Pregenerated sensors for HOMER2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025813Ensembl transcript IDs: ENSMUST00000026922.15, ENSMUST00000098326.3, ENSMUST00000207371.2, ENSMUST00000207983.2, ENSMUST00000208937.2
Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGTAAAGAGCAGTGGCTGGTGCTCCCTGAAGGGCAGCATCGCTTaGGCTCCTCCCAGACCGCCCAGTTTCCAAGCACGCACCTGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: PVKSSGWCSLKGSIA*APPRPPSFQARTWL Trigger: CAGCCAGGTGCGTGCTTGGAAACTGGGCGGTCTGGGAGGAGCTCAAGCGATGCTGCCCTTCAGGGAGCACCAGCCACTGCTCTTTACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | ATAGAGCAGGCAAGCCTGGACTCCGCTGTGGTCCACGTGGGCCTCTaGAGGGGTCCCTGTGACTCAGAGGCCACTCCACAGCAAGTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: IEQASLDSAVVHVGL*RGPCDSEATPQQVL Trigger: TAGCACTTGCTGTGGAGTGGCCTCTGAGTCACAGGGACCCCTGCAGAGGCCCACGTGGACCACAGCGGAGTCCAGGCTTGCCTGCTCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | AGAGCAGCTAGTTCCCTCTGTGGACAGCCAGGCATGCATGCAAACTaGTCTAGGCACTGGATGAGTCTGCACCTCCCCAACTGTGGCTCG | + |
|
Preference number: 1 (lower is better) Translates to: RAASSLCGQPGMHAN*SRHWMSLHLPNCGS Trigger: CGAGCCACAGTTGGGGAGGTGCAGACTCATCCAGTGCCTAGAGCAGTTTGCATGCATGCCTGGCTGTCCACAGAGGGAACTAGCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 90 bp | CCGAGAGCGCTCCTTCTACCTGATAATGGAAGCTCATCTGAAGCCTaGGCTGACAGCCCCAGTGTCCACTGCTCTTGGGAGCCATGTGTC | + |
|
Preference number: 1 (lower is better) Translates to: PRALLLPDNGSSSEA*ADSPSVHCSWEPCV Trigger: GACACATGGCTCCCAAGAGCAGTGGACACTGGGGCTGTCAGCTCAGGCTTCAGATGAGCTTCCATTATCAGGTAGAAGGAGCGCTCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | CCACACCTCTCACACACACTTGCTCCGCCCCGCCCTAGTTATCTGTaGCTAACTTGGAGAGTCCTCTACGGAAGTCATGGAGGTCGTCGA | + |
|
Preference number: 1 (lower is better) Translates to: PHLSHTLAPPRPSYL*LTWRVLYGSHGGRR Trigger: TCGACGACCTCCATGACTTCCGTAGAGGACTCTCCAAGTTAGGCACAGATAACTAGGGCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR CCA 90 bp | CAGGAGACCCAAGAGCCCACGCTGCTGGCCACAGCTGGGTTACTCTaGGCTACTCTGCCTCCACTTCCTGTTGATAATCTCTGCCAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: QETQEPTLLATAGLL*ATLPPLPVDNLCQV Trigger: AACTTGGCAGAGATTATCAACAGGAAGTGGAGGCAGAGTAGCCCAGAGTAACCCAGCTGTGGCCAGCAGCGTGGGCTCTTGGGTCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | TCCCTCTGTGGACAGCCAGGCATGCATGCAAACTGCTCTAGGCACTaGATGAGTCTGCACCTCCCCAACTGTGGCTCGTCTGTTCTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: SLCGQPGMHANCSRH*MSLHLPNCGSSVLF Trigger: GAACAGAACAGACGAGCCACAGTTGGGGAGGTGCAGACTCATCCAGTGCCTAGAGCAGTTTGCATGCATGCCTGGCTGTCCACAGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | CCTGCCATCATGCTGCTTAAGGCTATGTCTGTGGAGCAAGCAGGCTaGAGAGCAGCTAGTTCCCTCTGTGGACAGCCAGGCATGCATGCA | + |
|
Preference number: 1 (lower is better) Translates to: PAIMLLKAMSVEQAG*RAASSLCGQPGMHA Trigger: TGCATGCATGCCTGGCTGTCCACAGAGGGAACTAGCTGCTCTCCAGCCTGCTTGCTCCACAGACATAGCCTTAAGCAGCATGATGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 90 bp | TCTGTGGACAGCCAGGCATGCATGCAAACTGCTCTAGGCACTGGATaGGTCTGCACCTCCCCAACTGTGGCTCGTCTGTTCTGTTCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: SVDSQACMQTALGTG*VCTSPTVARLFCSC Trigger: ACAGGAACAGAACAGACGAGCCACAGTTGGGGAGGTGCAGACTCATCCAGTGCCTAGAGCAGTTTGCATGCATGCCTGGCTGTCCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | AAGAGCCCACGCTGCTGGCCACAGCTGGGTTACTCTGGGCTACTCTaGCTCCACTTCCTGTTGATAATCTCTGCCAAGTTCTCTCACCCA | + |
|
Preference number: 1 (lower is better) Translates to: KSPRCWPQLGYSGLL*LHFLLIISAKFSHP Trigger: TGGGTGAGAGAACTTGGCAGAGATTATCAACAGGAAGTGGAGGCAGAGTAGCCCAGAGTAACCCAGCTGTGGCCAGCAGCGTGGGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | ATGCAGTACCTGCACCTGCCATCATGCTGCTTAAGGCTATGTCTGTaGAGCAAGCAGGCTGGAGAGCAGCTAGTTCCCTCTGTGGACAGC | + |
|
Preference number: 1 (lower is better) Translates to: MQYLHLPSCCLRLCL*SKQAGEQLVPSVDS Trigger: GCTGTCCACAGAGGGAACTAGCTGCTCTCCAGCCTGCTTGCTCCACAGACATAGCCTTAAGCAGCATGATGGCAGGTGCAGGTACTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 90 bp | CTAACCCAGTCTATGTTCTCTTGGTGCACCAGTAGCAGCTGCTACTaGCTTGAGAACTATTGGGAGCTGTGGGGAACGGCAGCACCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LTQSMFSWCTSSSCY*LENYWELWGTAAPW Trigger: CCAGGGTGCTGCCGTTCCCCACAGCTCCCAATAGTTCTCAAGTCAGTAGCAGCTGCTACTGGTGCACCAAGAGAACATAGACTGGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | ACAATGCTCTCCTGGTATCCAGAAAGTCTCCAACTCCAGGCCCTCTaGCTGGAAGAGAAGGAAGGTCCCACAGGCAATGTCCTCCAGGAT | + |
|
Preference number: 1 (lower is better) Translates to: TMLSWYPESLQLQAL*LEEKEGPTGNVLQD Trigger: ATCCTGGAGGACATTGCCTGTGGGACCTTCCTTCTCTTCCAGGCAGAGGGCCTGGAGTTGGAGACTTTCTGGATACCAGGAGAGCATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 90 bp | GGAGCTGTGGGGAACGGCAGCACCCTGGCTGAATTACATCAGAGGTaGCCACTCTGTTGTATAAAGCATCCCAAATTGATGGGGTCACCC | + |
|
Preference number: 1 (lower is better) Translates to: GAVGNGSTLAELHQR*PLCCIKHPKLMGSP Trigger: GGGTGACCCCATCAATTTGGGATGCTTTATACAACAGAGTGGTCACCTCTGATGTAATTCAGCCAGGGTGCTGCCGTTCCCCACAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | TCACACACACTTGCTCCGCCCCGCCCTAGTTATCTGTGCCTAACTTaGAGAGTCCTCTACGGAAGTCATGGAGGTCGTCGATCTTTCCAT | + |
|
Preference number: 1 (lower is better) Translates to: SHTLAPPRPSYLCLT*RVLYGSHGGRRSFH Trigger: ATGGAAAGATCGACGACCTCCATGACTTCCGTAGAGGACTCTCCAAGTTAGGCACAGATAACTAGGGCGGGGCGGAGCAAGTGTGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR GCA 90 bp | GCCTCTGCAGGGGTCCCTGTGACTCAGAGGCCACTCCACAGCAAGTaGTACACTGTCAAAGAGAACTGTACAAGTTCACACAAACCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: ASAGVPVTQRPLHSK*YTVKENCTSSHKPK Trigger: TTTGGGTTTGTGTGAACTTGTACAGTTCTCTTTGACAGTGTAGCACTTGCTGTGGAGTGGCCTCTGAGTCACAGGGACCCCTGCAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | TGCTCAAGGCATTCTGAAGTGTTGGGGGTCAGGGTTAACAAACCTTaGCTCCTGTGTGCAAACTCTCCTAAAGAGGAATGCCTGTGGACC | + |
|
Preference number: 1 (lower is better) Translates to: CSRHSEVLGVRVNKP*LLCANSPKEECLWT Trigger: GGTCCACAGGCATTCCTCTTTAGGAGAGTTTGCACACAGGAGGCAAGGTTTGTTAACCCTGACCCCCAACACTTCAGAATGCCTTGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | CTCTCACACTCATATCAAATGCAGTACCTGCACCTGCCATCATGCTaGTTAAGGCTATGTCTGTGGAGCAAGCAGGCTGGAGAGCAGCTA | + |
|
Preference number: 1 (lower is better) Translates to: LSHSYQMQYLHLPSC*LRLCLWSKQAGEQL Trigger: TAGCTGCTCTCCAGCCTGCTTGCTCCACAGACATAGCCTTAAGCAGCATGATGGCAGGTGCAGGTACTGCATTTGATATGAGTGTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | CAGAGGAAAGGTCACAGGCCTACAGCAAGAGCTACCCTGTCTCTGTaGAAGAAGTCAGCATGGCCTGTAACATGGAAAGCTGGAGAAATG | + |
|
Preference number: 1 (lower is better) Translates to: QRKGHRPTARATLSL*KKSAWPVTWKAGEM Trigger: CATTTCTCCAGCTTTCCATGTTACAGGCCATGCTGACTTCTTGCACAGAGACAGGGTAGCTCTTGCTGTAGGCCTGTGACCTTTCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | ATTTCTTCTTGGCACCTAAGGGACACCAAAGGGAGAGTGACAATATaGCTCATAGGAGAGCAGCGGATCAAGGTCCAGGAGACCCAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: ISSWHLRDTKGRVTI*LIGEQRIKVQETQE Trigger: CTCTTGGGTCTCCTGGACCTTGATCCGCTGCTCTCCTATGAGCCATATTGTCACTCTCCCTTTGGTGTCCCTTAGGTGCCAAGAAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 90 bp | GCCTGTGGACCTGAAAGTCCAATGGTTCCTTTAAGAAGTTCTCTGTaGGCAGAGAGCTTTTTGGCTGCAGGCCCTTCCTTAGCAGGAACT | + |
|
Preference number: 1 (lower is better) Translates to: ACGPESPMVPLRSSL*AESFLAAGPSLAGT Trigger: AGTTCCTGCTAAGGAAGGGCCTGCAGCCAAAAAGCTCTCTGCTCACAGAGAACTTCTTAAAGGAACCATTGGACTTTCAGGTCCACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | GCTAAAGCAACAAAATGCATACTGGGAAAAGATGCTCCCTCCACATaGCCGTGGTCTAGAACCTGCTGGAGAGTCACATACACTGAATGC | + |
|
Preference number: 1 (lower is better) Translates to: AKATKCILGKDAPST*PWSRTCWRVTYTEC Trigger: GCATTCAGTGTATGTGACTCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTGCTTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR GCA 90 bp | AGGTTTTCTTGGCCTCTTTTAGGTTCCATGTGGATGGCTGCAGAATaGAAGCTAAGCAAGGTGCAGACTGCTAGTCTCAGAGATGCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: RFSWPLLGSMWMAAE*KLSKVQTASLRDAK Trigger: CTTGGCATCTCTGAGACTAGCAGTCTGCACCTTGCTTAGCTTGCATTCTGCAGCCATCCACATGGAACCTAAAAGAGGCCAAGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 90 bp | AGAATCATGATGTCTTTAGAGGAAGCAGATGAAAGGGAGGTTCCGTaGTTGCTTGGGGCTTTAGCTGTGGAGCCTAAATCACTCTTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: RIMMSLEEADEREVP*LLGALAVEPKSLFR Trigger: CCTGAAGAGTGATTTAGGCTCCACAGCTAAAGCCCCAAGCAAGCACGGAACCTCCCTTTCATCTGCTTCCTCTAAAGACATCATGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | ACGGGGTTAACAGTGTTACAATTGGATGGGATGCTGAAAAGCCACTaGGGTGGGTTAACAGTGGTTACAATCAGACCGTGGAACAATAGG | + |
|
Preference number: 1 (lower is better) Translates to: TGLTVLQLDGMLKSH*GGLTVVTIRPWNNR Trigger: CCTATTGTTCCACGGTCTGATTGTAACCACTGTTAACCCACCCCAGTGGCTTTTCAGCATCCCATCCAATTGTAACACTGTTAACCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | CGTGGGTTAACAGTGCTACAATCAGATGGAATGCTGAAGACCCACTaGGTTAACAGTGATACAATTGGATGGGATGCTGAAAAGCCACGG | + |
|
Preference number: 1 (lower is better) Translates to: RGLTVLQSDGMLKTH*VNSDTIGWDAEKPR Trigger: CCGTGGCTTTTCAGCATCCCATCCAATTGTATCACTGTTAACCCAGTGGGTCTTCAGCATTCCATCTGATTGTAGCACTGTTAACCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | GGAGATGTAAGAAACATCTTCCTGCTGTCACATTCACTGTCACAATaGAGTGACAGTCAGGCCTTCTTATCAAAACTGGTACAGGACAGA | + |
|
