGAGACACAGCAGCAAGTTCAGGACCTGGAGACCCG...GGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTCACCGACTGGCTGGTTaGTTCTTTCTCTCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGLQVSGSQSLCCPMGMTHRLAG*FFLSCP Trigger: CGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTG...AGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCTTCATCGACCGCAGCTGCTaGTCCAGCTCTGCATTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGSQSLCCPMGMTSAAFIDRSC*SSSAFR Trigger: CCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTCGAT...GAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCGCCTCCTCCAGGTTaGACTCCATCGACCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGWDEYRAFRSQDPKASVAPPPG*TPSTAA Trigger: AGCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGC...AACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGCTGACCAAGGGGCTTaGAGGAACCTGATGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSTGPSGLRIPKPLLPHGADQGA*RNLMGG Trigger: GCCTCCCATCAGGTTCCTCCAAGCCCCTTGGTCAGC...CCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCTTCCGGGTCTCCAGGTCCTaGACTTGCTGCTGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGSQSLCCPMGMTSAAFRVSRS*TCCCVS Trigger: AGAGACACAGCAGCAAGTTCAGGACCTGGAGACCCG...GAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCAGCACCTATGTCAGGAGCCTTAACCATGGCCCGTTCCTCCTGCTCCAGTCGATCTGGAATACGTaGGCCCGGGTGCTGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: APSTYVRSLNHGPFLLLQSIWNT*ARVLKI Trigger: AATCTTCAGCACCCGGGCGCACGTATTCCAGATCGA...CTGGAGCAGGAGGAACGGGCCATGGTTAAGGCTCCTGACATAGGTGCTGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR GCA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCGATCTGGAATACGTaGGCCCGGGTGCTGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LQSWPGTQLERVIPLPPTSIWNT*ARVLKI Trigger: AATCTTCAGCACCCGGGCGCACGTATTCCAGATCGA...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTCCCAGCACCTATGTCAGGAGCCTTAACCATGGCCCGTTCCTCCTGCTCGTTGGCTCGACTGTCTaGCCATTGCCCGAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAPSTYVRSLNHGPFLLLVGSTV*PLPELL Trigger: CAGAAGTTCGGGCAATGGGCAGACAGTCGAGCCAAC...GAGCAGGAGGAACGGGCCATGGTTAAGGCTCCTGACATAGGTGCTGGGAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTGTTGGCTCGACTGTCTaGCCATTGCCCGAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLQVSGSQSLCCPMGMTVGSTV*PLPELL Trigger: CAGAAGTTCGGGCAATGGGCAGACAGTCGAGCCAAC...AGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACGTTGGCTCGACTGTCTaGCCATTGCCCGAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGPSGLRIPKPLLPHGDDVGSTV*PLPELL Trigger: CAGAAGTTCGGGCAATGGGCAGACAGTCGAGCCAAC...GTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCGCAAACTGGGTCAGCTaGTGTTCAGAGGCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTELAWNSAGTSDPPASANWVS*CSEAKP Trigger: AGGCTTTGCCTCTGAACAGCAGCTGACCCAGTTTGC...GGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCTTCCACCGACTGGCTGGTTaGTTCTTTCTCTCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSGSQSLCCPMGMTSAAFHRLAG*FFLSCP Trigger: CGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTG...GAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTCTGCTGCTCCAGCTCTaGATTCCGGGTCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MGWDEYRAFRSQDPKASVLLLQL*IPGLQV Trigger: GACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAG...AACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CACGCAGGTCAACGTAGTGCGAAGGGAGTGCGAAATAGTAAGTGTGGCCAGCCTCTGCTGCTCCAGCTCTaGATTCCGGGTCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HAGQRSAKGVRNSKCGQPLLLQL*IPGLQV Trigger: GACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAG...AGGCTGGCCACACTTACTATTTCGCACTCCCTTCGCACTACGTTGACCTGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTGGGTAGAAGCACTGCTGCTCCAGCTCTaGATTCCGGGTCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAARDSNATRRNVTWVEALLLQL*IPGLQV Trigger: GACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAG...TGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTGGGTAGAAGCAATCGACCGCAGCTGCTaGTCCAGCTCTGCATTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AAARDSNATRRNVTWVEAIDRSC*SSSAFR Trigger: CCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTCGAT...TGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCTTCTCCATCGACCGCAGCTaGTGCTCCAGCTCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSGSQSLCCPMGMTSAAFSIDRS*CSSSAF Trigger: GAATGCAGAGCTGGAGCAGCAGCTGCGGTCGATGGA...GAAGGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGAACTCTGCCTCCCACTaGACCTCCCCTACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSTGPSGLRIPKPLLPHGNSASH*TSPTEP Trigger: AGGCTCTGTAGGGGAGGTCCAGTGGGAGGCAGAGTT...CCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTGCAAACTGGGTCAGCTaGTGTTCAGAGGCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLQVSGSQSLCCPMGMTANWVS*CSEAKP Trigger: AGGCTTTGCCTCTGAACAGCAGCTGACCCAGTTTGC...AGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTTCCATCGACCGCAGCTaGTGCTCCAGCTCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: MGWDEYRAFRSQDPKASVSIDRS*CSSSAF Trigger: GAATGCAGAGCTGGAGCAGCAGCTGCGGTCGATGGA...AACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGAGACAGCTGCGAACATCCAGCAGCTaGGCAGCCCGGCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCPRILENSTQCKAQRQLRTSSS*AARPTS Trigger: GGAGGTGGGCCGGGCTGCGCAGCTGCTGGATGTTCG...CAGCTGTCTCTGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTGGGTAGAAGCAAACTCTGCCTCCCACTaGACCTCCCCTACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAARDSNATRRNVTWVEANSASH*TSPTEP Trigger: AGGCTCTGTAGGGGAGGTCCAGTGGGAGGCAGAGTT...TGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATCAACAAGCGGAAACAGATGATCCTGGAGGGGAAGGTAGTATAGGGAGGCTCTCCTGCCCGGACTaGCTCTACAGCCACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDQQAETDDPGGEGSIGRLSCPD*LYSHLG Trigger: GCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAG...CCTCCCTATACTACCTTCCCCTCCAGGATCATCTGTTTCCGCTTGTTGATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCTGGTGGTGGAGGAGGCTGAGGTTCTACAAATCCTCACGCAGGTCAACGCTCCACCGACTGGCTaGTTGCTTCTTTCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AELVVEEAEVLQILTQVNAPPTG*LLLSLL Trigger: CAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGC...GTTGACCTGCGTGAGGATTTGTAGAACCTCAGCCTCCTCCACCACCAGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCAGCTGCTCCACCGACTaGCTGGTTGCTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVSGSQSLCCPMGMTSAASCSTD*LVASFS Trigger: AGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCT...GGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACAGCTGCTCCACCGACTaGCTGGTTGCTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGPSGLRIPKPLLPHGDDSCSTD*LVASFS Trigger: AGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCT...GTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGTCGATCTGGAATACGTaGGCCCGGGTGCTGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: WGGMSTGPSGLRIPKPLLSIWNT*ARVLKI Trigger: AATCTTCAGCACCCGGGCGCACGTATTCCAGATCGA...CAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTGTGATGACAAGCATGTGCTGCCAAGCTTGGCAGCATTTTGCTTTTTCTGCCTCTGCCAGGCGTaGCAGGCCTTCACGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCCDDKHVLPSLAAFCFFCLCQA*QAFTQL Trigger: GAGCTGCGTGAAGGCCTGGCACGCCTGGCAGAGGCA...GAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTGGGTAGAAGCATCTCTCGAGCCAGCCTaGCAGCTTCTTTCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAARDSNATRRNVTWVEASLEPA*QLLSPP Trigger: AGGAGGTGAAAGAAGCTGCCAGGCTGGCTCGAGAGA...TGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGACCTGGAGGCCAAACGCAAAGCTGAGCTGGCCAAGATCAAGCAACAAAAACTCTGCCTCCCACTaGACCTCCCCTACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTWRPNAKLSWPRSSNKNSASH*TSPTEP Trigger: AGGCTCTGTAGGGGAGGTCCAGTGGGAGGCAGAGTT...TTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCACAGCTGCTCCACCGACTaGCTGGTTGCTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFGWIQTSRAGGAEGWLHSCSTD*LVASFS Trigger: AGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCT...GTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR TCA 90 bp | CCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCAATTCTCCACCATCTTaGGATTTCTCTCGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHLVGSRHPELGVQRAGCNSPPS*DFSRAS Trigger: GCTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATT...GCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGTGCTGTGATGACAATTCTCCACCATCTTaGGATTTCTCTCGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLERVIPLPPTSQCCDDNSPPS*DFSRAS Trigger: GCTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATT...GTCATCACAGCACTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR TCA 90 bp | CACGCAGGTCAACGTAGTGCGAAGGGAGTGCGAAATAGTAAGTGTGGCCAGCCTCGGGTGCCAGTGCTCTaGTTCTTCAAAGTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HAGQRSAKGVRNSKCGQPRVPVL*FFKVWI Trigger: GATCCAGACTTTGAAGAATCAGAGCACTGGCACCCG...AGGCTGGCCACACTTACTATTTCGCACTCCCTTCGCACTACGTTGACCTGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCCAAACGCAAAGCTGAGCTGGCCAAGATCAAGCAACAAAACCGACGCTTCGTTGGCTCGACTGTCTaGCCATTGCCCGAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAKRKAELAKIKQQNRRFVGSTV*PLPELL Trigger: CAGAAGTTCGGGCAATGGGCAGACAGTCGAGCCAAC...GAAGCGTCGGTTTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | AGAGATCAACAAGCGGAAACAGATGATCCTGGAGGGGAAGGTAGTATAGGGAGGAAGCGCGAAGAACTCTaGCTCCCACTGGACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDQQAETDDPGGEGSIGRKREEL*LPLDLP