Pregenerated sensors for HOMER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007617Ensembl transcript IDs: ENSMUST00000060490.11, ENSMUST00000079086.8, ENSMUST00000080127.12, ENSMUST00000102752.10, ENSMUST00000109492.9, ENSMUST00000109493.9, ENSMUST00000109494.8, ENSMUST00000109495.8, ENSMUST00000109496.8, ENSMUST00000109497.8, ENSMUST00000109498.8
Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCTCTTCACTATCACAGGCATTGTACAGCAAGATACACGATTCTaGTGCAGTTCCTACTCGCAGAGCAGGCAGCACTTGGCTTACTTT | + |
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Preference number: 1 (lower is better) Translates to: TLFTITGIVQQDTRF*CSSYSQSRQHLAYF Trigger: AAAGTAAGCCAAGTGCTGCCTGCTCTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTGCTGTACAATGCCTGTGATAGTGAAGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR GCA 90 bp | AAACAATGTAGGTGGAGAGTTGGCTCAGTGGTTAAGAGCACTAGTTaGTCCTGTAAAGGACTTAGCTTCCGTTTCCAGCACCCATATGGT | + |
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Preference number: 1 (lower is better) Translates to: KQCRWRVGSVVKSTS*SCKGLSFRFQHPYG Trigger: ACCATATGGGTGCTGGAAACGGAAGCTAAGTCCTTTACAGGAGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCCACCTACATTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR TCA 90 bp | TCTCTGAGCATGTGTACCCAAAAGATTCCTTCTATAATAGACAGGTaGGGGAAATACCCTAAGGTTGATGGAGGTGACAGGCAGGATGGA | + |
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Preference number: 1 (lower is better) Translates to: SLSMCTQKIPSIIDR*GKYPKVDGGDRQDG Trigger: TCCATCCTGCCTGTCACCTCCATCAACCTTAGGGTATTTCCCTCACCTGTCTATTATAGAAGGAATCTTTTGGGTACACATGCTCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
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| 3UTR TCA 90 bp | ACTCTTAAGGAAAGCACCAGCAGCTGCCATCTCAGGTCACATGACTaGCTGGGTCCCTATCCTTATACTTTTATCTGTTTGGCTTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: TLKESTSSCHLRSHD*LGPYPYTFICLAFA Trigger: AGCAAAAGCCAAACAGATAAAAGTATAAGGATAGGGACCCAGTCAGTCATGTGACCTGAGATGGCAGCTGCTGGTGCTTTCCTTAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR GCA 90 bp | GTGTGGCTCACTTGGTGCAGGGCACACCTATCATGTGTAAAGACCTaGAGTTGCATCTCAACATGCAATAATAACACATTAGTAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: VWLTWCRAHLSCVKT*SCISTCNNNTLVEN Trigger: GTTCTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCAGGTCTTTACACATGATAGGTGTGCCCTGCACCAAGTGAGCCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR CCA 90 bp | CCACAGTCACAATTTAGATGCAGTCCTCTCGGCTTGACCGCTAGGTaGAAGTGGCCGTCCTTGAAAACAGTTATATACCTTAAAATTATC | + |
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Preference number: 1 (lower is better) Translates to: PQSQFRCSPLGLTAR*KWPSLKTVIYLKII Trigger: GATAATTTTAAGGTATATAACTGTTTTCAAGGACGGCCACTTCCACCTAGCGGTCAAGCCGAGAGGACTGCATCTAAATTGTGACTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR CCA 90 bp | TTAAGGAAAGCACCAGCAGCTGCCATCTCAGGTCACATGACTGACTaGGTCCCTATCCTTATACTTTTATCTGTTTGGCTTTTGCTCTTT | + |
|
Preference number: 1 (lower is better) Translates to: LRKAPAAAISGHMTD*VPILILLSVWLLLF Trigger: AAAGAGCAAAAGCCAAACAGATAAAAGTATAAGGATAGGGACCCAGTCAGTCATGTGACCTGAGATGGCAGCTGCTGGTGCTTTCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR GCA 90 bp | CTCACTTGGTGCAGGGCACACCTATCATGTGTAAAGACCTGCAGTTaGATCTCAACATGCAATAATAACACATTAGTAGAGAACAAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: LTWCRAHLSCVKTCS*ISTCNNNTLVENKV Trigger: CACCTTGTTCTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCAGGTCTTTACACATGATAGGTGTGCCCTGCACCAAGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR GCA 90 bp | AGGGCACACCTATCATGTGTAAAGACCTGCAGTTGCATCTCAACATaGAATAATAACACATTAGTAGAGAACAAGGTGAGTGCACTGATA | + |
|
Preference number: 1 (lower is better) Translates to: RAHLSCVKTCSCIST*NNNTLVENKVSALI Trigger: TATCAGTGCACTCACCTTGTTCTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCAGGTCTTTACACATGATAGGTGTGCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR TCA 90 bp | GTAAAAGTGATTCCTATCAGGAACTCAAGAACAGGGAAATCACGATaGGGACCAATTCTAAGGAAGCAATACCAATACAATGAGATTAGC | + |
|
Preference number: 1 (lower is better) Translates to: VKVIPIRNSRTGKSR*GPILRKQYQYNEIS Trigger: GCTAATCTCATTGTATTGGTATTGCTTCCTTAGAATTGGTCCTCATCGTGATTTCCCTGTTCTTGAGTTCCTGATAGGAATCACTTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR TCA 90 bp | CATGAACAACTTTCTTCAAAATGTCTACCATCTCATAGAGAATTATaGGCATTAGCAGCAGAGTGTCCTTACATTCCAAAGTTCCCATAT | + |
|
Preference number: 1 (lower is better) Translates to: HEQLSSKCLPSHREL*ALAAECPYIPKFPY Trigger: ATATGGGAACTTTGGAATGTAAGGACACTCTGCTGCTAATGCTCATAATTCTCTATGAGATGGTAGACATTTTGAAGAAAGTTGTTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR CAA 90 bp | AAGACCCATCTGCCACAGTCACAATTTAGATGCAGTCCTCTCGGCTaGACCGCTAGGTGGAAGTGGCCGTCCTTGAAAACAGTTATATAC | + |
|
Preference number: 2 (lower is better) Translates to: KTHLPQSQFRCSPLG*TARWKWPSLKTVIY Trigger: GTATATAACTGTTTTCAAGGACGGCCACTTCCACCTAGCGGTCAAGCCGAGAGGACTGCATCTAAATTGTGACTGTGGCAGATGGGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGTTGGCTCAGTGGTTAAGAGCACTAGTTGCTCCTGTAAAGGACTTAGCTGTCAAGCCTTCCTTCTaGTGGCATCTGCCATCAATG | + |
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Preference number: 2 (lower is better) Translates to: GELAQWLRALVAPVKDLAVKPSF*WHLPSM Trigger: CATTGATGGCAGATGCCAGCAGAAGGAAGGCTTGAC...AGCTAAGTCCTTTACAGGAGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR CCA 90 bp | CATTTACAGTCACAGTCCTCCTGTTCCACACATCCTAAGCTTCTGACAGCGTCTGGAGAGTTGGCTCAGTaGTTAAGAGCACTAGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HLQSQSSCSTHPKLLTASGELAQ*LRALVA Trigger: AGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCC...AGACGCTGTCAGAAGCTTAGGATGTGTGGAACAGGAGGACTGTGACTGTAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR CCA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTACCGCTAGGTGGAAGTaGCCGTCCTTGAAAACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VHSLTPELGTQAYTKKNPTARWK*PSLKTV Trigger: AACTGTTTTCAAGGACGGCCACTTCCACCTAGCGGT...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCCTACTCGCAGAGCAGGCAGCACTTGGCTTACTTTTAAATTGTTTTGTGCCGTCAAGGACGGACTaGTGTATTTCAGTTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QFLLAEQAALGLLLNCFVPSRTD*CISVLC Trigger: ACACAGAACTGAAATACAGCAGTCCGTCCTTGACGG...CACAAAACAATTTAAAAGTAAGCCAAGTGCTGCCTGCTCTGCGAGTAGGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTAAACGCTTAAGTAGCCTTAGAAGACTGAGGAGACGATCAAGTACATTCCAAGATACACGATTCTaGTGCAGTTCCTACTCGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLKRLSSLRRLRRRSSTFQDTRF*CSSYSQ Trigger: CTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTG...GAATGTACTTGATCGTCTCCTCAGTCTTCTAAGGCTACTTAAGCGTTTAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
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| 3UTR-3UTR TCA 90 bp | CATTTACAGTCACAGTCCTCCTGTTCCACACATCCTAAGCTTCTGACAGCGTCTGCAGTAAAATTGGACTaGACAAAAGGAGGAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: HLQSQSSCSTHPKLLTASAVKLD*TKGGRY Trigger: GTATCTTCCTCCTTTTGTTCAGTCCAATTTTACTGC...AGACGCTGTCAGAAGCTTAGGATGTGTGGAACAGGAGGACTGTGACTGTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGTTGGCTCAGTGGTTAAGAGCACTAGTTGCTCCTGTAAAGGACTTAGCTTATCTGTTTGGCTTTTaGTCTTTTCACTATGTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: GELAQWLRALVAPVKDLAYLFGF*SFHYVP Trigger: CGGCACATAGTGAAAAGAGCAAAAGCCAAACAGATA...AGCTAAGTCCTTTACAGGAGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR TCA 90 bp | CATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAAGAGCTTATCACGGAGTTACTCTaGTTTTCAGCAGATCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: HHGVTLIFSRSFPLHQELITELL*FSADLS Trigger: GGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGAT...AAGCTCTTGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTGGTCTAGTATGTTTAATCGTACCCTGTCTTCTGTaGAAACTCTGTAGGCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LFHSLLRKIFHAGLVCLIVPCLL*KLCRPV Trigger: CACAGGCCTACAGAGTTTTCACAGAAGACAGGGTAC...GATTAAACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTTGCATCTCAACATGCAATAATAACACATTAGTAGAGAACAAGGTGAGTGCCATGCTTTTTCCCTaGCTGTTAAGGCCGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: CSCISTCNNNTLVENKVSAMLFP*LLRPKW Trigger: CCACTTCGGCCTTAACAGTCAGGGAAAAAGCATGGC...ACTCACCTTGTTCTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR GCA 90 bp | CATTTACAGTCACAGTCCTCCTGTTCCACACATCCTAAGCTTCTGACAGCGTCTGTAAAGACCTGCAGTTaGATCTCAACATGCAATAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLQSQSSCSTHPKLLTASVKTCS*ISTCNN Trigger: ATTATTGCATGTTGAGATGCAACTGCAGGTCTTTAC...AGACGCTGTCAGAAGCTTAGGATGTGTGGAACAGGAGGACTGTGACTGTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR CCA 90 bp | TTAAAATGTGCCTCACAACATCCCTGTGAGGTAGGGAGGTGGATTGGTGACAAAAGCTTTTCAGTCTTCTaGGTATTAGTGAAGCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LKCASQHPCEVGRWIGDKSFSVF*VLVKQG Trigger: ACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCT...TTTGTCACCAATCCACCTCCCTACCTCACAGGGATGTTGTGAGGCACATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
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| 3UTR-3UTR TCA 90 bp | CTTCATCAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACAATCACGGAGTTACTCTaGTTTTCAGCAGATCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LHQELFSLLGISEARSMTITELL*FSADLS Trigger: GGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGAT...TGTCATGGACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCTCTTGATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTGGTCTAGTATGTTTAATCAAGCCTTCCTTCTGCTaGCATCTGCCATCAATGCTA | + |
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Preference number: 2 (lower is better) Translates to: LFHSLLRKIFHAGLVCLIKPSFC*HLPSML Trigger: TAGCATTGATGGCAGATGCCAGCAGAAGGAAGGCTT...GATTAAACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTAAACGCTTAAGTAGCCTTAGAAGACTGAGGAGACGATCAAGTACATTCCTCTCCTCATGTGAGTaGAGGTTTAAAATAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SLKRLSSLRRLRRRSSTFLSSCE*RFKIVK Trigger: CTTGACTATTTTAAACCTTCACTCACATGAGGAGAG...GAATGTACTTGATCGTCTCCTCAGTCTTCTAAGGCTACTTAAGCGTTTAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTAGAGCAGGCAGCACTTaGCTTACTTTTAAATTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VHSLTPELGTQAYTKKNPRAGST*LTFKLF Trigger: AAACAATTTAAAAGTAAGCCAAGTGCTGCCTGCTCT...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTCATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAAGCTTTTCAGTCTTCTaGGTATTAGTGAAGCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSSSRSYSDFQQIFPPSSSFSVF*VLVKQG Trigger: ACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCT...TGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATGAAGAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCTTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTGGTCTAGTATGTTCACCTAGGAGAGTTTaGAATATCTCACTTTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: TSLFHSLLRKIFHAGLVCSPRRV*NISLCN Trigger: ATTGCAAAGTGAGATATTTCAAACTCTCCTAGGTGA...ACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAAGGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR CCA 90 bp | ACATCTCATGCAGCCAAATTATTCTTTATACAAGGATGCTCACTAATGAACCAATTGTGTGACATGAGTTaGTCTTTTTACACTGTTATG | + |
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Preference number: 2 (lower is better) Translates to: TSHAAKLFFIQGCSLMNQLCDMS*SFYTVM Trigger: CATAACAGTGTAAAAAGACCAACTCATGTCACACAA...TTGGTTCATTAGTGAGCATCCTTGTATAAAGAATAATTTGGCTGCATGAGATGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109492.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGTTGGCTCAGTGGTTAAGAGCACTAGTTGCTCCTGTAAAGGACTTAGCTAGGAGTGTGGCTCACTaGGTGCAGGGCACACCTATC | + |
