Pregenerated sensors for HNRNPUL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040725Ensembl transcript IDs: ENSMUST00000043765.14, ENSMUST00000108401.3, ENSMUST00000206832.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACATTGCAGGTCTGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTaGTGGAGGTGGAGGTGGTGGTGGTGGTGGTGGTGGAGGAACTTT | + |
Preference number: 1 (lower is better) Translates to: TLQVWHLEEQWRWRW*WRWRWWWWWWWRNF Trigger: AAAGTTCCTCCACCACCACCACCACCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCAGACCTGCAATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR CCA 90 bp | AAAACATTGCAGGTCTGGCACCTGGAAGAGCAATGGAGGTGGAGGTaGTGGTGGAGGTGGAGGTGGTGGTGGTGGTGGTGGTGGAGGAAC | + |
Preference number: 1 (lower is better) Translates to: KTLQVWHLEEQWRWR*WWRWRWWWWWWWRN Trigger: GTTCCTCCACCACCACCACCACCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCAGACCTGCAATGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR CCA 90 bp | AAGGACCACTGTAAAACATTGCAGGTCTGGCACCTGGAAGAGCAATaGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGTGGTGGTGG | + |
Preference number: 1 (lower is better) Translates to: KDHCKTLQVWHLEEQ*RWRWWWRWRWWWWW Trigger: CCACCACCACCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCAGACCTGCAATGTTTTACAGTGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR CCA 90 bp | AGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGCACCTaGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGT | + |
Preference number: 1 (lower is better) Translates to: RVIKRTTVKHCRSGT*KSNGGGGGGGGGGG Trigger: ACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR TCA 90 bp | AATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTaGACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCAT | + |
Preference number: 1 (lower is better) Translates to: NSHTLSKYKKQLQSN*TDACVQSYGELRHH Trigger: ATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGGGTCTAAAGGGAAGCTaGCCCCACCCCCACCTTCCC | + |
Preference number: 2 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWGLKGS*PHPHLP Trigger: GGGAAGGTGGGGGTGGGGCCAGCTTCCCTTTAGACC...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | CTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTGGAGTACCTCCCCAGTCACTGTaGCCTCACAAGGGAGGCTTC | + |
Preference number: 2 (lower is better) Translates to: LHPLTRLCPPETTTTPGVPPQSL*PHKGGF Trigger: GAAGCCTCCCTTGTGAGGCCACAGTGACTGGGGAGG...TACTCCAGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR TCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGCAGTTACAATCCAACTaGACAGACGCTTGTGTGCAA | + |
Preference number: 2 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWQLQSN*TDACVQ Trigger: TTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTG...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | CTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTGGAGTACTCCTCTGGAAAAAGTaGGCTAGAGAGAGGCAGCCC | + |
Preference number: 2 (lower is better) Translates to: LHPLTRLCPPETTTTPGVLLWKK*ARERQP Trigger: GGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAG...TACTCCAGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR TCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGAATGCCTGGCCTGTATaGAGAGAGAAGCTCCTCTGG | + |
Preference number: 2 (lower is better) Translates to: SHCGLTREASLAKKAGEENAWPV*REKLLW Trigger: CCAGAGGAGCTTCTCTCTTCATACAGGCCAGGCATT...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | CCTTCCCTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTAGAGAGAAGCTCCTCTaGAAAAAGTGGGCTAGAGAG | + |
Preference number: 2 (lower is better) Translates to: PSLHPLTRLCPPETTTTPREKLL*KKWARE Trigger: CTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCT...AGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAGGGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGAACTACCACGACTCCTaGAGTAAAAGGTTTCAAGTT | + |