Preference number: 1 (lower is better) Translates to: GDVRNIFLLSHSLSQ*SDSQAFLSKLVQDR Trigger: TCTGTCCTGTACCAGTTTTGATAAGAAGGCCTGACTGTCACTCCATTGTGACAGTGAATGTGACAGCAGGAAGATGTTTCTTACATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 90 bp | CCTTATGTTGCAAGTGCTTCAAAATCCAGTGATGTTCCCAAGAATTaGGTGAGTGTAACTTCTAGTGACCCACTTCAGTTACCAGTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: PYVASASKSSDVPKN*VSVTSSDPLQLPVK Trigger: CTTTACTGGTAACTGAAGTGGGTCACTAGAAGTTACACTCACTCAATTCTTGGGAACATCACTGGATTTTGAAGCACTTGCAACATAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | ATGTCAGAACCATGTTACTGTGTCCTGACTACAAGAGTAGAAAACTaGAAACAGCTTAACTATCCAAGGAATGTTACACAGCTGTTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: MSEPCYCVLTTRVEN*KQLNYPRNVTQLLK Trigger: TTTTAACAGCTGTGTAACATTCCTTGGATAGTTAAGCTGTTTCCAGTTTTCTACTCTTGTAGTCAGGACACAGTAACATGGTTCTGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 90 bp | AATGAAATTCAGACCAAAAGGATTAGGATAAAAAGAATCAGTGACTaGCTGGACACAATGAAATGGACTTGTGTGCAGACACACTCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: NEIQTKRIRIKRISD*LDTMKWTCVQTHSF Trigger: AAAAGAGTGTGTCTGCACACAAGTCCATTTCATTGTGTCCAGCCAGTCACTGATTCTTTTTATCCTAATCCTTTTGGTCTGAATTTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGCTAGAGGGAGCACGGTGCTCACAGACACGGCGCTCACAGAGCGGAGGTGCACCTGGCTGCACGTaGGGTCTAAGTTGGGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TELEGARCSQTRRSQSGGAPGCT*GLSWVS Trigger: TGAGACCCAACTTAGACCTCACGTGCAGCCAGGTGC...ACCTCCGCTCTGTGAGCGCCGTGTCTGTGAGCACCGTGCTCCCTCTAGCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CAA 90 bp | CCGCCCAGTTTCCAAGCACGCACCTGGCTGCACGTGAGGTCTAAGTaGGGTCTCATTCACAGTCGCCACTGGTGTCTGCAGGGGTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PPSFQARTWLHVRSK*GLIHSRHWCLQGSW Trigger: CCAAGACCCCTGCAGACACCAGTGGCGACTGTGAATGAGACCCAACTTAGACCTCACGTGCAGCCAGGTGCGTGCTTGGAAACTGGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGCAGGCTGGAGAGCAGCTAGTTCCCTCTGTGGACAGCCAGGCATGCATGCAATCTGACTCCAGGCTCTaGAGGCAGCACTCTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KQAGEQLVPSVDSQACMQSDSRL*RQHSVA Trigger: GGCCACAGAGTGCTGCCTGCAGAGCCTGGAGTCAGA...TTGCATGCATGCCTGGCTGTCCACAGAGGGAACTAGCTGCTCTCCAGCCTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGCTAGAGGGAGCACGGTGCTCACAGACACGGCGCTCACAGAGCGGAGGTCTTTTGGGCTGCATGTaGGCTCTCTCACACTCATAT | + |
|
Preference number: 2 (lower is better) Translates to: TELEGARCSQTRRSQSGGLLGCM*ALSHSY Trigger: ATATGAGTGTGAGAGAGCTCACATGCAGCCCAAAAG...ACCTCCGCTCTGTGAGCGCCGTGTCTGTGAGCACCGTGCTCCCTCTAGCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGCTAGAGGGAGCACGGTGCTCACAGACACGGCGCTCACAGAGCGGAGGTGCCATTCCTGGGCCATaGCTGTTCTTAAAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TELEGARCSQTRRSQSGGAIPGP*LFLKRK Trigger: CTTTCTTTTTAAGAACAGTCATGGCCCAGGAATGGC...ACCTCCGCTCTGTGAGCGCCGTGTCTGTGAGCACCGTGCTCCCTCTAGCTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | AATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGGCTTCCAGCTGTCCATaGCCTCACAAAGCCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NGECPTSTTPLTHTCSAPASSCP*PHKARE Trigger: TTCTCTGGCTTTGTGAGGTCATGGACAGCTGGAAGC...CGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGCTAGAGGGAGCACGGTGCTCACAGACACGGCGCTCACAGAGCGGAGGTTCAGCACAACAAAGATaGTGTGTTATTCAACAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TELEGARCSQTRRSQSGGSAQQR*CVIQQG Trigger: CCCTTGTTGAATAACACATCATCTTTGTTGTGCTGA...ACCTCCGCTCTGTGAGCGCCGTGTCTGTGAGCACCGTGCTCCCTCTAGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGGAGAGTCACACGCCCTAGTTATCTGTaGCTAACTTGGAGAGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GKDAPSTCPWSRTCWRVTRPSYL*LTWRVL Trigger: GAGGACTCTCCAAGTTAGGCACAGATAACTAGGGCG...TGTGACTCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGAGCAGCGGATCAAGGTCCAGGAGACCCAAGAGCCCACGCTGCTGGCCACATTTACAGAAGCAAATaGAGAATGTCCTACGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: RRAADQGPGDPRAHAAGHIYRSK*RMSYVY Trigger: GTAGACGTAGGACATTCTCCATTTGCTTCTGTAAAT...GTGGCCAGCAGCGTGGGCTCTTGGGTCTCCTGGACCTTGATCCGCTGCTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTTACCAGTAAAGAGCAGTGGCTGGTGCTCCCTGAAGGGCAGCATCGCTTGTACTCTGGGCTACTCTaGCTCCACTTCCTGTTGATA | + |
|
Preference number: 2 (lower is better) Translates to: SVTSKEQWLVLPEGQHRLYSGLL*LHFLLI Trigger: TATCAACAGGAAGTGGAGGCAGAGTAGCCCAGAGTA...CAAGCGATGCTGCCCTTCAGGGAGCACCAGCCACTGCTCTTTACTGGTAACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CAA 90 bp | CACCTGAGGGGCTCTCATCCTCATGGCGTGAAGGATGGCTTTGTATaGTTCAAACCTATTACAGGAAGCCCAGCCTGTCTTCTAAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HLRGSHPHGVKDGFV*FKPITGSPACLLSP Trigger: TGGGCTTAGAAGACAGGCTGGGCTTCCTGTAATAGGTTTGAACAATACAAAGCCATCCTTCACGCCATGAGGATGAGAGCCCCTCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCCACAGTCTGTGCCTCAGAGCCAAGTCTAGGTTTGAGAACAGCAAACTGCATGCTTCCAGCTGTCCATaGCCTCACAAAGCCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CHSLCLRAKSRFENSKLHASSCP*PHKARE Trigger: TTCTCTGGCTTTGTGAGGTCATGGACAGCTGGAAGC...ATGCAGTTTGCTGTTCTCAAACCTAGACTTGGCTCTGAGGCACAGACTGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAAATTTAAGGCTAGTGTGGTCTACACAGGAGCTCCAGGCTAGCCACAGTTATGCTCTAGGCACTGGATaGGTCTGCACCTCCCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: TNLRLVWSTQELQASHSYALGTG*VCTSPT Trigger: AGTTGGGGAGGTGCAGACTCATCCAGTGCCTAGAGC...ATAACTGTGGCTAGCCTGGAGCTCCTGTGTAGACCACACTAGCCTTAAATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTGAAAAGCCACTGGGGTGGGTTAACAGTGGTTACAATCAGACCGTGGAACCATTGCCACAGTCTGTaGCTCAGAGCCAAGTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: MLKSHWGGLTVVTIRPWNHCHSL*LRAKSR Trigger: CCTAGACTTGGCTCTGAGGCACAGACTGTGGCAATG...GTTCCACGGTCTGATTGTAACCACTGTTAACCCACCCCAGTGGCTTTTCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCAGCTCCCCCTTCAGGTaGCGCTGTCGGTATTTACTC | + |
|
Preference number: 2 (lower is better) Translates to: TEANGECPTSTTPLTHTCSSPFR*RCRYLL Trigger: GAGTAAATACCGACAGCGCCACCTGAAGGGGGAGCT...GCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR CAA 90 bp | ATCATGATGTCTTTAGAGGAAGCAGATGAAAGGGAGGTTCCGTGCTaGCTTGGGGCTTTAGCTGTGGAGCCTAAATCACTCTTCAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: IMMSLEEADEREVPC*LGALAVEPKSLFRG Trigger: GCCCCTGAAGAGTGATTTAGGCTCCACAGCTAAAGCCCCAAGCAAGCACGGAACCTCCCTTTCATCTGCTTCCTCTAAAGACATCATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CAA 90 bp | GTCAGAAATGCATGCGGATCACGGCTAAAGGGCTCTGAGGTTTTCTaGGCCTCTTTTAGGTTCCATGTGGATGGCTGCAGAATGCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VRNACGSRLKGSEVF*ASFRFHVDGCRMQA Trigger: AGCTTGCATTCTGCAGCCATCCACATGGAACCTAAAAGAGGCCAAGAAAACCTCAGAGCCCTTTAGCCGTGATCCGCATGCATTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTAAAATCAGATAGGGATGCTGAAGAGTCACGTGGGTTAACAGTGCTACAAAGCTCATCTGAAGCCTaGGCTGACAGCCCCAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLKSDRDAEESRGLTVLQSSSEA*ADSPSV Trigger: GACACTGGGGCTGTCAGCTCAGGCTTCAGATGAGCT...TTGTAGCACTGTTAACCCACGTGACTCTTCAGCATCCCTATCTGATTTTAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACACAATGAAATGGACTTGTGTGCAGACACACTCTTTTACGCAGATAAAAATGTCCACGTGGGCCTCTaGAGGGGTCCCTGTGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: GHNEMDLCADTLFYADKNVHVGL*RGPCDS Trigger: TGAGTCACAGGGACCCCTGCAGAGGCCCACGTGGAC...ATTTTTATCTGCGTAAAAGAGTGTGTCTGCACACAAGTCCATTTCATTGTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAAATTTAAGGCTAGTGTGGTCTACACAGGAGCTCCAGGCTAGCCACAGTTATGGAACGGCAGCACCCTaGCTGAATTACATCAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TNLRLVWSTQELQASHSYGTAAP*LNYIRG Trigger: ACCTCTGATGTAATTCAGCCAGGGTGCTGCCGTTCC...ATAACTGTGGCTAGCCTGGAGCTCCTGTGTAGACCACACTAGCCTTAAATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CAA 90 bp | CTCCATGCCGTCACACCCACTGTCCCCAGAATACAGTCTGTTTCTTaGAGGGAAGCCATGTATTCAGAAGTCACGGTCTATTTAGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LHAVTPTVPRIQSVS*REAMYSEVTVYLGH Trigger: ATGACCTAAATAGACCGTGACTTCTGAATACATGGCTTCCCTCAAAGAAACAGACTGTATTCTGGGGACAGTGGGTGTGACGGCATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTTTGTCTTCCAAGTTTTaGTTGTCTCTTTCGGCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: QKQMENVLRLPHLSHTLALSSKF*LSLSAA Trigger: GGCGGCCGAAAGAGACAATCAAAACTTGGAAGACAA...AGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAAGCTCATCTGAAGCCTGAGCTGACAGCCCCAGTGTCCACTGCTCTTGGGAAACAAGAACATTGCTaGAATCACAATAAATCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: MEAHLKPELTAPVSTALGKQEHC*NHNKSG Trigger: CCCTGATTTATTGTGATTGCAGCAATGTTCTTGTTT...CCCAAGAGCAGTGGACACTGGGGCTGTCAGCTCAGGCTTCAGATGAGCTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAAATTTAAGGCTAGTGTGGTCTACACAGGAGCTCCAGGCTAGCCACAGTTATAGCATTAGCTACACTTaGAGAGGGCCTGGGTTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: TNLRLVWSTQELQASHSYSISYT*RGPGFD Trigger: GTCAAACCCAGGCCCTCTGCAAGTGTAGCTAATGCT...ATAACTGTGGCTAGCCTGGAGCTCCTGTGTAGACCACACTAGCCTTAAATTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGGAGAGTCACAATTTACAGAAGCAAATaGAGAATGTCCTACGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GKDAPSTCPWSRTCWRVTIYRSK*RMSYVY Trigger: GTAGACGTAGGACATTCTCCATTTGCTTCTGTAAAT...TGTGACTCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCTGGTCAGTGTGGGAAGGCAAGCAAGAGAAAAATCGGGAAATATTATCATGCACCTCCCCAACTGTaGCTCGTCTGTTCTGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RSGQCGKASKRKIGKYYHAPPQL*LVCSVP Trigger: AGGAACAGAACAGACGAGCCACAGTTGGGGAGGTGC...ATGATAATATTTCCCGATTTTTCTCTTGCTTGCCTTCCCACACTGACCAGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGAAAAGCCACTGGGGTGGGTTAACAGTGGTTACAATCAGACCGTGGAACGATGTTCCCAAGAATTaGGTGAGTGTAACTTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: MLKSHWGGLTVVTIRPWNDVPKN*VSVTSS Trigger: ACTAGAAGTTACACTCACTCAATTCTTGGGAACATC...GTTCCACGGTCTGATTGTAACCACTGTTAACCCACCCCAGTGGCTTTTCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAATTGAATTCCTCCTAATTGTTTCTCTGGTTTTTCCTGATGCTTCCTCCCCTGTCGCCACTGGTGTCTaGAGGGGTCTTGGCTATAGA | + |
|