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Preference number: 3 (lower is better) Translates to: GELAQWLRALVAPVKDLARSVAH*VQGTPI Trigger: GATAGGTGTGCCCTGCACCAAGTGAGCCACACTCCT...AGCTAAGTCCTTTACAGGAGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR TCA 72 bp | ATGCTAACAGGCTCGTGCTTGGTACCCTGTCTTCTGTaGAAACTCTGTAGGCCTGTGGTAAAGCTTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: MLTGSCLVPCLL*KLCRPVVKLSF Trigger: GAAGGAAAGCTTTACCACAGGCCTACAGAGTTTTCACAGAAGACAGGGTACCAAGCACGAGCCTGTTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR CCA 72 bp | GCACCAGCAGCTGCCATCTCAGGTCACATGACTGACTaGGTCCCTATCCTTATACTTTTATCTGTTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: APAAAISGHMTD*VPILILLSVWL Trigger: AAGCCAAACAGATAAAAGTATAAGGATAGGGACCCAGTCAGTCATGTGACCTGAGATGGCAGCTGCTGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR TCA 72 bp | GAAAGCACCAGCAGCTGCCATCTCAGGTCACATGACTaGCTGGGTCCCTATCCTTATACTTTTATCTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: ESTSSCHLRSHD*LGPYPYTFICL Trigger: CAAACAGATAAAAGTATAAGGATAGGGACCCAGTCAGTCATGTGACCTGAGATGGCAGCTGCTGGTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR GCA 72 bp | AATGAAATGGTAAGTCTAGGAGTGTGGCTCACTTGGTaGAGGGCACACCTATCATGTGTAAAGACCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: NEMVSLGVWLTW*RAHLSCVKTCS Trigger: ACTGCAGGTCTTTACACATGATAGGTGTGCCCTGCACCAAGTGAGCCACACTCCTAGACTTACCATTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR TCA 72 bp | TGCACTGATAAAGTAAGACTGGCCATGCTTTTTCCCTaGCTGTTAAGGCCGAAGTGGTACTTCCATTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: CTDKVRLAMLFP*LLRPKWYFHWS Trigger: ACTCCAATGGAAGTACCACTTCGGCCTTAACAGTCAGGGAAAAAGCATGGCCAGTCTTACTTTATCAGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR CCA 72 bp | AGATGCAGTCCTCTCGGCTTGACCGCTAGGTGGAAGTaGCCGTCCTTGAAAACAGTTATATACCTTAAAATT | + |
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Preference number: 3 (lower is better) Translates to: RCSPLGLTARWK*PSLKTVIYLKI Trigger: AATTTTAAGGTATATAACTGTTTTCAAGGACGGCCACTTCCACCTAGCGGTCAAGCCGAGAGGACTGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR CCA 72 bp | AATAATGAAATGGTAAGTCTAGGAGTGTGGCTCACTTaGTGCAGGGCACACCTATCATGTGTAAAGACCTGC | + |
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Preference number: 3 (lower is better) Translates to: NNEMVSLGVWLT*CRAHLSCVKTC Trigger: GCAGGTCTTTACACATGATAGGTGTGCCCTGCACCAAGTGAGCCACACTCCTAGACTTACCATTTCATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR-3UTR CAA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTTGGAAGTGGCCGTCCTaGAAAACAGTTATATACCTT | + |
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Preference number: 3 (lower is better) Translates to: VHSLTPELGTQAYTKKNPWKWPS*KTVIYL Trigger: AAGGTATATAACTGTTTTCAAGGACGGCCACTTCCA...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGTTGGCTCAGTGGTTAAGAGCACTAGTTGCTCCTGTAAAGGACTTAGCTGAACTGCAGTCTTTTTaGTTAAAAGACTATGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: GELAQWLRALVAPVKDLAELQSF*LKDYGH Trigger: GTGACCATAGTCTTTTAACAAAAAAGACTGCAGTTC...AGCTAAGTCCTTTACAGGAGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR TCA 72 bp | ATGTGTACCCAAAAGATTCCTTCTATAATAGACAGGTaGGGGAAATACCCTAAGGTTGATGGAGGTGACAGG | + |
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Preference number: 3 (lower is better) Translates to: MCTQKIPSIIDR*GKYPKVDGGDR Trigger: CCTGTCACCTCCATCAACCTTAGGGTATTTCCCTCACCTGTCTATTATAGAAGGAATCTTTTGGGTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
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| 3UTR TCA 72 bp | GCAGTACCTCCAAAGTGCACAAAGTCCAGCAGCACCTaGGAATGTATTATCCAAACTTTACAAGAATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: AVPPKCTKSSST*ECIIQTLQESK Trigger: TTTGGATTCTTGTAAAGTTTGGATAATACATTCTCAGGTGCTGCTGGACTTTGTGCACTTTGGAGGTACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR GCA 72 bp | TGCAGGGCACACCTATCATGTGTAAAGACCTGCAGTTaGATCTCAACATGCAATAATAACACATTAGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: CRAHLSCVKTCS*ISTCNNNTLVE Trigger: CTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCAGGTCTTTACACATGATAGGTGTGCCCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| 3UTR GCA 72 bp | TTCCTTGTTCCACAGCCTGCTAAGAAAAATCTTCCATaGTGGTCTAGTATGTTTAATCCTATGCCCCTATTA | + |
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Preference number: 3 (lower is better) Translates to: FLVPQPAKKNLP*WSSMFNPMPLL Trigger: TAATAGGGGCATAGGATTAAACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| 3UTR CCA 72 bp | CTTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTaGTCTAGTATGTTTAATCCTATGCCCCTATTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LVPQPAKKNLPC*SSMFNPMPLLM Trigger: CATTAATAGGGGCATAGGATTAAACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| 3UTR TCA 72 bp | CTTTCTTCAAAATGTCTACCATCTCATAGAGAATTATaGGCATTAGCAGCAGAGTGTCCTTACATTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSKCLPSHREL*ALAAECPYIPK Trigger: CTTTGGAATGTAAGGACACTCTGCTGCTAATGCTCATAATTCTCTATGAGATGGTAGACATTTTGAAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| 3UTR TCA 72 bp | ACATATAAACGCTTGACACCGAAACACTTACTACAGTaGACTTCACTGTCTTCTTTTTCAGAAGCATGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TYKRLTPKHLLQ*TSLSSFSEAWK Trigger: TTTCCATGCTTCTGAAAAAGAAGACAGTGAAGTTCACTGTAGTAAGTGTTTCGGTGTCAAGCGTTTATATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| 3UTR TCA 72 bp | TTAAAAATCCAACCACTTTCTAGAATTCTACACAAATaGCACCAGGAAGCAAACAATTACCTTGAACGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKIQPLSRILHK*HQEANNYLERE Trigger: CTCTCGTTCAAGGTAATTGTTTGCTTCCTGGTGTCATTTGTGTAGAATTCTAGAAAGTGGTTGGATTTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR TCA 90 bp | AAAGCACCAGCAGCTGCCATCTCAGGTCACATGACTGACTGGGTCCCTATCCTTCTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAPAAAISGHMTDWVPILLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...AAGGATAGGGACCCAGTCAGTCATGTGACCTGAGATGGCAGCTGCTGGTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR GCA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCTCAGTGACCCGCTTGTaGAGCCGCTCTGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRSPNSPRKTDSISPSIGSVTRL*SRSASS Trigger: GGAGGAAGCAGAGCGGCTGCACAAGCGGGTCACTGA...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTTCAGTGACCCGCTTGTaGAGCCGCTCTGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSPRKTDSISPSIGTSVTRL*SRSASS Trigger: GGAGGAAGCAGAGCGGCTGCACAAGCGGGTCACTGA...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCCTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRSPNSPRKTDSISPSIGLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAACTTGTGCAGCCGCTCTaGTTCCTCCTGGTACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNSPRKTDSISPSIGTELVQPL*FLLVRS Trigger: GCTGCGTACCAGGAGGAAGCAGAGCGGCTGCACAAG...TTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | GCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAACTTGTGCAGCCGCTCTaGTTCCTCCTGGTACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQTVLGRQTASLHLLALKLVQPL*FLLVRS Trigger: GCTGCGTACCAGGAGGAAGCAGAGCGGCTGCACAAG...TTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAGCTTCACATTGGCAGTaGACTCCAGCAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YGAQTVLGRQTASLHLLAASHWQ*TPAGLQ Trigger: CTGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAGC...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTTCCACTGCTTCACATTaGCAGTGGACTCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSPRKTDSISPSIGTSTASH*QWTPAG Trigger: CCCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGA...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGGCCTCTTGTTCGTTCTaGCTCTTCTCCAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAQTVLGRQTASLHLLALASCSF*LFSRRC Trigger: ACAGCGCCTGGAGAAGAGCCAGAACGAACAAGAGGC...CAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| 3UTR CAA 72 bp | CTGCCACAGTCACAATTTAGATGCAGTCCTCTCGGCTaGACCGCTAGGTGGAAGTGGCCGTCCTTGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPQSQFRCSPLG*TARWKWPSLKT Trigger: TGTTTTCAAGGACGGCCACTTCCACCTAGCGGTCAAGCCGAGAGGACTGCATCTAAATTGTGACTGTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | TCTTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTACCAGCAGGGCTGCAGTaGGTTTGGCATTGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWYGAQTVLGRQTASLHLPAGLQ*VWHCCL Trigger: AAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGG...TAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTTAGTTAATCTGACACCCTCTTCTGGATCCTGTGGGCACCAGGCATCGCCTGTGAAGGGGTACTaGTCAGCTCCATCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLVNLTPSSGSCGHQASPVKGY*SAPSSP Trigger: AGGAGAAGATGGAGCTGACCAGTACCCCTTCACAGG...CGATGCCTGGTGCCCACAGGATCCAGAAGAGGGTGTCAGATTAACTAAAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CCA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCCTCTTGTTCGTTCTaGCTCTTCTCCAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WYGAQTVLGRQTASLHLLASCSF*LFSRRC Trigger: ACAGCGCCTGGAGAAGAGCCAGAACGAACAAGAGGC...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGGCATTGTACAGCAAGATACACGATTCTGATGCAGTTCCTACTCGCAGACTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQALYSKIHDSDAVPTRRLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...TCTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTGCTGTACAATGCCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | ATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTTCAATGACTGTCCTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IIPPSQDREGQQIISMTVLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...GACAGTCATTGAAATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTAGCTCCATCTTCTCCTaGGACTTCTCCTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSPRKTDSISPSIGTSSIFS*DFSFAS Trigger: GCTTGCAAAGGAGAAGTCGCAGGAGAAGATGGAGCT...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAGCTCCATCTTCTCCTaGGACTTCTCCTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRSPNSPRKTDSISPSIGSSIFS*DFSFAS Trigger: GCTTGCAAAGGAGAAGTCGCAGGAGAAGATGGAGCT...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTACCTGTGAAGGGGTACTaGTCAGCTCCATCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWYGAQTVLGRQTASLHLPVKGY*SAPSSP Trigger: AGGAGAAGATGGAGCTGACCAGTACCCCTTCACAGG...TAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGCCTCTTGTTCGTTCTaGCTCTTCTCCAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVRSPNSPRKTDSISPSIASCSF*LFSRRC Trigger: ACAGCGCCTGGAGAAGAGCCAGAACGAACAAGAGGC...AATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTCTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRKTDSISPSIGTEISLSLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...AGAGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTTCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSPRKTDSISPSIGTSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTAAGCTCCATCTTCTCCTaGGACTTCTCCTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWYGAQTVLGRQTASLHLSSIFS*DFSFAS Trigger: GCTTGCAAAGGAGAAGTCGCAGGAGAAGATGGAGCT...TAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACCAGCAGCTGCCATCTCAGGTCACATGACTGACTGGGTCCCTATCCTTATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAPAAAISGHMTDWVPILMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...AAGGATAGGGACCCAGTCAGTCATGTGACCTGAGATGGCAGCTGCTGGTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR GCA 90 bp | TTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGACTCCAGCAGGGCTaGAGTGAGTTTGGCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVRSPNSPRKTDSISPSIGLQQG*SEFGIV Trigger: AACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCC...AATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAAGCTGTTGCTTCCACTaGTTCACATTGGCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YGAQTVLGRQTASLHLLASCCFH*FTLAVD Trigger: GTCCACTGCCAATGTGAAGCAGTGGAAGCAACAGCT...