Pregenerated sensors for HNRNPUL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071659Ensembl transcript IDs: ENSMUST00000096753.5
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTaGACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCAC | + |
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Preference number: 1 (lower is better) Translates to: DRNKMQTSTLMQETS*TDPTRMWQCHSPFH Trigger: GTGGAATGGAGAATGACACTGCCACATCCTTGTTGGGTCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR GCA 90 bp | GGACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTaGTCAGGCAAGGAAGTGGAAGTGAAGTATGTCCTAGTAACTCAG | + |
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Preference number: 1 (lower is better) Translates to: GQGRFKSQHKFKQEN*SGKEVEVKYVLVTQ Trigger: CTGAGTTACTAGGACATACTTCACTTCCACTTCCTTGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR CCA 90 bp | CCACCTAAAATCCAGATCACAGAGTACCGTCAAAGTATTATTTGTTaGAGGACTAAACATCTGAAGGGACAGCTTCTGCCTCTGGAAATT | + |
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Preference number: 1 (lower is better) Translates to: PPKIQITEYRQSIIC*RTKHLKGQLLPLEI Trigger: AATTTCCAGAGGCAGAAGCTGTCCCTTCAGATGTTTAGTCCTCCAACAAATAATACTTTGACGGTACTCTGTGATCTGGATTTTAGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 90 bp | TATACATATCTTGACGCAGTAAACAAAAGTCTTGCTGCGTTTCTGTaGGCTGAAACCCTGAGAATCATTCCTTCCCTCACACTTGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: YTYLDAVNKSLAAFL*AETLRIIPSLTLVR Trigger: TCTTACAAGTGTGAGGGAAGGAATGATTCTCAGGGTTTCAGCTCACAGAAACGCAGCAAGACTTTTGTTTACTGCGTCAAGATATGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 90 bp | AAGGAAAGGTTGGTAAAGAAAATACAAACGGTTAGTTGGTGCAAGTaGTTCATAACAGCCAATTGTTTATTTCCACTGCCCTGTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: KERLVKKIQTVSWCK*FITANCLFPLPCSQ Trigger: CTGTGAACAGGGCAGTGGAAATAAACAATTGGCTGTTATGAATCACTTGCACCAACTAACCGTTTGTATTTTCTTTACCAACCTTTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR CCA 90 bp | CAAGAATGCTTTACAGGTTGTGCAAAAACATTTACAGGCTCCATGTaGTGTTTGTTTGTTTACAAGCTTTTCCATCTACAACTACAACAG | + |
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Preference number: 1 (lower is better) Translates to: QECFTGCAKTFTGSM*CLFVYKLFHLQLQQ Trigger: CTGTTGTAGTTGTAGATGGAAAAGCTTGTAAACAAACAAACACCACATGGAGCCTGTAAATGTTTTTGCACAACCTGTAAAGCATTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 90 bp | CTGTTGCTGAGTAAGCTTTTAGCTAAGCAAGATGATGATTTAAATTaGAGATCAATATTGAAAGCGCATTGCTATATCCTGCTCACATTC | + |
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Preference number: 1 (lower is better) Translates to: LLLSKLLAKQDDDLN*RSILKAHCYILLTF Trigger: GAATGTGAGCAGGATATAGCAATGCGCTTTCAATATTGATCTTCAATTTAAATCATCATCTTGCTTAGCTAAAAGCTTACTCAGCAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCACTGCAGCCTTGGAAAGAGGTCCTTGAGCAGAACGGTGTGTCCTAACAAACACCCTGAGAAGCCTTaGCTGCGTGGGAAGGACATC | + |
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Preference number: 2 (lower is better) Translates to: AHCSLGKRSLSRTVCPNKHPEKP*LRGKDI Trigger: GATGTCCTTCCCACGCAGGCAAGGCTTCTCAGGGTG...TTTGTTAGGACACACCGTTCTGCTCAAGGACCTCTTTCCAAGGCTGCAGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGACACAGGCACCCCCTCTaGCCCTGCTCCTGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: RQKQNADVHFDAGDLLNRHRHPL*PCSCLL Trigger: GAGGAGACAGGAGCAGGGGCAGAGGGGGTGCCTGTG...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCTACTCTCTACCTGTTAGTTGGTGCAAGTaGTTCATAACAGCCAATTGT | + |
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Preference number: 2 (lower is better) Translates to: CSPTELPPNPTTPFYSLPVSWCK*FITANC Trigger: ACAATTGGCTGTTATGAATCACTTGCACCAACTAAC...AGGTAGAGAGTAGAAAGGGGTTGTGGGGTTAGGAGGCAGCTCAGTTGGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGAAGAAAAGACACAGTATaGGCACGCTTCTCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RQKQNADVHFDAGDLLNRRKDTV*ARFSPP Trigger: GGGAGGAGAGAAGCGTGCTCATACTGTGTCTTTTCT...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCACTGCAGCCTTGGAAAGAGGTCCTTGAGCAGAACGGTGTGTCCTAACAAATTTAAACAAGAGAACTaGTCAGGCAAGGAAGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: AHCSLGKRSLSRTVCPNKFKQEN*SGKEVE Trigger: TTCCACTTCCTTGCCTGAGCAGTTCTCTTGTTTAAA...TTTGTTAGGACACACCGTTCTGCTCAAGGACCTCTTTCCAAGGCTGCAGTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTGCTCAGGCAGATAAGAGGCCTCTCTaGGGACTTGAAGGGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: DREDSNLSTSLNKRTAQADKRPL*GLEGKH Trigger: GTGCTTCCCTTCAAGTCCTCAGAGAGGCCTCTTATC...TGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACAGTCTTTCCAAGTTTCTaGAGCCCAACTGAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PLKESCFNKLGKGVSLHTVFPSF*SPTELP Trigger: AGGCAGCTCAGTTGGGCTGCAGAAACTTGGAAAGAC...TGTGTGCAAGGAAACACCTTTTCCCAACTTGTTGAAACAGGATTCCTTCAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGAAATCATTCCACCCACTaGCACACACAAACCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: RQKQNADVHFDAGDLLNRNHSTH*HTQTHL Trigger: CAGATGGGTTTGTGTGTGGCAGTGGGTGGAATGATT...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACATGTGAGCTGAAACCCTaGGAATCATTCCTTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PLKESCFNKLGKGVSLHTCELKP*ESFLPS Trigger: TGAGGGAAGGAATGATTCTCAGGGTTTCAGCTCACA...TGTGTGCAAGGAAACACCTTTTCCCAACTTGTTGAAACAGGATTCCTTCAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR CCA 90 bp | AAATCCAGATCACAGAGTACCGTCAAAGTATTATTTGTTGGAGGACTAAACATCGGCCCACTGCAGCCTTaGAAAGAGGTCCTTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KSRSQSTVKVLFVGGLNIGPLQP*KEVLEQ Trigger: CTGCTCAAGGACCTCTTTCCAAGGCTGCAGTGGGCC...GATGTTTAGTCCTCCAACAAATAATACTTTGACGGTACTCTGTGATCTGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTGCTCAGGCAGGCAGCTCTAAGTGCTaGTTTCTGTGCAAACGGTTT | + |
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Preference number: 2 (lower is better) Translates to: DREDSNLSTSLNKRTAQAGSSKC*FLCKRF Trigger: AAACCGTTTGCACAGAAAGCAGCACTTAGAGCTGCC...TGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTGCTCAGGCAAGGGACAAAGTATTATaGTCTGCAGTCCCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: DREDSNLSTSLNKRTAQARDKVL*SAVPKS Trigger: GCTCTTGGGGACTGCAGAGCATAATACTTTGTCCCT...TGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | AAATCCAGATCACAGAGTACCGTCAAAGTATTATTTGTTGGAGGACTAAACATCCTGAGAAGCCTTGCCTaGGTGGGAAGGACATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KSRSQSTVKVLFVGGLNILRSLA*VGRTSG Trigger: TCCTGATGTCCTTCCCACGCAGGCAAGGCTTCTCAG...GATGTTTAGTCCTCCAACAAATAATACTTTGACGGTACTCTGTGATCTGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGAGGCAATATTAGTAAATaGTTCCAGAGATCTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RQKQNADVHFDAGDLLNRGNISK*FQRSLA Trigger: GGCAAGAGATCTCTGGAATCATTTACTAATATTGCC...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | GAACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCACTAGAAAAACAGTTACAAAAGATGCATaGAATCATTCCACCCACTGC | + |