Preference number: 2 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWNYHDS*SKRFQV Trigger: AACTTGAAACCTTTTACTCCAGGAGTCGTGGTAGTT...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR GCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGATCCAGAGAGGAAAATaGCTGGCCTGTATGAAGAGA | + |
Preference number: 2 (lower is better) Translates to: SHCGLTREASLAKKAGEEIQRGK*LACMKR Trigger: TCTCTTCATACAGGCCAGGCATTTTCCTCTCTGGAT...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAACCTCCCCAGTCACTGTaGCCTCACAAGGGAGGCTTC | + |
Preference number: 2 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKPPQSL*PHKGGF Trigger: GAAGCCTCCCTTGTGAGGCCACAGTGACTGGGGAGG...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR TCA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTAATGCCTGGCCTGTATaGAGAGAGAAGCTCCTCTGG | + |
Preference number: 2 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCNAWPV*REKLLW Trigger: CCAGAGGAGCTTCTCTCTTCATACAGGCCAGGCATT...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACCTCACTGTTGCCTGTTaGAATCCAGAGAGGAAAATG | + |
Preference number: 2 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNLTVAC*NPERKM Trigger: CATTTTCCTCTCTGGATTCCAACAGGCAACAGTGAG...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACTCCTCTGGAAAAAGTaGGCTAGAGAGAGGCAGCCC | + |
Preference number: 2 (lower is better) Translates to: SSIVTLSPSTKSSYNPTELLWKK*ARERQP Trigger: GGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAG...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CCA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTACTCACTGTTGCCTGTTaGAATCCAGAGAGGAAAATG | + |
Preference number: 2 (lower is better) Translates to: NRRLCAKLRGTETSYKKLLTVAC*NPERKM Trigger: CATTTTCCTCTCTGGATTCCAACAGGCAACAGTGAG...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR CCA 72 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTaGAGGTGGAGGTGGTGGTGGTGGTGGTGGTGGAGG | + |
Preference number: 3 (lower is better) Translates to: WHLEEQWRWRWW*RWRWWWWWWWR Trigger: CCTCCACCACCACCACCACCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR CCA 72 bp | GTCTGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTaGTGGAGGTGGAGGTGGTGGTGGTGGTGGTGGTGG | + |
Preference number: 3 (lower is better) Translates to: VWHLEEQWRWRW*WRWRWWWWWWW Trigger: CCACCACCACCACCACCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCAGAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR GCA 72 bp | CCACCCCCACCTTCCCTTCACCCTCTCACCCGCTTATaGCCACCAGAAACTACCACGACTCCTGGAGTAAAA | + |
Preference number: 3 (lower is better) Translates to: PPPPSLHPLTRL*PPETTTTPGVK Trigger: TTTTACTCCAGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAGGGAAGGTGGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR CAA 90 bp | CCTTCCCTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTCAACTGAACAGACGCTaGTGTGCAAAGTTACGGGGA | + |
Preference number: 3 (lower is better) Translates to: PSLHPLTRLCPPETTTTPQLNRR*CAKLRG Trigger: TCCCCGTAACTTTGCACACAAGCGTCTGTTCAGTTG...AGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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3UTR-3UTR CAA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGGCTCACTGTTGCCTGTaGGAATCCAGAGAGGAAAAT | + |
Preference number: 3 (lower is better) Translates to: SHCGLTREASLAKKAGEEAHCCL*ESREEN Trigger: ATTTTCCTCTCTGGATTCCAACAGGCAACAGTGAGC...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR TCA 72 bp | ACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTaGACAGACGCTTGTGTGCAAAGTTACGGGGAACTG | + |
Preference number: 3 (lower is better) Translates to: TLSKYKKQLQSN*TDACVQSYGEL Trigger: CAGTTCCCCGTAACTTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CAA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTAAGAAAAGCTCACTGTaGCCTGTTGGAATCCAGAGA | + |