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGAGCTGTTGCTTCCACTaGTTCACATTGGCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WYGAQTVLGRQTASLHLLSCCFH*FTLAVD Trigger: GTCCACTGCCAATGTGAAGCAGTGGAAGCAACAGCT...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGGATTAATTGGTAATGGCCCTTTCTCAGCAGCGAAAAATTATCCTGAGCTTGTGCAGCCGCTCTaGTTCCTCCTGGTACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQGLIGNGPFSAAKNYPELVQPL*FLLVRS Trigger: GCTGCGTACCAGGAGGAAGCAGAGCGGCTGCACAAG...CTCAGGATAATTTTTCGCTGCTGAGAAAGGGCCATTACCAATTAATCCTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | AACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCATCAGTGACCCGCTTGTaGAGCCGCTCTGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSPRKTDSISPSIGTEISSVTRL*SRSASS Trigger: GGAGGAAGCAGAGCGGCTGCACAAGCGGGTCACTGA...TGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGTCTCTTCCAGTTCCTaGACTGTCTGGTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WYGAQTVLGRQTASLHLLVSSSS*TVWFSS Trigger: AGAGCTGAACCAGACAGTGCAGGAACTGGAAGAGAC...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGTCTAGGTCAGACAGCTaGCCCTCCAGGTCTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: GAQTVLGRQTASLHLLALSRSDS*PSRSLF Trigger: AAATAAAGACCTGGAGGGGCAGCTGTCTGACCTAGA...CAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGTGTCTTCAGGTTACTaGGGAAAGCCTCTTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSPRKTDSISPSIGTVSSGY*GKPLVR Trigger: ACGAACAAGAGGCTTTCCGCAGTAACCTGAAGACAC...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCTACTCGCAGAGCAGGCAGCACTTGGCTTACTTTTAAATTGTTTTGTGGCTTCACATTGGCAGTaGACTCCAGCAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFLLAEQAALGLLLNCFVASHWQ*TPAGLQ Trigger: CTGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAGC...CACAAAACAATTTAAAAGTAAGCCAAGTGCTGCCTGCTCTGCGAGTAGGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | CCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTGCTTCACATTGGCAGTaGACTCCAGCAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNSPRKTDSISPSIGTEIASHWQ*TPAGLQ Trigger: CTGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAGC...AATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCATTCAGCTCTGTCTTGTaGCTGTGCACAGCGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YGAQTVLGRQTASLHLLAFSSVL*LCTAFA Trigger: AGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAA...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTCAGCTCTGTCTTGTaGCTGTGCACAGCGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWYGAQTVLGRQTASLHLFSSVL*LCTAFA Trigger: AGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAA...TAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCGAGTCCCTCTGTTCTTaGAGTTCTCTGGCATTATCG | + |
|
Preference number: 4 (lower is better) Translates to: VRSPNSPRKTDSISPSIGESLCS*SSLALS Trigger: CGATAATGCCAGAGAACTCCAAGAACAGAGGGACTC...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAGTCCCTCTGTTCTTaGAGTTCTCTGGCATTATCG | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSPRKTDSISPSIGTESLCS*SSLALS Trigger: CGATAATGCCAGAGAACTCCAAGAACAGAGGGACTC...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAAGGTTGCTCCGTTGTTaGGCTGCCTTTACAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YGAQTVLGRQTASLHLLARLLRC*AAFTKC Trigger: GCACTTTGTAAAGGCAGCCCAACAACGGAGCAACCT...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTCCAGCAGGGCTGCAGTaGGTTTGGCATTGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNSPRKTDSISPSIGTEIPAGLQ*VWHCCL Trigger: AAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGG...AATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | GTTATAATAACTTATACACAGATGGGACTGACCCCTGCTCTCCTCCTGGGTCACTGCACAGCGTTTGCTTaGCTACTAACACACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIITYTQMGLTPALLLGHCTAFA*LLTHSS Trigger: GCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCA...GTGACCCAGGAGGAGAGCAGGGGTCAGTCCCATCTGTGTATAAGTTATTATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAAGATACAGTAACTGCATaGTTGCTGGTGGGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQTVLGRQTASLHLLALKDTVTA*LLVGTQ Trigger: CTGGGTACCCACCAGCAAGCATGCAGTTACTGTATC...TTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | CATTTACAGTCACAGTCCTCCTGTTCCACACATCCTAAGCTTCTGACAGCGTCTGATACAGTAACTGCATaGTTGCTGGTGGGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLQSQSSCSTHPKLLTASDTVTA*LLVGTQ Trigger: CTGGGTACCCACCAGCAAGCATGCAGTTACTGTATC...AGACGCTGTCAGAAGCTTAGGATGTGTGGAACAGGAGGACTGTGACTGTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR GCA 90 bp | CATTTACAGTCACAGTCCTCCTGTTCCACACATCCTAAGCTTCTGACAGCGTCTAGCTCCATCTTCTCCTaGGACTTCTCCTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLQSQSSCSTHPKLLTASSSIFS*DFSFAS Trigger: GCTTGCAAAGGAGAAGTCGCAGGAGAAGATGGAGCT...AGACGCTGTCAGAAGCTTAGGATGTGTGGAACAGGAGGACTGTGACTGTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAQTVLGRQTASLHLLALMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...CAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRSPNSPRKTDSISPSIGMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCATTGTACAGCAAGATACACGATTCTGATGCAGTTCCTACTCGCAGAGGACTCCAGCAGGGCTaGAGTGAGTTTGGCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQALYSKIHDSDAVPTRRGLQQG*SEFGIV Trigger: AACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCC...TCTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTGCTGTACAATGCCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | GCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAAGTCTCTTCCAGTTCCTaGACTGTCTGGTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQTVLGRQTASLHLLALKVSSSS*TVWFSS Trigger: AGAGCTGAACCAGACAGTGCAGGAACTGGAAGAGAC...TTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGTCTAGGTCAGACAGCTaGCCCTCCAGGTCTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: WYGAQTVLGRQTASLHLLSRSDS*PSRSLF Trigger: AAATAAAGACCTGGAGGGGCAGCTGTCTGACCTAGA...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTAGTGTCTTCAGGTTACTaGGGAAAGCCTCTTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SWYGAQTVLGRQTASLHLVSSGY*GKPLVR Trigger: ACGAACAAGAGGCTTTCCGCAGTAACCTGAAGACAC...TAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTTCCACTGCTTCACATTaGCAGTGGACTCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSLTPELGTQAYTKKNPSTASH*QWTPAG Trigger: CCCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGA...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | TTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTTTCAGCTCTGTCTTGTaGCTGTGCACAGCGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVRSPNSPRKTDSISPSIFSSVL*LCTAFA Trigger: AGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAA...AATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTCAGCTCTGTCTTGTaGCTGTGCACAGCGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQTVLGRQTASLHLLALKFSSVL*LCTAFA Trigger: AGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAA...TTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAACCTCCCAGTGTTTGCTaGTTGCTGAACTATGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AQTVLGRQTASLHLLALKPPSVC*LLNYVE Trigger: TTCCACATAGTTCAGCAATCAGCAAACACTGGGAGG...TTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGGATTAATTGGTAATGGCCCTTTCTCAGCAGCGAAAAATTATCCTGAGCCAGCAGGGCTGCAGTaGGTTTGGCATTGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WQGLIGNGPFSAAKNYPEPAGLQ*VWHCCL Trigger: AAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGG...CTCAGGATAATTTTTCGCTGCTGAGAAAGGGCCATTACCAATTAATCCTTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGACTTCCTGTAGTTTCTaGGTCAAAGAGTCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WYGAQTVLGRQTASLHLLTSCSF*VKESLC Trigger: ACAGAGGGACTCTTTGACTCAGAAACTACAGGAAGT...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCATCAATGCTAACAGGCTCGTGCTTGGTACCCTGTCTTCTGTGAAAACTTCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SAINANRLVLGTLSSVKTSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...AGTTTTCACAGAAGACAGGGTACCAAGCACGAGCCTGTTAGCATTGATGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR GCA 90 bp | GCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: AQTVLGRQTASLHLLALKSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...TTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTCCTGTGAAGGGGTACTaGTCAGCTCCATCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHSLTPELGTQAYTKKNPPVKGY*SAPSSP Trigger: AGGAGAAGATGGAGCTGACCAGTACCCCTTCACAGG...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTCCTGTGAAGGGGTACTaGTCAGCTCCATCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRKTDSISPSIGTEISLSPVKGY*SAPSSP Trigger: AGGAGAAGATGGAGCTGACCAGTACCCCTTCACAGG...AGAGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CCA 90 bp | CATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAAGAGCTTCCTGTGAAGGGGTACTaGTCAGCTCCATCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHGVTLIFSRSFPLHQELPVKGY*SAPSSP Trigger: AGGAGAAGATGGAGCTGACCAGTACCCCTTCACAGG...AAGCTCTTGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CCA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTCCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSPRKTDSISPSIGTPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CCA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCCCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSPNSPRKTDSISPSIGPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTAAACGCTTAAGTAGCCTTAGAAGACTGAGGAGACGATCAAGTACATTCGCCTCTTGTTCGTTCTaGCTCTTCTCCAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLKRLSSLRRLRRRSSTFASCSF*LFSRRC Trigger: ACAGCGCCTGGAGAAGAGCCAGAACGAACAAGAGGC...GAATGTACTTGATCGTCTCCTCAGTCTTCTAAGGCTACTTAAGCGTTTAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGCTTTTCTGCGAATTTTaGAAGATGATGCTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAQTVLGRQTASLHLLALLFCEF*KMMLRG Trigger: TCCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAG...CAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR TCA 90 bp | ACAACAAAGACAGGGCTTCCATTACTAAGTTTTTGCACAAAACACAGCTGTAGACTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTKTGLPLLSFCTKHSCRLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...TCTACAGCTGTGTTTTGTGCAAAAACTTAGTAATGGAAGCCCTGTCTTTGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTTGCACAGCGTTTGCTTaGCTACTAACACACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHSLTPELGTQAYTKKNPCTAFA*LLTHSS Trigger: GCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCA...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | AGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTGCACAGCGTTTGCTTaGCTACTAACACACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRKTDSISPSIGTEISLCTAFA*LLTHSS Trigger: GCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCA...GAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAAGTGACTTTTGAAAGATaGTGCTCAGAGGAGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQTVLGRQTASLHLLALKVTFER*CSEENP Trigger: GGGATTCTCCTCTGAGCATCATCTTTCAAAAGTCAC...TTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WYGAQTVLGRQTASLHLLIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YGAQTVLGRQTASLHLLAIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCATTGTACAGCAAGATACACGATTCTGATGCAGTTCCTACTCGCAGATCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SQALYSKIHDSDAVPTRRSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...TCTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTGCTGTACAATGCCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNSPRKTDSISPSIGTEMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...TTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTAGCTGTTGCTTCCACTaGTTCACATTGGCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGRQTASLHLLALKFHSSCCFH*FTLAVD Trigger: GTCCACTGCCAATGTGAAGCAGTGGAAGCAACAGCT...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | CCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTGTCTCTTCCAGTTCCTaGACTGTCTGGTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRKTDSISPSIGTEISLSVSSSS*TVWFSS Trigger: AGAGCTGAACCAGACAGTGCAGGAACTGGAAGAGAC...AGAGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTATCCCCAGCACTATGTaGAAATGGCAATGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVRSPNSPRKTDSISPSIIPSTM*KWQCIL Trigger: CAGAATGCATTGCCATTTCCACATAGTGCTGGGGAT...AATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | AGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACATTTTTCCAAAGTTCTAAACTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLGISEARSMTFFQSSKLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...TTTAGAACTTTGGAAAAATGTCATGGACCTTGCTTCACTAATACCCAGAAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACCCTCCCAGTGTTTGCTaGTTGCTGAACTATGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVLGRQTASLHLLALKFHPPSVC*LLNYVE Trigger: TTCCACATAGTTCAGCAATCAGCAAACACTGGGAGG...GTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTTGCACAGCGTTTGCTTaGCTACTAACACACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVLGRQTASLHLLALKFCTAFA*LLTHSS Trigger: GCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCA...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | GTTATAATAACTTATACACAGATGGGACTGACCCCTGCTCTCCTCCTGGGTCACATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VIITYTQMGLTPALLLGHIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...GTGACCCAGGAGGAGAGCAGGGGTCAGTCCCATCTGTGTATAAGTTATTATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTTCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PRKTDSISPSIGTEISLSSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...AGAGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCAAGCTCCATCTTCTCCTaGGACTTCTCCTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSPRKTDSISPSIGTEISSSIFS*DFSFAS Trigger: GCTTGCAAAGGAGAAGTCGCAGGAGAAGATGGAGCT...TGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTTCTAGGTCAGACAGCTaGCCCTCCAGGTCTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PRKTDSISPSIGTEISLSSRSDS*PSRSLF Trigger: AAATAAAGACCTGGAGGGGCAGCTGTCTGACCTAGA...AGAGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTGTGTCTTCAGGTTACTaGGGAAAGCCTCTTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGRQTASLHLLALKFHSVSSGY*GKPLVR Trigger: ACGAACAAGAGGCTTTCCGCAGTAACCTGAAGACAC...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCTTTCAACTTCCTATGTaGAAATGGCAATGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRSPNSPRKTDSISPSIGFQLPM*KWQCIL Trigger: CAGAATGCATTGCCATTTCCACATAGGAAGTTGAAA...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109495.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGTTGGCTCAGTGGTTAAGAGCACTAGTTGCTCCTGTAAAGGACTTAGCTCTTTTCTGCGAATTTTaGAAGATGATGCTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GELAQWLRALVAPVKDLALFCEF*KMMLRG Trigger: TCCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAG...AGCTAAGTCCTTTACAGGAGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR TCA 90 bp | ACATCTCATGCAGCCAAATTATTCTTTATACAAGGATGCTCACTAATGAACCAACTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSHAAKLFFIQGCSLMNQLSPWL*VLCHIG Trigger: CCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAG...TTGGTTCATTAGTGAGCATCCTTGTATAAAGAATAATTTGGCTGCATGAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCTTCTCACACAGAAGTCAAGCAGGTGTCTTCTTTTAAGAAGAACTATGGATACAGTAACTGCATaGTTGCTGGTGGGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLTQKSSRCLLLRRTMDTVTA*LLVGTQ Trigger: CTGGGTACCCACCAGCAAGCATGCAGTTACTGTATC...CATAGTTCTTCTTAAAAGAAGACACCTGCTTGACTTCTGTGTGAGAAGAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACATTTTTCGATACAGTAACTGCATaGTTGCTGGTGGGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QELFSLLGISEARSMTFFDTVTA*LLVGTQ Trigger: CTGGGTACCCACCAGCAAGCATGCAGTTACTGTATC...GAAAAATGTCATGGACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAAGATCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSRSYSDFQQIFPPSSRSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...TCTTGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCTTCTCACACAGAAGTCAAGCAGGTGTCTTCTTTTAAGAAGAACTATGAGCTCCATCTTCTCCTaGGACTTCTCCTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLTQKSSRCLLLRRTMSSIFS*DFSFAS Trigger: GCTTGCAAAGGAGAAGTCGCAGGAGAAGATGGAGCT...CATAGTTCTTCTTAAAAGAAGACACCTGCTTGACTTCTGTGTGAGAAGAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | TATTCATATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTTCAATAGCTCCATCTTCTCCTaGGACTTCTCCTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSYHTPFTRQRGTADHFNSSIFS*DFSFAS Trigger: GCTTGCAAAGGAGAAGTCGCAGGAGAAGATGGAGCT...ATTGAAATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGATATGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLGRQTASLHLLALKFHMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...GTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTTCTAGGTCAGACAGCTaGCCCTCCAGGTCTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QTVLGRQTASLHLLALKFSRSDS*PSRSLF Trigger: AAATAAAGACCTGGAGGGGCAGCTGTCTGACCTAGA...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTGTGTCTTCAGGTTACTaGGGAAAGCCTCTTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVLGRQTASLHLLALKFVSSGY*GKPLVR Trigger: ACGAACAAGAGGCTTTCCGCAGTAACCTGAAGACAC...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGGATTAATTGGTAATGGCCCTTTCTCAGCAGCGAAAAATTATCCTGAGGCTGCCTTTACAAAGTaGACGCCTATTGTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WQGLIGNGPFSAAKNYPEAAFTK*TPIVMV Trigger: CACCATCACAATAGGCGTGCACTTTGTAAAGGCAGC...CTCAGGATAATTTTTCGCTGCTGAGAAAGGGCCATTACCAATTAATCCTTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGGCATTGTACAGCAAGATACACGATTCTGATGCAGTTCCTACTCGCAGACCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQALYSKIHDSDAVPTRRPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...TCTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTGCTGTACAATGCCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCTAGCTTAGCTCTTCTTCTCACACAGAAGTCAAGCAGGTGTCTTCTTCCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DGSSLALLLTQKSSRCLLPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...AAGAAGACACCTGCTTGACTTCTGTGTGAGAAGAAGAGCTAAGCTAGAGCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTGAGTCCCTCTGTTCTTaGAGTTCTCTGGCATTATCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVLGRQTASLHLLALKFESLCS*SSLALS Trigger: CGATAATGCCAGAGAACTCCAAGAACAGAGGGACTC...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAATGTGCCTCACAACATCCCTGTGAGGTAGGGAGGTGGATTGGTGACAAACTTTTCTGCGAATTTTaGAAGATGATGCTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKCASQHPCEVGRWIGDKLFCEF*KMMLRG Trigger: TCCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAG...TTTGTCACCAATCCACCTCCCTACCTCACAGGGATGTTGTGAGGCACATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTACTTCCTGTAGTTTCTaGGTCAAAGAGTCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVLGRQTASLHLLALKFTSCSF*VKESLC Trigger: ACAGAGGGACTCTTTGACTCAGAAACTACAGGAAGT...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | AACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCAACTTCCTGTAGTTTCTaGGTCAAAGAGTCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSPRKTDSISPSIGTEISTSCSF*VKESLC Trigger: ACAGAGGGACTCTTTGACTCAGAAACTACAGGAAGT...TGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | AACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACAGCTCAGTGACTTTTaGAAGATGATGCTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSPRKTDSISPSIGTEISQLSDF*KMMLRG Trigger: TCCTCTGAGCATCATCTTTCAAAAGTCACTGAGCTG...TGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCATATAATCTTCACTGTGTTGAACAAAAGAGGAGAAGGGACCCAGACATTGATACAGTAACTGCATaGTTGCTGGTGGGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAYNLHCVEQKRRRDPDIDTVTA*LLVGTQ Trigger: CTGGGTACCCACCAGCAAGCATGCAGTTACTGTATC...AATGTCTGGGTCCCTTCTCCTCTTTTGTTCAACACAGTGAAGATTATATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGATCTTTCCCCCTTCATCAAGAGCTTTTCAGTCTTCTGGGTATTAGTGATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SADLSPFIKSFSVFWVLVIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...CACTAATACCCAGAAGACTGAAAAGCTCTTGATGAAGGGGGAAAGATCTGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | CATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAAGAGCTTATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HHGVTLIFSRSFPLHQELIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...AAGCTCTTGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAATCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FLHHGVTLIFSRSFPLHQSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...TTGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATGAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTCATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSRSYSDFQQIFPPSSMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...TGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATGAAGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR GCA 90 bp | ACAACAAAGACAGGGCTTCCATTACTAAGTTTTTGCACAAAACACAGCTGTAGAGTCTCTTCCAGTTCCTaGACTGTCTGGTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTKTGLPLLSFCTKHSCRVSSSS*TVWFSS Trigger: AGAGCTGAACCAGACAGTGCAGGAACTGGAAGAGAC...TCTACAGCTGTGTTTTGTGCAAAAACTTAGTAATGGAAGCCCTGTCTTTGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTCCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHSLTPELGTQAYTKKNPPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | ACTGTCGGATCCTTGGGTAGTTTTTCAAAACAGAAAGGACACATTGAGACTGGAATCCCCAGCACTATGTaGAAATGGCAATGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVGSLGSFSKQKGHIETGIPSTM*KWQCIL Trigger: CAGAATGCATTGCCATTTCCACATAGTGCTGGGGAT...TCCAGTCTCAATGTGTCCTTTCTGTTTTGAAAAACTACCCAAGGATCCGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGATCTTTCCCCCTTCATCAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAGTTGGCTGTCTATGTaGAAATGGCAATGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SADLSPFIKSFSVFWVLVSWLSM*KWQCIL Trigger: CAGAATGCATTGCCATTTCCACATAGACAGCCAACT...CACTAATACCCAGAAGACTGAAAAGCTCTTGATGAAGGGGGAAAGATCTGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109493.9 |
||