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Preference number: 2 (lower is better) Translates to: EQTQQGCGSVILHSTRKTVTKDA*NHSTHC Trigger: GCAGTGGGTGGAATGATTGCATGCATCTTTTGTAAC...TGTTTTTCTAGTGGAATGGAGAATGACACTGCCACATCCTTGTTGGGTCTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATAAACACTCTCCCTTACTaGGCTACCAATCCACCTGTC | + |
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Preference number: 2 (lower is better) Translates to: PVAILSRTGRVLLKLQTINTLPY*ATNPPV Trigger: GACAGGTGGATTGGTAGCCCAGTAAGGGAGAGTGTT...TATAGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR CAA 90 bp | ACTTGTAAGAGGCAGGCAATATTAGTAAATGATTCCAGAGATCTCTaGCCTCTATCAACTAGGAAGACAGAGACTAGGGACTGGCAAATC | + |
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Preference number: 2 (lower is better) Translates to: TCKRQAILVNDSRDL*PLSTRKTETRDWQI Trigger: GATTTGCCAGTCCCTAGTCTCTGTCTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAATCATTTACTAATATTGCCTGCCTCTTACAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATATGCGTTTCTGTGAGCTaGAACCCTGAGAATCATTCC | + |
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Preference number: 2 (lower is better) Translates to: PVAILSRTGRVLLKLQTICVSVS*NPENHS Trigger: GGAATGATTCTCAGGGTTTCAGCTCACAGAAACGCA...TATAGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTCTTTTCCTATCCAGCTaGAGGGTACAGAATAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGLFLSS*RVQNRQ Trigger: CTGCCTATTCTGTACCCTGCAGCTGGATAGGAAAAG...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR GCA 90 bp | GAACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCACTAGAAAAACAATTCCAGAGATCTCTTaGCTCTATCAACTAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: EQTQQGCGSVILHSTRKTIPEIS*LYQLGR Trigger: TCTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAAT...TGTTTTTCTAGTGGAATGGAGAATGACACTGCCACATCCTTGTTGGGTCTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR GCA 72 bp | CACAGTATGAGCACGCTTCTCTCCTCCCAGGCCCACTaGAGCCTTGGAAAGAGGTCCTTGAGCAGAACGGTG | + |
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Preference number: 3 (lower is better) Translates to: HSMSTLLSSQAH*SLGKRSLSRTV Trigger: CACCGTTCTGCTCAAGGACCTCTTTCCAAGGCTGCAGTGGGCCTGGGAGGAGAGAAGCGTGCTCATACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 72 bp | GCAGAACGGTGTGTCCTAACAAACCAGGACTCAGAATaGGGTCTGCACACCCTGAGAAGCCTTGCCTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: AERCVLTNQDSE*GLHTLRSLACV Trigger: CACGCAGGCAAGGCTTCTCAGGGTGTGCAGACCTCATTCTGAGTCCTGGTTTGTTAGGACACACCGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 72 bp | CACCATAGGGACAAGTGCAATAGAAAAGACACAGTATaGGCACGCTTCTCTCCTCCCAGGCCCACTGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: HHRDKCNRKDTV*ARFSPPRPTAA Trigger: GGCTGCAGTGGGCCTGGGAGGAGAGAAGCGTGCTCATACTGTGTCTTTTCTATTGCACTTGTCCCTATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR CAA 90 bp | GAACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCACTAGAAAAACAAGCCCCCGTTCCCCCTaGGCCTGGGAATCCTATATA | + |
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Preference number: 3 (lower is better) Translates to: EQTQQGCGSVILHSTRKTSPRSP*AWESYI Trigger: TATATAGGATTCCCAGGCCAAGGGGGAACGGGGGCT...TGTTTTTCTAGTGGAATGGAGAATGACACTGCCACATCCTTGTTGGGTCTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR GCA 72 bp | CGAGTTACAAAAGATGCATGCAATCATTCCACCCACTaGCACACACAAACCCATCTGTGGCACCATAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: RVTKDACNHSTH*HTQTHLWHHRD Trigger: GTCCCTATGGTGCCACAGATGGGTTTGTGTGTGGCAGTGGGTGGAATGATTGCATGCATCTTTTGTAACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 72 bp | AAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTaGACAGACCCAACAAGGATGTGGCAGTGTCATTCT | + |
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Preference number: 3 (lower is better) Translates to: KMQTSTLMQETS*TDPTRMWQCHS Trigger: AGAATGACACTGCCACATCCTTGTTGGGTCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR CCA 72 bp | TTGCCTCTATCAACTAGGAAGACAGAGACTAGGGACTaGCAAATCACCATCTTCAGACTAAGGGCTGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: LPLSTRKTETRD*QITIFRLRAVF Trigger: GAACACAGCCCTTAGTCTGAAGATGGTGATTTGCCAGTCCCTAGTCTCTGTCTTCCTAGTTGATAGAGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR CCA 72 bp | AATCATTCCACCCACTGCCACACACAAACCCATCTGTaGCACCATAGGGACAAGTGCAATAGAAAAGACACA | + |
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Preference number: 3 (lower is better) Translates to: NHSTHCHTQTHL*HHRDKCNRKDT Trigger: TGTGTCTTTTCTATTGCACTTGTCCCTATGGTGCCACAGATGGGTTTGTGTGTGGCAGTGGGTGGAATGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 72 bp | AAACACAAGACAGAAACAAAATGCAGACGTCCACTTTaGTGCAGGAGACCTCCTGAACAGACCCAACAAGGA | + |
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Preference number: 3 (lower is better) Translates to: KHKTETKCRRPL*CRRPPEQTQQG Trigger: TCCTTGTTGGGTCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCTTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR CAA 90 bp | GACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTGCTCAGGCAGATTCCAGAGATCTCTaGCCTCTATCAACTAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: DREDSNLSTSLNKRTAQADSRDL*PLSTRK Trigger: CTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAATC...TGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR CAA 90 bp | GTATACTCTCTGACCCATGTTGCCTCAAACTTCAGTGTTAAGTTTTTGCACTTTGGAAAAGGTGTTTCCTaGCACACACCCATACACACA | + |
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Preference number: 3 (lower is better) Translates to: VYSLTHVASNFSVKFLHFGKGVS*HTPIHT Trigger: TGTGTGTATGGGTGTGTGCAAGGAAACACCTTTTCC...AAAGTGCAAAAACTTAACACTGAAGTTTGAGGCAACATGGGTCAGAGAGTATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 72 bp | AGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATATaGTCCCAAATGAAGTCTCTTGATAAGAGGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RTGRVLLKLQTI*SQMKSLDKRPL Trigger: GAGAGGCCTCTTATCAAGAGACTTCATTTGGGATCATATAGTTTGTAACTTTAACAACACCCTCCCAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR CAA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTATTCATAACAGCCAATaGTTTATTTCCACTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGIHNSQ*FISTAL Trigger: CAGGGCAGTGGAAATAAACAATTGGCTGTTATGAAT...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR TCA 72 bp | TTTCTGGTGTTGAAAATCAACAGCGAGTATACTCTCTaGCCCATGTTGCCTCAAACTTCAGTGTTAAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: FLVLKINSEYTL*PMLPQTSVLSF Trigger: AAAACTTAACACTGAAGTTTGAGGCAACATGGGTCAGAGAGTATACTCGCTGTTGATTTTCAACACCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| 3UTR-3UTR CAA 90 bp | GTATACTCTCTGACCCATGTTGCCTCAAACTTCAGTGTTAAGTTTTTGCACTTTAGAACTGGGAGGGTGTaGTTAAAGTTACAAACTATA | + |
