Pregenerated sensors for HOGA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025176Ensembl transcript IDs: ENSMUST00000081714.5, ENSMUST00000172244.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGTCCAAGCAGGCCGCCATGCTCCCTaGCATGATGATGATGGACTG | + |
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Preference number: 2 (lower is better) Translates to: CWRLCHWRWALRFSKVQAGRHAP*HDDDGL Trigger: CAGTCCATCATCATCATGGCAGGGAGCATGGCGGCC...TGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTACAGGGCCTATGAGGCCTGGGACGGAATGTGGTGGTTTGATTAAGAATACTGGAGGTGGGCTTTaGGGTTTTCAAAAGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: MATGPMRPGTECGGLIKNTGGGL*GFQKSK Trigger: CTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGT...ATTCTTAATCAAACCACCACATTCCGTCCCAGGCCTCATAGGCCCTGTAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CAA 90 bp | CTTAGGGAGTGGCACTATTTGAAAGGATTAGAAGGTGTGGCCTTGTaGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LREWHYLKGLEGVAL*EAVSLEVGFEVFKS Trigger: ACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCACACCTTCTAATCCTTTCAAATAGTGCCACTCCCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CAA 90 bp | ATGCTTAGGGAGTGGCACTATTTGAAAGGATTAGAAGGTGTGGCCTaGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: MLREWHYLKGLEGVA*LEAVSLEVGFEVFK Trigger: TTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCACACCTTCTAATCCTTTCAAATAGTGCCACTCCCTAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR-3UTR GCA 90 bp | AGATGTAGAACTCTCTGCTTCTTCTTCAGCACCATGACTGCCTGCAGGCCGCCACTTTCTTTTATGAGTTaGCATGGTCTTGGCGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RCRTLCFFFSTMTACRPPLSFMS*HGLGVF Trigger: AAAGACGCCAAGACCATGGCAACTCATAAAAGAAAG...TGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGAGTTCTACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAAAGTCCAAGCAAGGCCGAGTAGCTTTCTCTTCCTGCTTCCTGTAGATCTAATGATGATGATGGACTaGACCTCTGAAACTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: SKVQARPSSFLFLLPVDLMMMMD*TSETVS Trigger: GCTTACAGTTTCAGAGGTTCAGTCCATCATCATCAT...TAGATCTACAGGAAGCAGGAAGAGAAAGCTACTCGGCCTTGCTTGGACTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CAA 90 bp | TCTGAAACTGTAAGCCAGCCACCCTTAAACACTTTCTTTTATGAGTaGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGACAA | + |
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Preference number: 2 (lower is better) Translates to: SETVSQPPLNTFFYE*PWSWRLFTAREHRQ Trigger: TTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAAGGGTGGCTGGCTTACAGTTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR-3UTR CCA 90 bp | TTAAACACTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGACTCCTCCTCAGGCTGTaGGAACAAAAGTCCCAGATA | + |
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Preference number: 2 (lower is better) Translates to: LNTFFYELPWSWRLFTARLLLRL*EQKSQI Trigger: TATCTGGGACTTTTGTTCCCACAGCCTGAGGAGGAG...TCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR TCA 72 bp | CAGGCCGCCATGCTCCCTGCCATGATGATGATGGACTaGACCTCTGAAACTGTAAGCCAGCCACCCTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: QAAMLPAMMMMD*TSETVSQPPLN Trigger: GTTTAAGGGTGGCTGGCTTACAGTTTCAGAGGTTCAGTCCATCATCATCATGGCAGGGAGCATGGCGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR TCA 72 bp | CTAGATGTAGAACTCTCTGCTTCTTCTTCAGCACCATaGCTGCCTGCAGGCCGCCATGCTCCCTGCCATGAT | + |
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Preference number: 3 (lower is better) Translates to: LDVELSASSSAP*LPAGRHAPCHD Trigger: ATCATGGCAGGGAGCATGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGAGTTCTACATCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR TCA 72 bp | GGCCTTGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTaGGGTTTTCAAAAGTCCAAGCAAGGCCGAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: GLVGGCVTGGGL*GFQKSKQGRVA Trigger: AGCTACTCGGCCTTGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CCA 72 bp | AAGGTGTGGCCTTGTTGGAGGCTGTGTCACTGGAGGTaGGCTTTGAGGTTTTCAAAAGTCCAAGCAAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: KVWPCWRLCHWR*ALRFSKVQARP Trigger: CGGCCTTGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCACACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR GCA 72 bp | CTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTaGTTCTTCTTCAGCACCATGACTGCCTGCAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: LPASCRSRCRTL*FFFSTMTACRP Trigger: CGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CCA 72 bp | CAGCCACCCTTAAACACTTTCTTTTATGAGTTGCCATaGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGA | + |
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Preference number: 3 (lower is better) Translates to: QPPLNTFFYELP*SWRLFTAREHR Trigger: TCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAAGGGTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CCA 72 bp | CCCTTAAACACTTTCTTTTATGAGTTGCCATGGTCTTaGCGTCTTTTCACAGCAAGAGAACACAGACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: PLNTFFYELPWS*RLFTAREHRQK Trigger: TTTTTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TCTCTGCTTCTTCTTCAGCACCATGACTGCCTGCAGGCCGCCATGCTCCCTGCCTCCTTGGGTATGGCCTaGCGCACGCGGCTCACCACC | + |
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Preference number: 4 (lower is better) Translates to: SLLLLQHHDCLQAAMLPASLGMA*RTRLTT Trigger: GGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGA...GGCAGGGAGCATGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR GCA 90 bp | TCTCTGCTTCTTCTTCAGCACCATGACTGCCTGCAGGCCGCCATGCTCCCTGCCTGGGCAGCTTCCCACTaGCCTGTGAGGCAGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLLLLQHHDCLQAAMLPAWAASH*PVRQSL Trigger: GAGACTCTGCCTCACAGGGCAGTGGGAAGCTGCCCA...GGCAGGGAGCATGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TCTCTGCTTCTTCTTCAGCACCATGACTGCCTGCAGGCCGCCATGCTCCCTGCCCGGTGCTGTAGTTCCTaGGCAGCTTCCCACTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SLLLLQHHDCLQAAMLPARCCSS*AASHCP Trigger: AGGGCAGTGGGAAGCTGCCCAGGAACTACAGCACCG...GGCAGGGAGCATGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR GCA 90 bp | GTGGCCTTGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGTGTGGGGCTCAGCTCCTaGAACGGGGCGCGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VALLEAVSLEVGFEVFKSVGLSS*NGARQG Trigger: TCCCTGCCGCGCCCCGTTGCAGGAGCTGAGCCCCAC...ACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR TCA 90 bp | CCGAGTAGCTTTCTCTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTGCTCCTCTGCGGTGGCGGTaGATGGGGTGGTCACGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PSSFLFLLPVDLDVELSAPLRWR*MGWSRV Trigger: CACCCGTGACCACCCCATTCACCGCCACCGCAGAGG...AGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAGAGAAAGCTACTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR TCA 90 bp | TCTCTGCTTCTTCTTCAGCACCATGACTGCCTGCAGGCCGCCATGCTCCCTGCCTGTCCTTCAAGCCGATaGTATTTGGGTGCTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: SLLLLQHHDCLQAAMLPACPSSR*YLGAET Trigger: TGTCTCAGCACCCAAATATCATCGGCTTGAAGGACA...GGCAGGGAGCATGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGTCCAAGCAGTGCCTCCTCCTCTGTaGGGCTCAGCTCCTGCAACG | + |
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Preference number: 4 (lower is better) Translates to: CWRLCHWRWALRFSKVQAVPPPL*GSAPAT Trigger: CGTTGCAGGAGCTGAGCCCCACAGAGGAGGAGGCAC...TGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR GCA 90 bp | GTGGCCTTGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGTGGGCAGCGCTGCTCATaGGGCCACGATAGTAACAAG | + |
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Preference number: 4 (lower is better) Translates to: VALLEAVSLEVGFEVFKSGQRCS*GHDSNK Trigger: CTTGTTACTATCGTGGCCGCATGAGCAGCGCTGCCC...ACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTAGAAGGTGTGGCCTTGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTAAGGGGTCACCACCATaGCGACATCAGCACCCACCT | + |