Trigger: GGGGAGGTCCAGTGGGAGGCAGAGTTCTTCGCGCTT...CCTCCCTATACTACCTTCCCCTCCAGGATCATCTGTTTCCGCTTGTTGATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGACCTGGAGGCCAAACGCAAAGCTGAGCTGGCCAAGATCAAGCAACAAATCTCTCGAGCCAGCCTaGCAGCTTCTTTCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTWRPNAKLSWPRSSNKSLEPA*QLLSPP Trigger: AGGAGGTGAAAGAAGCTGCCAGGCTGGCTCGAGAGA...TTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGACCTGGAGGCCAAACGCAAAGCTGAGCTGGCCAAGATCAAGCAACAAAGCTCCACCGACTGGCTaGTTGCTTCTTTCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQTWRPNAKLSWPRSSNKAPPTG*LLLSLL Trigger: CAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGC...TTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTCCAGGTCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGCGCCTCCTCCAGGTTaGACTCCATCGACCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVEALPKDSRKLYTVQSSAPPPG*TPSTAA Trigger: AGCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGC...TGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTAAATATCATCAGTCCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGCTAGGGTGCTGCCTCTaGCAGGCGTGCCAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLNIISPHLVGSRHPELGLGCCL*QACQAF Trigger: GAAGGCCTGGCACGCCTGGCAGAGGCAGCACCCTAG...CCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGGACTGATGATATTTAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCAGCACCTATGTCAGGAGCCTTAACCATGGCCCGTTCCTCCTGCTCCAGGCATACAAATATATCTaGGTCAGCTGCTGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APSTYVRSLNHGPFLLLQAYKYI*VSCCSE Trigger: CTCTGAACAGCAGCTGACCCAGATATATTTGTATGC...CTGGAGCAGGAGGAACGGGCCATGGTTAAGGCTCCTGACATAGGTGCTGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR GCA 90 bp | CACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGAGACAGCTGTCCATCGACCGCAGCTaGTGCTCCAGCTCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: HCPRILENSTQCKAQRQLSIDRS*CSSSAF Trigger: GAATGCAGAGCTGGAGCAGCAGCTGCGGTCGATGGA...CAGCTGTCTCTGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGCTGACCAAGGGGCTTaGAGGAACCTGATGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVEALPKDSRKLYTVQSSADQGA*RNLMGG Trigger: GCCTCCCATCAGGTTCCTCCAAGCCCCTTGGTCAGC...TGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGAGACATCCATCGACCGCAGCTaGTGCTCCAGCTCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: EALPKDSRKLYTVQSSETSIDRS*CSSSAF Trigger: GAATGCAGAGCTGGAGCAGCAGCTGCGGTCGATGGA...TGTCTCTGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCATCGATCTGGAATACGTaGGCCCGGGTGCTGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: WVEALPKDSRKLYTVQSSSIWNT*ARVLKI Trigger: AATCTTCAGCACCCGGGCGCACGTATTCCAGATCGA...TGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGACGTGAGTTCAGCTCCCAGCACCTATGTCAGGAGCCTTAACCATGGCCACACACATGGCCTGTaGACATACAAATGCATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKDVSSAPSTYVRSLNHGHTHGL*TYKCMQ Trigger: TTGCATGCATTTGTATGTGCACAGGCCATGTGTGTG...GCCATGGTTAAGGCTCCTGACATAGGTGCTGGGAGCTGAACTCACGTCTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR GCA 90 bp | TTTCTAAATATCATCAGTCCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGCAAACTGGGTCAGCTaGTGTTCAGAGGCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLNIISPHLVGSRHPELGANWVS*CSEAKP Trigger: AGGCTTTGCCTCTGAACAGCAGCTGACCCAGTTTGC...CCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGGACTGATGATATTTAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATGCTTCTAAAAGACGTGAGTTCAGCTCCCAGCACCTATGTCAGGAGCCTTATATCTGGGTCAGCTaGTGTTCAGAGGCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNASKRREFSSQHLCQEPYIWVS*CSEAKP Trigger: AGGCTTTGCCTCTGAACAGCAGCTGACCCAGATATA...AGGCTCCTGACATAGGTGCTGGGAGCTGAACTCACGTCTTTTAGAAGCATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAAATTCTCCACCATCTTaGGATTTCTCTCGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVEALPKDSRKLYTVQSSNSPPS*DFSRAS Trigger: GCTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATT...TGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGTACACATTTCGGGTTaGATCATAGAAATAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: WVEALPKDSRKLYTVQSSVHISG*IIEIGH Trigger: GTGTCCTATTTCTATGATGCAACCCGAAATGTGTAC...TGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS TCA 90 bp | AGGGTGCTGCCTCTGCCAGGCGTGCCAGGCCTTCACGCAGCTCGCTaGGCTCAAACAGCCGAACATCCAGCAGCTGCGCAGCCCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RVLPLPGVPGLHAAR*AQTAEHPAAAQPGP Trigger: TGGGCCGGGCTGCGCAGCTGCTGGATGTTCGGCTGTTTGAGCTCAGCGAGCTGCGTGAAGGCCTGGCACGCCTGGCAGAGGCAGCACCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS GCA 90 bp | TGGCCGCTGCGTTGGCCTCCCGAAGGGCTCCCGCCAACCTCTGGTTaGTGTCCTGAAGCGCGAAGAACTCTGCCTCCCACTGGACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WPLRWPPEGLPPTSG*CPEARRTLPPTGPP Trigger: GGGAGGTCCAGTGGGAGGCAGAGTTCTTCGCGCTTCAGGACAGCAACCAGAGGTTGGCGGGAGCCCTTCGGGAGGCCAACGCAGCGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS TCA 90 bp | GCGTTGGCCTCCCGAAGGGCTCCCGCCAACCTCTGGTTGCTGTCCTaGAGCGCGAAGAACTCTGCCTCCCACTGGACCTCCCCTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALASRRAPANLWLLS*SAKNSASHWTSPTE Trigger: CTCTGTAGGGGAGGTCCAGTGGGAGGCAGAGTTCTTCGCGCTTCAGGACAGCAACCAGAGGTTGGCGGGAGCCCTTCGGGAGGCCAACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 90 bp | CTCTCCTGCCCGGACTGGCTCTACAGCCACCTGGGCCTCCAGCTCTaGTACCCGCTGCCTCAAGAGTTCAGCCTCTGCACGTTGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSCPDWLYSHLGLQL*YPLPQEFSLCTLDL Trigger: GAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 90 bp | CTTGGTCTGCACCCGAGCCTCCAGCTGCTCCACCGACTGGCTGGTTaGTTCTTTCTCTCCTGCCCGGACTGGCTCTACAGCCACCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGLHPSLQLLHRLAG*FFLSCPDWLYSHLG Trigger: GCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGTGCAGACCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS TCA 90 bp | GACCGCAGCTGCTGCTCCAGCTCTGCATTCCGGGTCTCCAGGTCCTaGACTTGCTGCTGTGTCTCTTCGCGCTCGGCAGTGTCTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRSCCSSSAFRVSRS*TCCCVSSRSAVSGA Trigger: GGCTCCAGACACTGCCGAGCGCGAAGAGACACAGCAGCAAGTTCAGGACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 90 bp | AGCCTCCAGCTGCTCCACCGACTGGCTGGTTGCTTCTTTCTCTCCTaGCCGGACTGGCTCTACAGCCACCTGGGCCTCCAGCTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLQLLHRLAGCFFLS*PDWLYSHLGLQLCY Trigger: GTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCTGGAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 90 bp | CTCCTCCAGGTTGCACTCCATCGACCGCAGCTGCTGCTCCAGCTCTaGATTCCGGGTCTCCAGGTCCCGCTGCCTCAAGAGTTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLQVALHRPQLLLQL*IPGLQVPLPQEFSL Trigger: GAGGCTGAACTCTTGAGGCAGCGGGACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTCGATGGAGTGCAACCTGGAGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS CCA 90 bp | CACGTTGGACCTCCAGTTGTTGCCTCCACTGAGTGGCCGCTGCGTTaGCCTCCCGAAGGGCTCCCGCCAACCTCTGGTTGCTGTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HVGPPVVASTEWPLR*PPEGLPPTSGCCPE Trigger: TTCAGGACAGCAACCAGAGGTTGGCGGGAGCCCTTCGGGAGGCCAACGCAGCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CCA 90 bp | TCCTGGTCCTTGGTCTGCACCCGAGCCTCCAGCTGCTCCACCGACTaGCTGGTTGCTTCTTTCTCTCCTGCCCGGACTGGCTCTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SWSLVCTRASSCSTD*LVASFSPARTGSTA Trigger: GGCTGTAGAGCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGTGCAGACCAAGGACCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCGCGCCTCCTCCAGGTaGCACTCCATCGACCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGMSTGPSGLRIPKPLLPRASSR*HSIDRS Trigger: GCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGCG...GGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | GAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGACGCGCCTCCTCCAGGTaGCACTCCATCGACCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EYRAFRSQDPKASVAPWGRASSR*HSIDRS Trigger: GCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGCG...TCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS GCA 90 bp | TGCATTCCGGGTCTCCAGGTCCCGCTGCCTCAAGAGTTCAGCCTCTaGACGTTGGACCTCCAGTTGTTGCCTCCACTGAGTGGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CIPGLQVPLPQEFSL*TLDLQLLPPLSGRC Trigger: GCAGCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGACCTGGAGACCCGGAATGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS GCA 90 bp | CGCAGCTGCTGCTCCAGCTCTGCATTCCGGGTCTCCAGGTCCCGCTaGCTCAAGAGTTCAGCCTCTGCACGTTGGACCTCCAGTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSCCSSSAFRVSRSR*LKSSASARWTSSCC Trigger: GCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAGCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCTCCCAGCCACCGACTGGCTGGTaGCTTCTTTCTCTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWPGTQLERVIPLPPTSQPPTGW*LLSLLP Trigger: GGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGG...CTGGGAGGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCGCGCCTCCTCCAGGTaGCACTCCATCGACCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGGMSTGPSGLRIPKPLLRASSR*HSIDRS Trigger: GCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGCG...CAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS TCA 90 bp | TCTTCGCGCTCGGCAGTGTCTGGAGCCTCTCGGGTGCCAGTGCTCTaGTTCTTCAAAGTCTGGTCCTTGGTCTGCACCCGAGCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSAVSGASRVPVL*FFKVWSLVCTRASS Trigger: GCTGGAGGCTCGGGTGCAGACCAAGGACCAGACTTTGAAGAATCAGAGCACTGGCACCCGAGAGGCTCCAGACACTGCCGAGCGCGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140212.8 |