| 3UTR CAA 72 bp | ACTGTGTTGAACAAAAGAGGAGAAGGGACCCAGACATaGTTAATTCTCCCATTGGCTAATATCAGGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVLNKRGEGTQT*LILPLANIRGK Trigger: TTTCCCCCTGATATTAGCCAATGGGAGAATTAACAATGTCTGGGTCCCTTCTCCTCTTTTGTTCAACACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR TCA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTTTTCTGCGAATTTTaGAAGATGATGCTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLGRQTASLHLLALKFHSLFCEF*KMMLRG Trigger: TCCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAG...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGGATTAATTGGTAATGGCCCTTTCTCAGCAGCGAAAAATTATCCTGAGATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WQGLIGNGPFSAAKNYPEIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...CTCAGGATAATTTTTCGCTGCTGAGAAAGGGCCATTACCAATTAATCCTTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | AACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCAATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NSPRKTDSISPSIGTEISIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...TGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR GCA 90 bp | AATACACTGTCGGATCCTTGGGTAGTTTTTCAAAACAGAAAGGACACATTGAGATCCATAAACAGTGTTTaGCCGGCTATCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NTLSDPWVVFQNRKDTLRSINSV*PAISPL Trigger: CAATGGGCTGATAGCCGGGCAAACACTGTTTATGGA...TCTCAATGTGTCCTTTCTGTTTTGAAAAACTACCCAAGGATCCGACAGTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR GCA 90 bp | AGATATATTCATATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYIHIIPPSQDREGQQIIMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...AATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGATATGAATATATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCCTTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTGGTCTAGTATGTCCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSLFHSLLRKIFHAGLVCPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...ACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAAGGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR GCA 90 bp | GATATATTCATATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTTATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DIFISYPLHKTERDSRSFIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...AAATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGATATGAATATATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CCA 90 bp | GATATATTCATATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTTCCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DIFISYPLHKTERDSRSFPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...AAATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGATATGAATATATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CCA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTTGCATTCCAGTAGCTTaGCCAAATTATCTCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VHSLTPELGTQAYTKKNPCIPVA*PNYLVI Trigger: AATTACGAGATAATTTGGCCAAGCTACTGGAATGCA...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CCA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTTGCATTCCAGTAGCTTaGCCAAATTATCTCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VLGRQTASLHLLALKFHSCIPVA*PNYLVI Trigger: AATTACGAGATAATTTGGCCAAGCTACTGGAATGCA...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTTGCATTCCAGTAGCTTaGCCAAATTATCTCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: QTVLGRQTASLHLLALKFCIPVA*PNYLVI Trigger: AATTACGAGATAATTTGGCCAAGCTACTGGAATGCA...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR TCA 90 bp | ACAACAAAGACAGGGCTTCCATTACTAAGTTTTTGCACAAAACACAGCTGTAGACTTTTCTGCGAATTTTaGAAGATGATGCTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTKTGLPLLSFCTKHSCRLFCEF*KMMLRG Trigger: TCCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAG...TCTACAGCTGTGTTTTGTGCAAAAACTTAGTAATGGAAGCCCTGTCTTTGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR GCA 90 bp | TGCAGTTGCATCTCAACATGCAATAATAACACATTAGTAGAGAACAAGGTGAGTATAAGATACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSCISTCNNNTLVENKVSIRYSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTATCTTAT...ACTCACCTTGTTCTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| CDS-3UTR GCA 90 bp | ACATCTCATGCAGCCAAATTATTCTTTATACAAGGATGCTCACTAATGAACCAAATGTGGAAATGGCAATaGATTCTGAGTTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSHAAKLFFIQGCSLMNQMWKWQ*ILSWLS Trigger: GCTGAGCCAACTCAGAATGCATTGCCATTTCCACAT...TTGGTTCATTAGTGAGCATCCTTGTATAAAGAATAATTTGGCTGCATGAGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
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| 3UTR CAA 72 bp | TTCTACACAAATGACACCAGGAAGCAAACAATTACCTaGAACGAGAGAGGAAACCTTTTTCCTACACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FYTNDTRKQTIT*NERGNLFPTQT Trigger: TGTTTGTGTAGGAAAAAGGTTTCCTCTCTCGTTCAAGGTAATTGTTTGCTTCCTGGTGTCATTTGTGTAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CCA 90 bp | ACATCTCATGCAGCCAAATTATTCTTTATACAAGGATGCTCACTAATGAACCAACCCATTGATACTTTCTaGTGTCAAAGGAGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSHAAKLFFIQGCSLMNQPIDTF*CQRRLK Trigger: CTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGG...TTGGTTCATTAGTGAGCATCCTTGTATAAAGAATAATTTGGCTGCATGAGATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
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| CDS-3UTR CCA 90 bp | ACAACAAAGACAGGGCTTCCATTACTAAGTTTTTGCACAAAACACAGCTGTAGATGCATTCCAGTAGCTTaGCCAAATTATCTCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TTKTGLPLLSFCTKHSCRCIPVA*PNYLVI Trigger: AATTACGAGATAATTTGGCCAAGCTACTGGAATGCA...TCTACAGCTGTGTTTTGTGCAAAAACTTAGTAATGGAAGCCCTGTCTTTGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| CDS-3UTR CCA 90 bp | CAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACATTTTTCTTGTGTGACATGAGTTaGTCTTTTTACACTGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: QELFSLLGISEARSMTFFLCDMS*SFYTVM Trigger: CATAACAGTGTAAAAAGACCAACTCATGTCACACAA...GAAAAATGTCATGGACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109493.9 |
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| 3UTR CAA 72 bp | CTCTTGGAGAAGAGTCTGTTGAAGGTATCTCCTGTTTaGAAATGCCTAGTTAACAGTTCAAAATATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLEKSLLKVSPV*KCLVNSSKYSL Trigger: AAGGCTATATTTTGAACTGTTAACTAGGCATTTCAAAACAGGAGATACCTTCAACAGACTCTTCTCCAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| CDS GCA 90 bp | CGCTTGTGCAGCCGCTCTGCTTCCTCCTGGTACGCAGCAAGCTGTTaGTTCCACTGCTTCACATTGGCAGTGGACTCCAGCAGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLCSRSASSWYAASC*FHCFTLAVDSSRAA Trigger: TGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGAAGCAACAGCTTGCTGCGTACCAGGAGGAAGCAGAGCGGCTGCACAAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CCA 90 bp | CACTCCAGCTCAGTGACCCGCTTGTGCAGCCGCTCTGCTTCCTCCTaGTACGCAGCAAGCTGTTGCTTCCACTGCTTCACATTGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSSVTRLCSRSASS*YAASCCFHCFTLAV Trigger: CACTGCCAATGTGAAGCAGTGGAAGCAACAGCTTGCTGCGTACCAGGAGGAAGCAGAGCGGCTGCACAAGCGGGTCACTGAGCTGGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
||
| CDS GCA 90 bp | AGCCGCTCTGCTTCCTCCTGGTACGCAGCAAGCTGTTGCTTCCACTaGTTCACATTGGCAGTGGACTCCAGCAGGGCTGCAGTGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSASSWYAASCCFH*FTLAVDSSRAAVSL Trigger: CAAACTCACTGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGAAGCAACAGCTTGCTGCGTACCAGGAGGAAGCAGAGCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS GCA 90 bp | ACTACTAACACACTCCAGCTCAGTGACCCGCTTGTGCAGCCGCTCTaGTTCCTCCTGGTACGCAGCAAGCTGTTGCTTCCACTGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TTNTLQLSDPLVQPL*FLLVRSKLLLPLLH Trigger: GTGAAGCAGTGGAAGCAACAGCTTGCTGCGTACCAGGAGGAAGCAGAGCGGCTGCACAAGCGGGTCACTGAGCTGGAGTGTGTTAGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS TCA 90 bp | ACTGTCTGGTTCAGCTCTGTCTTGTGGCTGTGCACAGCGTTTGCTTaGCTACTAACACACTCCAGCTCAGTGACCCGCTTGTGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TVWFSSVLWLCTAFA*LLTHSSSVTRLCSR Trigger: GCGGCTGCACAAGCGGGTCACTGAGCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAACCAGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS TCA 90 bp | GTAGCTAGCTCAGCCTCCCAGTGTTTGCTGATTGCTGAACTAGCATaGGAGAGGGCCTGGGTTCGATCCCCAGCACTATGTGGAAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VASSASQCLLIAELA*ERAWVRSPALCGNG Trigger: GCCATTTCCACATAGTGCTGGGGATCGAACCCAGGCCCTCTCTCATGCTAGTTCAGCAATCAGCAAACACTGGGAGGCTGAGCTAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080127.12 |
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| CDS GCA 90 bp | CTGCACTGTCTGGTTCAGCTCTGTCTTGTGGCTGTGCACAGCGTTTaGTTGACTACTAACACACTCCAGCTCAGTGACCCGCTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHCLVQLCLVAVHSV*LTTNTLQLSDPLVQ Trigger: CTGCACAAGCGGGTCACTGAGCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAACCAGACAGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS-3UTR CAA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTCCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPNSPRKTDSISPSIGTPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
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| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLAPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
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| CDS-3UTR CAA 90 bp | AAAGCACCAGCAGCTGCCATCTCAGGTCACATGACTGACTGGGTCCCTATCCTTGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KAPAAAISGHMTDWVPILVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...AAGGATAGGGACCCAGTCAGTCATGTGACCTGAGATGGCAGCTGCTGGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| CDS-3UTR CAA 90 bp | AGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAACCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPNSPRKTDSISPSIGTEPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...TTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
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| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCATTCCACTGCTTCACATaGGCAGTGGACTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLAFHCFT*AVDSSR Trigger: CCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGAA...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| CDS-3UTR CAA 90 bp | CCAGTTTTAGTTAATCTGACACCCTCTTCTGGATCCTGTGGGCACCAGGCATCGCCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: PVLVNLTPSSGSCGHQASPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...CGATGCCTGGTGCCCACAGGATCCAGAAGAGGGTGTCAGATTAACTAAAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| CDS-3UTR CAA 90 bp | GGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GAQTVLGRQTASLHLLALVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...CAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
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| CDS-3UTR CAA 90 bp | GATGGCTCTAGCTTAGCTCTTCTTCTCACACAGAAGTCAAGCAGGTGTCTTCTTCCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DGSSLALLLTQKSSRCLLPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...AAGAAGACACCTGCTTGACTTCTGTGTGAGAAGAAGAGCTAAGCTAGAGCCATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
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| CDS-3UTR CAA 90 bp | GTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCGTGAGTTTGGCATTGTaGCCTTTGAGGGTAGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRSPNSPRKTDSISPSIGVSLAL*PLRVAS Trigger: GCTAGCTACCCTCAAAGGCAACAATGCCAAACTCAC...GCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| CDS-3UTR CAA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGCAGTGAGTTTGGCATaGTTGCCTTTGAGGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPNSPRKTDSISPSIGTAVSLA*LPLRVA Trigger: AGCTACCCTCAAAGGCAACAATGCCAAACTCACTGC...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAAGGGCTGCAGTGAGTTaGGCATTGTTGCCTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLARAAVS*ALLPLR Trigger: CCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCT...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| CDS-3UTR CAA 90 bp | TTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTTTCCACTGCTTCACATaGGCAGTGGACTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRSPNSPRKTDSISPSIFHCFT*AVDSSR Trigger: CCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGAA...AATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