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Preference number: 4 (lower is better) Translates to: KGLEGVALLEAVSLEVGFKGSPP*RHQHPP Trigger: AGGTGGGTGCTGATGTCGCCATGGTGGTGACCCCTT...AAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCACACCTTCTAATCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CAA 72 bp | TGGCCTTGTTGGAGGCTGTGTCACTGGAGGTGGGCTTaGAGGTTTTCAAAAGTCCAAGCAAGGCCGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: WPCWRLCHWRWA*RFSKVQARPSS Trigger: GCTACTCGGCCTTGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATTAGAAGGTGTGGCCTTGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGCCAGCCATTGTTGCTaGAATCCAAGCGCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KGLEGVALLEAVSLEVGFASHCC*NPSAVP Trigger: AGGCACTGCGCTTGGATTTCAGCAACAATGGCTGGC...AAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCACACCTTCTAATCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR GCA 90 bp | TGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGTCCAAGCACCCATAGTCTACCTCTaGGGTGGCGGTGAATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CWRLCHWRWALRFSKVQAPIVYL*GGGEWG Trigger: ACCCCATTCACCGCCACCGCAGAGGTAGACTATGGG...TGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGTCCAAGCATCAGGAACTTGTCCTTaGGTATGGCCTGGCGCACGC | + |
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Preference number: 4 (lower is better) Translates to: CWRLCHWRWALRFSKVQASGTCP*VWPGAR Trigger: GCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGA...TGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | CCGAGTAGCTTTCTCTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTGCTTCCAGCTGGCACACCTaGGCCCCCAAGACATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PSSFLFLLPVDLDVELSASSWHT*APKTLA Trigger: GGCCAATGTCTTGGGGGCCCAGGTGTGCCAGCTGGA...AGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAGAGAAAGCTACTCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR TCA 90 bp | TGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTTTTCAAAAGTCCAAGCAACATCAGCACCCACCTaGGCCATGCTGACAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: CWRLCHWRWALRFSKVQATSAPT*AMLTVI Trigger: GATGACTGTCAGCATGGCTCAGGTGGGTGCTGATGT...TGCTTGGACTTTTGAAAACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | CCGAGTAGCTTTCTCTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTGCTTGGGGTGGTCACGGGTaGGTAGATGCCGGCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: PSSFLFLLPVDLDVELSAWGGHG*VDAGNV Trigger: GACATTGCCGGCATCTACCCACCCGTGACCACCCCA...AGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAGAGAAAGCTACTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | AGATGTAGAACTCTCTGCTTCTTCTTCAGCACCATGACTGCCTGCAGGCCGCCACTATCAGTCCAATCCTaGTCACATCTCCACCACTGT | + |
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Preference number: 4 (lower is better) Translates to: RCRTLCFFFSTMTACRPPLSVQS*SHLHHC Trigger: ACAGTGGTGGAGATGTGACCAGGATTGGACTGATAG...TGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGAGTTCTACATCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CAA 72 bp | GAGTGGCACTATTTGAAAGGATTAGAAGGTGTGGCCTaGTTGGAGGCTGTGTCACTGGAGGTGGGCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: EWHYLKGLEGVA*LEAVSLEVGFE Trigger: CTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCACACCTTCTAATCCTTTCAAATAGTGCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR TCA 90 bp | CCGAGTAGCTTTCTCTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTGCTCCACCTGAGCCATGCTaGCAGTCATCTCTACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PSSFLFLLPVDLDVELSAPPEPC*QSSLLW Trigger: CCACAGTAGAGATGACTGTCAGCATGGCTCAGGTGG...AGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAGAGAAAGCTACTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACACTTCCCACTGCCCTGTaGGGCAGAGTCTCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSFMSCHGLGVFSQQENTLPTAL*GRVSPA Trigger: AGCTGGAGAGACTCTGCCTCACAGGGCAGTGGGAAG...TGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACACTCCCACAGCATAGCTaGCCAGGAGGAAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSFMSCHGLGVFSQQENTLPQHS*PGGSQL