||
| CDS CCA 90 bp | GAGCCTCTCGGGTGCCAGTGCTCTGATTCTTCAAAGTCTGGTCCTTaGTCTGCACCCGAGCCTCCAGCTGCTCCACCGACTGGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPLGCQCSDSSKSGP*SAPEPPAAPPTGWL Trigger: CAACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGTGCAGACCAAGGACCAGACTTTGAAGAATCAGAGCACTGGCACCCGAGAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTACGGTAAGTGCGTGCTaGCCGGCGGGGATCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGLQVSGSQSLCCPMGMTTVSAC*PAGIQF Trigger: GAACTGGATCCCCGCCGGCAAGCACGCACTTACCGT...AGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTGGGTAGAAGCACGCGCCTCCTCCAGGTaGCACTCCATCGACCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAARDSNATRRNVTWVEARASSR*HSIDRS Trigger: GCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGCG...TGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS GCA 90 bp | CTCCTCCAGGTTGCACTCCATCGACCGCAGCTGCTGCTCCAGCTCTaGATTCCGGGTCTCCAGGTCCTGAACTTGCTGCTGTGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLQVALHRPQLLLQL*IPGLQVLNLLLCLF Trigger: GAAGAGACACAGCAGCAAGTTCAGGACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTCGATGGAGTGCAACCTGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGACGGTAAGTGCGTGCTaGCCGGCGGGGATCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSTGPSGLRIPKPLLPHGTVSAC*PAGIQF Trigger: GAACTGGATCCCCGCCGGCAAGCACGCACTTACCGT...CCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCCTCCAGGTCCTGAACTaGCTGCTGTGTCTCTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQSWPGTQLERVIPLPPTLQVLN*LLCLFA Trigger: CGCGAAGAGACACAGCAGCAAGTTCAGGACCTGGAG...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS TCA 90 bp | TCCTCGCCTGGACCATTGGTGCTGACCAAGGGGCTTGGAGGAACCTaGTGGGAGGCAAGGGCCAGGCCAGTACTAGTGAATTCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPGPLVLTKGLGGT*WEARARPVLVNSPP Trigger: TGGTGGAGAATTCACTAGTACTGGCCTGGCCCTTGCCTCCCATCAGGTTCCTCCAAGCCCCTTGGTCAGCACCAATGGTCCAGGCGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS TCA 90 bp | TCTTCGCGCTCGGCAGTGTCTGGAGCCTCTCGGGTGCCAGTGCTCTaGTTCTTCAAAGTCTGGATCTCCTGGTCCTTGGTCTGCACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSAVSGASRVPVL*FFKVWISWSLVCTR Trigger: TCGGGTGCAGACCAAGGACCAGGAGATCCAGACTTTGAAGAATCAGAGCACTGGCACCCGAGAGGCTCCAGACACTGCCGAGCGCGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS-3UTR CAA 90 bp | AAAGACGTGAGTTCAGCTCCCAGCACCTATGTCAGGAGCCTTAACCATGGCCCGACGGTAAGTGCGTGCTaGCCGGCGGGGATCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KDVSSAPSTYVRSLNHGPTVSAC*PAGIQF Trigger: GAACTGGATCCCCGCCGGCAAGCACGCACTTACCGT...CGGGCCATGGTTAAGGCTCCTGACATAGGTGCTGGGAGCTGAACTCACGTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR CAA 90 bp | CCACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCGGAGTGACAGTGCTGTaGATGATGGCCTTGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PHLVGSRHPELGVQRAGCGVTVL*MMALAP Trigger: GGGTGCCAAGGCCATCATCAACAGCACTGTCACTCC...GCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGGATGACTAGTGCAGCCCTCCAGGTCCTGAACTaGCTGCTGTGTCTCTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QVSGSQSLCCPMGMTSAALQVLN*LLCLFA Trigger: CGCGAAGAGACACAGCAGCAAGTTCAGGACCTGGAG...GGCTGCACTAGTCATCCCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAAAGTGGGGCAGACACTTCGGCGGCAGAAAGCAGGGAGCACTGTCCGATTCAAAGTCTGGTCCTaGGTCTGCACCCGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KEKVGQTLRRQKAGSTVRFKVWS*VCTRAS Trigger: GGAGGCTCGGGTGCAGACCAAGGACCAGACTTTGAA...TCGGACAGTGCTCCCTGCTTTCTGCCGCCGAAGTGTCTGCCCCACTTTCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140212.8 |
||
| CDS CCA 90 bp | GAACAGCTTTTCCTCGCCTGGACCATTGGTGCTGACCAAGGGGCTTaGAGGAACCTGATGGGAGGCAAGGGCCAGGCCAGTACTAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EQLFLAWTIGADQGA*RNLMGGKGQASTSE Trigger: TTCACTAGTACTGGCCTGGCCCTTGCCTCCCATCAGGTTCCTCCAAGCCCCTTGGTCAGCACCAATGGTCCAGGCGAGGAAAAGCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCCATGGGTCGACTGTCTGCCCATaGCCCGAACTTCTGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MSTGPSGLRIPKPLLPHGSTVCP*PELLRG Trigger: ACCTCTCAGAAGTTCGGGCAATGGGCAGACAGTCGA...CCCATGGGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | ACATTTGGTTGGATCCAGACATCCAGAGCTGGGGGTGCAGAGGGCTGGTTGCACTCGACTGTCTGCCCATaGCCCGAACTTCTGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TFGWIQTSRAGGAEGWLHSTVCP*PELLRG Trigger: ACCTCTCAGAAGTTCGGGCAATGGGCAGACAGTCGA...GTGCAACCAGCCCTCTGCACCCCCAGCTCTGGATGTCTGGATCCAACCAAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCAGGAGCCTTAACCATGGCCCGTTCCTCCTGCTCCAGGAGATCTGATGTCTCGACTGTCTGCCCATaGCCCGAACTTCTGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MSGALTMARSSCSRRSDVSTVCP*PELLRG Trigger: ACCTCTCAGAAGTTCGGGCAATGGGCAGACAGTCGA...GACATCAGATCTCCTGGAGCAGGAGGAACGGGCCATGGTTAAGGCTCCTGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR CAA 90 bp | ATGGGGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTTCGACTGTCTGCCCATaGCCCGAACTTCTGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MGWDEYRAFRSQDPKASVSTVCP*PELLRG Trigger: ACCTCTCAGAAGTTCGGGCAATGGGCAGACAGTCGA...AACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | CTACAGAGCTGGCCTGGAACTCAGCTGGAACGAGTGATCCCCCTGCCTCCAACCGAATTCTCCACCATCTaGAGATTTCTCTCGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQSWPGTQLERVIPLPPTEFSTI*RFLSSQ Trigger: CTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATTC...GGTTGGAGGCAGGGGGATCACTCGTTCCAGCTGAGTTCCAGGCCAGCTCTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCAAACGCAAAGCTGAGCTGGCCAAGATCAAGCAACAAAACCGACGCTTCCTCCAGGTCCTGAACTaGCTGCTGTGTCTCTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EAKRKAELAKIKQQNRRFLQVLN*LLCLFA Trigger: CGCGAAGAGACACAGCAGCAAGTTCAGGACCTGGAG...GAAGCGTCGGTTTTGTTGCTTGATCTTGGCCAGCTCAGCTTTGCGTTTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGATGAGTACAGGGCCTTCAGGTCTCAGGATCCCAAAGCCTCTGTTGCCCGAATTCTCCACCATCTaGAGATTTCTCTCGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGMSTGPSGLRIPKPLLPEFSTI*RFLSSQ Trigger: CTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATTC...GGGCAACAGAGGCTTTGGGATCCTGAGACCTGAAGGCCCTGTACTCATCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGAGACGGTAAGTGCGTGCTaGCCGGCGGGGATCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VEALPKDSRKLYTVQSSETVSAC*PAGIQF Trigger: GAACTGGATCCCCGCCGGCAAGCACGCACTTACCGT...CTCTGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCTGTGATGACAAGCATGTGCTGCCAAGCTTGGCAGCATTTTGCTTTTTCGGAGTGACAGTGCTGTaGATGATGGCCTTGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: QCCDDKHVLPSLAAFCFFGVTVL*MMALAP Trigger: GGGTGCCAAGGCCATCATCAACAGCACTGTCACTCC...GAAAAAGCAAAATGCTGCCAAGCTTGGCAGCACATGCTTGTCATCACAGCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGAATGCTTCTAAAAGACGTGAGTTCAGCTCCCAGCACCTATGTCAGGAGCGGAGTGACAGTGCTGTaGATGATGGCCTTGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LRMLLKDVSSAPSTYVRSGVTVL*MMALAP Trigger: GGGTGCCAAGGCCATCATCAACAGCACTGTCACTCC...GCTCCTGACATAGGTGCTGGGAGCTGAACTCACGTCTTTTAGAAGCATTCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087467.12 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGCCAGGGACAGCAACGCCACACGTAGAAATGTAACCTGGGTAGAAGCAGAATTCTCCACCATCTaGAGATTTCTCTCGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAARDSNATRRNVTWVEAEFSTI*RFLSSQ Trigger: CTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATTC...TGCTTCTACCCAGGTTACATTTCTACGTGTGGCGTTGCTGTCCCTGGCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCACCACCGACTGGCTGGTaGCTTCTTTCTCTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WVEALPKDSRKLYTVQSSPPTGW*LLSLLP Trigger: GGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGG...TGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGAGACACCACCGACTGGCTGGTaGCTTCTTTCTCTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EALPKDSRKLYTVQSSETPPTGW*LLSLLP Trigger: GGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGG...TGTCTCTGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCACTGTTGATGATGGCCTaGGCACCCCCGATGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WVEALPKDSRKLYTVQSSLLMMA*APPMLM Trigger: CATCAGCATCGGGGGTGCCAAGGCCATCATCAACAG...TGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAAGCACTGCCCAAGGATTCTAGAAAACTCTACACAGTGCAAAGCTCAGAGGGAGTGACAGTGCTGTaGATGATGGCCTTGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VEALPKDSRKLYTVQSSEGVTVL*MMALAP Trigger: GGGTGCCAAGGCCATCATCAACAGCACTGTCACTCC...CTCTGAGCTTTGCACTGTGTAGAGTTTTCTAGAATCCTTGGGCAGTGCTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | AGCTCGCTGAGCTCAAACAGCCGAACATCCAGCAGCTaGGCAGCCCGGCCCACCTCCGCCCGTGCGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSSNSRTSSS*AARPTSARARS Trigger: GGAGCGCGCACGGGCGGAGGTGGGCCGGGCTGCGCAGCTGCTGGATGTTCGGCTGTTTGAGCTCAGCGAGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | CGCGCCTCCTCCAGGTTGCACTCCATCGACCGCAGCTaGTGCTCCAGCTCTGCATTCCGGGTCTCCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RASSRLHSIDRS*CSSSAFRVSRS Trigger: GGACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAGCTGCGGTCGATGGAGTGCAACCTGGAGGAGGCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS TCA 72 bp | CCTCTGCCAGGCGTGCCAGGCCTTCACGCAGCTCGCTaGGCTCAAACAGCCGAACATCCAGCAGCTGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLPGVPGLHAAR*AQTAEHPAAAQ Trigger: CTGCGCAGCTGCTGGATGTTCGGCTGTTTGAGCTCAGCGAGCTGCGTGAAGGCCTGGCACGCCTGGCAGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | CCGGACTGGCTCTACAGCCACCTGGGCCTCCAGCTCTaGTACCCGCTGCCTCAAGAGTTCAGCCTCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: PDWLYSHLGLQL*YPLPQEFSLCT Trigger: CGTGCAGAGGCTGAACTCTTGAGGCAGCGGGTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGAGCCAGTCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 90 bp | CCGCTGCCTCAAGAGTTCAGCCTCTGCACGTTGGACCTCCAGTTGTaGCCTCCACTGAGTGGCCGCTGCGTTGGCCTCCCGAAGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLPQEFSLCTLDLQL*PPLSGRCVGLPKGS Trigger: GGAGCCCTTCGGGAGGCCAACGCAGCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 90 bp | CCGGGTCTCCAGGTCCCGCTGCCTCAAGAGTTCAGCCTCTGCACGTaGGACCTCCAGTTGTTGCCTCCACTGAGTGGCCGCTGCGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGLQVPLPQEFSLCT*DLQLLPPLSGRCVG Trigger: GCCAACGCAGCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGACCTGGAGACCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS TCA 72 bp | TCCCGAAGGGCTCCCGCCAACCTCTGGTTGCTGTCCTaGAGCGCGAAGAACTCTGCCTCCCACTGGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRAPANLWLLS*SAKNSASHWTS Trigger: GGAGGTCCAGTGGGAGGCAGAGTTCTTCGCGCTTCAGGACAGCAACCAGAGGTTGGCGGGAGCCCTTCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | CTGCTCCACCGACTGGCTGGTTGCTTCTTTCTCTCCTaGCCGGACTGGCTCTACAGCCACCTGGGCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLHRLAGCFFLS*PDWLYSHLGLQ Trigger: CTGGAGGCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | CACCCGAGCCTCCAGCTGCTCCACCGACTGGCTGGTTaGTTCTTTCTCTCCTGCCCGGACTGGCTCTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: HPSLQLLHRLAG*FFLSCPDWLYS Trigger: GCTGTAGAGCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CCA 72 bp | TTGGTCTGCACCCGAGCCTCCAGCTGCTCCACCGACTaGCTGGTTGCTTCTTTCTCTCCTGCCCGGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVCTRASSCSTD*LVASFSPARTG Trigger: GCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGTGCAGACCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 72 bp | GCACCCGAGCCTCCAGCTGCTCCACCGACTGGCTGGTaGCTTCTTTCTCTCCTGCCCGGACTGGCTCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: APEPPAAPPTGW*LLSLLPGLALQ Trigger: CTGTAGAGCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCGGTGGAGCAGCTGGAGGCTCGGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 90 bp | TACCCGCTGCCTCAAGAGTTCAGCCTCTGCACGTTGGACCTCCAGTaGTTGCCTCCACTGAGTGGCCGCTGCGTTGGCCTCCCGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: YPLPQEFSLCTLDLQ*LPPLSGRCVGLPKG Trigger: GCCCTTCGGGAGGCCAACGCAGCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 90 bp | CAGCTGCTGCTCCAGCTCTGCATTCCGGGTCTCCAGGTCCTGAACTaGCTGCTGTGTCTCTTCGCGCTCGGCAGTGTCTGGAGCCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QLLLQLCIPGLQVLN*LLCLFALGSVWSLS Trigger: CGAGAGGCTCCAGACACTGCCGAGCGCGAAGAGACACAGCAGCAAGTTCAGGACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 90 bp | CCGCTGCCTCAAGAGTTCAGCCTCTGCACGTTGGACCTCCAGTTGTaGCCTCCACTGAGTGGCCGCTGCGTTGGCCTCCCGAAGGGCTNN | + |
|
Preference number: 6 (lower is better) Translates to: PLPQEFSLCTLDLQL*PPLSGRCVGLPKGX Trigger: NNAGCCCTTCGGGAGGCCAACGCAGCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS GCA 72 bp | TCTACAGCCACCTGGGCCTCCAGCTCTGCTACCCGCTaGCTCAAGAGTTCAGCCTCTGCACGTTGGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: STATWASSSATR*LKSSASARWTS Trigger: GGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | TGCTCCAGCTCTGCATTCCGGGTCTCCAGGTCCCGCTaGCTCAAGAGTTCAGCCTCTGCACGTTGGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSSSAFRVSRSR*LKSSASARWTS Trigger: GGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGACCTGGAGACCCGGAATGCAGAGCTGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS CCA 72 bp | TTCCTCGCCTGGACCATTGGTGCTGACCAAGGGGCTTaGAGGAACCTGATGGGAGGCAAGGGCCAGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: FLAWTIGADQGA*RNLMGGKGQAS Trigger: ACTGGCCTGGCCCTTGCCTCCCATCAGGTTCCTCCAAGCCCCTTGGTCAGCACCAATGGTCCAGGCGAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CCA 72 bp | CGACTGGCTGGTTGCTTCTTTCTCTCCTGCCCGGACTaGCTCTACAGCCACCTGGGCCTCCAGCTCTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: RLAGCFFLSCPD*LYSHLGLQLCY Trigger: GTAGCAGAGCTGGAGGCCCAGGTGGCTGTAGAGCCAGTCCGGGCAGGAGAGAAAGAAGCAACCAGCCAGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 72 bp | CAGGTCCCGCTGCCTCAAGAGTTCAGCCTCTGCACGTaGGACCTCCAGTTGTTGCCTCCACTGAGTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QVPLPQEFSLCT*DLQLLPPLSGR Trigger: GCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS TCA 72 bp | TGCTGCTCCAGCTCTGCATTCCGGGTCTCCAGGTCCTaGACTTGCTGCTGTGTCTCTTCGCGCTCGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CCSSSAFRVSRS*TCCCVSSRSAV Trigger: CACTGCCGAGCGCGAAGAGACACAGCAGCAAGTTCAGGACCTGGAGACCCGGAATGCAGAGCTGGAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CCA 72 bp | CTTCTGACAGCATCTTCTTCAACCGTTCCCGCTCGGTaGGGCCAGGGGTGTCCGCACTCTGGCTACGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: LLTASSSTVPAR*GQGCPHSGYGT Trigger: TGTTCCGTAGCCAGAGTGCGGACACCCCTGGCCCCACCGAGCGGGAACGGTTGAAGAAGATGCTGTCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 72 bp | CCTCAAGAGTTCAGCCTCTGCACGTTGGACCTCCAGTaGTTGCCTCCACTGAGTGGCCGCTGCGTTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PQEFSLCTLDLQ*LPPLSGRCVGL Trigger: GAGGCCAACGCAGCGGCCACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000135368.2 ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | GGTCTCCAGGTCCCGCTGCCTCAAGAGTTCAGCCTCTaGACGTTGGACCTCCAGTTGTTGCCTCCACTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLQVPLPQEFSL*TLDLQLLPPLS Trigger: ACTCAGTGGAGGCAACAACTGGAGGTCCAACGTGCAGAGGCTGAACTCTTGAGGCAGCGGGACCTGGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135368.2 |
||
| CDS GCA 72 bp | CGCGCTCGGCAGTGTCTGGAGCCTCTCGGGTGCCAGTaGTCTGATTCTTCAAAGTCTGGTCCTTGGTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RARQCLEPLGCQ*SDSSKSGPWSA Trigger: TGCAGACCAAGGACCAGACTTTGAAGAATCAGAGCACTGGCACCCGAGAGGCTCCAGACACTGCCGAGCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140212.8 |
||
| CDS CCA 72 bp | GTCCGCACTCTGGCTACGGAACAGCTTTTCCTCGCCTaGACCATTGGTGCTGACCAAGGGGCTTGGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VRTLATEQLFLA*TIGADQGAWRN Trigger: GTTCCTCCAAGCCCCTTGGTCAGCACCAATGGTCCAGGCGAGGAAAAGCTGTTCCGTAGCCAGAGTGCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CCA 72 bp | GGGTGCCAGTGCTCTGATTCTTCAAAGTCTGGTCCTTaGTCTGCACCCGAGCCTCCAGCTGCTCCACCGACT | + |
|
Preference number: 6 (lower is better) Translates to: GCQCSDSSKSGP*SAPEPPAAPPT Trigger: AGTCGGTGGAGCAGCTGGAGGCTCGGGTGCAGACCAAGGACCAGACTTTGAAGAATCAGAGCACTGGCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140212.8 |
||
| CDS TCA 72 bp | TCGGCAGTGTCTGGAGCCTCTCGGGTGCCAGTGCTCTaGTTCTTCAAAGTCTGGTCCTTGGTCTGCACCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SAVSGASRVPVL*FFKVWSLVCTR Trigger: TCGGGTGCAGACCAAGGACCAGACTTTGAAGAATCAGAGCACTGGCACCCGAGAGGCTCCAGACACTGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140212.8 |
||
| CDS GCA 72 bp | TCTCTTCGCGCTCGGCAGTGTCTGGAGCCTCTCGGGTaGCAGTGCTCTGATTCTTCAAAGTCTGGATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLRARQCLEPLG*QCSDSSKSGSP Trigger: AGGAGATCCAGACTTTGAAGAATCAGAGCACTGGCACCCGAGAGGCTCCAGACACTGCCGAGCGCGAAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS CCA 72 bp | GCTGTTCAGAGGCAAAGCCTAGGCCGTAGACAGTGTTaGCTCGACTGTCTGCCCATTGCCCGAACTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AVQRQSLGRRQC*LDCLPIARTSE Trigger: CTCAGAAGTTCGGGCAATGGGCAGACAGTCGAGCCAACACTGTCTACGGCCTAGGCTTTGCCTCTGAACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003669.8 ENSMUST00000087467.12 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CCA 72 bp | TGCTCTGATTCTTCAAAGTCTGGATCTCCTGGTCCTTaGTCTGCACCCGAGCCTCCAGCTGCTCCACCGACT | + |
|
Preference number: 6 (lower is better) Translates to: CSDSSKSGSPGP*SAPEPPAAPPT Trigger: AGTCGGTGGAGCAGCTGGAGGCTCGGGTGCAGACCAAGGACCAGGAGATCCAGACTTTGAAGAATCAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 |
||
| CDS CCA 72 bp | AACTTGCTGCTGTGTCTCTTCGCGCTCGGCAGTGTCTaGAGCCTCTCGGGTGCCAGTGCTCTGATTCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: NLLLCLFALGSV*SLSGASALILQ Trigger: TTGAAGAATCAGAGCACTGGCACCCGAGAGGCTCCAGACACTGCCGAGCGCGAAGAGACACAGCAGCAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS CAA 90 bp | ATGGGAGGCAAGGGCCAGGCCAGTACTAGTGAATTCTCCACCATCTaGAGATTTCTCTCGAGCCAGCCTGGCAGCTTCTTTCACCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MGGKGQASTSEFSTI*RFLSSQPGSFFHLL Trigger: CAGGAGGTGAAAGAAGCTGCCAGGCTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATTCACTAGTACTGGCCTGGCCCTTGCCTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||
| CDS TCA 72 bp | AGGGCCAGGCCAGTACTAGTGAATTCTCCACCATCTTaGGATTTCTCTCGAGCCAGCCTGGCAGCTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RARPVLVNSPPS*DFSRASLAASF Trigger: GAAAGAAGCTGCCAGGCTGGCTCGAGAGAAATCTCAAGATGGTGGAGAATTCACTAGTACTGGCCTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003669.8 ENSMUST00000110124.9 ENSMUST00000140212.8 |
||