Preference number: 3 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCKKSSL*PVGIQR Trigger: TCTCTGGATTCCAACAGGCAACAGTGAGCTTTTCTT...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CAA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAGGTTAAAGGTGATTTaGTTGTTTCGAGGGTGTGGC | + |
Preference number: 3 (lower is better) Translates to: SLQVQKAVTIQLNRRLCARLKVI*LFRGCG Trigger: GCCACACCCTCGAAACAACAAAATCACCTTTAACCT...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CAA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTAGGTTAAAGGTGATTTaGTTGTTTCGAGGGTGTGGC | + |
Preference number: 3 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCRLKVI*LFRGCG Trigger: GCCACACCCTCGAAACAACAAAATCACCTTTAACCT...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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3UTR-3UTR CAA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAAAAGAAAAGCTCACTGTaGCCTGTTGGAATCCAGAGA | + |
Preference number: 3 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKKKSSL*PVGIQR Trigger: TCTCTGGATTCCAACAGGCAACAGTGAGCTTTTCTT...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGTCCAGGCCGCGGCGCTaGAGCTCCTCGCGAAGTTCG | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPSRPRR*SSSRSS Trigger: CGAACTTCGCGAGGAGCTGCAGCGCCGCGGCCTGGA...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGTGGCGGAGGTGGAGGTaGTGGGGCTGTGTAGCCCTG | + |
Preference number: 4 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWWRRWR*WGCVAL Trigger: CAGGGCTACACAGCCCCACCACCTCCACCTCCGCCA...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGACACACGCCCTCTTCTaGCCCCATAGCTGGCACGGG | + |
Preference number: 4 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWTHALF*PHSWHG Trigger: CCCGTGCCAGCTATGGGGTCAGAAGAGGGCGTGTGT...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGGGAAGCCTCCTCGGTTaGCTCCAGGAGGGCCTCGGT | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPGSLLG*LQEGLG Trigger: ACCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCC...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGCCTCACCAGCTTGTCTaGCTCCTCCCGCTGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPPHQLV*LLPLEL Trigger: GAGCTCCAGCGGGAGGAGGCAGACAAGCTGGTGAGG...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | CCTTCCCTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTGGAAGCCTCCTCGGTTaGCTCCAGGAGGGCCTCGGT | + |
Preference number: 4 (lower is better) Translates to: PSLHPLTRLCPPETTTTPGSLLG*LQEGLG Trigger: ACCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCC...AGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAGGGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGAACCTCCTCGGTAGTTaGCTCCTCCACCACCGCTGC | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPNLLGS*LLHHRC Trigger: GCAGCGGTGGTGGAGGAGGCAACTACCGAGGAGGTT...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGCGGAGGTGGAGGTGGTaGGGCTGTGTAGCCCTGGGT | + |
Preference number: 4 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKRRWRW*GCVALG Trigger: ACCCAGGGCTACACAGCCCCACCACCTCCACCTCCG...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGCCACCTCCCCGGTTCTaGAAGCCTCCTCGGTTGCCT | + |
Preference number: 4 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKPPPRF*KPPRLP Trigger: AGGCAACCGAGGAGGCTTCCAGAACCGGGGAGGTGG...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGTCTGCCTCCTCCCGCTaGAGCTCAATGAACAGAACC | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPSASSR*SSMNRT Trigger: GGTTCTGTTCATTGAGCTCCAGCGGGAGGAGGCAGA...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGGATACTGGTTATAGCTaGGCTGAGGGTAGGTCTGGG | + |
Preference number: 4 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWDTGYS*AEGRSG Trigger: CCCAGACCTACCCTCAGCCCAGCTATAACCAGTATC...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGAGACGGTTGAGGCACTaGGTGGCCTGCTGGATCAGG | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEERRLRH*VACWIR Trigger: CCTGATCCAGCAGGCCACTCAGTGCCTCAACCGTCT...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGTTTCCGTCTCTGGGCTaGCCCATAAACATTGGTCTG | + |