Trigger: CAGCTGGCTTCCTCCTGGCCAGCTATGCTGTGGGAG...TGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTCTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTGCTTCTTCTTCGGGCCCCCAAGACATTaGCCAAGCCACATATGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSLPASCRSRCRTLCFFFGPPRH*PSHICP Trigger: GGGGCATATGTGGCTTGGCCAATGTCTTGGGGGCCC...GAAGAAGAAGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAGAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CAA 72 bp | TGGCACTATTTGAAAGGATTAGAAGGTGTGGCCTTGTaGGAGGCTGTGTCACTGGAGGTGGGCTTTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: WHYLKGLEGVAL*EAVSLEVGFEV Trigger: AACCTCAAAGCCCACCTCCAGTGACACAGCCTCCAACAAGGCCACACCTTCTAATCCTTTCAAATAGTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR TCA 90 bp | AGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGACAAAAATAAGTGGTGTAGTGGTGAATaGGGGCAGCGCTGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: SCHGLGVFSQQENTDKNKWCSGE*GQRCSC Trigger: GCATGAGCAGCGCTGCCCTCATTCACCACTACACCA...CTTATTTTTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR GCA 90 bp | TATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGACAAAAAGAAATCCAAGCGCAGTaGCTCCTCCTCTGTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: YELPWSWRLFTAREHRQKEIQAQ*LLLCGA Trigger: AGCCCCACAGAGGAGGAGGCACTGCGCTTGGATTTC...TTTTTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TTAAACACTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAACTTGTCCTTGGGTATaGCCTGGCGCACGCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LNTFFYELPWSWRLFTARTCPWV*PGARGS Trigger: TGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGT...TCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGACAAAAAGCTCTAGCCCCGTATTaGCTGGGACACTGTACAACA | + |
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Preference number: 4 (lower is better) Translates to: YELPWSWRLFTAREHRQKALAPY*LGHCTT Trigger: TGTTGTACAGTGTCCCAGCCAATACGGGGCTAGAGC...TTTTTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | ATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGACAAAAATAAGCCCTAATGACCCAGCCAACACCTaGAAATCCTGCTTGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: MVLASFHSKRTQTKISPNDPANT*KSCLLV Trigger: GACCAGCAAGCAGGATTTCCAGGTGTTGGCTGGGTC...ATTAGGGCTTATTTTTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGACAAAAAGGTTTTCTTCAGCCCTaGTATTCCAAAGCGCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: YELPWSWRLFTAREHRQKGFLQP*YSKAPG Trigger: ACCCGGCGCTTTGGAATACCAGGGCTGAAGAAAACC...TTTTTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TCAAAAGTCCAAGCAAGGCCGAGTAGCTTTCTCTTCCTGCTTCCTGTAGATCTAGGAAATCCTGCTTGCTaGTCTTGTGAACTATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SKVQARPSSFLFLLPVDLGNPAC*SCELSV Trigger: GACTGATAGTTCACAAGACCAGCAAGCAGGATTTCC...TAGATCTACAGGAAGCAGGAAGAGAAAGCTACTCGGCCTTGCTTGGACTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR CCA 90 bp | TTAAACACTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGACTCGAAAGGGGAAGGTaGCCAGTCTGTTCAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LNTFFYELPWSWRLFTARLERGR*PVCSGS Trigger: AGAACCTGAACAGACTGGCCACCTTCCCCTTTCGAG...TCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| 3UTR CAA 72 bp | GTAAGCCAGCCACCCTTAAACACTTTCTTTTATGAGTaGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VSQPPLNTFFYE*PWSWRLFTARE Trigger: TTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAAGGGTGGCTGGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS-3UTR GCA 90 bp | CTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACACCTGGAAATCCTGCTTaGTGGTCTTGTGAACTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFMSCHGLGVFSQQENTPGNPA*WSCELS Trigger: TGATAGTTCACAAGACCAGCAAGCAGGATTTCCAGG...TGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS-3UTR CCA 90 bp | TTAAACACTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGACAACACCACAGGGATTaGAGAAACGTCAGCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNTFFYELPWSWRLFTARQHHRD*RNVSNL