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Preference number: 3 (lower is better) Translates to: VYSLTHVASNFSVKFLHFRTGRV*LKLQTI Trigger: TATAGTTTGTAACTTTAACAACACCCTCCCAGTTCT...AAAGTGCAAAAACTTAACACTGAAGTTTGAGGCAACATGGGTCAGAGAGTATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR TCA 90 bp | GCCCACTGCAGCCTTGGAAAGAGGTCCTTGAGCAGAACGGTGTGTCCTAACAAATCCAGGCCCCGCCGCTaGAGCTCCGACCGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: AHCSLGKRSLSRTVCPNKSRPRR*SSDRSS Trigger: CGAGCTGCGGTCGGAGCTTCAGCGGCGGGGCCTGGA...TTTGTTAGGACACACCGTTCTGCTCAAGGACCTCTTTCCAAGGCTGCAGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR GCA 90 bp | TGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCTACTCTCTACCTGGCCTTGTCACCCGGTaGCTCGGATCCCGGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: CSPTELPPNPTTPFYSLPGLVTR*LGSRSL Trigger: GAGACTCCGGGATCCGAGGCACCGGGTGACAAGGCC...AGGTAGAGAGTAGAAAGGGGTTGTGGGGTTAGGAGGCAGCTCAGTTGGGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR GCA 90 bp | TGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCTACTCTCTACCTCATCTCAGCATCCAGTaGCTCCTGAAGACGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: CSPTELPPNPTTPFYSLPHLSIQ*LLKTLR Trigger: GCGCAGCGTCTTCAGGAGGCACTGGATGCTGAGATG...AGGTAGAGAGTAGAAAGGGGTTGTGGGGTTAGGAGGCAGCTCAGTTGGGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CCA 90 bp | AATGATTCCAGAGATCTCTTGCCTCTATCAACTAGGAAGACAGAGACTAGGGACCACCTGACCCAGCCGTaGCCTCCGCCGGTGTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: NDSRDLLPLSTRKTETRDHLTQP*PPPVCR Trigger: CCGACACACCGGCGGAGGCCACGGCTGGGTCAGGTG...GTCCCTAGTCTCTGTCTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAATCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR TCA 90 bp | CCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACAGCCTGGCCCAAAGCCTaGGCAGGTGGTGGTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLKESCFNKLGKGVSLHTAWPKA*AGGGSS Trigger: CGAGGAACCACCACCTGCTCAGGCTTTGGGCCAGGC...TGTGTGCAAGGAAACACCTTTTCCCAACTTGTTGAAACAGGATTCCTTCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | AATCATTCCTTCCCTCACACTTGTAAGAGGCAGGCAATATTAGTAAATGATTCCCTCGGCCTCCATGGCTaGCGTCTCCGGGGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NHSFPHTCKRQAILVNDSLGLHG*RLRGLR Trigger: CCGGAGCCCCCGGAGACGTCAGCCATGGAGGCCGAG...GGAATCATTTACTAATATTGCCTGCCTCTTACAAGTGTGAGGGAAGGAATGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | GAACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCACTAGAAAAACAACCATTTACCCCACCTaGCCCAGCCGTGGCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EQTQQGCGSVILHSTRKTTIYPT*PSRGLR Trigger: GCGGAGGCCACGGCTGGGTCAGGTGGGGTAAATGGT...TGTTTTTCTAGTGGAATGGAGAATGACACTGCCACATCCTTGTTGGGTCTGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCTACTCTCTACCTTTTGGGGTCCATCTCTaGCTCCTCAAGTCCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSPTELPPNPTTPFYSLPFGVHL*LLKSLH Trigger: ATGAAGGGACTTGAGGAGCCAGAGATGGACCCCAAA...AGGTAGAGAGTAGAAAGGGGTTGTGGGGTTAGGAGGCAGCTCAGTTGGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCTACTCTCTACCTTCCTGGAGAATGTCTTaGACAGCAGTAACTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSPTELPPNPTTPFYSLPSWRMS*TAVTSF Trigger: GAAGGAAGTTACTGCTGTTCAAGACATTCTCCAGGA...AGGTAGAGAGTAGAAAGGGGTTGTGGGGTTAGGAGGCAGCTCAGTTGGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | CTATCAACTAGGAAGACAGAGACTAGGGACTGGCAAATCACCATCTTCAGACTAGGTCTTGGGAGGGACTaGAGTCCGCACACGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTRKTETRDWQITIFRLGLGRD*SPHTFL Trigger: GAGGAACGTGTGCGGACTGCAGTCCCTCCCAAGACC...TAGTCTGAAGATGGTGATTTGCCAGTCCCTAGTCTCTGTCTTCCTAGTTGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCTACTCTCTACCTTTTTGCGTATTTCAGTaGCCACTGGGTCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSPTELPPNPTTPFYSLPFCVFQ*PLGLSR Trigger: TCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAA...AGGTAGAGAGTAGAAAGGGGTTGTGGGGTTAGGAGGCAGCTCAGTTGGGCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGACCTCGGCTTCGGTTCTaGCGGTTTCTCTTGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RQKQNADVHFDAGDLLNRPRLRF*RFLLLR Trigger: CCGCAACAAGAGAAACCGGCAGAACCGAAGCCGAGG...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | AATCATTCCTTCCCTCACACTTGTAAGAGGCAGGCAATATTAGTAAATGATTCCCGGACTCGGCCTCCATaGCTGACGTCTCCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHSFPHTCKRQAILVNDSRTRPP*LTSPGA Trigger: AGCCCCCGGAGACGTCAGCCATGGAGGCCGAGTCCG...GGAATCATTTACTAATATTGCCTGCCTCTTACAAGTGTGAGGGAAGGAATGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | AATGATTCCAGAGATCTCTTGCCTCTATCAACTAGGAAGACAGAGACTAGGGACGGTAGGGAACTTTTCTaGGAAGAGCGGCTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDSRDLLPLSTRKTETRDGRELF*EERLAS Trigger: GGAGGCCAGCCGCTCTTCTCAGAAAAGTTCCCTACC...GTCCCTAGTCTCTGTCTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | AATCATTCCTTCCCTCACACTTGTAAGAGGCAGGCAATATTAGTAAATGATTCCGCATCCAGTGCCTCCTaGAGACGCTGCGCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NHSFPHTCKRQAILVNDSASSAS*RRCARS Trigger: GGATCTGGCGCAGCGTCTTCAGGAGGCACTGGATGC...GGAATCATTTACTAATATTGCCTGCCTCTTACAAGTGTGAGGGAAGGAATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGACCCTTGCCGTTGTCATaGTCTTCGCCACCATTTACC | + |
|