Preference number: 4 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWFPSLG*PINIGL Trigger: CAGACCAATGTTTATGGGTCAGCCCAGAGACGGAAA...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGTGGCTGTTGTGGTGGTaGCTGTTGCTGAGGAGCCCG | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEEWLLWW*LLLRSP Trigger: CGGGCTCCTCAGCAACAGCCACCACCACAACAGCCA...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGGATACTGGTTATAGCTaGGCTGAGGGTAGGTCTGGG | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPDTGYS*AEGRSG Trigger: CCCAGACCTACCCTCAGCCCAGCTATAACCAGTATC...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGGTCGGGCTCTGTAGATaGAAGATGCTTCACGGAGAT | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPVGLCR*KMLHGD Trigger: ATCTCCGTGAAGCATCTTCCATCTACAGAGCCCGAC...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGCGGGCCACTTTGAAGTaGAGGTCACAGTTATATGTG | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPRATLK*RSQLYV Trigger: CACATATAACTGTGACCTGCACTTCAAAGTGGCCCG...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | CCTTCCCTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTCCTTCCTCGTTGTATTaGCTCACCAGCTTGTCTGCC | + |
Preference number: 4 (lower is better) Translates to: PSLHPLTRLCPPETTTTPPSSLY*LTSLSA Trigger: GGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGG...AGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGGGCCTCTTTCGATTCTaGAATTGTGGTCTGTCTGTC | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPGLFRF*NCGLSV Trigger: GACAGACAGACCACAATTCCAGAATCGAAAGAGGCC...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCCCTCAATCGTCAATaGATAGCCACTACTCCGGTC | + |
Preference number: 4 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKALNRQ*IATTPV Trigger: GACCGGAGTAGTGGCTATCCATTGACGATTGAGGGC...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGGGTCTCGGGCCACTTTaGAGTGCAGGTCACAGTTAT | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEEGLGPL*SAGHSY Trigger: ATAACTGTGACCTGCACTTCAAAGTGGCCCGAGACC...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGTTTCGGGCAGCGATCTaGATAAGACGGTTGAGGCAC | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEEFRAAI*IRRLRH Trigger: GTGCCTCAACCGTCTTATTCAGATCGCTGCCCGAAA...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGCTTGACTCATTTTCTTaGTTGATGACTGGTGTCTCG | + |
Preference number: 4 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWLDSFS*LMTGVS Trigger: CGAGACACCAGTCATCAAGCAAGAAAATGAGTCAAG...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTCTGAGGGGGAGGTGCTaGATGAATGTGAACCCTGGG | + |
Preference number: 4 (lower is better) Translates to: LYEERSSSGKSGLERGSPLRGRC*MNVNPG Trigger: CCCAGGGTTCACATTCATCCAGCACCTCCCCCTCAG...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGAGGGCTATAGCTAGGTaGTGGTGGTGGTTGTTGTGG | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEERAIAR*WWWLLW Trigger: CCACAACAACCACCACCACCACCTAGCTATAGCCCT...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACGCTGGCACGGGCTCCTaGCCACAGGTATGCAAAGCC | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNAGTGS*PQVCKA Trigger: GGCTTTGCATACCTGTGGTCAGGAGCCCGTGCCAGC...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGCCCGCATCTTATCCATaGTGGCATTGGTACCCAGAA | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEEPASYP*WHWYPE Trigger: TTCTGGGTACCAATGCCATCATGGATAAGATGCGGG...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGCTTGACTCATTTTCTTaGTTGATGACTGGTGTCTCG | + |
Preference number: 4 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPLDSFS*LMTGVS Trigger: CGAGACACCAGTCATCAAGCAAGAAAATGAGTCAAG...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGTCTCACACTCTGCTTTaGTCTTTGGCCCAATGGTGC | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEESHTLL*SLAQWC Trigger: GCACCATTGGGCCAAAGAGCAAAGCAGAGTGTGAGA...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACCCACCTCCCCGGTTCTaGAAGCCTCCTCGGTTGCCT | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNPPPRF*KPPRLP Trigger: AGGCAACCGAGGAGGCTTCCAGAACCGGGGAGGTGG...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGTCTTCAGCAGGAGGCTaGGGAGAGCGGCCCCTTCGA | + |