Trigger: AAGGTTGCTGACGTTTCTCCAATCCCTGTGGTGTTG...TCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS-3UTR CCA 90 bp | TTAAACACTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAAGCCAAACCAGTCCATaGTTTTCTTCAGCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNTFFYELPWSWRLFTARSQTSP*FSSALV Trigger: TACCAGGGCTGAAGAAAACCATGGACTGGTTTGGCT...TCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 90 bp | TCGCAGCCAGAGCCGGCTATCAGGAACTTGTCCTTGGGTATGGCCTaGCGCACGCGGCTCACCACCTCCAGGCGCTCGAGGCTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPEPAIRNLSLGMA*RTRLTTSRRSRLVR Trigger: CCTGACCAGCCTCGAGCGCCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 90 bp | TGGACTCGCAGCCAGAGCCGGCTATCAGGAACTTGTCCTTGGGTATaGCCTGGCGCACGCGGCTCACCACCTCCAGGCGCTCGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WTRSQSRLSGTCPWV*PGARGSPPPGARGW Trigger: CCAGCCTCGAGCGCCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGTCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 90 bp | GTATGGCCTGGCGCACGCGGCTCACCACCTCCAGGCGCTCGAGGCTaGTCAGGAACGGAAACTCTCCAGTCGAACCCTGGACCACGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VWPGARGSPPPGARG*SGTETLQSNPGPRS Trigger: GCTTCGTGGTCCAGGGTTCGACTGGAGAGTTTCCGTTCCTGACCAGCCTCGAGCGCCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 90 bp | CTTGCGTGGACTCGCAGCCAGAGCCGGCTATCAGGAACTTGTCCTTaGGTATGGCCTGGCGCACGCGGCTCACCACCTCCAGGCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LAWTRSQSRLSGTCP*VWPGARGSPPPGAR Trigger: TCGAGCGCCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGTCCACGCAAG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS GCA 90 bp | TTGGGCTCGATGAGACGGTGCTGTAGTTCCTGGGCAGCTTCCCACTaGCCTGTGAGGCAGAGTCTCTCCAGCTGGCACACCTGGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSMRRCCSSWAASH*PVRQSLSSWHTWAP Trigger: GGGGGCCCAGGTGTGCCAGCTGGAGAGACTCTGCCTCACAGGGCAGTGGGAAGCTGCCCAGGAACTACAGCACCGTCTCATCGAGCCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS GCA 90 bp | CCAGCTGGCACACCTGGGCCCCCAAGACATTGGCCAAGCCACATATaGCCCCAACAGCTCCCACAGCATAGCTGGCCAGGAGGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAGTPGPPRHWPSHI*PQQLPQHSWPGGSQ Trigger: CTGGCTTCCTCCTGGCCAGCTATGCTGTGGGAGCTGTTGGGGGCATATGTGGCTTGGCCAATGTCTTGGGGGCCCAGGTGTGCCAGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 90 bp | TCCTGGGCAGCTTCCCACTGCCCTGTGAGGCAGAGTCTCTCCAGCTaGCACACCTGGGCCCCCAAGACATTGGCCAAGCCACATATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWAASHCPVRQSLSS*HTWAPKTLAKPHMP Trigger: GGGCATATGTGGCTTGGCCAATGTCTTGGGGGCCCAGGTGTGCCAGCTGGAGAGACTCTGCCTCACAGGGCAGTGGGAAGCTGCCCAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 90 bp | GCAACGGGGCGCGGCAGGGACCTCCATAGTAGCCAAACCAGTCCATaGTTTTCTTCAGCCCTGGTATTCCAAAGCGCCGGGTCACCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATGRGRDLHSSQTSP*FSSALVFQSAGSPQ Trigger: CTGCGGTGACCCGGCGCTTTGGAATACCAGGGCTGAAGAAAACCATGGACTGGTTTGGCTACTATGGAGGTCCCTGCCGCGCCCCGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS TCA 90 bp | AAGGGGTCACCACCATGGCGACATCAGCACCCACCTGAGCCATGCTaGCAGTCATCTCTACTGTGGCTTGCGTGGACTCGCAGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGSPPWRHQHPPEPC*QSSLLWLAWTRSQS Trigger: GCTCTGGCTGCGAGTCCACGCAAGCCACAGTAGAGATGACTGTCAGCATGGCTCAGGTGGGTGCTGATGTCGCCATGGTGGTGACCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS TCA 90 bp | GCCCCCAACAGCTCCCACAGCATAGCTGGCCAGGAGGAAGCCAGCTaGCCCAGCCAACACCTGGAAATCCTGCTTGCTGGTCTTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: APNSSHSIAGQEEAS*PSQHLEILLAGLVN Trigger: GTTCACAAGACCAGCAAGCAGGATTTCCAGGTGTTGGCTGGGTCAGCTGGCTTCCTCCTGGCCAGCTATGCTGTGGGAGCTGTTGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 90 bp | CCCATAGTCTACCTCTGCGGTGGCGGTGAATGGGGTGGTCACGGGTaGGTAGATGCCGGCAATGTCTACCTTCTTGCCCTTCACATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PIVYLCGGGEWGGHG*VDAGNVYLLALHIP Trigger: AGGAATGTGAAGGGCAAGAAGGTAGACATTGCCGGCATCTACCCACCCGTGACCACCCCATTCACCGCCACCGCAGAGGTAGACTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 