Preference number: 2 (lower is better) Translates to: IIEFLLIVSLVFPDASSPVATGV*RGLGYR Trigger: TCTATAGCCAAGACCCCTGCAGACACCAGTGGCGAC...AGGGGAGGAAGCATCAGGAAAAACCAGAGAAACAATTAGGAGGAATTCAATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | AGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACTATCTGTGCCTAACTTaGAGAGTCCTCTACGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RSHLHLQKQMENVLRLPHYLCLT*RVLYGS Trigger: ACTTCCGTAGAGGACTCTCCAAGTTAGGCACAGATA...GTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAATTTAAGGCTAGTGTGGTCTACACAGGAGCTCCAGGCTAGCCACAGTTATTACAGTCTGTTTCTTTaGGGGAAGCCATGTATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TNLRLVWSTQELQASHSYYSLFL*GKPCIQ Trigger: CTGAATACATGGCTTCCCTCAAAGAAACAGACTGTA...ATAACTGTGGCTAGCCTGGAGCTCCTGTGTAGACCACACTAGCCTTAAATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTGACAATGTCATGTCACATCTGCTAAAGCAACAAAATGCATACTGGGAAAAGGTCACATACACTGAATaGCACGCAGCAGAAGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: VDNVMSHLLKQQNAYWEKVTYTE*HAAEGT Trigger: GGTGCCTTCTGCTGCGTGGCATTCAGTGTATGTGAC...CTTTTCCCAGTATGCATTTTGTTGCTTTAGCAGATGTGACATGACATTGTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCGTCACATACACTGAATaGCACGCAGCAGAAGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: LSKSVVQFLSVNFVVDNVVTYTE*HAAEGT Trigger: GGTGCCTTCTGCTGCGTGGCATTCAGTGTATGTGAC...GACATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR CAA 90 bp | AGTTGCAACATGCTTTTAGTAGGGCAGAGGAGTATTTATTTCTTCTaGGCACCTAAGGGACACCAAAGGGAGAGTGACAATATGGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SCNMLLVGQRSIYFF*APKGHQRESDNMAH Trigger: ATGAGCCATATTGTCACTCTCCCTTTGGTGTCCCTTAGGTGCCAAGAAGAAATAAATACTCCTCTGCCCTACTAAAAGCATGTTGCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCTTTTTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACGCTTCCAGCTGTCCATaGCCTCACAAAGCCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FFLSKSVVQFLSVNFVVDASSCP*PHKARE Trigger: TTCTCTGGCTTTGTGAGGTCATGGACAGCTGGAAGC...GTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTCTGGTCAGTGTGGGAAGGCAAGCAAGAGAAAAATCGGGAAATATTATCATTATTCAACAAGGGTCTaGACTCTGCTGTGTGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RSGQCGKASKRKIGKYYHYSTRV*TLLCGL Trigger: CAAACCACACAGCAGAGTTCAGACCCTTGTTGAATA...ATGATAATATTTCCCGATTTTTCTCTTGCTTGCCTTCCCACACTGACCAGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGTCTGGTCAGTGTGGGAAGGCAAGCAAGAGAAAAATCGGGAAATATTATCATTTCCATGTGGATGGCTaGAGAATGCAAGCTAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RSGQCGKASKRKIGKYYHFHVDG*RMQAKQ Trigger: TTGCTTAGCTTGCATTCTGCAGCCATCCACATGGAA...ATGATAATATTTCCCGATTTTTCTCTTGCTTGCCTTCCCACACTGACCAGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACACAATGAAATGGACTTGTGTGCAGACACACTCTTTTACGCAGATAAAAATGAGACACTGAAGTCATaGATGGCACAGTCCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: GHNEMDLCADTLFYADKNETLKS*MAQSTV Trigger: GACTGTGGACTGTGCCATGCATGACTTCAGTGTCTC...ATTTTTATCTGCGTAAAAGAGTGTGTCTGCACACAAGTCCATTTCATTGTGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTATTTACAGAAGCAAATaGAGAATGTCCTACGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: QKQMENVLRLPHLSHTLAIYRSK*RMSYVY Trigger: GTAGACGTAGGACATTCTCCATTTGCTTCTGTAAAT...AGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTAAAATCAGATAGGGATGCTGAAGAGTCACGTGGGTTAACAGTGCTACAAAGTGATACAATTGGATaGGATGCTGAAAAGCCACGG | + |
|
Preference number: 2 (lower is better) Translates to: LLKSDRDAEESRGLTVLQSDTIG*DAEKPR Trigger: CCGTGGCTTTTCAGCATCCCATCCAATTGTATCACT...TTGTAGCACTGTTAACCCACGTGACTCTTCAGCATCCCTATCTGATTTTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAATTGAATTCCTCCTAATTGTTTCTCTGGTTTTTCCTGATGCTTCCTCCCCTTCTATGTTCTCTTGGTaGACCAGTAGCAGCTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: IIEFLLIVSLVFPDASSPSMFSW*TSSSCY Trigger: GTAGCAGCTGCTACTGGTGCACCAAGAGAACATAGA...AGGGGAGGAAGCATCAGGAAAAACCAGAGAAACAATTAGGAGGAATTCAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | GGACACAATGAAATGGACTTGTGTGCAGACACACTCTTTTACGCAGATAAAAATCTTCCAGGCCATTCCTaGGCCATGACTGTTCTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: GHNEMDLCADTLFYADKNLPGHS*AMTVLK Trigger: TTTAAGAACAGTCATGGCCCAGGAATGGCCTGGAAG...ATTTTTATCTGCGTAAAAGAGTGTGTCTGCACACAAGTCCATTTCATTGTGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAAAAAGAATCAGTGACTGGCTGGACACAATGAAATGGACTTGTGTGCAGACAGTTATTAGAAGGGTGTaGATGAGACCAGGAGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: IKRISDWLDTMKWTCVQTVIRRV*MRPGDF Trigger: GAAATCTCCTGGTCTCATGCACACCCTTCTAATAAC...TGTCTGCACACAAGTCCATTTCATTGTGTCCAGCCAGTCACTGATTCTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCATGTCACATCTGCTACAACAAAATGCATACTaGGAAAAGATGCTCCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VQFLSVNFVVDNVMSHLLQQNAY*EKMLPP Trigger: TGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTG...TAGCAGATGTGACATGACATTGTCAACCACAAAGTTCACACTCAAAAACTGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCCAACAAAATGCATACTaGGAAAAGATGCTCCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSKSVVQFLSVNFVVDNVQQNAY*EKMLPP Trigger: TGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTG...GACATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAATTGAATTCCTCCTAATTGTTTCTCTGGTTTTTCCTGATGCTTCCTCCCCTAAGAGGAAGAATTTCTaGTCCCATGTGGATACATCT | + |
|
Preference number: 2 (lower is better) Translates to: IIEFLLIVSLVFPDASSPKRKNF*SHVDTS Trigger: AGATGTATCCACATGGGATCAGAAATTCTTCCTCTT...AGGGGAGGAAGCATCAGGAAAAACCAGAGAAACAATTAGGAGGAATTCAATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTGACAATGTCATGTCACATCTGCTAAAGCAACAAAATGCATACTGGGAAAAGATTTACAGAAGCAAATaGAGAATGTCCTACGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: VDNVMSHLLKQQNAYWEKIYRSK*RMSYVY Trigger: GTAGACGTAGGACATTCTCCATTTGCTTCTGTAAAT...CTTTTCCCAGTATGCATTTTGTTGCTTTAGCAGATGTGACATGACATTGTCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTGACAATGTCATGTCACATCTGCTAAAGCAACAAAATGCATACTGGGAAAAGAAGGATAATGGTACTTaGATTAGAAAATACTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: VDNVMSHLLKQQNAYWEKKDNGT*IRKYSP Trigger: GGGGGAGTATTTTCTAATCCAAGTACCATTATCCTT...CTTTTCCCAGTATGCATTTTGTTGCTTTAGCAGATGTGACATGACATTGTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR GCA 72 bp | GCAAGCCTGGACTCCGCTGTGGTCCACGTGGGCCTCTaGAGGGGTCCCTGTGACTCAGAGGCCACTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ASLDSAVVHVGL*RGPCDSEATPQ Trigger: CTGTGGAGTGGCCTCTGAGTCACAGGGACCCCTGCAGAGGCCCACGTGGACCACAGCGGAGTCCAGGCTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | AGCGGATCAAGGTCCAGGAGACCCAAGAGCCCACGCTaGTGGCCACAGCTGGGTTACTCTGGGCTACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGSRSRRPKSPR*WPQLGYSGLLC Trigger: GCAGAGTAGCCCAGAGTAACCCAGCTGTGGCCAGCAGCGTGGGCTCTTGGGTCTCCTGGACCTTGATCCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GAAGGAAGGTCCCACAGGCAATGTCCTCCAGGATCGTaGCTGGGGTCCCTGCAGGAGGGCCTCAGAGTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EGRSHRQCPPGS*LGSLQEGLRVV Trigger: GACTACTCTGAGGCCCTCCTGCAGGGACCCCAGCCACGATCCTGGAGGACATTGCCTGTGGGACCTTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | CCAGGAGACCCAAGAGCCCACGCTGCTGGCCACAGCTaGGTTACTCTGGGCTACTCTGCCTCCACTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PGDPRAHAAGHS*VTLGYSASTSC Trigger: ACAGGAAGTGGAGGCAGAGTAGCCCAGAGTAACCCAGCTGTGGCCAGCAGCGTGGGCTCTTGGGTCTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GGATCAAGGTCCAGGAGACCCAAGAGCCCACGCTGCTaGCCACAGCTGGGTTACTCTGGGCTACTCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSRSRRPKSPRC*PQLGYSGLLCL Trigger: GAGGCAGAGTAGCCCAGAGTAACCCAGCTGTGGCCAGCAGCGTGGGCTCTTGGGTCTCCTGGACCTTGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CTGCTAGTCTCAGAGATGCCAAGGCCAGAGCTCATCTaGCTCCAGGCTCTGCAGGCAGCACTCTGTGGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: LLVSEMPRPELI*LQALQAALCGR Trigger: ACGGCCACAGAGTGCTGCCTGCAGAGCCTGGAGTCAGATGAGCTCTGGCCTTGGCATCTCTGAGACTAGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | AGATGCCAAGGCCAGAGCTCATCTGACTCCAGGCTCTaGAGGCAGCACTCTGTGGCCGTAATTGCTGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RCQGQSSSDSRL*RQHSVAVIAGG Trigger: TCCCCCAGCAATTACGGCCACAGAGTGCTGCCTGCAGAGCCTGGAGTCAGATGAGCTCTGGCCTTGGCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | GCCCCCATGATGATGACAGAGCTAGAGGGAGCACGGTaGTCACAGACACGGCGCTCACAGAGCGGAGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: APMMMTELEGAR*SQTRRSQSGGI Trigger: TATACCTCCGCTCTGTGAGCGCCGTGTCTGTGAGCACCGTGCTCCCTCTAGCTCTGTCATCATCATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GCTCCTCCCAGACCGCCCAGTTTCCAAGCACGCACCTaGCTGCACGTGAGGTCTAAGTTGGGTCTCATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: APPRPPSFQART*LHVRSKLGLIH Trigger: GTGAATGAGACCCAACTTAGACCTCACGTGCAGCCAGGTGCGTGCTTGGAAACTGGGCGGTCTGGGAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | GACCGCCCAGTTTCCAAGCACGCACCTGGCTGCACGTaGGGTCTAAGTTGGGTCTCATTCACAGTCGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: DRPVSKHAPGCT*GLSWVSFTVAT Trigger: AGTGGCGACTGTGAATGAGACCCAACTTAGACCTCACGTGCAGCCAGGTGCGTGCTTGGAAACTGGGCGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | GACCTGGGAGGAGCATCTCTGTCTCTAAGGCTAAGCTaGCACCTGAGGGGCTCTCATCCTCATGGCGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DLGGASLSLRLS*HLRGSHPHGVK Trigger: CTTCACGCCATGAGGATGAGAGCCCCTCAGGTGGCAGCTTAGCCTTAGAGACAGAGATGCTCCTCCCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GAGCCATGTGTCCAGGCTGTTGGTAGGCAAAGGGGCTaGGGTGGCCTAAGAAGAATTCCCCTTAGCCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: EPCVQAVGRQRG*GGLRRIPLSPC Trigger: GCATGGGCTAAGGGGAATTCTTCTTAGGCCACCCCAGCCCCTTTGCCTACCAACAGCCTGGACACATGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GGACAGCCAGGCATGCATGCAAACTGCTCTAGGCACTaGATGAGTCTGCACCTCCCCAACTGTGGCTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GQPGMHANCSRH*MSLHLPNCGSS Trigger: AGACGAGCCACAGTTGGGGAGGTGCAGACTCATCCAGTGCCTAGAGCAGTTTGCATGCATGCCTGGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGAGCAGCGGATCAAGGTCCAGGAGACCCAAGAGCCCACGCTGCTGGCCACCAGTTTGGGGGCTGCTaGAATCCAAGAGTACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RRAADQGPGDPRAHAAGHQFGGC*NPRVQK Trigger: TTTTTGTACTCTTGGATTCAAGCAGCCCCCAAACTG...GTGGCCAGCAGCGTGGGCTCTTGGGTCTCCTGGACCTTGATCCGCTGCTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CAGTGCCAGAGGCTACAGACAGGGCTAGCCTACTGTTaGCCTTCCAGGCCATTCCTGGGCCATGACTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QCQRLQTGLAYC*PSRPFLGHDCS Trigger: AGAACAGTCATGGCCCAGGAATGGCCTGGAAGGTCAACAGTAGGCTAGCCCTGTCTGTAGCCTCTGGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | AGCCAGGCATGCATGCAAACTGCTCTAGGCACTGGATaGGTCTGCACCTCCCCAACTGTGGCTCGTCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SQACMQTALGTG*VCTSPTVARLF Trigger: GAACAGACGAGCCACAGTTGGGGAGGTGCAGACTCATCCAGTGCCTAGAGCAGTTTGCATGCATGCCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | AGTTCCCTCTGTGGACAGCCAGGCATGCATGCAAACTaGTCTAGGCACTGGATGAGTCTGCACCTCCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSLCGQPGMHAN*SRHWMSLHLPN Trigger: GTTGGGGAGGTGCAGACTCATCCAGTGCCTAGAGCAGTTTGCATGCATGCCTGGCTGTCCACAGAGGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GGTATCCAGAAAGTCTCCAACTCCAGGCCCTCTGCCTaGAAGAGAAGGAAGGTCCCACAGGCAATGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GIQKVSNSRPSA*KRRKVPQAMSS Trigger: GGAGGACATTGCCTGTGGGACCTTCCTTCTCTTCCAGGCAGAGGGCCTGGAGTTGGAGACTTTCTGGATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | ATGCTGCTTAAGGCTATGTCTGTGGAGCAAGCAGGCTaGAGAGCAGCTAGTTCCCTCTGTGGACAGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: MLLKAMSVEQAG*RAASSLCGQPG Trigger: GCCTGGCTGTCCACAGAGGGAACTAGCTGCTCTCCAGCCTGCTTGCTCCACAGACATAGCCTTAAGCAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | CTTGCTCCGCCCCGCCCTAGTTATCTGTGCCTAACTTaGAGAGTCCTCTACGGAAGTCATGGAGGTCGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: LAPPRPSYLCLT*RVLYGSHGGRR Trigger: TCGACGACCTCCATGACTTCCGTAGAGGACTCTCCAAGTTAGGCACAGATAACTAGGGCGGGGCGGAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR GCA 72 bp | TCCTGGTATCCAGAAAGTCTCCAACTCCAGGCCCTCTaGCTGGAAGAGAAGGAAGGTCCCACAGGCAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SWYPESLQLQAL*LEEKEGPTGNV Trigger: GACATTGCCTGTGGGACCTTCCTTCTCTTCCAGGCAGAGGGCCTGGAGTTGGAGACTTTCTGGATACCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTaGAGAGTCACATACACTGAATGCCACGCAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DAPSTCPWSRTC*RVTYTECHAAE Trigger: TTCTGCTGCGTGGCATTCAGTGTATGTGACTCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR CCA 72 bp | GTGACTCATCAGCCACTGCAAGGAAAGATGAGGACTTaGAAGTCGCCACAGGGCCTGGGTCTTAAACGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VTHQPLQGKMRT*KSPQGLGLKRA Trigger: GGCACGTTTAAGACCCAGGCCCTGTGGCGACTTCCAAGTCCTCATCTTTCCTTGCAGTGGCTGATGAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | CTGCACCTGCCATCATGCTGCTTAAGGCTATGTCTGTaGAGCAAGCAGGCTGGAGAGCAGCTAGTTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHLPSCCLRLCL*SKQAGEQLVPS Trigger: AGAGGGAACTAGCTGCTCTCCAGCCTGCTTGCTCCACAGACATAGCCTTAAGCAGCATGATGGCAGGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGCTAGAGGGAGCACGGTGCTCACAGACACGGCGCTCACAGAGCGGAGGTACCAAAGTCACCTTCTaGCCAGGCTTGTTTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TELEGARCSQTRRSQSGGTKVTF*PGLFLK Trigger: CTTTAAAAACAAGCCTGGCAAGAAGGTGACTTTGGT...ACCTCCGCTCTGTGAGCGCCGTGTCTGTGAGCACCGTGCTCCCTCTAGCTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CTCCTTCTACCTGATAATGGAAGCTCATCTGAAGCCTaGGCTGACAGCCCCAGTGTCCACTGCTCTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLLPDNGSSSEA*ADSPSVHCSWE Trigger: CTCCCAAGAGCAGTGGACACTGGGGCTGTCAGCTCAGGCTTCAGATGAGCTTCCATTATCAGGTAGAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CTGGGGGAAAACAGCTCACACCATCTGTATGGGATTTaGGGCCACGACAACAGTCCTAAGACTGGGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGENSSHHLYGI*GHDNSPKTGLD Trigger: GTCCAGCCCAGTCTTAGGACTGTTGTCGTGGCCTCAAATCCCATACAGATGGTGTGAGCTGTTTTCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | AAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTaGTGGAGAGTCACATACACTGAATGCCACGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KDAPSTCPWSRT*WRVTYTECHAA Trigger: TGCTGCGTGGCATTCAGTGTATGTGACTCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR GCA 72 bp | GGCTGGGGTGGCCTAAGAAGAATTCCCCTTAGCCCATaGTGGGCCATAGCTAACCCAGTCTATGTTCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GWGGLRRIPLSP*WAIANPVYVLL Trigger: CAAGAGAACATAGACTGGGTTAGCTATGGCCCAGCATGGGCTAAGGGGAATTCTTCTTAGGCCACCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | AGGCACCACCCTACCCCAGCTCATGTCAGAAATGCATaGGGATCACGGCTAAAGGGCTCTGAGGTTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RHHPTPAHVRNA*GSRLKGSEVFL Trigger: CAAGAAAACCTCAGAGCCCTTTAGCCGTGATCCGCATGCATTTCTGACATGAGCTGGGGTAGGGTGGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | TCACACACACTTGCTCCGCCCCGCCCTAGTTATCTGTaGCTAACTTGGAGAGTCCTCTACGGAAGTCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SHTLAPPRPSYL*LTWRVLYGSHG Trigger: TCCATGACTTCCGTAGAGGACTCTCCAAGTTAGGCACAGATAACTAGGGCGGGGCGGAGCAAGTGTGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| 3UTR CCA 72 bp | TGGCACCTAAGGGACACCAAAGGGAGAGTGACAATATaGCTCATAGGAGAGCAGCGGATCAAGGTCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WHLRDTKGRVTI*LIGEQRIKVQE Trigger: CTCCTGGACCTTGATCCGCTGCTCTCCTATGAGCCATATTGTCACTCTCCCTTTGGTGTCCCTTAGGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGCTCTGCAGGCAGCACTCTGTGGCCGTAATTGCTGGGGGAAAACAGCTCGAGCCAAGTCTAGGTTaGAGAACAGCAAACTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: SRLCRQHSVAVIAGGKQLEPSLG*RTANCI Trigger: AATGCAGTTTGCTGTTCTCAAACCTAGACTTGGCTC...GAGCTGTTTTCCCCCAGCAATTACGGCCACAGAGTGCTGCCTGCAGAGCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | TGTAGCCCAGGCTGGCTCTTAAACTTTCTATGCAGCTaGTCGTCCTGCCTCCACATCCCAGCTACTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: CSPGWLLNFLCS*SSCLHIPATGI Trigger: AATCCCAGTAGCTGGGATGTGGAGGCAGGACGATCAGCTGCATAGAAAGTTTAAGAGCCAGCCTGGGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | CTAAGTTGGGTCTCATTCACAGTCGCCACTGGTGTCTaGAGGGGTCTTGGCTATAGAAAGAGCCCCTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSWVSFTVATGV*RGLGYRKSPCQ Trigger: TTGACAGGGGCTCTTTCTATAGCCAAGACCCCTGCAGACACCAGTGGCGACTGTGAATGAGACCCAACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | GGGGTCCCTGTGACTCAGAGGCCACTCCACAGCAAGTaGTACACTGTCAAAGAGAACTGTACAAGTTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GVPVTQRPLHSK*YTVKENCTSSH Trigger: GTGTGAACTTGTACAGTTCTCTTTGACAGTGTAGCACTTGCTGTGGAGTGGCCTCTGAGTCACAGGGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GAGAACTATTGGGAGCTGTGGGGAACGGCAGCACCCTaGCTGAATTACATCAGAGGTGACCACTCTGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ENYWELWGTAAP*LNYIRGDHSVV Trigger: TACAACAGAGTGGTCACCTCTGATGTAATTCAGCCAGGGTGCTGCCGTTCCCCACAGCTCCCAATAGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTTCTTGGCACCTAAGGGACACCAAAGGGAGAGTGACAATATGGCTCATACATGTGTCCAGGCTGTaGGTAGGCAAAGGGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ISSWHLRDTKGRVTIWLIHVSRL*VGKGAG Trigger: CCCAGCCCCTTTGCCTACCAACAGCCTGGACACATG...TATGAGCCATATTGTCACTCTCCCTTTGGTGTCCCTTAGGTGCCAAGAAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | AATGAGACCACTAAAGACCTTATAAGAAAGCAGGCCTaGAGCCAGGCTGTGGCTCACACCTTGGATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NETTKDLIRKQA*SQAVAHTLDPS Trigger: GCTGGGATCCAAGGTGTGAGCCACAGCCTGGCTTCAGGCCTGCTTTCTTATAAGGTCTTTAGTGGTCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | AGCCTGTCTTCTAAGCCCAGGCTAGCTCCTATACAATaGTCTCCTGGTATCCAGAAAGTCTCCAACTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSSKPRLAPIQ*SPGIQKVSNSR Trigger: CCTGGAGTTGGAGACTTTCTGGATACCAGGAGAGCATTGTATAGGAGCTAGCCTGGGCTTAGAAGACAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | AGAGCTGGCTCAGTGGTTAAGAGCATTAGCTACACTTaGAGAGGGCCTGGGTTTGACTTCCAGCATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RAGSVVKSISYT*RGPGFDFQHAH Trigger: ATGTGCATGCTGGAAGTCAAACCCAGGCCCTCTGCAAGTGTAGCTAATGCTCTTAACCACTGAGCCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | ACCAACGTTTCCCTTGCTCAAGGCATTCTGAAGTGTTaGGGGTCAGGGTTAACAAACCTTGCCTCCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TNVSLAQGILKC*GSGLTNLASCV Trigger: CACACAGGAGGCAAGGTTTGTTAACCCTGACCCCCAACACTTCAGAATGCCTTGAGCAAGGGAAACGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GCAAGAGCTACCCTGTCTCTGTGCAAGAAGTCAGCATaGCCTGTAACATGGAAAGCTGGAGAAATGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ARATLSLCKKSA*PVTWKAGEMPR Trigger: CCTTGGCATTTCTCCAGCTTTCCATGTTACAGGCCATGCTGACTTCTTGCACAGAGACAGGGTAGCTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | TGGCCTCTTTTAGGTTCCATGTGGATGGCTGCAGAATaGAAGCTAAGCAAGGTGCAGACTGCTAGTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WPLLGSMWMAAE*KLSKVQTASLR Trigger: TCTGAGACTAGCAGTCTGCACCTTGCTTAGCTTGCATTCTGCAGCCATCCACATGGAACCTAAAAGAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | TCATATCAAATGCAGTACCTGCACCTGCCATCATGCTaGTTAAGGCTATGTCTGTGGAGCAAGCAGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SYQMQYLHLPSC*LRLCLWSKQAG Trigger: TCCAGCCTGCTTGCTCCACAGACATAGCCTTAAGCAGCATGATGGCAGGTGCAGGTACTGCATTTGATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | AAGGCTAAGCTGCCACCTGAGGGGCTCTCATCCTCATaGCGTGAAGGATGGCTTTGTATTGTTCAAACCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KAKLPPEGLSSS*REGWLCIVQTY Trigger: ATAGGTTTGAACAATACAAAGCCATCCTTCACGCCATGAGGATGAGAGCCCCTCAGGTGGCAGCTTAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | ACTTCCAGTTCAGTAGCCTTAGCAAGTGTCCTCATATaGTCATGTCACCAGATCATACTCCAGCCAGCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSSSVALASVLI*SCHQIILQPAE Trigger: CTCGGCTGGCTGGAGTATGATCTGGTGACATGACCATATGAGGACACTTGCTAAGGCTACTGAACTGGAAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GCTCTGAGGTTTTCTTGGCCTCTTTTAGGTTCCATGTaGATGGCTGCAGAATGCAAGCTAAGCAAGGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALRFSWPLLGSM*MAAECKLSKVQ Trigger: CTGCACCTTGCTTAGCTTGCATTCTGCAGCCATCCACATGGAACCTAAAAGAGGCCAAGAAAACCTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | GGGAACGGCAGCACCCTGGCTGAATTACATCAGAGGTaGCCACTCTGTTGTATAAAGCATCCCAAATTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GNGSTLAELHQR*PLCCIKHPKLM Trigger: CATCAATTTGGGATGCTTTATACAACAGAGTGGTCACCTCTGATGTAATTCAGCCAGGGTGCTGCCGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CAAACGGGCTTGCTTGTGATGCTTTTGGGCTGCATGTaGGCTCTCTCACACTCATATCAAATGCAGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: QTGLLVMLLGCM*ALSHSYQMQYL Trigger: CAGGTACTGCATTTGATATGAGTGTGAGAGAGCTCACATGCAGCCCAAAAGCATCACAAGCAAGCCCGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | TTTAAGAAGTTCTCTGTGAGCAGAGAGCTTTTTGGCTaGAGGCCCTTCCTTAGCAGGAACTGGGAAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FKKFSVSRELFG*RPFLSRNWERE Trigger: TTCCCTTTCCCAGTTCCTGCTAAGGAAGGGCCTGCAGCCAAAAAGCTCTCTGCTCACAGAGAACTTCTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | CATTCTGAAGTGTTGGGGGTCAGGGTTAACAAACCTTaGCTCCTGTGTGCAAACTCTCCTAAAGAGGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: HSEVLGVRVNKP*LLCANSPKEEC Trigger: GCATTCCTCTTTAGGAGAGTTTGCACACAGGAGGCAAGGTTTGTTAACCCTGACCCCCAACACTTCAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | ATGTCTTTAGAGGAAGCAGATGAAAGGGAGGTTCCGTaGTTGCTTGGGGCTTTAGCTGTGGAGCCTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: MSLEEADEREVP*LLGALAVEPKS Trigger: TGATTTAGGCTCCACAGCTAAAGCCCCAAGCAAGCACGGAACCTCCCTTTCATCTGCTTCCTCTAAAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | TTAAGGTCTAAAGTGACAGCTCTTGGGGAGAAGCAATaGAAGGAGATGATCAGAGGTCAAGCACGGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LRSKVTALGEKQ*KEMIRGQARAV Trigger: AACAGCCCGTGCTTGACCTCTGATCATCTCCTTCCATTGCTTCTCCCCAAGAGCTGTCACTTTAGACCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | CAGTTCTGCCGTGTCCCTGTCGGCTATTCCTTGCTGTaGACACACACTCCAATTAATATAGTTGCAACATGC | + |