Preference number: 4 (lower is better) Translates to: RQKQNADVHFDAGDLLNRPLPLS*SSPPFT Trigger: GGTAAATGGTGGCGAAGAGCATGACAACGGCAAGGG...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | CAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTCCTCTGTTTCCAGACTaGCCCCAGTACTGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QPVAILSRTGRVLLKLQTPLFPD*PQYCCP Trigger: CGGGCAGCAGTACTGGGGGCAGTCTGGAAACAGAGG...AGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | GAATTTACTGAATATAATATAGATAGGGACAAAGTATTATGCTCTGCAGTCCCCGCGCCAGATCCATTTTaGGGCCGCGCGAATCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EFTEYNIDRDKVLCSAVPAPDPF*GRANPG Trigger: GCCTGGATTCGCGCGGCCTCAAAATGGATCTGGCGC...GGGGACTGCAGAGCATAATACTTTGTCCCTATCTATATTATATTCAGTAAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | AATGATTCCAGAGATCTCTTGCCTCTATCAACTAGGAAGACAGAGACTAGGGACCACAAACTCTTCTGGTaGTGGGAAAAAGGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NDSRDLLPLSTRKTETRDHKLFW*WEKGLL Trigger: GAGGAGCCCTTTTTCCCACCACCAGAAGAGTTTGTG...GTCCCTAGTCTCTGTCTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | CAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTAGAGGTCTCGGCTTTTaGGGTCCATCTCTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPVAILSRTGRVLLKLQTRGLGF*GPSLAP Trigger: AGGAGCCAGAGATGGACCCCAAAAGCCGAGACCTCT...AGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | CCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACATCCATAAGTACTTCTTaGCCCAGACCAAAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLKESCFNKLGKGVSLHTSISTS*PRPKGR Trigger: CCTACCCTTTGGTCTGGGGCAAGAAGTACTTATGGA...TGTGTGCAAGGAAACACCTTTTCCCAACTTGTTGAAACAGGATTCCTTCAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGAAGGTTCACAAGCGTCTaGTCCTCCTCTTCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQKQNADVHFDAGDLLNRRFTSV*SSSSSF Trigger: AAAAGATGAAGAGGAGGACCAGACGCTTGTGAACCT...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTACTCCTCTATGGTCTTaGGAGGGACTGCAGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGTPLWS*EGLQSA Trigger: TGCGGACTGCAGTCCCTCCCAAGACCATAGAGGAGT...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CCA 90 bp | GTATACTCTCTGACCCATGTTGCCTCAAACTTCAGTGTTAAGTTTTTGCACTTTCCTCACACTCCTCTATaGTCTTGGGAGGGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYSLTHVASNFSVKFLHFPHTPL*SWEGLQ Trigger: CTGCAGTCCCTCCCAAGACCATAGAGGAGTGTGAGG...AAAGTGCAAAAACTTAACACTGAAGTTTGAGGCAACATGGGTCAGAGAGTATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | AATGATTCCAGAGATCTCTTGCCTCTATCAACTAGGAAGACAGAGACTAGGGACGATCGTGAAGCAATCTaGACCAGCTTACTAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NDSRDLLPLSTRKTETRDDREAI*TSLLRH Trigger: GTGCCTTAGTAAGCTGGTCCAGATTGCTTCACGATC...GTCCCTAGTCTCTGTCTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CCA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGACAGGCAGAGAGAAGTTaGCTTTCATCTCCAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RQKQNADVHFDAGDLLNRQAERS*LSSPAL Trigger: TAATGCTGGAGATGAAAGCCAACTTCTCTCTGCCTG...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR TCA 90 bp | AATCATTCCTTCCCTCACACTTGTAAGAGGCAGGCAATATTAGTAAATGATTCCGCCCGTTTTCTGCCTTaGGTCCTCTTCCGTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NHSFPHTCKRQAILVNDSARFLP*VLFRQN Trigger: GTTTTGACGGAAGAGGACTCAAGGCAGAAAACGGGC...GGAATCATTTACTAATATTGCCTGCCTCTTACAAGTGTGAGGGAAGGAATGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | GAACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCACTAGAAAAACAAAGGGCTCCTCCTTCTaGCCAAAGTTTAATTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: EQTQQGCGSVILHSTRKTKGSSF*PKFNST Trigger: CGTAGAATTAAACTTTGGTCAGAAGGAGGAGCCCTT...TGTTTTTCTAGTGGAATGGAGAATGACACTGCCACATCCTTGTTGGGTCTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR TCA 90 bp | CAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTCAGGCACAGCATGGATaGACACAAACTCTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPVAILSRTGRVLLKLQTQAQHG*TQTLLV Trigger: CACCAGAAGAGTTTGTGTTCATCCATGCTGTGCCTG...AGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CCA 90 bp | CCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACATTCTCCCCAAAAGTCTaGCCAAATTCCTCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLKESCFNKLGKGVSLHTFSPKV*PNSSNC Trigger: GCAGTTTGAGGAATTTGGCCAGACTTTTGGGGAGAA...TGTGTGCAAGGAAACACCTTTTCCCAACTTGTTGAAACAGGATTCCTTCAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR TCA 90 bp | CCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACATTCATTGGGAGATTCTaGGTTACCTTGGCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLKESCFNKLGKGVSLHTFIGRF*VTLASK Trigger: CTTTGAAGCCAAGGTAACTCAGAATCTCCCAATGAA...TGTGTGCAAGGAAACACCTTTTCCCAACTTGTTGAAACAGGATTCCTTCAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR TCA 90 bp | AATCATTCCTTCCCTCACACTTGTAAGAGGCAGGCAATATTAGTAAATGATTCCTCATCCTCATTTGCGTaGGAACAGTCTCAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NHSFPHTCKRQAILVNDSSSSFA*EQSQLP Trigger: TGGGAGCTGAGACTGTTCTCACGCAAATGAGGATGA...GGAATCATTTACTAATATTGCCTGCCTCTTACAAGTGTGAGGGAAGGAATGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR TCA 90 bp | GAATTTACTGAATATAATATAGATAGGGACAAAGTATTATGCTCTGCAGTCCCCCACTGGGAGGCTTGCTaGACTAAGAGGTCTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFTEYNIDRDKVLCSAVPHWEAC*TKRSRL Trigger: AAGCCGAGACCTCTTAGTTCAGCAAGCCTCCCAGTG...GGGGACTGCAGAGCATAATACTTTGTCCCTATCTATATTATATTCAGTAAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | CAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTCTCAGGGTTGTCTTTTaGGTATTTCAGTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QPVAILSRTGRVLLKLQTLRVVF*VFQCPL Trigger: CAGTGGGCACTGAAATACGCAAAAGACAACCCTGAG...AGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | CAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTCCCTTCATCCTCATTTaGGTGAGAACAGTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPVAILSRTGRVLLKLQTPFILI*VRTVSA Trigger: AGCTGAGACTGTTCTCACGCAAATGAGGATGAAGGG...AGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | CAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTTATTTCAGTGCCCACTaGGTCTTTCCAGATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPVAILSRTGRVLLKLQTYFSAH*VFPDPG Trigger: TCCTGGATCTGGAAAGACCCAGTGGGCACTGAAATA...AGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | GACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTGCTCAGGCATTAGTAACAATGGGTTaGGCTTCCTCTTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DREDSNLSTSLNKRTAQALVTMG*ASSFSS Trigger: GCTGGAAAAAGAGGAAGCTCAACCCATTGTTACTAA...TGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATAGGAGAGAGACTTCTGTaGAGCCTTCTTTCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVAILSRTGRVLLKLQTIGERLL*SLLSLG Trigger: TCCCAATGAAAGAAGGCTGCACAGAAGTCTCTCTCC...TATAGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | CAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTCCAAATTCCTCAAACTaGCCGTTTTCTGCCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPVAILSRTGRVLLKLQTPNSSN*PFSALS Trigger: ACTCAAGGCAGAAAACGGGCAGTTTGAGGAATTTGG...AGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | CTATCAACTAGGAAGACAGAGACTAGGGACTGGCAAATCACCATCTTCAGACTAGACTTTTCACTATCTTaGTCATCTCCTTGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTRKTETRDWQITIFRLDFSLS*SSPCSS Trigger: AGAGGAACAAGGAGATGACCAAGATAGTGAAAAGTC...TAGTCTGAAGATGGTGATTTGCCAGTCCCTAGTCTCTGTCTTCCTAGTTGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTCTACGACACAATTCTTaGAAAGGACATGGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGLRHNS*KGHGVE Trigger: TTCTACCCCATGTCCTTTGCAAGAATTGTGTCGTAG...