90 bp | GGGACCTCCATAGTAGCCAAACCAGTCCATGGTTTTCTTCAGCCCTaGTATTCCAAAGCGCCGGGTCACCGCAGTGTTGGGCTCGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTSIVAKPVHGFLQP*YSKAPGHRSVGLDE Trigger: CTCATCGAGCCCAACACTGCGGTGACCCGGCGCTTTGGAATACCAGGGCTGAAGAAAACCATGGACTGGTTTGGCTACTATGGAGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 90 bp | GTTCTCTTCCAGTTTCCCATAGTCTACCTCTGCGGTGGCGGTGAATaGGGTGGTCACGGGTGGGTAGATGCCGGCAATGTCTACCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLFQFPIVYLCGGGE*GGHGWVDAGNVYLL Trigger: AAGAAGGTAGACATTGCCGGCATCTACCCACCCGTGACCACCCCATTCACCGCCACCGCAGAGGTAGACTATGGGAAACTGGAAGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 90 bp | GGAGGAAGCCAGCTGACCCAGCCAACACCTGGAAATCCTGCTTGCTaGTCTTGTGAACTATCAGTCCAATCCTGGTCACATCTCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGSQLTQPTPGNPAC*SCELSVQSWSHLHH Trigger: GTGGTGGAGATGTGACCAGGATTGGACTGATAGTTCACAAGACCAGCAAGCAGGATTTCCAGGTGTTGGCTGGGTCAGCTGGCTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS TCA 90 bp | CCAGCTGACCCAGCCAACACCTGGAAATCCTGCTTGCTGGTCTTGTaGACTATCAGTCCAATCCTGGTCACATCTCCACCACTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PADPANTWKSCLLVL*TISPILVTSPPLSF Trigger: GAAGGACAGTGGTGGAGATGTGACCAGGATTGGACTGATAGTTCACAAGACCAGCAAGCAGGATTTCCAGGTGTTGGCTGGGTCAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS TCA 90 bp | GTCACATCTCCACCACTGTCCTTCAAGCCGATGATATTTGGGTGCTaGGACAATGTAACCACGGCATCCACAGGTAGCTCTAGCCCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: VTSPPLSFKPMIFGC*DNVTTASTGSSSPV Trigger: TACGGGGCTAGAGCTACCTGTGGATGCCGTGGTTACATTGTCTCAGCACCCAAATATCATCGGCTTGAAGGACAGTGGTGGAGATGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS-3UTR CAA 90 bp | AGATGTAGAACTCTCTGCTTCTTCTTCAGCACCATGACTGCCTGCAGGCCGCCAACAACACCACAGGGATaGGAGAAACGTCAGCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: RCRTLCFFFSTMTACRPPTTPQG*EKRQQP Trigger: AGGTTGCTGACGTTTCTCCAATCCCTGTGGTGTTGT...TGGCGGCCTGCAGGCAGTCATGGTGCTGAAGAAGAAGCAGAGAGTTCTACATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTGCTTCTTCTTCTGGGCCCCCAAGACATaGGCCAAGCCACATATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLPASCRSRCRTLCFFFWAPKT*AKPHMP Trigger: GGGCATATGTGGCTTGGCCAATGTCTTGGGGGCCCA...GAAGAAGAAGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAGAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS-3UTR CAA 90 bp | ACACTTTCTTTTATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACATCAGGAACTTGTCCTaGGGTATGGCCTGGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TLSFMSCHGLGVFSQQENIRNLS*GMAWRT Trigger: CGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGAT...GTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATAAAAGAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS-3UTR CAA 90 bp | TATGAGTTGCCATGGTCTTGGCGTCTTTTCACAGCAAGAGAACACAGACAAAAAAGCTCTAGCCCCGTATaGGCTGGGACACTGTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: YELPWSWRLFTAREHRQKSSSPV*AGTLYN Trigger: GTTGTACAGTGTCCCAGCCAATACGGGGCTAGAGCT...TTTTTGTCTGTGTTCTCTTGCTGTGAAAAGACGCCAAGACCATGGCAACTCATA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS-3UTR CAA 90 bp | CCGAGTAGCTTTCTCTTCCTGCTTCCTGTAGATCTAGATGTAGAACTCTCTGCTGCAATGTCTACCTTCTaGCCCTTCACATTCCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSSFLFLLPVDLDVELSAAMSTF*PFTFLD Trigger: GTCTAGGAATGTGAAGGGCAAGAAGGTAGACATTGC...AGCAGAGAGTTCTACATCTAGATCTACAGGAAGCAGGAAGAGAAAGCTACTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CAA 90 bp | GCTTGCGTGGACTCGCAGCCAGAGCCGGCTATCAGGAACTTGTCCTaGGGTATGGCCTGGCGCACGCGGCTCACCACCTCCAGGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ACVDSQPEPAIRNLS*GMAWRTRLTTSRRS Trigger: CGAGCGCCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGTCCACGCAAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 72 bp | GGCGCACGCGGCTCACCACCTCCAGGCGCTCGAGGCTaGTCAGGAACGGAAACTCTCCAGTCGAACCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GARGSPPPGARG*SGTETLQSNPG Trigger: TCCAGGGTTCGACTGGAGAGTTTCCGTTCCTGACCAGCCTCGAGCGCCTGGAGGTGGTGAGCCGCGTGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 72 bp | GAGCCGGCTATCAGGAACTTGTCCTTGGGTATGGCCTaGCGCACGCGGCTCACCACCTCCAGGCGCTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EPAIRNLSLGMA*RTRLTTSRRSR Trigger: CCTCGAGCGCCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS TCA 72 bp | GGTGCTGTAGTTCCTGGGCAGCTTCCCACTGCCCTGTaGGGCAGAGTCTCTCCAGCTGGCACACCTGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GAVVPGQLPTAL*GRVSPAGTPGP Trigger: GGGCCCAGGTGTGCCAGCTGGAGAGACTCTGCCTCACAGGGCAGTGGGAAGCTGCCCAGGAACTACAGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS GCA 72 bp | CGCCGGGTCACCGCAGTGTTGGGCTCGATGAGACGGTaGTGTAGTTCCTGGGCAGCTTCCCACTGCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRVTAVLGSMRR*CSSWAASHCPV Trigger: CACAGGGCAGTGGGAAGCTGCCCAGGAACTACAGCACCGTCTCATCGAGCCCAACACTGCGGTGACCCGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 72 bp | AGCCAGAGCCGGCTATCAGGAACTTGTCCTTGGGTATaGCCTGGCGCACGCGGCTCACCACCTCCAGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQSRLSGTCPWV*PGARGSPPPGA Trigger: AGCGCCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CAA 72 bp | GACTCGCAGCCAGAGCCGGCTATCAGGAACTTGTCCTaGGGTATGGCCTGGCGCACGCGGCTCACCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSQPEPAIRNLS*GMAWRTRLTTS Trigger: GGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CAA 72 bp | TGCGTGGACTCGCAGCCAGAGCCGGCTATCAGGAACTaGTCCTTGGGTATGGCCTGGCGCACGCGGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CVDSQPEPAIRN*SLGMAWRTRLT Trigger: GGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGTCCACGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CAA 90 bp | ACTGTGGCTTGCGTGGACTCGCAGCCAGAGCCGGCTATCAGGAACTaGTCCTTGGGTATGGCCTGGCGCACGCGGCTCACCACCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVACVDSQPEPAIRN*SLGMAWRTRLTTSR Trigger: CCTGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGTCCACGCAAGCCACAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 72 bp | ACTCGCAGCCAGAGCCGGCTATCAGGAACTTGTCCTTaGGTATGGCCTGGCGCACGCGGCTCACCACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TRSQSRLSGTCP*VWPGARGSPPP Trigger: TGGAGGTGGTGAGCCGCGTGCGCCAGGCCATACCCAAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 72 bp | GCTTCCCACTGCCCTGTGAGGCAGAGTCTCTCCAGCTaGCACACCTGGGCCCCCAAGACATTGGCCAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASHCPVRQSLSS*HTWAPKTLAKP Trigger: TGGCTTGGCCAATGTCTTGGGGGCCCAGGTGTGCCAGCTGGAGAGACTCTGCCTCACAGGGCAGTGGGAAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS GCA 72 bp | ACACCTGGGCCCCCAAGACATTGGCCAAGCCACATATaGCCCCAACAGCTCCCACAGCATAGCTGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPGPPRHWPSHI*PQQLPQHSWPG Trigger: TCCTGGCCAGCTATGCTGTGGGAGCTGTTGGGGGCATATGTGGCTTGGCCAATGTCTTGGGGGCCCAGGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 72 bp | GCAGTGTTGGGCTCGATGAGACGGTGCTGTAGTTCCTaGGCAGCTTCCCACTGCCCTGTGAGGCAGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVLGSMRRCCSS*AASHCPVRQSL Trigger: GAGACTCTGCCTCACAGGGCAGTGGGAAGCTGCCCAGGAACTACAGCACCGTCTCATCGAGCCCAACACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CAA 72 bp | AGCCCTGGTATTCCAAAGCGCCGGGTCACCGCAGTGTaGGGCTCGATGAGACGGTGCTGTAGTTCCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPGIPKRRVTAV*GSMRRCCSSWA Trigger: TGCCCAGGAACTACAGCACCGTCTCATCGAGCCCAACACTGCGGTGACCCGGCGCTTTGGAATACCAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS TCA 72 bp | CCACCATGGCGACATCAGCACCCACCTGAGCCATGCTaGCAGTCATCTCTACTGTGGCTTGCGTGGACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPWRHQHPPEPC*QSSLLWLAWTR Trigger: GCGAGTCCACGCAAGCCACAGTAGAGATGACTGTCAGCATGGCTCAGGTGGGTGCTGATGTCGCCATGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CCA 72 bp | TACCTCTGCGGTGGCGGTGAATGGGGTGGTCACGGGTaGGTAGATGCCGGCAATGTCTACCTTCTTGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YLCGGGEWGGHG*VDAGNVYLLAL Trigger: AAGGGCAAGAAGGTAGACATTGCCGGCATCTACCCACCCGTGACCACCCCATTCACCGCCACCGCAGAGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 72 bp | CAGTTTCCCATAGTCTACCTCTGCGGTGGCGGTGAATaGGGTGGTCACGGGTGGGTAGATGCCGGCAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: QFPIVYLCGGGE*GGHGWVDAGNV Trigger: GACATTGCCGGCATCTACCCACCCGTGACCACCCCATTCACCGCCACCGCAGAGGTAGACTATGGGAAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 72 bp | AGGCTGGTCAGGAACGGAAACTCTCCAGTCGAACCCTaGACCACGAAGCCTCGAAAGGGGAAGGTGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RLVRNGNSPVEP*TTKPRKGKVAS Trigger: ACTGGCCACCTTCCCCTTTCGAGGCTTCGTGGTCCAGGGTTCGACTGGAGAGTTTCCGTTCCTGACCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS CAA 90 bp | GTTTTCTTCAGCCCTGGTATTCCAAAGCGCCGGGTCACCGCAGTGTaGGGCTCGATGAGACGGTGCTGTAGTTCCTGGGCAGCTTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VFFSPGIPKRRVTAV*GSMRRCCSSWAASH Trigger: GTGGGAAGCTGCCCAGGAACTACAGCACCGTCTCATCGAGCCCAACACTGCGGTGACCCGGCGCTTTGGAATACCAGGGCTGAAGAAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 72 bp | CGCGGCAGGGACCTCCATAGTAGCCAAACCAGTCCATaGTTTTCTTCAGCCCTGGTATTCCAAAGCGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGRDLHSSQTSP*FSSALVFQSAG Trigger: CCCGGCGCTTTGGAATACCAGGGCTGAAGAAAACCATGGACTGGTTTGGCTACTATGGAGGTCCCTGCCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CAA 90 bp | ATCAGCACCCACCTGAGCCATGCTGACAGTCATCTCTACTGTGGCTaGCGTGGACTCGCAGCCAGAGCCGGCTATCAGGAACTTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ISTHLSHADSHLYCG*RGLAARAGYQELVL Trigger: AAGGACAAGTTCCTGATAGCCGGCTCTGGCTGCGAGTCCACGCAAGCCACAGTAGAGATGACTGTCAGCATGGCTCAGGTGGGTGCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS GCA 72 bp | TTAAAGCCAGCCATTGTTGCTGAAATCCAAGCGCAGTaGCTCCTCCTCTGTGGGGCTCAGCTCCTGCAACGG | + |
|
Preference number: 6 (lower is better) Translates to: LKPAIVAEIQAQ*LLLCGAQLLQR Trigger: CCGTTGCAGGAGCTGAGCCCCACAGAGGAGGAGGCACTGCGCTTGGATTTCAGCAACAATGGCTGGCTTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081714.5 ENSMUST00000172244.8 |
||
| CDS CCA 72 bp | TCGAACCCTGGACCACGAAGCCTCGAAAGGGGAAGGTaGCCAGTCTGTTCAGGTTCTCTTCCAGTTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SNPGPRSLERGR*PVCSGSLPVSH Trigger: ATGGGAAACTGGAAGAGAACCTGAACAGACTGGCCACCTTCCCCTTTCGAGGCTTCGTGGTCCAGGGTTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
||
| CDS TCA 72 bp | TTGGAGAAACGTCAGCAACCTTGGTGTAGTGGTGAATaGGGGCAGCGCTGCTCATGCGGCCACGATAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LEKRQQPWCSGE*GQRCSCGHDSN Trigger: GTTACTATCGTGGCCGCATGAGCAGCGCTGCCCTCATTCACCACTACACCAAGGTTGCTGACGTTTCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS CCA 72 bp | CACATATGCCCCCAACAGCTCCTCGAAAGGGGAAGGTaGCCAGTCTGTTCAGGTTCTCTTCCAGTTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: HICPQQLLERGR*PVCSGSLPVSH Trigger: ATGGGAAACTGGAAGAGAACCTGAACAGACTGGCCACCTTCCCCTTTCGAGGAGCTGTTGGGGGCATATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172244.8 |
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| CDS TCA 72 bp | CCACCACTGTCCTTCAAGCCGATGATATTTGGGTGCTaGGACAATGTAACCACGGCATCCACAGGTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PPLSFKPMIFGC*DNVTTASTGSS Trigger: AGAGCTACCTGTGGATGCCGTGGTTACATTGTCTCAGCACCCAAATATCATCGGCTTGAAGGACAGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS TCA 72 bp | CCAGCCAACACCTGGAAATCCTGCTTGCTGGTCTTGTaGACTATCAGTCCAATCCTGGTCACATCTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: PANTWKSCLLVL*TISPILVTSPP Trigger: TGGTGGAGATGTGACCAGGATTGGACTGATAGTTCACAAGACCAGCAAGCAGGATTTCCAGGTGTTGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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| CDS CCA 72 bp | CACATCTCCACCACTGTCCTTCAAGCCGATGATATTTaGGTGCTGAGACAATGTAACCACGGCATCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: HISTTVLQADDI*VLRQCNHGIHR Trigger: CCTGTGGATGCCGTGGTTACATTGTCTCAGCACCCAAATATCATCGGCTTGAAGGACAGTGGTGGAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081714.5 |
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