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| CDS-3UTR CAA 90 bp | TCTTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTAACTGCGGAAAGCCTCTaGTTCGTTCTGGCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWYGAQTVLGRQTASLHLTAESL*FVLALL Trigger: GAGAAGAGCCAGAACGAACAAGAGGCTTTCCGCAGT...TAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
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| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAACTGCGGAAAGCCTCTaGTTCGTTCTGGCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLATAESL*FVLALL Trigger: GAGAAGAGCCAGAACGAACAAGAGGCTTTCCGCAGT...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
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| CDS-3UTR CAA 90 bp | CGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTTCAGCCTCCCAGTGTTaGCTGATTGCTGAACTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPNSPRKTDSISPSIGTSASQC*LIAELA Trigger: TGCTAGTTCAGCAATCAGCAAACACTGGGAGGCTGA...AGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080127.12 |
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| CDS TCA 90 bp | CTCTCATCGTCTGTCCCATTGATACTTTCTGGTGTCAAAGGAGACTaGAGATCTCCTCCTGCTGATTCCTGTGAAGGGGTACTGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSVPLILSGVKGD*RSPPADSCEGVLVS Trigger: GCTGACCAGTACCCCTTCACAGGAATCAGCAGGAGGAGATCTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGGACAGACGATGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000102752.10 ENSMUST00000109492.9 ENSMUST00000109493.9 ENSMUST00000109494.8 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGTTGGCTCAGTGGTTAAGAGCACTAGTTGCTCCTGTAAAGGACTTAGCTACAGTAACTGCATGCTaGCTGGTGGGTACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GELAQWLRALVAPVKDLATVTAC*LVGTQF Trigger: GAACTGGGTACCCACCAGCAAGCATGCAGTTACTGT...AGCTAAGTCCTTTACAGGAGCAACTAGTGCTCTTAACCACTGAGCCAACTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| CDS-3UTR CAA 90 bp | GATCCTTGGGTAGTTTTTCAAAACAGAAAGGACACATTGAGACTGGAGGCGAAGCCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DPWVVFQNRKDTLRLEAKPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...CTTCGCCTCCAGTCTCAATGTGTCCTTTCTGTTTTGAAAAACTACCCAAGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGRQTASLHLLALKFHSPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAATTTCTAGGAGTGTCTTCAGGTTACTGCGGAAAGCCTCTTGTTCGTTCTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEFLGVSSGYCGKPLVRSELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...AGAACGAACAAGAGGCTTTCCGCAGTAACCTGAAGACACTCCTAGAAATTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAATGTGCCTCACAACATCCCTGTGAGGTAGGGAGGTGGATTGGTGACAAAGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKCASQHPCEVGRWIGDKAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...TTTGTCACCAATCCACCTCCCTACCTCACAGGGATGTTGTGAGGCACATTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | GATGGCTCTAGCTTAGCTCTTCTTCTCACACAGAAGTCAAGCAGGTGTCTTCTTGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGSSLALLLTQKSSRCLLAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...AAGAAGACACCTGCTTGACTTCTGTGTGAGAAGAAGAGCTAAGCTAGAGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAGCAGTGAGTTTGGCATaGTTGCCTTTGAGGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLAAVSLA*LPLRVA Trigger: AGCTACCCTCAAAGGCAACAATGCCAAACTCACTGC...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAGAGTCCCTCTGTTCTaGGAGTTCTCTGGCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: GAQTVLGRQTASLHLLALRVPLF*EFSGII Trigger: GATAATGCCAGAGAACTCCAAGAACAGAGGGACTCT...CAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS TCA 90 bp | CTGAGTTCTGTGTCACATCGGGTGTTCTCTCATCGTCTGTCCCATTaGTACTTTCTGGTGTCAAAGGAGACTGAAGATCTCCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSVSHRVFSHRLSH*YFLVSKETEDLLLL Trigger: CAGCAGGAGGAGATCTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGGACAGACGATGAGAGAACACCCGATGTGACACAGAACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000102752.10 ENSMUST00000109492.9 ENSMUST00000109493.9 ENSMUST00000109494.8 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SPNSPRKTDSISPSIGTEVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...TTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCCTTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTGGTCTAGTATGTCCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSLFHSLLRKIFHAGLVCPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...ACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAAGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CAA 90 bp | CCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PNSPRKTDSISPSIGTEIELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...AATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VHSLTPELGTQAYTKKNPAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PNSPRKTDSISPSIGTEIAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...AATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | GATCCTTGGGTAGTTTTTCAAAACAGAAAGGACACATTGAGACTGGAGGCGAAGGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DPWVVFQNRKDTLRLEAKAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...CTTCGCCTCCAGTCTCAATGTGTCCTTTCTGTTTTGAAAAACTACCCAAGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPRKTDSISPSIGTEISLAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...GAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGTGAGTTTGGCATTGTaGCCTTTGAGGGTAGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVRSPNSPRKTDSISPSIVSLAL*PLRVAS Trigger: GCTAGCTACCCTCAAAGGCAACAATGCCAAACTCAC...AATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGAGAGTCCCTCTGTTCTaGGAGTTCTCTGGCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: WYGAQTVLGRQTASLHLLRVPLF*EFSGII Trigger: GATAATGCCAGAGAACTCCAAGAACAGAGGGACTCT...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | ATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTTCAATGACTGTCTTAGCAGTAAGGCACTaGCCTAGCATGAGAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IIPPSQDREGQQIISMTVLAVRH*PSMREG Trigger: GCCCTCTCTCATGCTAGGCAAGTGCCTTACTGCTAA...GACAGTCATTGAAATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAATTTCTAGGAGTGTCTTCAGGTTACTGCGGAAAGCCTCTTGTTCGTTCTCCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: PEFLGVSSGYCGKPLVRSPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...AGAACGAACAAGAGGCTTTCCGCAGTAACCTGAAGACACTCCTAGAAATTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCTTCTCACACAGAAGTCAAGCAGGTGTCTTCTTTTAAGAAGAACTATGCCTGCGACTTCTCCTTaGCAAGCCGAGCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLLTQKSSRCLLLRRTMPATSP*QAEQLP Trigger: AGGAAGCTGCTCGGCTTGCAAAGGAGAAGTCGCAGG...CATAGTTCTTCTTAAAAGAAGACACCTGCTTGACTTCTGTGTGAGAAGAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | CCAGTTTTAGTTAATCTGACACCCTCTTCTGGATCCTGTGGGCACCAGGCATCGTCATCGTCTGTCCCATaGATACTTTCTGGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLVNLTPSSGSCGHQASSSSVP*ILSGVK Trigger: TTTGACACCAGAAAGTATCAATGGGACAGACGATGA...CGATGCCTGGTGCCCACAGGATCCAGAAGAGGGTGTCAGATTAACTAAAACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CAA 90 bp | AACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCAGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSPRKTDSISPSIGTEISELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...TGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTVLGRQTASLHLLALKFELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGGATTAATTGGTAATGGCCCTTTCTCAGCAGCGAAAAATTATCCTGAGGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WQGLIGNGPFSAAKNYPEAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...CTCAGGATAATTTTTCGCTGCTGAGAAAGGGCCATTACCAATTAATCCTTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTTTGGCATTGTTGCCTTaGAGGGTAGCTAGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRKTDSISPSIGTEISLSLALLP*RVASSA Trigger: GGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAA...AGAGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCTACTCGCAGAGCAGGCAGCACTTGGCTTACTTTTAAATTGTTTTGTGTTGGCATTGTTGCCTTaGAGGGTAGCTAGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QFLLAEQAALGLLLNCFVLALLP*RVASSA Trigger: GGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAA...CACAAAACAATTTAAAAGTAAGCCAAGTGCTGCCTGCTCTGCGAGTAGGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTAGGGCTGCAGTGAGTTaGGCATTGTTGCCTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHSLTPELGTQAYTKKNPRAAVS*ALLPLR Trigger: CCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCT...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTACAGTAACTGCATGCTaGCTGGTGGGTACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVLGRQTASLHLLALKFTVTAC*LVGTQF Trigger: GAACTGGGTACCCACCAGCAAGCATGCAGTTACTGT...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: VLGRQTASLHLLALKFHSPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTCCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: VHSLTPELGTQAYTKKNPPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VHSLTPELGTQAYTKKNPVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PNSPRKTDSISPSIGTEIVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...AATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCATCATCGTCTGTCCCATaGATACTTTCTGGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLASSSVP*ILSGVK Trigger: TTTGACACCAGAAAGTATCAATGGGACAGACGATGA...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGTCATCGTCTGTCCCATaGATACTTTCTGGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WYGAQTVLGRQTASLHLLSSSVP*ILSGVK Trigger: TTTGACACCAGAAAGTATCAATGGGACAGACGATGA...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | AGATATATTCATATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RYIHIIPPSQDREGQQIIELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...AATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGATATGAATATATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCATTGGCATTGTTGCCTTaGAGGGTAGCTAGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSPRKTDSISPSIGTEISLALLP*RVASSA Trigger: GGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAA...TGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCTACTCGCAGAGCAGGCAGCACTTGGCTTACTTTTAAATTGTTTTGTGGTGAGTTTGGCATTGTaGCCTTTGAGGGTAGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QFLLAEQAALGLLLNCFVVSLAL*PLRVAS Trigger: GCTAGCTACCCTCAAAGGCAACAATGCCAAACTCAC...CACAAAACAATTTAAAAGTAAGCCAAGTGCTGCCTGCTCTGCGAGTAGGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTGCAGTGAGTTTGGCATaGTTGCCTTTGAGGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGRQTASLHLLALKFHSAVSLA*LPLRVA Trigger: AGCTACCCTCAAAGGCAACAATGCCAAACTCACTGC...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTAGGGCTGCAGTGAGTTaGGCATTGTTGCCTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTVLGRQTASLHLLALKFRAAVS*ALLPLR Trigger: CCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCT...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTACTGCGGAAAGCCTCTaGTTCGTTCTGGCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVLGRQTASLHLLALKFTAESL*FVLALL Trigger: GAGAAGAGCCAGAACGAACAAGAGGCTTTCCGCAGT...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | TGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGCTGCATTCCAGTAGCTaGGCCAAATTATCTCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: WYGAQTVLGRQTASLHLLLHSSS*AKLSRN Trigger: ATTACGAGATAATTTGGCCAAGCTACTGGAATGCAG...CAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: QTVLGRQTASLHLLALKFPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGGATTAATTGGTAATGGCCCTTTCTCAGCAGCGAAAAATTATCCTGAGGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: WQGLIGNGPFSAAKNYPEVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...CTCAGGATAATTTTTCGCTGCTGAGAAAGGGCCATTACCAATTAATCCTTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CTTCATCAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACAGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LHQELFSLLGISEARSMTVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...TGTCATGGACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCTCTTGATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCAACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLATFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTGGTCTAGTATGTTTAATCGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFHSLLRKIFHAGLVCLIELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...GATTAAACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CAA 90 bp | AAAGCATATAATCTTCACTGTGTTGAACAAAAGAGGAGAAGGGACCCAGACATTTTCCACTGCTTCACATaGGCAGTGGACTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAYNLHCVEQKRRRDPDIFHCFT*AVDSSR Trigger: CCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGAA...AATGTCTGGGTCCCTTCTCCTCTTTTGTTCAACACAGTGAAGATTATATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | AAAGCATATAATCTTCACTGTGTTGAACAAAAGAGGAGAAGGGACCCAGACATTACAGTAACTGCATGCTaGCTGGTGGGTACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAYNLHCVEQKRRRDPDITVTAC*LVGTQF Trigger: GAACTGGGTACCCACCAGCAAGCATGCAGTTACTGT...AATGTCTGGGTCCCTTCTCCTCTTTTGTTCAACACAGTGAAGATTATATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | TACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCATGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YGAQTVLGRQTASLHLLAWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...TGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGGTACGGAGCCCAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SWYGAQTVLGRQTASLHLWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...TAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTGGGCTCCGTACCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACATTTTTCCCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: QELFSLLGISEARSMTFFPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...GAAAAATGTCATGGACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TATTCATATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTTCAATCCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: YSYHTPFTRQRGTADHFNPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...ATTGAAATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGATATGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACATTTTTCGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QELFSLLGISEARSMTFFVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...GAAAAATGTCATGGACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | AAAATCCATGAACCAGCTCTATTTAGAAGTCCAAGAAAACCAGCCACTTGTTTTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KIHEPALFRSPRKPATCFELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...AAAACAAGTGGCTGGTTTTCTTGGACTTCTAAATAGAGCTGGTTCATGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGTTGCATCTCAACATGCAATAATAACACATTAGTAGAGAACAAGGTGAGTGCAATGCATTCTGAGTaGGCTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSCISTCNNNTLVENKVSAMHSE*AQPLAL Trigger: CAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGC...ACTCACCTTGTTCTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTTAAACGCTTAAGTAGCCTTAGAAGACTGAGGAGACGATCAAGTACATTCTCAGCCTCCCAGTGTTaGCTGATTGCTGAACTATGT | + |
|
Preference number: 5 (lower is better) Translates to: SLKRLSSLRRLRRRSSTFSASQC*LIAELC Trigger: ACATAGTTCAGCAATCAGCAAACACTGGGAGGCTGA...GAATGTACTTGATCGTCTCCTCAGTCTTCTAAGGCTACTTAAGCGTTTAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTAGAGTCCCTCTGTTCTaGGAGTTCTCTGGCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: QTVLGRQTASLHLLALKFRVPLF*EFSGII Trigger: GATAATGCCAGAGAACTCCAAGAACAGAGGGACTCT...AAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCATTGTACAGCAAGATACACGATTCTGATGCAGTTCCTACTCGCAGACTGCATTCCAGTAGCTaGGCCAAATTATCTCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQALYSKIHDSDAVPTRRLHSSS*AKLSRN Trigger: ATTACGAGATAATTTGGCCAAGCTACTGGAATGCAG...TCTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTGCTGTACAATGCCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | AAAATCCATGAACCAGCTCTATTTAGAAGTCCAAGAAAACCAGCCACTTGTTTTACAGTAACTGCATGCTaGCTGGTGGGTACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KIHEPALFRSPRKPATCFTVTAC*LVGTQF Trigger: GAACTGGGTACCCACCAGCAAGCATGCAGTTACTGT...AAAACAAGTGGCTGGTTTTCTTGGACTTCTAAATAGAGCTGGTTCATGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATCAATGCTAACAGGCTCGTGCTTGGTACCCTGTCTTCTGTGAAAACTTGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SAINANRLVLGTLSSVKTWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...AGTTTTCACAGAAGACAGGGTACCAAGCACGAGCCTGTTAGCATTGATGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CAA 90 bp | ACAACAAAGACAGGGCTTCCATTACTAAGTTTTTGCACAAAACACAGCTGTAGACCGGCTATCAGCCCATaGGCCAAACTTTTGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TTKTGLPLLSFCTKHSCRPAISP*AKLLRC Trigger: ACATCTCAAAAGTTTGGCCAATGGGCTGATAGCCGG...TCTACAGCTGTGTTTTGTGCAAAAACTTAGTAATGGAAGCCCTGTCTTTGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | AAATACACTGTCGGATCCTTGGGTAGTTTTTCAAAACAGAAAGGACACATTGAGGTCCATAAACAGTGTTaGCCCGGCTATCAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KYTVGSLGSFSKQKGHIEVHKQC*PGYQPI Trigger: AATGGGCTGATAGCCGGGCAAACACTGTTTATGGAC...CTCAATGTGTCCTTTCTGTTTTGAAAAACTACCCAAGGATCCGACAGTGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCATTGTACAGCAAGATACACGATTCTGATGCAGTTCCTACTCGCAGAACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQALYSKIHDSDAVPTRRTFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...TCTGCGAGTAGGAACTGCATCAGAATCGTGTATCTTGCTGTACAATGCCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | ACATCTCATGCAGCCAAATTATTCTTTATACAAGGATGCTCACTAATGAACCAAGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSHAAKLFFIQGCSLMNQELAQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTC...TTGGTTCATTAGTGAGCATCCTTGTATAAAGAATAATTTGGCTGCATGAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | GTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTCTCTGCATTCCAGTAGCTaGGCCAAATTATCTCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLGRQTASLHLLALKFHSLHSSS*AKLSRN Trigger: ATTACGAGATAATTTGGCCAAGCTACTGGAATGCAG...AGAGTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | ACATCTCATGCAGCCAAATTATTCTTTATACAAGGATGCTCACTAATGAACCAAACAGTAACTGCATGCTaGCTGGTGGGTACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSHAAKLFFIQGCSLMNQTVTAC*LVGTQF Trigger: GAACTGGGTACCCACCAGCAAGCATGCAGTTACTGT...TTGGTTCATTAGTGAGCATCCTTGTATAAAGAATAATTTGGCTGCATGAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTTAAACGCTTAAGTAGCCTTAGAAGACTGAGGAGACGATCAAGTACATTCTCATCGTCTGTCCCATaGATACTTTCTGGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLKRLSSLRRLRRRSSTFSSSVP*ILSGVK Trigger: TTTGACACCAGAAAGTATCAATGGGACAGACGATGA...GAATGTACTTGATCGTCTCCTCAGTCTTCTAAGGCTACTTAAGCGTTTAAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCATATAATCTTCACTGTGTTGAACAAAAGAGGAGAAGGGACCCAGACATTTCAGCCTCCCAGTGTTaGCTGATTGCTGAACTATGT | + |
|
Preference number: 5 (lower is better) Translates to: KAYNLHCVEQKRRRDPDISASQC*LIAELC Trigger: ACATAGTTCAGCAATCAGCAAACACTGGGAGGCTGA...AATGTCTGGGTCCCTTCTCCTCTTTTGTTCAACACAGTGAAGATTATATGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 |
||
| CDS-3UTR CAA 90 bp | ACAACAAAGACAGGGCTTCCATTACTAAGTTTTTGCACAAAACACAGCTGTAGAAGAGTCCCTCTGTTCTaGGAGTTCTCTGGCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: TTKTGLPLLSFCTKHSCRRVPLF*EFSGII Trigger: GATAATGCCAGAGAACTCCAAGAACAGAGGGACTCT...TCTACAGCTGTGTTTTGTGCAAAAACTTAGTAATGGAAGCCCTGTCTTTGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | GTGCATTCATTGACTCCAGAGTTAGGTACCCAAGCATACACTAAGAAGAACCCTTGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VHSLTPELGTQAYTKKNPWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...AGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCAATGAATGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCTAGGAAGACAGACAGCATCTCTCCATCTATTGGCACTGAAATTTCACTGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TVLGRQTASLHLLALKFHWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...GTGAAATTTCAGTGCCAATAGATGGAGAGATGCTGTCTGTCTTCCTAGGACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109495.8 ENSMUST00000109496.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCCTTGTTCCACAGCCTGCTAAGAAAAATCTTCCATGCTGGTCTAGTATGTACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSLFHSLLRKIFHAGLVCTFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...ACATACTAGACCAGCATGGAAGATTTTTCTTAGCAGGCTGTGGAACAAGGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS-3UTR CAA 90 bp | TCTTCATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAAGAACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRSYSDFQQIFPPSSRTFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...TCTTGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCTTCTCACACAGAAGTCAAGCAGGTGTCTTCTTTTAAGAAGAACTATGTCATCGTCTGTCCCATaGATACTTTCTGGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALLLTQKSSRCLLLRRTMSSSVP*ILSGVK Trigger: TTTGACACCAGAAAGTATCAATGGGACAGACGATGA...CATAGTTCTTCTTAAAAGAAGACACCTGCTTGACTTCTGTGTGAGAAGAAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCAATCATCGTCTGTCCCATaGATACTTTCTGGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLHHGVTLIFSRSFPLHQSSSVP*ILSGVK Trigger: TTTGACACCAGAAAGTATCAATGGGACAGACGATGA...TTGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATGAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTTAAACGCTTAAGTAGCCTTAGAAGACTGAGGAGACGATCAAGTACATTCTGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLKRLSSLRRLRRRSSTFWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...GAATGTACTTGATCGTCTCCTCAGTCTTCTAAGGCTACTTAAGCGTTTAAGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079086.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTCATCACGGAGTTACTCTGATTTTCAGCAGATCTTTCCCCCTTCATCATGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSRSYSDFQQIFPPSSWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...TGATGAAGGGGGAAAGATCTGCTGAAAATCAGAGTAACTCCGTGATGAAGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTCGGATCCTTGGGTAGTTTTTCAAAACAGAAAGGACACATTGAGACTGGATGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TVGSLGSFSKQKGHIETGWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...TCCAGTCTCAATGTGTCCTTTCTGTTTTGAAAAACTACCCAAGGATCCGACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | AGATATATTCATATCATACCCCCTTCACAAGACAGAGAGGGACAGCAGATCATTACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RYIHIIPPSQDREGQQIITFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...AATGATCTGCTGTCCCTCTCTGTCTTGTGAAGGGGGTATGATATGAATATATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | AATACACTGTCGGATCCTTGGGTAGTTTTTCAAAACAGAAAGGACACATTGAGATCATCGTCTGTCCCATaGATACTTTCTGGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NTLSDPWVVFQNRKDTLRSSSVP*ILSGVK Trigger: TTTGACACCAGAAAGTATCAATGGGACAGACGATGA...TCTCAATGTGTCCTTTCTGTTTTGAAAAACTACCCAAGGATCCGACAGTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109494.8 |