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | GAATTTACTGAATATAATATAGATAGGGACAAAGTATTATGCTCTGCAGTCCCCTTCTTGCAAAGGACATaGGGTAGAAGGGCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: EFTEYNIDRDKVLCSAVPFLQRT*GRRARS Trigger: AGATCGAGCCCTTCTACCCCATGTCCTTTGCAAGAA...GGGGACTGCAGAGCATAATACTTTGTCCCTATCTATATTATATTCAGTAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| 3UTR CAA 72 bp | AGAGATTTTCTCACCAGGAAGTGTTGTAGGATGCTGTaGCTGAGTAAGCTTTTAGCTAAGCAAGATGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RDFLTRKCCRML*LSKLLAKQDDD Trigger: ATCATCATCTTGCTTAGCTAAAAGCTTACTCAGCAACAGCATCCTACAACACTTCCTGGTGAGAAAATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR TCA 90 bp | AAATCCAGATCACAGAGTACCGTCAAAGTATTATTTGTTGGAGGACTAAACATCGTCTTCACCAAGCTGTaGACAGGAAAAATCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSRSQSTVKVLFVGGLNIVFTKL*TGKINR Trigger: TCTGTTGATTTTTCCTGTTCACAGCTTGGTGAAGAC...GATGTTTAGTCCTCCAACAAATAATACTTTGACGGTACTCTGTGATCTGGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTAGTCTTCTCCATTCTTaGAGAAGGAAAGCTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGSLLHS*RRKAQL Trigger: AAGTTGAGCTTTCCTTCTCCAAGAATGGAGAAGACT...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTAGTAACTTCCTTCGTTaGCCAGAGTTGTACACATTA | + |
|
Preference number: 4 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGSNFLR*PELYTL Trigger: TAATGTGTACAACTCTGGCCAACGAAGGAAGTTACT...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR GCA 90 bp | AAATCCAGATCACAGAGTACCGTCAAAGTATTATTTGTTGGAGGACTAAACATCCTCCATATCGGTCTTTaGTTATTTGAAAATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSRSQSTVKVLFVGGLNILHIGL*LFENGD Trigger: ATCTCCATTTTCAAATAAGCAAAGACCGATATGGAG...GATGTTTAGTCCTCCAACAAATAATACTTTGACGGTACTCTGTGATCTGGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| 3UTR CAA 72 bp | TTTATTCTAAAACTGGAACTACTGTGTCTACATTTTTaGCCAGAATGGTGTAATGAGAACAGGGTAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FILKLELLCLHF*PEWCNENRVRV Trigger: AACTCTTACCCTGTTCTCATTACACCATTCTGGCAAAAAATGTAGACACAGTAGTTCCAGTTTTAGAATAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CCA 90 bp | CCGTGGCCTCCGCCGGTGTGTCGGAAGCTTCGGACTCGGCCTCCATaGCTGACGTCTCCGGGGGCTCCGGAGGCGGCTGCGCGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PWPPPVCRKLRTRPP*LTSPGAPEAAARPG Trigger: GCCAGGCCGCGCAGCCGCCTCCGGAGCCCCCGGAGACGTCAGCCATGGAGGCCGAGTCCGAAGCTTCCGACACACCGGCGGAGGCCACGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 90 bp | TGCGCCAGATCCATTTTGAGGCCGCGCGAATCCAGGCCCCGCCGCTaGAGCTCCGACCGCAGCTCGGTCACTTTCAGCCGCTTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CARSILRPRESRPRR*SSDRSSVTFSRFTS Trigger: GGAGGTGAAGCGGCTGAAAGTGACCGAGCTGCGGTCGGAGCTTCAGCGGCGGGGCCTGGATTCGCGCGGCCTCAAAATGGATCTGGCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 90 bp | TCTCAGCATCCAGTGCCTCCTGAAGACGCTGCGCCAGATCCATTTTaGGGCCGCGCGAATCCAGGCCCCGCCGCTGAAGCTCCGACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQHPVPPEDAAPDPF*GRANPGPAAEAPTA Trigger: TGCGGTCGGAGCTTCAGCGGCGGGGCCTGGATTCGCGCGGCCTCAAAATGGATCTGGCGCAGCGTCTTCAGGAGGCACTGGATGCTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 90 bp | CTCCCCCTTGCCGTTGTCATGCTCTTCGCCACCATTTACCCCACCTaGCCCAGCCGTGGCCTCCGCCGGTGTGTCGGAAGCTTCGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLAVVMLFATIYPT*PSRGLRRCVGSFGL Trigger: GAGTCCGAAGCTTCCGACACACCGGCGGAGGCCACGGCTGGGTCAGGTGGGGTAAATGGTGGCGAAGAGCATGACAACGGCAAGGGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CCA 90 bp | CGTTGTCATGCTCTTCGCCACCATTTACCCCACCTGACCCAGCCGTaGCCTCCGCCGGTGTGTCGGAAGCTTCGGACTCGGCCTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RCHALRHHLPHLTQP*PPPVCRKLRTRPPW Trigger: CCATGGAGGCCGAGTCCGAAGCTTCCGACACACCGGCGGAGGCCACGGCTGGGTCAGGTGGGGTAAATGGTGGCGAAGAGCATGACAACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS GCA 90 bp | GAGTCTCGTCTCCGCTCCGTTCCTCCGGCCCGTCTTCCTCCCCCTTaGCGTTGTCATGCTCTTCGCCACCATTTACCCCACCTGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESRLRSVPPARLPPP*RCHALRHHLPHLTQ Trigger: CTGGGTCAGGTGGGGTAAATGGTGGCGAAGAGCATGACAACGGCAAGGGGGAGGAAGACGGGCCGGAGGAACGGAGCGGAGACGAGACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS GCA 90 bp | ACTATCTTGGTCATCTCCTTGTTCCTCTACGGCCTTGTCACCCGGTaGCTCGGATCCCGGAGTCTCGTCTCCGCTCCGTTCCTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TILVISLFLYGLVTR*LGSRSLVSAPFLRP Trigger: GGGCCGGAGGAACGGAGCGGAGACGAGACTCCGGGATCCGAGGCACCGGGTGACAAGGCCGTAGAGGAACAAGGAGATGACCAAGATAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CCA 90 bp | TTGGGAGGGACTGCAGTCCGCACACGTTCCTCAACAGGCACAGCATaGATGAACACAAACTCTTCTGGTGGTGGGAAAAAGGGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGGTAVRTRSSTGTA*MNTNSSGGGKKGSS Trigger: GGAGGAGCCCTTTTTCCCACCACCAGAAGAGTTTGTGTTCATCCATGCTGTGCCTGTTGAGGAACGTGTGCGGACTGCAGTCCCTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CCA 90 bp | CAGGAAGTCCCACCATCAGAATCACCTCACACTCCTCTATGGTCTTaGGAGGGACTGCAGTCCGCACACGTTCCTCAACAGGCACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QEVPPSESPHTPLWS*EGLQSAHVPQQAQH Trigger: ATGCTGTGCCTGTTGAGGAACGTGTGCGGACTGCAGTCCCTCCCAAGACCATAGAGGAGTGTGAGGTGATTCTGATGGTGGGACTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | GCCCACTGCAGCCTTGGAAAGAGGTCCTTGAGCAGAACGGTGTGTCCTAACAAATTCTGCCGGTTTCTCTaGTTGCGGTTGTTCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHCSLGKRSLSRTVCPNKFCRFL*LRLFRR Trigger: CCGCCGGAACAACCGCAACAAGAGAAACCGGCAGAA...TTTGTTAGGACACACCGTTCTGCTCAAGGACCTCTTTCCAAGGCTGCAGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 90 bp | GAGGGACTGCAGTCCGCACACGTTCCTCAACAGGCACAGCATGGATaGACACAAACTCTTCTGGTGGTGGGAAAAAGGGCTCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGLQSAHVPQQAQHG*TQTLLVVGKRAPPS Trigger: AGAAGGAGGAGCCCTTTTTCCCACCACCAGAAGAGTTTGTGTTCATCCATGCTGTGCCTGTTGAGGAACGTGTGCGGACTGCAGTCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 90 bp | CGTGAAGCAATCTGGACCAGCTTACTAAGGCACTGGGAGGCTTGCTaGACTAAGAGGTCTCGGCTTTTGGGGTCCATCTCTGGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: REAIWTSLLRHWEAC*TKRSRLLGSISGSS Trigger: TGAGGAGCCAGAGATGGACCCCAAAAGCCGAGACCTCTTAGTTCAGCAAGCCTCCCAGTGCCTTAGTAAGCTGGTCCAGATTGCTTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS GCA 90 bp | CACCATCAGAATCACCTCACACTCCTCTATGGTCTTGGGAGGGACTaGAGTCCGCACACGTTCCTCAACAGGCACAGCATGGATGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HHQNHLTLLYGLGRD*SPHTFLNRHSMDEH Trigger: GTGTTCATCCATGCTGTGCCTGTTGAGGAACGTGTGCGGACTGCAGTCCCTCCCAAGACCATAGAGGAGTGTGAGGTGATTCTGATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCTACTCTCTACCTTGCCCGTTTTCTGCCTaGAGTCCTCTTCCGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CSPTELPPNPTTPFYSLPCPFSA*SPLPSK Trigger: TTTTGACGGAAGAGGACTCAAGGCAGAAAACGGGCA...AGGTAGAGAGTAGAAAGGGGTTGTGGGGTTAGGAGGCAGCTCAGTTGGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | AATGATTCCAGAGATCTCTTGCCTCTATCAACTAGGAAGACAGAGACTAGGGACTCCTCCCCCTTGCCGTaGTCATGCTCTTCGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NDSRDLLPLSTRKTETRDSSPLP*SCSSPP Trigger: TGGTGGCGAAGAGCATGACAACGGCAAGGGGGAGGA...GTCCCTAGTCTCTGTCTTCCTAGTTGATAGAGGCAAGAGATCTCTGGAATCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | GAACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCACTAGAAAAACACACTCCTCTATGGTCTaGGGAGGGACTGCAGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EQTQQGCGSVILHSTRKTHSSMV*GGTAVR Trigger: GCGGACTGCAGTCCCTCCCAAGACCATAGAGGAGTG...TGTTTTTCTAGTGGAATGGAGAATGACACTGCCACATCCTTGTTGGGTCTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS GCA 90 bp | AGTCTCAGCTCCCAGAACATTGTATCTTCTCTCAGGGTTGTCTTTTaGGTATTTCAGTGCCCACTGGGTCTTTCCAGATCCAGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSQNIVSSLRVVF*VFQCPLGLSRSRKS Trigger: GGACTTCCTGGATCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAATGTTCTGGGAGCTGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | GCCCACTGCAGCCTTGGAAAGAGGTCCTTGAGCAGAACGGTGTGTCCTAACAAATCGGTCTTTGCTTATTaGAAAATGGAGATCCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AHCSLGKRSLSRTVCPNKSVFAY*KMEIRG Trigger: ACCTCGGATCTCCATTTTCAAATAAGCAAAGACCGA...TTTGTTAGGACACACCGTTCTGCTCAAGGACCTCTTTCCAAGGCTGCAGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | AAATCCAGATCACAGAGTACCGTCAAAGTATTATTTGTTGGAGGACTAAACATCCCCGCCCACATAGCCTaGGCCTCGGCTTCGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSRSQSTVKVLFVGGLNIPAHIA*ASASVL Trigger: CAGAACCGAAGCCGAGGCCAAGGCTATGTGGGCGGG...GATGTTTAGTCCTCCAACAAATAATACTTTGACGGTACTCTGTGATCTGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 90 bp | TTTTCTGAGAAGAGCGGCTGGCCTCCATATCGGTCTTTGCTTATTTaGAAATGGAGATCCGAGGTATACGTGTCCAGGTTCACAAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSEKSGWPPYRSLLI*KWRSEVYVSRFTSV Trigger: GACGCTTGTGAACCTGGACACGTATACCTCGGATCTCCATTTTCAAATAAGCAAAGACCGATATGGAGGCCAGCCGCTCTTCTCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 90 bp | TCCTCTTCCGTCAAAACCGTAGGAGAACTCGTCTTCACCAAGCTGTaGACAGGAAAAATCAACAGACCACCCAACTCTAAGGAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSVKTVGELVFTKL*TGKINRPPNSKERD Trigger: GTCTCTCTCCTTAGAGTTGGGTGGTCTGTTGATTTTTCCTGTTCACAGCTTGGTGAAGACGAGTTCTCCTACGGTTTTGACGGAAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CCA 90 bp | TTGTATCTTCTCTCAGGGTTGTCTTTTGCGTATTTCAGTGCCCACTaGGTCTTTCCAGATCCAGGAAGTCCCACCATCAGAATCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYLLSGLSFAYFSAH*VFPDPGSPTIRITS Trigger: TGAGGTGATTCTGATGGTGGGACTTCCTGGATCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 90 bp | TCCATAAGTACTTCTTGCCCCAGACCAAAGGGTAGGGAACTTTTCTaGGAAGAGCGGCTGGCCTCCATATCGGTCTTTGCTTATTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SISTSCPRPKGRELF*EERLASISVFAYLK Trigger: TTTCAAATAAGCAAAGACCGATATGGAGGCCAGCCGCTCTTCTCAGAAAAGTTCCCTACCCTTTGGTCTGGGGCAAGAAGTACTTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS GCA 90 bp | CAGAACATTGTATCTTCTCTCAGGGTTGTCTTTTGCGTATTTCAGTaGCCACTGGGTCTTTCCAGATCCAGGAAGTCCCACCATCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QNIVSSLRVVFCVFQ*PLGLSRSRKSHHQN Trigger: ATTCTGATGGTGGGACTTCCTGGATCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAATGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | CTATCAACTAGGAAGACAGAGACTAGGGACTGGCAAATCACCATCTTCAGACTAATCTTGGTCATCTCCTaGTTCCTCTACGGCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSTRKTETRDWQITIFRLILVIS*FLYGLV Trigger: GACAAGGCCGTAGAGGAACAAGGAGATGACCAAGAT...TAGTCTGAAGATGGTGATTTGCCAGTCCCTAGTCTCTGTCTTCCTAGTTGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTAAGAGGTCTCGGCTTTaGGGGTCCATCTCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGKRSRL*GSISGS Trigger: GGAGCCAGAGATGGACCCCAAAAGCCGAGACCTCTT...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 90 bp | GGCAGTAGCTTCCTTGCTTCCTCCTTGTATTTAGTAACAATGGGTTaGGCTTCCTCTTTTTCCAGCTCCCCATATGTCACCTCATCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GSSFLASSLYLVTMG*ASSFSSSPYVTSSI Trigger: TATGGATGAGGTGACATATGGGGAGCTGGAAAAAGAGGAAGCTCAACCCATTGTTACTAAATACAAGGAGGAAGCAAGGAAGCTACTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | GAATTTACTGAATATAATATAGATAGGGACAAAGTATTATGCTCTGCAGTCCCCTGCGCCAGATCCATTTaGAGGCCGCGCGAATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EFTEYNIDRDKVLCSAVPCARSI*RPRESR Trigger: CCTGGATTCGCGCGGCCTCAAAATGGATCTGGCGCA...GGGGACTGCAGAGCATAATACTTTGTCCCTATCTATATTATATTCAGTAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | CCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACATCTACGACACAATTCTaGCAAAGGACATGGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLKESCFNKLGKGVSLHTSTTQF*QRTWGR Trigger: TCTACCCCATGTCCTTTGCAAGAATTGTGTCGTAGA...TGTGTGCAAGGAAACACCTTTTCCCAACTTGTTGAAACAGGATTCCTTCAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | GACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTGCTCAGGCATCTCAGGGTTGTCTTTaGCGTATTTCAGTGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DREDSNLSTSLNKRTAQASQGCL*RISVPT Trigger: AGTGGGCACTGAAATACGCAAAAGACAACCCTGAGA...TGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGACCAATCCCGGTTGTATaGTCTGTAATAGTCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RQKQNADVHFDAGDLLNRPIPVV*SVIVSV Trigger: TACAGAGACTATTACAGACAATACAACCGGGATTGG...