|
Preference number: 3 (lower is better) Translates to: QFCRVPVGYSLL*THTPINIVATC Trigger: GCATGTTGCAACTATATTAATTGGAGTGTGTGTCCACAGCAAGGAATAGCCGACAGGGACACGGCAGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | ACAGTGTTACAATTGGATGGGATGCTGAAAAGCCACTaGGGTGGGTTAACAGTGGTTACAATCAGACCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVLQLDGMLKSH*GGLTVVTIRPW Trigger: CCACGGTCTGATTGTAACCACTGTTAACCCACCCCAGTGGCTTTTCAGCATCCCATCCAATTGTAACACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CCTGAAAGTCCAATGGTTCCTTTAAGAAGTTCTCTGTaGGCAGAGAGCTTTTTGGCTGCAGGCCCTTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PESPMVPLRSSL*AESFLAAGPSL Trigger: TAAGGAAGGGCCTGCAGCCAAAAAGCTCTCTGCTCACAGAGAACTTCTTAAAGGAACCATTGGACTTTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GTCATGTCACATCTGCTAAAGCAACAAAATGCATACTaGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VMSHLLKQQNAY*EKMLPPHARGL Trigger: TAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTGCTTTAGCAGATGTGACATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR CCA 72 bp | GTTACAATTGGATGGGATGCTGAAAAGCCACTGGGGTaGGTTAACAGTGGTTACAATCAGACCGTGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: VTIGWDAEKPLG*VNSGYNQTVEQ Trigger: TTGTTCCACGGTCTGATTGTAACCACTGTTAACCCACCCCAGTGGCTTTTCAGCATCCCATCCAATTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | AGTCATTCCCTGTCAGTACGCACACCCCAAAACTTCTaGTTTATCTTCCCTCTAGAGAGGTCTCCACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSLSVRTPQNF*FIFPLERSPLN Trigger: ATTTAGTGGAGACCTCTCTAGAGGGAAGATAAACCAGAAGTTTTGGGGTGTGCGTACTGACAGGGAATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | GAATCATTCAAAGGAAACAGACTTTACTGTGTATGGTaGACAGTTCTGCCGTGTCCCTGTCGGCTATTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ESFKGNRLYCVW*TVLPCPCRLFL Trigger: AAGGAATAGCCGACAGGGACACGGCAGAACTGTCCACCATACACAGTAAAGTCTGTTTCCTTTGAATGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | CTGTCTCTGTGCAAGAAGTCAGCATGGCCTGTAACATaGAAAGCTGGAGAAATGCCAAGGGAAAAACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLCKKSAWPVT*KAGEMPREKQQ Trigger: TTGTTGTTTTTCCCTTGGCATTTCTCCAGCTTTCCATGTTACAGGCCATGCTGACTTCTTGCACAGAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | TGTGCAAACTCTCCTAAAGAGGAATGCCTGTGGACCTaGAAGTCCAATGGTTCCTTTAAGAAGTTCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CANSPKEECLWT*KSNGSFKKFSV Trigger: CACAGAGAACTTCTTAAAGGAACCATTGGACTTTCAGGTCCACAGGCATTCCTCTTTAGGAGAGTTTGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | AAAATGAAGAATCATGATGTCTTTAGAGGAAGCAGATaGAAGGGAGGTTCCGTGCTTGCTTGGGGCTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KMKNHDVFRGSR*KGGSVLAWGFS Trigger: GCTAAAGCCCCAAGCAAGCACGGAACCTCCCTTTCATCTGCTTCCTCTAAAGACATCATGATTCTTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | CGTCCTAGTGTCTTAGGATCATGGGTTGTGACAGTTTaGGGGCTGCTTGAATCCAAGAGTACAAAAACTATT | + |
|
Preference number: 3 (lower is better) Translates to: RPSVLGSWVVTV*GLLESKSTKTI Trigger: AATAGTTTTTGTACTCTTGGATTCAAGCAGCCCCCAAACTGTCACAACCCATGATCCTAAGACACTAGGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CCTCAGGCTGTTTTCTCATTCAAGAGGAAGAATTTCTaGTCCCATGTGGATACATCTAGAGGGTTCTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PQAVFSFKRKNF*SHVDTSRGFSD Trigger: ATCTGAGAACCCTCTAGATGTATCCACATGGGATCAGAAATTCTTCCTCTTGAATGAGAAAACAGCCTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR GCA 72 bp | ATAATTCCAGTTCTTAGAAGGCTGAGACAGGAGGATTaGCACAAATTTAAGGCTAGTGTGGTCTACACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IIPVLRRLRQED*HKFKASVVYTG Trigger: TCCTGTGTAGACCACACTAGCCTTAAATTTGTGGCAATCCTCCTGTCTCAGCCTTCTAAGAACTGGAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | ACAACTCTGTCACTGTTACAGAAGGTCTGGTCAGTGTaGGAAGGCAAGCAAGAGAAAAATCGGGAAATATTA | + |
|
Preference number: 3 (lower is better) Translates to: TTLSLLQKVWSV*EGKQEKNREIL Trigger: TAATATTTCCCGATTTTTCTCTTGCTTGCCTTCCCACACTGACCAGACCTTCTGTAACAGTGACAGAGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | GCAAGTGCTTCAAAATCCAGTGATGTTCCCAAGAATTaGGTGAGTGTAACTTCTAGTGACCCACTTCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ASASKSSDVPKN*VSVTSSDPLQL Trigger: TAACTGAAGTGGGTCACTAGAAGTTACACTCACTCAATTCTTGGGAACATCACTGGATTTTGAAGCACTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | TTTTCTCATTCAAGAGGAAGAATTTCTGATCCCATGTaGATACATCTAGAGGGTTCTCAGATGGGTAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FSHSRGRISDPM*IHLEGSQMGRE Trigger: TTCCCTACCCATCTGAGAACCCTCTAGATGTATCCACATGGGATCAGAAATTCTTCCTCTTGAATGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | AGTTCCAGAGATCTGATAACCTCTCTTCTGGTCTCTTaGTTATCAGGTACAAGTAGTACTTGTGTAGTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSRDLITSLLVS*LSGTSSTCVVV Trigger: GACTACTACACAAGTACTACTTGTACCTGATAATCAAGAGACCAGAAGAGAGGTTATCAGATCTCTGGAACT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CCA 72 bp | CCATGTTACTGTGTCCTGACTACAAGAGTAGAAAACTaGAAACAGCTTAACTATCCAAGGAATGTTACACAG | + |
|
Preference number: 3 (lower is better) Translates to: PCYCVLTTRVEN*KQLNYPRNVTQ Trigger: CTGTGTAACATTCCTTGGATAGTTAAGCTGTTTCCAGTTTTCTACTCTTGTAGTCAGGACACAGTAACATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAAAGAATCAGTGACTGGCTGGACACAATGAAATGGACTTGTGTGCAGACAGTTAGCATTAAGCTCTaGTGGAGATGTAAGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: IKRISDWLDTMKWTCVQTVSIKL*WRCKKH Trigger: ATGTTTCTTACATCTCCACAAGAGCTTAATGCTAAC...TGTCTGCACACAAGTCCATTTCATTGTGTCCAGCCAGTCACTGATTCTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | GTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTaGCAATGTCATGTCACATCTGCTAAAGCAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSCAVFECELCG*QCHVTSAKATK Trigger: TTTTGTTGCTTTAGCAGATGTGACATGACATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR CCA 72 bp | TTGCTTATCCAATCCATAGTTAGCATTAAGCTCTTGTaGAGATGTAAGAAACATCTTCCTGCTGTCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: LLIQSIVSIKLL*RCKKHLPAVTF Trigger: GAATGTGACAGCAGGAAGATGTTTCTTACATCTCCACAAGAGCTTAATGCTAACTATGGATTGGATAAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | AGCACAACAAAGATGATGTGTTATTCAACAAGGGTCTaGACTCTGCTGTGTGGTTTGATTAAAACACTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: STTKMMCYSTRV*TLLCGLIKTLS Trigger: ACTTAGTGTTTTAATCAAACCACACAGCAGAGTTCAGACCCTTGTTGAATAACACATCATCTTTGTTGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | TGTCAGCAAACTAGAGACACACACAAGAGTATGAATTaGATATACAAGCAAGAGTCACATGTGTACTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CQQTRDTHKSMN*IYKQESHVYFC Trigger: ACAGAAGTACACATGTGACTCTTGCTTGTATATTCAATTCATACTCTTGTGTGTGTCTCTAGTTTGCTGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | CATTCATTTCTGAGAATTATTTCAGCACAACAAAGATaGTGTGTTATTCAACAAGGGTCTGAACTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HSFLRIISAQQR*CVIQQGSELCC Trigger: ACAGCAGAGTTCAGACCCTTGTTGAATAACACATCATCTTTGTTGTGCTGAAATAATTCTCAGAAATGAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR TCA 72 bp | AAAATTGTCAGCAAACTAGAGACACACACAAGAGTATaGATTGAATATACAAGCAAGAGTCACATGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: KIVSKLETHTRV*IEYTSKSHMCT Trigger: AGTACACATGTGACTCTTGCTTGTATATTCAATTCATACTCTTGTGTGTGTCTCTAGTTTGCTGACAATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCGTGGTCTAGAACCTGCTGGAGAGTCACATACACTGAATGCCACGCAGCACTGGCCGCCGACTCCTaGAGTGCCGTGGTCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CPWSRTCWRVTYTECHAALAADS*SAVVSR Trigger: CCGGCTGACCACGGCACTGCAGGAGTCGGCGGCCAG...TGCTGCGTGGCATTCAGTGTATGTGACTCTCCAGCAGGTTCTAGACCACGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCGCGGCCCATCTCCTCTaGCTGCTCCAGTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MENVLRLPHLSHTLAPPRAAHLL*LLQSAR Trigger: CCTGGCCGACTGGAGCAGGCAGAGGAGATGGGCCGC...GCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGGAGAGTCACATACACTGTGGTCAGCCGGGCGTTaGTCTCCCGCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLPPHARGLEPAGESHTLWSAGR*SPAGSA Trigger: TGCAGACCCTGCGGGAGAGCAACGCCCGGCTGACCA...CAGTGTATGTGACTCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGGAGAGTCACAGAGGTGAGTGTCGGCTaGGCTCGCGTGAGAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKDAPSTCPWSRTCWRVTEVSVG*ARVRGL Trigger: AAGGCCTCTCACGCGAGCCCAGCCGACACTCACCTC...TGTGACTCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCTCTCTCTCCTGCCTGTaGGGTGAAGGCAGAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MENVLRLPHLSHTLAPPRSLSCL*GEGREG Trigger: CCCCTCTCTGCCTTCACCCCACAGGCAGGAGAGAGA...GCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCAGAAGTAGGAAACCGTaGCGGCCTGCTTGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MENVLRLPHLSHTLAPPRRSRKP*RPACLP Trigger: CGGCAAGCAAGCAGGCCGTCACGGTTTCCTACTTCT...GCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCTAGAGGGAGCACGGTGCTCACAGACACGGCGCTCACAGAGCGGAGGTCTCCTGGAACTTCTCTaGAAACTTCGTGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TELEGARCSQTRRSQSGGLLELL*KLRELQ Trigger: CTGCAGCTCACGAAGTTTGCAGAGAAGTTCCAGGAG...ACCTCCGCTCTGTGAGCGCCGTGTCTGTGAGCACCGTGCTCCCTCTAGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCCAGCTCCCCCTTCAGGTaGCGCTGTCGGTATTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: WRMSYVYHTSHTHLLRPASSPFR*RCRYLL Trigger: GAGTAAATACCGACAGCGCCACCTGAAGGGGGAGCT...GGCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACCTGGCCGCCGACTCCTaGAGTGCCGTGGTCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TCIYRSKWRMSYVYHTSHLAADS*SAVVSR Trigger: CCGGCTGACCACGGCACTGCAGGAGTCGGCGGCCAG...GTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTTCTCAGACTTGAGGTaGGTGTCGGCTGGGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCILGKDAPSTCPWSRTCFSDLR*VSAGLA Trigger: CGCGAGCCCAGCCGACACTCACCTCAAGTCTGAGAA...GCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | GATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTGGTCAGCCGGGCGTTaGTCTCCCGCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRTCIYRSKWRMSYVYHTWSAGR*SPAGSA Trigger: TGCAGACCCTGCGGGAGAGCAACGCCCGGCTGACCA...GGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | GATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCAACTGCCGCTTCCACTaGTCCACGCTGGCCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: DRTCIYRSKWRMSYVYHTNCRFH*STLAAD Trigger: GTCGGCGGCCAGCGTGGAGCAGTGGAAGCGGCAGTT...GGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGGAGACTGCAGATGGAGAACTaGCGCTTCCACTGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKDAPSTCPWSRTCWRLQMEN*RFHCST Trigger: CGTGGAGCAGTGGAAGCGGCAGTTCTCCATCTGCAG...TCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCCCCCTGTTTATCTCGCTaGACTGTTCTTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WRMSYVYHTSHTHLLRPAPCLSR*TVLPAP Trigger: AGGAGCTGGAAGAACAGTGCAGCGAGATAAACAGGG...GGCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGCAGCGGATCAAGGTCCAGGAGACCCAAGAGCCCACGCTGCTGGCCACATTCTTGGGAATGATTaGTGGAGGTCTCGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRAADQGPGDPRAHAAGHILGND*WRSRFS Trigger: AGAAAACCGAGACCTCCAGCAATCATTCCCAAGAAT...GTGGCCAGCAGCGTGGGCTCTTGGGTCTCCTGGACCTTGATCCGCTGCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CAA 72 bp | TCTCATTCACAGTCGCCACTGGTGTCTGCAGGGGTCTaGGCTATAGAAAGAGCCCCTGTCAAACGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSQSPLVSAGV*AIERAPVKRAC Trigger: GCAAGCCCGTTTGACAGGGGCTCTTTCTATAGCCAAGACCCCTGCAGACACCAGTGGCGACTGTGAATGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR TCA 90 bp | ATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGGAGATGTCATTCTCAGACTTaGGGTGAGTGTCGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGKDAPSTCPWSRTCWRCHSQT*GECRLG Trigger: GCCCAGCCGACACTCACCTCAAGTCTGAGAATGACA...TCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ACAAATTTAAGGCTAGTGTGGTCTACACAGGAGCTCCAGGCTAGCCACAGTTATTGGTCAGCCGGGCGTTaGTCTCCCGCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNLRLVWSTQELQASHSYWSAGR*SPAGSA Trigger: TGCAGACCCTGCGGGAGAGCAACGCCCGGCTGACCA...ATAACTGTGGCTAGCCTGGAGCTCCTGTGTAGACCACACTAGCCTTAAATTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR GCA 90 bp | CAGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACAAACTGCCGCTTCCACTaGTCCACGCTGGCCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QIAPAFTEANGECPTSTTNCRFH*STLAAD Trigger: GTCGGCGGCCAGCGTGGAGCAGTGGAAGCGGCAGTT...TGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAACAAAATGCATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTGAGGTGAGTGTCGGCTaGGCTCGCGTGAGAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KATKCILGKDAPSTCPWSEVSVG*ARVRGL Trigger: AAGGCCTCTCACGCGAGCCCAGCCGACACTCACCTC...AGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCGAGGTGAGTGTCGGCTaGGCTCGCGTGAGAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEANGECPTSTTPLTHTCEVSVG*ARVRGL Trigger: AAGGCCTCTCACGCGAGCCCAGCCGACACTCACCTC...GCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | AATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCCCACTTCTTCACATTaGCAGCACTCTGTGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NGECPTSTTPLTHTCSAPPTSSH*QHSVSA Trigger: CGCTGACACAGAGTGCTGCCAATGTGAAGAAGTGGG...CGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | AAATGCATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCCGCTGGATGCCTGAGTaGAAGACGGGGTTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: KCILGKDAPSTCPWSRTCRWMPE*KTGFHT Trigger: GGTGTGAAACCCCGTCTTCCACTCAGGCATCCAGCG...GCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| 3UTR CAA 72 bp | TGTTCTCTTGGTGCACCAGTAGCAGCTGCTACTGACTaGAGAACTATTGGGAGCTGTGGGGAACGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLGAPVAAATD*RTIGSCGERQH Trigger: GTGCTGCCGTTCCCCACAGCTCCCAATAGTTCTCAAGTCAGTAGCAGCTGCTACTGGTGCACCAAGAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR GCA 90 bp | TTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTAACTGCCGCTTCCACTaGTCCACGCTGGCCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQKQMENVLRLPHLSHTLNCRFH*STLAAD Trigger: GTCGGCGGCCAGCGTGGAGCAGTGGAAGCGGCAGTT...AAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCCTTGGGAATGATTGCTaGAGGTCTCGGTTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MENVLRLPHLSHTLAPPRLGNDC*RSRFSP Trigger: AGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAG...GCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | CAGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACAGAGGTGAGTGTCGGCTaGGCTCGCGTGAGAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIAPAFTEANGECPTSTTEVSVG*ARVRGL Trigger: AAGGCCTCTCACGCGAGCCCAGCCGACACTCACCTC...TGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR CAA 72 bp | GCATGCGGATCACGGCTAAAGGGCTCTGAGGTTTTCTaGGCCTCTTTTAGGTTCCATGTGGATGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACGSRLKGSEVF*ASFRFHVDGCR Trigger: TCTGCAGCCATCCACATGGAACCTAAAAGAGGCCAAGAAAACCTCAGAGCCCTTTAGCCGTGATCCGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR TCA 90 bp | AGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACTTCTCAGACTTGAGGTaGGTGTCGGCTGGGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSHLHLQKQMENVLRLPHFSDLR*VSAGLA Trigger: CGCGAGCCCAGCCGACACTCACCTCAAGTCTGAGAA...GTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | AATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGTTGTCTTCCAAGTTTTaGTTGTCTCTTTCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NGECPTSTTPLTHTCSAPLSSKF*LSLSAA Trigger: GGCGGCCGAAAGAGACAATCAAAACTTGGAAGACAA...CGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAACAAAATGCATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTGACGGCCTGCTTGCTTaGCGGCACCCAGTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KATKCILGKDAPSTCPWSDGLLA*RHPVLL Trigger: AAGAAGAACTGGGTGCCGGCAAGCAAGCAGGCCGTC...AGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCATGCTTGGGAATGATTaGTGGAGGTCTCGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MENVLRLPHLSHTLAPPRMLGND*WRSRFS Trigger: AGAAAACCGAGACCTCCAGCAATCATTCCCAAGCAT...GCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207371.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCTGCAGATGGAGAACTaGCGCTTCCACTGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: QKQMENVLRLPHLSHTLALQMEN*RFHCST Trigger: CGTGGAGCAGTGGAAGCGGCAGTTCTCCATCTGCAG...AGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | GATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCCTGCAGATGGAGAACTaGCGCTTCCACTGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DRTCIYRSKWRMSYVYHTLQMEN*RFHCST Trigger: CGTGGAGCAGTGGAAGCGGCAGTTCTCCATCTGCAG...GGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | AAATGCATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGTCATTCTCGTCCCTaGAGATGGAGAACTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCILGKDAPSTCPWSRTCCHSRP*RWRTAA Trigger: AGCGGCAGTTCTCCATCTGCAGGGACGAGAATGACA...GCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | AATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGATGCTTGGGAATGATTaGTGGAGGTCTCGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGECPTSTTPLTHTCSAPMLGND*WRSRFS Trigger: AGAAAACCGAGACCTCCAGCAATCATTCCCAAGCAT...CGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207371.2 |
||
| CDS-3UTR GCA 90 bp | GTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCATGTCACATCTGCTATGGTCAGCCGGGCGTTaGTCTCCCGCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQFLSVNFVVDNVMSHLLWSAGR*SPAGSA Trigger: TGCAGACCCTGCGGGAGAGCAACGCCCGGCTGACCA...TAGCAGATGTGACATGACATTGTCAACCACAAAGTTCACACTCAAAAACTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCTCCGCCCCGCATTCTTGGGAATGATTaGTGGAGGTCTCGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MENVLRLPHLSHTLAPPRILGND*WRSRFS Trigger: AGAAAACCGAGACCTCCAGCAATCATTCCCAAGAAT...GCGGGGCGGAGCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | AGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACTGTCATTCTCAGACTTaGGGTGAGTGTCGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLHLQKQMENVLRLPHCHSQT*GECRLG Trigger: GCCCAGCCGACACTCACCTCAAGTCTGAGAATGACA...GTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | ACAAATTTAAGGCTAGTGTGGTCTACACAGGAGCTCCAGGCTAGCCACAGTTATTGTCATTCTCAGACTTaGGGTGAGTGTCGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNLRLVWSTQELQASHSYCHSQT*GECRLG Trigger: GCCCAGCCGACACTCACCTCAAGTCTGAGAATGACA...ATAACTGTGGCTAGCCTGGAGCTCCTGTGTAGACCACACTAGCCTTAAATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR GCA 90 bp | TTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGACGGCCTGCTTGCTTaGCGGCACCCAGTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQKQMENVLRLPHLSHTLDGLLA*RHPVLL Trigger: AAGAAGAACTGGGTGCCGGCAAGCAAGCAGGCCGTC...AAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATCTGGCCGCCGACTCCTaGAGTGCCGTGGTCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSKSVVQFLSVNFVVDNLAADS*SAVVSR Trigger: CCGGCTGACCACGGCACTGCAGGAGTCGGCGGCCAG...ATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ATAATTGAATTCCTCCTAATTGTTTCTCTGGTTTTTCCTGATGCTTCCTCCCCTAACTGCCGCTTCCACTaGTCCACGCTGGCCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIEFLLIVSLVFPDASSPNCRFH*STLAAD Trigger: GTCGGCGGCCAGCGTGGAGCAGTGGAAGCGGCAGTT...AGGGGAGGAAGCATCAGGAAAAACCAGAGAAACAATTAGGAGGAATTCAATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCAACAAAATGCATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTCCCACTTCTTCACATTaGCAGCACTCTGTGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KATKCILGKDAPSTCPWSPTSSH*QHSVSA Trigger: CGCTGACACAGAGTGCTGCCAATGTGAAGAAGTGGG...AGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | GATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCCCCACTTCTTCACATTaGCAGCACTCTGTGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DRTCIYRSKWRMSYVYHTPTSSH*QHSVSA Trigger: CGCTGACACAGAGTGCTGCCAATGTGAAGAAGTGGG...GGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACAAGCTCCCCCTTCAGGTaGCGCTGTCGGTATTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: PAFTEANGECPTSTTPLTSSPFR*RCRYLL Trigger: GAGTAAATACCGACAGCGCCACCTGAAGGGGGAGCT...TGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTAGAACCTGCTGGAGATATCTGTGCCTAACTTaGAGAGTCCTCTACGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGKDAPSTCPWSRTCWRYLCLT*RVLYGS Trigger: ACTTCCGTAGAGGACTCTCCAAGTTAGGCACAGATA...TCTCCAGCAGGTTCTAGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | AGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACTGTCATTCTCGTCCCTaGAGATGGAGAACTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHLHLQKQMENVLRLPHCHSRP*RWRTAA Trigger: AGCGGCAGTTCTCCATCTGCAGGGACGAGAATGACA...GTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | CAGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACATGTCATTCTCGTCCCTaGAGATGGAGAACTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QIAPAFTEANGECPTSTTCHSRP*RWRTAA Trigger: AGCGGCAGTTCTCCATCTGCAGGGACGAGAATGACA...TGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | GATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCCCCTGTTTATCTCGCTaGACTGTTCTTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRTCIYRSKWRMSYVYHTPCLSR*TVLPAP Trigger: AGGAGCTGGAAGAACAGTGCAGCGAGATAAACAGGG...GGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCCCCTGTTTATCTCGCTaGACTGTTCTTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEANGECPTSTTPLTHTCPCLSR*TVLPAP Trigger: AGGAGCTGGAAGAACAGTGCAGCGAGATAAACAGGG...GCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | CAGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACATGTCTCTGGCTAGCCTaGCAGCTTCTCTTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIAPAFTEANGECPTSTTCLWLA*QLLLPP Trigger: AGGAGGTAAGAGAAGCTGCCAGGCTAGCCAGAGACA...TGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | AGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACTGTCTCTGGCTAGCCTaGCAGCTTCTCTTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHLHLQKQMENVLRLPHCLWLA*QLLLPP Trigger: AGGAGGTAAGAGAAGCTGCCAGGCTAGCCAGAGACA...GTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACATGTCTCTGGCTAGCCTaGCAGCTTCTCTTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAFTEANGECPTSTTPLTCLWLA*QLLLPP Trigger: AGGAGGTAAGAGAAGCTGCCAGGCTAGCCAGAGACA...TGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGGAGATGTAAGAAACATCTTCCTGCTGTCACATTCACTGTCACAATGGCGCTGGATGCCTGAGTaGAAGACGGGGTTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: SCGDVRNIFLLSHSLSQWRWMPE*KTGFHT Trigger: GGTGTGAAACCCCGTCTTCCACTCAGGCATCCAGCG...CCATTGTGACAGTGAATGTGACAGCAGGAAGATGTTTCTTACATCTCCACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CAA 72 bp | CTGGGTTACTCTGGGCTACTCTGCCTCCACTTCCTGTaGATAATCTCTGCCAAGTTCTCTCACCCAATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGYSGLLCLHFL*IISAKFSHPIK Trigger: CTTAATTGGGTGAGAGAACTTGGCAGAGATTATCAACAGGAAGTGGAGGCAGAGTAGCCCAGAGTAACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR TCA 90 bp | AAAGCAACAAAATGCATACTGGGAAAAGATGCTCCCTCCACATGCCCGTGGTCTCACTCGGACATGAGCTaGGGTATGATTTCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KATKCILGKDAPSTCPWSHSDMS*GMISLC Trigger: ACAGAGTGAAATCATACCTCAGCTCATGTCCGAGTG...AGACCACGGGCATGTGGAGGGAGCATCTTTTCCCAGTATGCATTTTGTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCCACTCGGACATGAGCTaGGGTATGATTTCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEANGECPTSTTPLTHTCHSDMS*GMISLC Trigger: ACAGAGTGAAATCATACCTCAGCTCATGTCCGAGTG...GCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | CAGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACTCCTGGAACTTCTCTaGAAACTTCGTGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIAPAFTEANGECPTSTTLLELL*KLRELQ Trigger: CTGCAGCTCACGAAGTTTGCAGAGAAGTTCCAGGAG...TGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | GTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCATGTCACATCTGCTATGTCATTCTCAGACTTaGGGTGAGTGTCGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQFLSVNFVVDNVMSHLLCHSQT*GECRLG Trigger: GCCCAGCCGACACTCACCTCAAGTCTGAGAATGACA...TAGCAGATGTGACATGACATTGTCAACCACAAAGTTCACACTCAAAAACTGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCCTGCAGATGGAGAACTaGCGCTTCCACTGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LSKSVVQFLSVNFVVDNVLQMEN*RFHCST Trigger: CGTGGAGCAGTGGAAGCGGCAGTTCTCCATCTGCAG...GACATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | TTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTAAAATGTCTCTCTCCTaGCTGTGGGGTGAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTEANGECPTSTTPLTHTKMSLS*LWGEGR Trigger: TCTGCCTTCACCCCACAGGCAGGAGAGAGACATTTT...AGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACTTGGGAATGATTGCTaGAGGTCTCGGTTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAFTEANGECPTSTTPLTLGNDC*RSRFSP Trigger: AGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAG...TGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR CAA 72 bp | GTCACACCCACTGTCCCCAGAATACAGTCTGTTTCTTaGAGGGAAGCCATGTATTCAGAAGTCACGGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTPTVPRIQSVS*REAMYSEVTVY Trigger: ATAGACCGTGACTTCTGAATACATGGCTTCCCTCAAAGAAACAGACTGTATTCTGGGGACAGTGGGTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGTGGTTGACAATGTCATGTCACATCTGCTAAAGCAACAAAATGCATACAGAAGTAGGAAACCGTaGCGGCCTGCTTGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NFVVDNVMSHLLKQQNAYRSRKP*RPACLP Trigger: CGGCAAGCAAGCAGGCCGTCACGGTTTCCTACTTCT...GTATGCATTTTGTTGCTTTAGCAGATGTGACATGACATTGTCAACCACAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATTTCTCAGACTTGAGGTaGGTGTCGGCTGGGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLSKSVVQFLSVNFVVDNFSDLR*VSAGLA Trigger: CGCGAGCCCAGCCGACACTCACCTCAAGTCTGAGAA...ATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGGAGATGTAAGAAACATCTTCCTGCTGTCACATTCACTGTCACAATGGTTGTCTTCCAAGTTTTaGTTGTCTCTTTCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCGDVRNIFLLSHSLSQWLSSKF*LSLSAA Trigger: GGCGGCCGAAAGAGACAATCAAAACTTGGAAGACAA...CCATTGTGACAGTGAATGTGACAGCAGGAAGATGTTTCTTACATCTCCACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCATGTCACATCTGCTACTCCTGGAACTTCTCTaGAAACTTCGTGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQFLSVNFVVDNVMSHLLLLELL*KLRELQ Trigger: CTGCAGCTCACGAAGTTTGCAGAGAAGTTCCAGGAG...TAGCAGATGTGACATGACATTGTCAACCACAAAGTTCACACTCAAAAACTGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAGCTCCCCCTTCAGGTaGCGCTGTCGGTATTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLSKSVVQFLSVNFVVDSSPFR*RCRYLL Trigger: GAGTAAATACCGACAGCGCCACCTGAAGGGGGAGCT...GTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR GCA 90 bp | GTTGACAATGTCATGTCACATCTGCTAAAGCAACAAAATGCATACTGGGAAAAGCCCTGTTTATCTCGCTaGACTGTTCTTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VDNVMSHLLKQQNAYWEKPCLSR*TVLPAP Trigger: AGGAGCTGGAAGAACAGTGCAGCGAGATAAACAGGG...CTTTTCCCAGTATGCATTTTGTTGCTTTAGCAGATGTGACATGACATTGTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACCCCACTTCTTCACATTaGCAGCACTCTGTGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSKSVVQFLSVNFVVDPTSSH*QHSVSA Trigger: CGCTGACACAGAGTGCTGCCAATGTGAAGAAGTGGG...GTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| 3UTR CAA 72 bp | ATGCTTTTAGTAGGGCAGAGGAGTATTTATTTCTTCTaGGCACCTAAGGGACACCAAAGGGAGAGTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: MLLVGQRSIYFF*APKGHQRESDN Trigger: ATTGTCACTCTCCCTTTGGTGTCCCTTAGGTGCCAAGAAGAAATAAATACTCCTCTGCCCTACTAAAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR GCA 90 bp | TTTTTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATTGTCATTCTCGTCCCTaGAGATGGAGAACTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSKSVVQFLSVNFVVDNCHSRP*RWRTAA Trigger: AGCGGCAGTTCTCCATCTGCAGGGACGAGAATGACA...ATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTGTGGTTGACAATGTCATGTCACATCTGCTAAAGCAACAAAATGCATACTTGTCTTCCAAGTTTTaGTTGTCTCTTTCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFVVDNVMSHLLKQQNAYLSSKF*LSLSAA Trigger: GGCGGCCGAAAGAGACAATCAAAACTTGGAAGACAA...GTATGCATTTTGTTGCTTTAGCAGATGTGACATGACATTGTCAACCACAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR CCA 90 bp | GGACACAATGAAATGGACTTGTGTGCAGACACACTCTTTTACGCAGATAAAAATTATCTGTGCCTAACTTaGAGAGTCCTCTACGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHNEMDLCADTLFYADKNYLCLT*RVLYGS Trigger: ACTTCCGTAGAGGACTCTCCAAGTTAGGCACAGATA...ATTTTTATCTGCGTAAAAGAGTGTGTCTGCACACAAGTCCATTTCATTGTGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS-3UTR TCA 90 bp | TTTTTGAGTAAGTCAGTTGTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATCACTCGGACATGAGCTaGGGTATGATTTCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSKSVVQFLSVNFVVDNHSDMS*GMISLC Trigger: ACAGAGTGAAATCATACCTCAGCTCATGTCCGAGTG...ATTGTCAACCACAAAGTTCACACTCAAAAACTGCACAACTGACTTACTCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| 3UTR CAA 72 bp | AATTTGCTTATCCAATCCATAGTTAGCATTAAGCTCTaGTGGAGATGTAAGAAACATCTTCCTGCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NLLIQSIVSIKL*WRCKKHLPAVT Trigger: TGTGACAGCAGGAAGATGTTTCTTACATCTCCACAAGAGCTTAATGCTAACTATGGATTGGATAAGCAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| 3UTR CAA 72 bp | TTCATACAGCTCAAAATTCCTACCAAAGTCACCTTCTaGCCAGGCTTGTTTTTAAAGAGGGATTTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIQLKIPTKVTF*PGLFLKRDLYS Trigger: AGAATATAAATCCCTCTTTAAAAACAAGCCTGGCAAGAAGGTGACTTTGGTAGGAATTTTGAGCTGTATGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS GCA 90 bp | GTCGGCCAGGCCCTCTGTCCCGCTGGCTGCCGAGGCCCACCTTGCTaGGGAGCCTGTCATTCTCGTCCCTGCAGATGGAGAACTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGQALCPAGCRGPPC*GACHSRPCRWRTAA Trigger: AGCGGCAGTTCTCCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGGTGGGCCTCGGCAGCCAGCGGGACAGAGGGCCTGGCCGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS GCA 90 bp | CCAGTCGGCCAGGCCCTCTGTCCCGCTGGCTGCCGAGGCCCACCTTaGTGCGGAGCCTGTCATTCTCGTCCCTGCAGATGGAGAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVGQALCPAGCRGPP*CGACHSRPCRWRTA Trigger: GGCAGTTCTCCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGGTGGGCCTCGGCAGCCAGCGGGACAGAGGGCCTGGCCGACTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS GCA 90 bp | GCTCGCGTGAGAGGCCTTTTCGTCGTCTGTGCCATTGACGCTGGATaGCTGAGTGGAAGACGGGGTTTCACACCCAGATTCTTGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: ARVRGLFVVCAIDAG*LSGRRGFTPRFLGM Trigger: CATTCCCAAGAATCTGGGTGTGAAACCCCGTCTTCCACTCAGGCATCCAGCGTCAATGGCACAGACGACGAAAAGGCCTCTCACGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGCTGGAGAGCAGCTAGTTCCCTCTGTGGACAGCCAGGCATGCATGCAATTCAACTCCATCTCCTaGTCTCGGACCTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQAGEQLVPSVDSQACMQFNSIS*SRTSDS Trigger: GGAGTCAGAGGTCCGAGACAAGGAGATGGAGTTGAA...TTGCATGCATGCCTGGCTGTCCACAGAGGGAACTAGCTGCTCTCCAGCCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS TCA 90 bp | GAGGCCTTTTCGTCGTCTGTGCCATTGACGCTGGATGCTTGGGAATaGTTGCTGGAGGTCTCGGTTTTCTCCTGGGACTTGTCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EAFSSSVPLTLDAWE*LLEVSVFSWDLSLA Trigger: AGCCAGAGACAAGTCCCAGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAGCATCCAGCGTCAATGGCACAGACGACGAAAAGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207371.2 |