||
| CDS-3UTR CAA 90 bp | ACAACAAAGACAGGGCTTCCATTACTAAGTTTTTGCACAAAACACAGCTGTAGACTGCATTCCAGTAGCTaGGCCAAATTATCTCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: TTKTGLPLLSFCTKHSCRLHSSS*AKLSRN Trigger: ATTACGAGATAATTTGGCCAAGCTACTGGAATGCAG...TCTACAGCTGTGTTTTGTGCAAAAACTTAGTAATGGAAGCCCTGTCTTTGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | CAAGAGCTTTTCAGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACATTTTTCTGGTGCTATTTATTATaGCCTTTGAGCCATCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QELFSLLGISEARSMTFFWCYLL*PLSHLN Trigger: GTTTAGATGGCTCAAAGGCAATAATAAATAGCACCA...GAAAAATGTCATGGACCTTGCTTCACTAATACCCAGAAGACTGAAAAGCTCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCATATAATCTTCACTGTGTTGAACAAAAGAGGAGAAGGGACCCAGACATTACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAYNLHCVEQKRRRDPDITFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...AATGTCTGGGTCCCTTCTCCTCTTTTGTTCAACACAGTGAAGATTATATGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCTGGGTATTAGTGAAGCAAGGTCCATGACATTTTTCCAAAGTTCTAAAACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLGISEARSMTFFQSSKTFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...TTTAGAACTTTGGAAAAATGTCATGGACCTTGCTTCACTAATACCCAGAAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109492.9 ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGCTGCATTCCAGTAGCTTGGCCAAATTATCTCGTAATTCTGTTAGTTCAAACTTTTCTGCGAATTTaGAAAGATGATGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSCIPVAWPNYLVILLVQTFLRI*KDDAQR Trigger: CCTCTGAGCATCATCTTTCAAAATTCGCAGAAAAGT...TTGAACTAACAGAATTACGAGATAATTTGGCCAAGCTACTGGAATGCAGCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109495.8 |
||
| CDS GCA 90 bp | TTATGTTTCTTCCAGGTCATTTGTATCTTTCCAATTAGAATAAACTaGAGATCCTCTTCTTCCAGGGGAAATGGTGACTTCACTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCFFQVICIFPIRIN*RSSSSRGNGDFTNF Trigger: GAAATTAGTGAAGTCACCATTTCCCCTGGAAGAAGAGGATCTGCAGTTTATTCTAATTGGAAAGATACAAATGACCTGGAAGAAACATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109493.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGTTGCATCTCAACATGCAATAATAACACATTAGTAGAGAACAAGGTGAGTATCATGATTGCTGAATaGAATGTGTACCTATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSCISTCNNNTLVENKVSIMIAE*NVYLCG Trigger: TCCACATAGGTACACATTCAATTCAGCAATCATGAT...ACTCACCTTGTTCTCTACTAATGTGTTATTATTGCATGTTGAGATGCAACTGCA 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
||
| CDS GCA 72 bp | GCTTCCTCCTGGTACGCAGCAAGCTGTTGCTTCCACTaGTTCACATTGGCAGTGGACTCCAGCAGGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSWYAASCCFH*FTLAVDSSRAA Trigger: TGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAGCAGTGGAAGCAACAGCTTGCTGCGTACCAGGAGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
||
| CDS CCA 72 bp | TCAGTGACCCGCTTGTGCAGCCGCTCTGCTTCCTCCTaGTACGCAGCAAGCTGTTGCTTCCACTGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SVTRLCSRSASS*YAASCCFHCFT Trigger: TGTGAAGCAGTGGAAGCAACAGCTTGCTGCGTACCAGGAGGAAGCAGAGCGGCTGCACAAGCGGGTCACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
||
| CDS CAA 72 bp | GCAGTGGACTCCAGCAGGGCTGCAGTGAGTTTGGCATaGTTGCCTTTGAGGGTAGCTAGCTCAGCCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVDSSRAAVSLA*LPLRVASSASQ Trigger: CTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 72 bp | GTGGACTCCAGCAGGGCTGCAGTGAGTTTGGCATTGTaGCCTTTGAGGGTAGCTAGCTCAGCCTCCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VDSSRAAVSLAL*PLRVASSASQC Trigger: ACACTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 90 bp | CACTGCTTCACATTGGCAGTGGACTCCAGCAGGGCTGCAGTGAGTTaGGCATTGTTGCCTTTGAGGGTAGCTAGCTCAGCCTCCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: HCFTLAVDSSRAAVS*ALLPLRVASSASQC Trigger: ACACTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 90 bp | CACTGTCTGGTTCAGCTCTGTCTTGTGGCTGTGCACAGCGTTTGCTaGACTACTAACACACTCCAGCTCAGTGACCCGCTTGTGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: HCLVQLCLVAVHSVC*TTNTLQLSDPLVQP Trigger: CGGCTGCACAAGCGGGTCACTGAGCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAACCAGACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 72 bp | TCCAGCAGGGCTGCAGTGAGTTTGGCATTGTTGCCTTaGAGGGTAGCTAGCTCAGCCTCCCAGTGTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSRAAVSLALLP*RVASSASQCLL Trigger: CAGCAAACACTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 90 bp | GCAGTGGACTCCAGCAGGGCTGCAGTGAGTTTGGCATTGTTGCCTTaGAGGGTAGCTAGCTCAGCCTCCCAGTGTTTGCTGATTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: AVDSSRAAVSLALLP*RVASSASQCLLIAE Trigger: TTCAGCAATCAGCAAACACTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 90 bp | TTCACATTGGCAGTGGACTCCAGCAGGGCTGCAGTGAGTTTGGCATaGTTGCCTTTGAGGGTAGCTAGCTCAGCCTCCCAGTGTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FTLAVDSSRAAVSLA*LPLRVASSASQCLL Trigger: CAGCAAACACTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCCACTGCCAATGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS TCA 72 bp | TCAGCCTCCCAGTGTTTGCTGATTGCTGAACTAGCATaGGAGAGGGCCTGGGTTCGATCCCCAGCACTATGT | + |
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Preference number: 6 (lower is better) Translates to: SASQCLLIAELA*ERAWVRSPALC Trigger: ACATAGTGCTGGGGATCGAACCCAGGCCCTCTCTCATGCTAGTTCAGCAATCAGCAAACACTGGGAGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080127.12 |
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| CDS CAA 90 bp | ACATTGGCAGTGGACTCCAGCAGGGCTGCAGTGAGTTTGGCATTGTaGCCTTTGAGGGTAGCTAGCTCAGCCTCCCAGTGTTTGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: TLAVDSSRAAVSLAL*PLRVASSASQCLLI Trigger: AATCAGCAAACACTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAACAATGCCAAACTCACTGCAGCCCTGCTGGAGTCCACTGCCAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS TCA 72 bp | TGGCAATGCATTCTGAGTTGGCTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCGGGTGTTCTCTCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: WQCILSWLSPWL*VLCHIGCSLIV Trigger: GACGATGAGAGAACACCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000102752.10 ENSMUST00000109492.9 ENSMUST00000109493.9 ENSMUST00000109494.8 ENSMUST00000109495.8 |
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| CDS CAA 72 bp | GTTCAGCTCTGTCTTGTGGCTGTGCACAGCGTTTGCTaGACTACTAACACACTCCAGCTCAGTGACCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: VQLCLVAVHSVC*TTNTLQLSDPL Trigger: AAGCGGGTCACTGAGCTGGAGTGTGTTAGTAGTCAAGCAAACGCTGTGCACAGCCACAAGACAGAGCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 90 bp | CAGCACTATGTGGAAATGGCAATGCATTCTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCGGGTGTTCTCTCATCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: QHYVEMAMHSELAQP*ALSSVSHRVFSHRL Trigger: CAGACGATGAGAGAACACCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGCCATTTCCACATAGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080127.12 ENSMUST00000109494.8 |
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| CDS CAA 90 bp | GCTGTCTATGTGGAAATGGCAATGCATTCTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCGGGTGTTCTCTCATCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: AVYVEMAMHSELAQP*ALSSVSHRVFSHRL Trigger: CAGACGATGAGAGAACACCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGCCATTTCCACATAGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109493.9 |
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| CDS CAA 90 bp | CTGAACTATGTGGAAATGGCAATGCATTCTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCGGGTGTTCTCTCATCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LNYVEMAMHSELAQP*ALSSVSHRVFSHRL Trigger: CAGACGATGAGAGAACACCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGCCATTTCCACATAGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 |
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| CDS CAA 90 bp | ACTTCCTATGTGGAAATGGCAATGCATTCTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCGGGTGTTCTCTCATCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: TSYVEMAMHSELAQP*ALSSVSHRVFSHRL Trigger: CAGACGATGAGAGAACACCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGCCATTTCCACATAGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109495.8 |
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| CDS CAA 90 bp | TGTACCTATGTGGAAATGGCAATGCATTCTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCGGGTGTTCTCTCATCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: CTYVEMAMHSELAQP*ALSSVSHRVFSHRL Trigger: CAGACGATGAGAGAACACCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGCCATTTCCACATAGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102752.10 |
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| CDS CCA 72 bp | TTTACTTTCAGGGTCTCTTCCAGTTCCTGCACTGTCTaGTTCAGCTCTGTCTTGTGGCTGTGCACAGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: FTFRVSSSSCTV*FSSVLWLCTAF Trigger: AAACGCTGTGCACAGCCACAAGACAGAGCTGAACCAGACAGTGCAGGAACTGGAAGAGACCCTGAAAGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000109496.8 ENSMUST00000109497.8 ENSMUST00000109498.8 |
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| CDS CAA 90 bp | AAGAACTATGTGGAAATGGCAATGCATTCTGAGTTGGCTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCGGGTGTTCTCTCATCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KNYVEMAMHSELAQP*ALSSVSHRVFSHRL Trigger: CAGACGATGAGAGAACACCCGATGTGACACAGAACTCAGAGCCAAGGGCTGAGCCAACTCAGAATGCATTGCCATTTCCACATAGTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109492.9 |
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| CDS CAA 72 bp | TTGCCTTTGAGGGTAGCTAGCTCAGCCTCCCAGTGTTaGCTGATTGCTGAACTATGTGGAAATGGCAATGCA | + |
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Preference number: 6 (lower is better) Translates to: LPLRVASSASQC*LIAELCGNGNA Trigger: TGCATTGCCATTTCCACATAGTTCAGCAATCAGCAAACACTGGGAGGCTGAGCTAGCTACCCTCAAAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 |
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| CDS TCA 72 bp | GTGTCACATCGGGTGTTCTCTCATCGTCTGTCCCATTaGTACTTTCTGGTGTCAAAGGAGACTGAAGATCTC | + |
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Preference number: 6 (lower is better) Translates to: VSHRVFSHRLSH*YFLVSKETEDL Trigger: GAGATCTTCAGTCTCCTTTGACACCAGAAAGTATCAATGGGACAGACGATGAGAGAACACCCGATGTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000060490.11 ENSMUST00000079086.8 ENSMUST00000080127.12 ENSMUST00000102752.10 ENSMUST00000109492.9 ENSMUST00000109493.9 ENSMUST00000109494.8 ENSMUST00000109495.8 |
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| CDS CAA 90 bp | ATTTCAAAAATAACCAAGGCCAGAGGAGCTCTCCAGCAAAGAAAGTaGGCTGTCTATGTGGAAATGGCAATGCATTCTGAGTTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: ISKITKARGALQQRK*AVYVEMAMHSELAQ Trigger: CTGAGCCAACTCAGAATGCATTGCCATTTCCACATAGACAGCCAACTTTCTTTGCTGGAGAGCTCCTCTGGCCTTGGTTATTTTTGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109493.9 |
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