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 90 bp | ATGAACACAAACTCTTCTGGTGGTGGGAAAAAGGGCTCCTCCTTCTaGCCAAAGTTTAATTCTACGACACAATTCTTGCAAAGGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: MNTNSSGGGKKGSSF*PKFNSTTQFLQRTW Trigger: CCATGTCCTTTGCAAGAATTGTGTCGTAGAATTAAACTTTGGTCAGAAGGAGGAGCCCTTTTTCCCACCACCAGAAGAGTTTGTGTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | CCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATATCCCTTCATCCTCATTaGCGTGAGAACAGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVAILSRTGRVLLKLQTISLHPH*RENSLS Trigger: GCTGAGACTGTTCTCACGCAAATGAGGATGAAGGGA...TATAGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | AGACAGAAACAAAATGCAGACGTCCACTTTGATGCAGGAGACCTCCTGAACAGATTCCTTGCTTCCTCCTaGTATTTAGTAACAATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RQKQNADVHFDAGDLLNRFLASS*YLVTMG Trigger: ACCCATTGTTACTAAATACAAGGAGGAAGCAAGGAA...TCTGTTCAGGAGGTCTCCTGCATCAAAGTGGACGTCTGCATTTTGTTTCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | CCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATACCTCCTCTTCATCTTTaGCTTCTTCTTCTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVAILSRTGRVLLKLQTIPPLHL*LLLLEV Trigger: CACCTCCAGAAGAAGAAGCAAAAGATGAAGAGGAGG...TATAGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCACAATATAAGTGGACAATCTATTACCTCAATAGCCCAAGAAGGAAAGGTCTGAGCCTGCTGGTTTaGACTTTTCACTATCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KAQYKWTIYYLNSPRRKGLSLLV*TFHYLG Trigger: ACCAAGATAGTGAAAAGTCAAAACCAGCAGGCTCAG...ACCTTTCCTTCTTGGGCTATTGAGGTAATAGATTGTCCACTTATATTGTGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | GACAGGGAAGATTCAAATCTCAGCACAAGTTTAAACAAGAGAACTGCTCAGGCAAGCATACTTTTCCCTTaGTTACTCCATAAGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DREDSNLSTSLNKRTAQASILFP*LLHKYF Trigger: GAAGTACTTATGGAGTAACAAAGGGAAAAGTATGCT...TGCCTGAGCAGTTCTCTTGTTTAAACTTGTGCTGAGATTTGAATCTTCCCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS-3UTR CAA 90 bp | GAATTTACTGAATATAATATAGATAGGGACAAAGTATTATGCTCTGCAGTCCCCTCGGTCTCTGTCCTGTaGGTGGTGGTAGTAGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: EFTEYNIDRDKVLCSAVPSVSVL*VVVVVI Trigger: AATTACTACTACCACCACCAACAGGACAGAGACCGA...GGGGACTGCAGAGCATAATACTTTGTCCCTATCTATATTATATTCAGTAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS-3UTR CAA 90 bp | CCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATATATCTTCTCTCAGGGTaGTCTTTTGCGTATTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVAILSRTGRVLLKLQTIYLLSG*SFAYFS Trigger: ACTGAAATACGCAAAAGACAACCCTGAGAGAAGATA...TATAGTTTGTAACTTTAACAACACCCTCCCAGTTCTTGACAGAATAGCTACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CCA 72 bp | CCGCCGGTGTGTCGGAAGCTTCGGACTCGGCCTCCATaGCTGACGTCTCCGGGGGCTCCGGAGGCGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPVCRKLRTRPP*LTSPGAPEAAA Trigger: CGCAGCCGCCTCCGGAGCCCCCGGAGACGTCAGCCATGGAGGCCGAGTCCGAAGCTTCCGACACACCGGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CCA 72 bp | GCTCTTCGCCACCATTTACCCCACCTGACCCAGCCGTaGCCTCCGCCGGTGTGTCGGAAGCTTCGGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRHHLPHLTQP*PPPVCRKLRTR Trigger: CCGAGTCCGAAGCTTCCGACACACCGGCGGAGGCCACGGCTGGGTCAGGTGGGGTAAATGGTGGCGAAGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 72 bp | CCAGTGCCTCCTGAAGACGCTGCGCCAGATCCATTTTaGGGCCGCGCGAATCCAGGCCCCGCCGCTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVPPEDAAPDPF*GRANPGPAAEA Trigger: AGCTTCAGCGGCGGGGCCTGGATTCGCGCGGCCTCAAAATGGATCTGGCGCAGCGTCTTCAGGAGGCACTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS TCA 72 bp | GCCGTTGTCATGCTCTTCGCCACCATTTACCCCACCTaGCCCAGCCGTGGCCTCCGCCGGTGTGTCGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVVMLFATIYPT*PSRGLRRCVGS Trigger: GCTTCCGACACACCGGCGGAGGCCACGGCTGGGTCAGGTGGGGTAAATGGTGGCGAAGAGCATGACAACGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CAA 90 bp | TCGTCTCCGCTCCGTTCCTCCGGCCCGTCTTCCTCCCCCTTGCCGTaGTCATGCTCTTCGCCACCATTTACCCCACCTGACCCAGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSPLRSSGPSSSPLP*SCSSPPFTPPDPAV Trigger: CACGGCTGGGTCAGGTGGGGTAAATGGTGGCGAAGAGCATGACAACGGCAAGGGGGAGGAAGACGGGCCGGAGGAACGGAGCGGAGACGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CAA 90 bp | GGAGTCTCGTCTCCGCTCCGTTCCTCCGGCCCGTCTTCCTCCCCCTaGCCGTTGTCATGCTCTTCGCCACCATTTACCCCACCTGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVSSPLRSSGPSSSP*PLSCSSPPFTPPDP Trigger: TGGGTCAGGTGGGGTAAATGGTGGCGAAGAGCATGACAACGGCAAGGGGGAGGAAGACGGGCCGGAGGAACGGAGCGGAGACGAGACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS GCA 72 bp | GTCATCTCCTTGTTCCTCTACGGCCTTGTCACCCGGTaGCTCGGATCCCGGAGTCTCGTCTCCGCTCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VISLFLYGLVTR*LGSRSLVSAPF Trigger: GAACGGAGCGGAGACGAGACTCCGGGATCCGAGGCACCGGGTGACAAGGCCGTAGAGGAACAAGGAGATGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CAA 72 bp | CTCCGTTCCTCCGGCCCGTCTTCCTCCCCCTTGCCGTaGTCATGCTCTTCGCCACCATTTACCCCACCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRSSGPSSSPLP*SCSSPPFTPPD Trigger: GTCAGGTGGGGTAAATGGTGGCGAAGAGCATGACAACGGCAAGGGGGAGGAAGACGGGCCGGAGGAACGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS GCA 72 bp | CTTGGCCTCGGCTTCGGTTCTGCCGGTTTCTCTTGTTaGGGTTGTTCCGGCGGTTTGTACGCTTCTCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLGFGSAGFSC*GCSGGLYASQR Trigger: CCTCTGAGAAGCGTACAAACCGCCGGAACAACCGCAACAAGAGAAACCGGCAGAACCGAAGCCGAGGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
||
| CDS CAA 72 bp | CCTTGGCCTCGGCTTCGGTTCTGCCGGTTTCTCTTGTaGCGGTTGTTCCGGCGGTTTGTACGCTTCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PWPRLRFCRFLL*RLFRRFVRFSE Trigger: CTCTGAGAAGCGTACAAACCGCCGGAACAACCGCAACAAGAGAAACCGGCAGAACCGAAGCCGAGGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 72 bp | TCACTATCTTGGTCATCTCCTTGTTCCTCTACGGCCTaGTCACCCGGTGCCTCGGATCCCGGAGTCTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLSWSSPCSSTA*SPGASDPGVSS Trigger: AGACGAGACTCCGGGATCCGAGGCACCGGGTGACAAGGCCGTAGAGGAACAAGGAGATGACCAAGATAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS GCA 72 bp | AATCACCTCACACTCCTCTATGGTCTTGGGAGGGACTaGAGTCCGCACACGTTCCTCAACAGGCACAGCATG | + |
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Preference number: 6 (lower is better) Translates to: NHLTLLYGLGRD*SPHTFLNRHSM Trigger: CATGCTGTGCCTGTTGAGGAACGTGTGCGGACTGCAGTCCCTCCCAAGACCATAGAGGAGTGTGAGGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CCA 72 bp | GAAGTCCCACCATCAGAATCACCTCACACTCCTCTATaGTCTTGGGAGGGACTGCAGTCCGCACACGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EVPPSESPHTPL*SWEGLQSAHVP Trigger: AGGAACGTGTGCGGACTGCAGTCCCTCCCAAGACCATAGAGGAGTGTGAGGTGATTCTGATGGTGGGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 72 bp | ACTTCTTGCCCCAGACCAAAGGGTAGGGAACTTTTCTaGGAAGAGCGGCTGGCCTCCATATCGGTCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TSCPRPKGRELF*EERLASISVFA Trigger: AGCAAAGACCGATATGGAGGCCAGCCGCTCTTCTCAGAAAAGTTCCCTACCCTTTGGTCTGGGGCAAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 72 bp | ATCTGGACCAGCTTACTAAGGCACTGGGAGGCTTGCTaGACTAAGAGGTCTCGGCTTTTGGGGTCCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: IWTSLLRHWEAC*TKRSRLLGSIS Trigger: AGAGATGGACCCCAAAAGCCGAGACCTCTTAGTTCAGCAAGCCTCCCAGTGCCTTAGTAAGCTGGTCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 72 bp | ACATGGGGTAGAAGGGCTCGATCTGCCAGAGACTCCTaGCTAATTCGGAATGCCACACCCAAGTCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TWGRRARSARDS*LIRNATPKSSP