||
| CDS GCA 90 bp | CCTGAGTGGAAGACGGGGTTTCACACCCAGATTCTTGGGAATGATTaGTGGAGGTCTCGGTTTTCTCCTGGGACTTGTCTCTGGCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PEWKTGFHTQILGND*WRSRFSPGTCLWLA Trigger: GGCTAGCCAGAGACAAGTCCCAGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAGAATCTGGGTGTGAAACCCCGTCTTCCACTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS CCA 90 bp | GAGTGGAAGACGGGGTTTCACACCCAGATTCTTGGGAATGATTGCTaGAGGTCTCGGTTTTCTCCTGGGACTTGTCTCTGGCTAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EWKTGFHTQILGNDC*RSRFSPGTCLWLAW Trigger: CCAGGCTAGCCAGAGACAAGTCCCAGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAGAATCTGGGTGTGAAACCCCGTCTTCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS-3UTR CAA 90 bp | CAGATCGCACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACATTCAACTCCATCTCCTaGTCTCGGACCTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QIAPAFTEANGECPTSTTFNSIS*SRTSDS Trigger: GGAGTCAGAGGTCCGAGACAAGGAGATGGAGTTGAA...TGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGTGCGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTGCCTGTTTATGATCACCTaGGCTCCATCCACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TEANGECPTSTTPLTHTCLFMIT*APSTLM Trigger: CATCAGTGTGGATGGAGCCAAGGTGATCATAAACAG...GCAAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACAGCGCGATCTTCAGCTaGTCATTCTCAGACTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCIYRSKWRMSYVYHTSHSAIFS*SFSDLR Trigger: CCTCAAGTCTGAGAATGACAAGCTGAAGATCGCGCT...GTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | TTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTTTTCAACTCCATCTCCTaGTCTCGGACCTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQKQMENVLRLPHLSHTLFNSIS*SRTSDS Trigger: GGAGTCAGAGGTCCGAGACAAGGAGATGGAGTTGAA...AAGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACCTGTTTATGATCACCTaGGCTCCATCCACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TCIYRSKWRMSYVYHTSHLFMIT*APSTLM Trigger: CATCAGTGTGGATGGAGCCAAGGTGATCATAAACAG...GTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACAACTTCTGTGACGTTTaGGTGAAAGTCATGTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TCIYRSKWRMSYVYHTSHNFCDV*VKVMFG Trigger: CCCGAACATGACTTTCACCAAAACGTCACAGAAGTT...GTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | GTGCAGTTTTTGAGTGTGAACTTTGTGGTTGACAATGTCATGTCACATCTGCTATTCAACTCCATCTCCTaGTCTCGGACCTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VQFLSVNFVVDNVMSHLLFNSIS*SRTSDS Trigger: GGAGTCAGAGGTCCGAGACAAGGAGATGGAGTTGAA...TAGCAGATGTGACATGACATTGTCAACCACAAAGTTCACACTCAAAAACTGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207371.2 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCATTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACATTTGTCTTCCAAGTTTaGATTGTCTCTTTCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PAFTEANGECPTSTTPLTFVFQV*IVSFGR Trigger: GCGGCCGAAAGAGACAATCAAAACTTGGAAGACAAA...TGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAATGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | TTTACAGAAGCAAATGGAGAATGTCCTACGTCTACCACACCTCTCACACACACTAACTTCTGTGACGTTTaGGTGAAAGTCATGTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FTEANGECPTSTTPLTHTNFCDV*VKVMFG Trigger: CCCGAACATGACTTTCACCAAAACGTCACAGAAGTT...AGTGTGTGTGAGAGGTGTGGTAGACGTAGGACATTCTCCATTTGCTTCTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207983.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAAAGAATCAGTGACTGGCTGGACACAATGAAATGGACTTGTGTGCAGACATTTGTCTTCCAAGTTTaGATTGTCTCTTTCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: IKRISDWLDTMKWTCVQTFVFQV*IVSFGR Trigger: GCGGCCGAAAGAGACAATCAAAACTTGGAAGACAAA...TGTCTGCACACAAGTCCATTTCATTGTGTCCAGCCAGTCACTGATTCTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098326.3 |
||
| CDS GCA 72 bp | CCTGCTCCAGTCGGCCAGGCCCTCTGTCCCGCTGGCTaGCGAGGCCCACCTTGCTGCGGAGCCTGTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAPVGQALCPAG*RGPPCCGACHS Trigger: AGAATGACAGGCTCCGCAGCAAGGTGGGCCTCGGCAGCCAGCGGGACAGAGGGCCTGGCCGACTGGAGCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS GCA 72 bp | CAGGCCCTCTGTCCCGCTGGCTGCCGAGGCCCACCTTaGTGCGGAGCCTGTCATTCTCGTCCCTGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: QALCPAGCRGPP*CGACHSRPCRW Trigger: CCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGGTGGGCCTCGGCAGCCAGCGGGACAGAGGGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS CAA 72 bp | CCAGGCCCTCTGTCCCGCTGGCTGCCGAGGCCCACCTaGCTGCGGAGCCTGTCATTCTCGTCCCTGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PGPLSRWLPRPT*LRSLSFSSLQM Trigger: CATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGGTGGGCCTCGGCAGCCAGCGGGACAGAGGGCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS CAA 90 bp | TCCAGTCGGCCAGGCCCTCTGTCCCGCTGGCTGCCGAGGCCCACCTaGCTGCGGAGCCTGTCATTCTCGTCCCTGCAGATGGAGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRPGPLSRWLPRPT*LRSLSFSSLQMENC Trigger: GCAGTTCTCCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGGTGGGCCTCGGCAGCCAGCGGGACAGAGGGCCTGGCCGACTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS GCA 72 bp | GCCCTCTGTCCCGCTGGCTGCCGAGGCCCACCTTGCTaGGGAGCCTGTCATTCTCGTCCCTGCAGATGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALCPAGCRGPPC*GACHSRPCRWR Trigger: TCTCCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGGTGGGCCTCGGCAGCCAGCGGGACAGAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS GCA 72 bp | GGCCCACCTTGCTGCGGAGCCTGTCATTCTCGTCCCTaGAGATGGAGAACTGCCGCTTCCACTGCTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPCCGACHSRP*RWRTAASTAPR Trigger: GCGTGGAGCAGTGGAAGCGGCAGTTCTCCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGGTGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS GCA 72 bp | CCTCGATCTTGCTGCGGAGCCTGTCATTCTCGTCCCTaGAGATGGAGAACTGCCGCTTCCACTGCTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: PRSCCGACHSRP*RWRTAASTAPR Trigger: GCGTGGAGCAGTGGAAGCGGCAGTTCTCCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGATCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS TCA 72 bp | GGCTCGCGTGAGAGGCCTTTTCGTCGTCTGTGCCATTaGCGCTGGATGCCTGAGTGGAAGACGGGGTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSRERPFRRLCH*RWMPEWKTGFH Trigger: GTGAAACCCCGTCTTCCACTCAGGCATCCAGCGTCAATGGCACAGACGACGAAAAGGCCTCTCACGCGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS TCA 72 bp | GGCTCGCGTGAGAGGCCTTTTCGTCGTCTGTGCCATTaGCGCTGGATGCTTGGGAATGATTGCTGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSRERPFRRLCH*RWMLGNDCWRS Trigger: AGACCTCCAGCAATCATTCCCAAGCATCCAGCGTCAATGGCACAGACGACGAAAAGGCCTCTCACGCGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207371.2 |
||
| CDS CAA 90 bp | CGCGTGAGAGGCCTTTTCGTCGTCTGTGCCATTGACGCTGGATGCTaGGGAATGATTGCTGGAGGTCTCGGTTTTCTCCTGGGACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVRGLFVVCAIDAGC*GMIAGGLGFLLGLV Trigger: GACAAGTCCCAGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAGCATCCAGCGTCAATGGCACAGACGACGAAAAGGCCTCTCACGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026922.15 ENSMUST00000207371.2 |
||
| CDS GCA 72 bp | TTATCTCGCTGCACTGTTCTTCCAGCTCCTCGATCTTaGTGCGGAGCCTGTCATTCTCGTCCCTGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRCTVLPAPRS*CGACHSRPCRW Trigger: CCATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGATCGAGGAGCTGGAAGAACAGTGCAGCGAGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS GCA 72 bp | AGAGGCCTTTTCGTCGTCTGTGCCATTGACGCTGGATaGCTGAGTGGAAGACGGGGTTTCACACCCAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: RGLFVVCAIDAG*LSGRRGFTPRF Trigger: GAATCTGGGTGTGAAACCCCGTCTTCCACTCAGGCATCCAGCGTCAATGGCACAGACGACGAAAAGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS CAA 90 bp | GACGCTGGATGCCTGAGTGGAAGACGGGGTTTCACACCCAGATTCTaGGGAATGATTGCTGGAGGTCTCGGTTTTCTCCTGGGACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DAGCLSGRRGFTPRF*GMIAGGLGFLLGLV Trigger: GACAAGTCCCAGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAGAATCTGGGTGTGAAACCCCGTCTTCCACTCAGGCATCCAGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS CAA 72 bp | TTTATCTCGCTGCACTGTTCTTCCAGCTCCTCGATCTaGCTGCGGAGCCTGTCATTCTCGTCCCTGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: FISLHCSSSSSI*LRSLSFSSLQM Trigger: CATCTGCAGGGACGAGAATGACAGGCTCCGCAGCAAGATCGAGGAGCTGGAAGAACAGTGCAGCGAGATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS GCA 72 bp | GCTGTGTGTTCTTCTCCTTCTCCCTGTTTATCTCGCTaGACTGTTCTTCCAGCTCCTCGATCTTGCTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVCSSPSPCLSR*TVLPAPRSCCG Trigger: TCCGCAGCAAGATCGAGGAGCTGGAAGAACAGTGCAGCGAGATAAACAGGGAGAAGGAGAAGAACACACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||
| CDS GCA 72 bp | AAGACGGGGTTTCACACCCAGATTCTTGGGAATGATTaGTGGAGGTCTCGGTTTTCTCCTGGGACTTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KTGFHTQILGND*WRSRFSPGTCL Trigger: GAGACAAGTCCCAGGAGAAAACCGAGACCTCCAGCAATCATTCCCAAGAATCTGGGTGTGAAACCCCGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098326.3 ENSMUST00000207983.2 ENSMUST00000208937.2 |
||
| CDS GCA 72 bp | GCTGTGTGTTCTTCTCCTTCTCCCTGTTTATCTCGCTaGACTGTTCTTCCAGCTCCTCGATCAAGAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVCSSPSPCLSR*TVLPAPRSRKA Trigger: TGCCTTTCTTGATCGAGGAGCTGGAAGAACAGTGCAGCGAGATAAACAGGGAGAAGGAGAAGAACACACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207371.2 |
||
| CDS TCA 72 bp | AACTTCTCAGAGACATATTCACACTCGGACATGAGCTaGGGTATGATTTCACTCTGTTTTCGGAGATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: NFSETYSHSDMS*GMISLCFRRSF Trigger: GAAAGATCTCCGAAAACAGAGTGAAATCATACCTCAGCTCATGTCCGAGTGTGAATATGTCTCTGAGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026922.15 ENSMUST00000098326.3 ENSMUST00000207983.2 |
||