Trigger: TGGAGAAGACTTGGGTGTGGCATTCCGAATTAGCAAGGAGTCTCTGGCAGATCGAGCCCTTCTACCCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 90 bp | TATACGTGTCCAGGTTCACAAGCGTCTGGTCCTCCTCTTCATCTTTaGCTTCTTCTTCTGGAGGTGGTGGGGACTTTGAGCGGCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: YTCPGSQASGPPLHL*LLLLEVVGTLSGCG Trigger: ACCACAGCCGCTCAAAGTCCCCACCACCTCCAGAAGAAGAAGCAAAAGATGAAGAGGAGGACCAGACGCTTGTGAACCTGGACACGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 90 bp | TTGCAAAGGACATGGGGTAGAAGGGCTCGATCTGCCAGAGACTCCTaGCTAATTCGGAATGCCACACCCAAGTCTTCTCCATTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LQRTWGRRARSARDS*LIRNATPKSSPFLE Trigger: CTCCAAGAATGGAGAAGACTTGGGTGTGGCATTCCGAATTAGCAAGGAGTCTCTGGCAGATCGAGCCCTTCTACCCCATGTCCTTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS GCA 72 bp | GGCTCGATCTGCCAGAGACTCCTTGCTAATTCGGAATaGCACACCCAAGTCTTCTCCATTCTTGGAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSICQRLLANSE*HTQVFSILGEG Trigger: TCCTTCTCCAAGAATGGAGAAGACTTGGGTGTGGCATTCCGAATTAGCAAGGAGTCTCTGGCAGATCGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CCA 72 bp | CTCTCAGGGTTGTCTTTTGCGTATTTCAGTGCCCACTaGGTCTTTCCAGATCCAGGAAGTCCCACCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: LSGLSFAYFSAH*VFPDPGSPTIR Trigger: TCTGATGGTGGGACTTCCTGGATCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAAGACAACCCTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 72 bp | TCTGGCCAAATTCCTCAAACTGCCCGTTTTCTGCCTTaGGTCCTCTTCCGTCAAAACCGTAGGAGAACTCGT | + |
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Preference number: 6 (lower is better) Translates to: SGQIPQTARFLP*VLFRQNRRRTR Trigger: ACGAGTTCTCCTACGGTTTTGACGGAAGAGGACTCAAGGCAGAAAACGGGCAGTTTGAGGAATTTGGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 90 bp | CAGTCTCAGCTCCCAGAACATTGTATCTTCTCTCAGGGTTGTCTTTaGCGTATTTCAGTGCCCACTGGGTCTTTCCAGATCCAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QSQLPEHCIFSQGCL*RISVPTGSFQIQEV Trigger: GACTTCCTGGATCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAATGTTCTGGGAGCTGAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 72 bp | GAAGAGCGGCTGGCCTCCATATCGGTCTTTGCTTATTaGAAAATGGAGATCCGAGGTATACGTGTCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: EERLASISVFAY*KMEIRGIRVQV Trigger: AACCTGGACACGTATACCTCGGATCTCCATTTTCAAATAAGCAAAGACCGATATGGAGGCCAGCCGCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 90 bp | CCCTTCATCCTCATTTGCGTGAGAACAGTCTCAGCTCCCAGAACATaGTATCTTCTCTCAGGGTTGTCTTTTGCGTATTTCAGTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PFILICVRTVSAPRT*YLLSGLSFAYFSAH Trigger: GTGGGCACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAATGTTCTGGGAGCTGAGACTGTTCTCACGCAAATGAGGATGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 90 bp | CCCTTGGTAACCGTAGTAATTCCTGTAGTATCGGTCTCTGTCCTGTaGGTGGTGGTAGTAGTAATTCTGCCAATCCCGGTTGTATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PLVTVVIPVVSVSVL*VVVVVILPIPVVLS Trigger: AGACAATACAACCGGGATTGGCAGAATTACTACTACCACCACCAACAGGACAGAGACCGATACTACAGGAATTACTACGGTTACCAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS GCA 72 bp | TCCCAGAACATTGTATCTTCTCTCAGGGTTGTCTTTTaGGTATTTCAGTGCCCACTGGGTCTTTCCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SQNIVSSLRVVF*VFQCPLGLSRS Trigger: GGATCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAATGTTCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 72 bp | CTCCCAGAACATTGTATCTTCTCTCAGGGTTGTCTTTaGCGTATTTCAGTGCCCACTGGGTCTTTCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: LPEHCIFSQGCL*RISVPTGSFQI Trigger: GATCTGGAAAGACCCAGTGGGCACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAATGTTCTGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 72 bp | TTAGGAACAACTACCACCACCTTCCTGGAGAATGTCTaGAACAGCAGTAACTTCCTTCGTTGGCCAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGTTTTTFLENV*NSSNFLRWPEL Trigger: CAACTCTGGCCAACGAAGGAAGTTACTGCTGTTCAAGACATTCTCCAGGAAGGTGGTGGTAGTTGTTCCTAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 72 bp | ACCGTAGTAATTCCTGTAGTATCGGTCTCTGTCCTGTaGGTGGTGGTAGTAGTAATTCTGCCAATCCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: TVVIPVVSVSVL*VVVVVILPIPV Trigger: AACCGGGATTGGCAGAATTACTACTACCACCACCAACAGGACAGAGACCGATACTACAGGAATTACTACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CCA 72 bp | AAGTTTAATTCTACGACACAATTCTTGCAAAGGACATaGGGTAGAAGGGCTCGATCTGCCAGAGACTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KFNSTTQFLQRT*GRRARSARDSL Trigger: CAAGGAGTCTCTGGCAGATCGAGCCCTTCTACCCCATGTCCTTTGCAAGAATTGTGTCGTAGAATTAAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 90 bp | TCTTCCTCATTAGGAACAACTACCACCACCTTCCTGGAGAATGTCTaGAACAGCAGTAACTTCCTTCGTTGGCCAGAGTTGTACACATTA | + |
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Preference number: 6 (lower is better) Translates to: SSSLGTTTTTFLENV*NSSNFLRWPELYTL Trigger: TAATGTGTACAACTCTGGCCAACGAAGGAAGTTACTGCTGTTCAAGACATTCTCCAGGAAGGTGGTGGTAGTTGTTCCTAATGAGGAAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 72 bp | TTCCTTGCTTCCTCCTTGTATTTAGTAACAATGGGTTaGGCTTCCTCTTTTTCCAGCTCCCCATATGTCACC | + |
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Preference number: 6 (lower is better) Translates to: FLASSLYLVTMG*ASSFSSSPYVT Trigger: GGTGACATATGGGGAGCTGGAAAAAGAGGAAGCTCAACCCATTGTTACTAAATACAAGGAGGAAGCAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CCA 72 bp | TCTAAGGAGAGAGACTTCTGTGCAGCCTTCTTTCATTaGGAGATTCTGAGTTACCTTGGCTTCAAAGCATAC | + |
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Preference number: 6 (lower is better) Translates to: SKERDFCAAFFH*EILSYLGFKAY Trigger: GTATGCTTTGAAGCCAAGGTAACTCAGAATCTCCCAATGAAAGAAGGCTGCACAGAAGTCTCTCTCCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS TCA 72 bp | AACTCTTCTGGTGGTGGGAAAAAGGGCTCCTCCTTCTaGCCAAAGTTTAATTCTACGACACAATTCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: NSSGGGKKGSSF*PKFNSTTQFLQ Trigger: TTGCAAGAATTGTGTCGTAGAATTAAACTTTGGTCAGAAGGAGGAGCCCTTTTTCCCACCACCAGAAGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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| CDS CAA 72 bp | GTGGTGGTAGTAGTAATTCTGCCAATCCCGGTTGTATaGTCTGTAATAGTCTCTGTATCTGTTGTACTCATA | + |
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Preference number: 6 (lower is better) Translates to: VVVVVILPIPVV*SVIVSVSVVLI Trigger: TATGAGTACAACAGATACAGAGACTATTACAGACAATACAACCGGGATTGGCAGAATTACTACTACCACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096753.5 |
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