Preference number: 4 (lower is better) Translates to: HSGSESNQKDHCKTLQVWSSAGG*GERPLR Trigger: TCGAAGGGGCCGCTCTCCTCAGCCTCCTGCTGAAGA...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTTTTCGGGCAGCGATCTaGATAAGACGGTTGAGGCAC | + |
Preference number: 4 (lower is better) Translates to: LYEERSSSGKSGLERGSPFRAAI*IRRLRH Trigger: GTGCCTCAACCGTCTTATTCAGATCGCTGCCCGAAA...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGGAATGTTGTACTTCTTaGAAGGGTTGGAGGCAGCGT | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEEECCTS*KGWRQR Trigger: ACGCTGCCTCCAACCCTTCCAAGAAGTACAACATTC...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | CTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTGGAGTAGAATGTTGTACTTCTTaGAAGGGTTGGAGGCAGCGT | + |
Preference number: 4 (lower is better) Translates to: LHPLTRLCPPETTTTPGVECCTS*KGWRQR Trigger: ACGCTGCCTCCAACCCTTCCAAGAAGTACAACATTC...TACTCCAGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGACAATAGCTTTCCGCTaGAAGCCTTCAAACGGTCTC | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEETIAFR*KPSNGL Trigger: GAGACCGTTTGAAGGCTTCCAGCGGAAAGCTATTGT...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | CATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTGGTAGCTGGCACGGGCTCCTaGCCACAGGTATGCAAAGCC | + |
Preference number: 4 (lower is better) Translates to: HVHSHECVNFSRESSLLVAGTGS*PQVCKA Trigger: GGCTTTGCATACCTGTGGTCAGGAGCCCGTGCCAGC...TACCAGCAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR GCA 90 bp | CTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTGGAGTACAGAATCTCACACTCTaGTTTGCTCTTTGGCCCAAT | + |
Preference number: 4 (lower is better) Translates to: LHPLTRLCPPETTTTPGVQNLTL*FALWPN Trigger: ATTGGGCCAAAGAGCAAAGCAGAGTGTGAGATTCTG...TACTCCAGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCATGGCCCACGTGGTCTTaGCAGCAGCAGGCAGGCCTA | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAWPTWS*QQQAGL Trigger: TAGGCCTGCCTGCTGCTGGCAAGACCACGTGGGCCA...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AAAAGACATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGTCCAGGCCGCGGCGCTaGAGCTCCTCGCGAAGTTCG | + |
Preference number: 4 (lower is better) Translates to: KRHVHSHECVNFSRESSLSRPRR*SSSRSS Trigger: CGAACTTCGCGAGGAGCTGCAGCGCCGCGGCCTGGA...CAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATGTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR TCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAAACACACGCCCTCTTCTaGCCCCATAGCTGGCACGGG | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKTHALF*PHSWHG Trigger: CCCGTGCCAGCTATGGGGTCAGAAGAGGGCGTGTGT...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | TTAAGGGAAAGAAAGATGCACAGGAAAAGACATGTTCATAGCCACGAGTGTGTAACACACGCCCTCTTCTaGCCCCATAGCTGGCACGGG | + |
Preference number: 4 (lower is better) Translates to: LRERKMHRKRHVHSHECVTHALF*PHSWHG Trigger: CCCGTGCCAGCTATGGGGTCAGAAGAGGGCGTGTGT...TACACACTCGTGGCTATGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR TCA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGCGACATCAGGCAAAGTaGAGTTGGCTTTCATTTCTA | + |
Preference number: 4 (lower is better) Translates to: SHCGLTREASLAKKAGEERHQAK*SWLSFL Trigger: TAGAAATGAAAGCCAACTTCACTTTGCCTGATGTCG...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACCCCGCTGGAGCTCAATaGACAGAACCTCATCCAGGA | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNPAGAQ*TEPHPG Trigger: TCCTGGATGAGGTTCTGTTCATTGAGCTCCAGCGGG...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAACCTCACCAGCTTGTCTaGCTCCTCCCGCTGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKPHQLV*LLPLEL Trigger: GAGCTCCAGCGGGAGGAGGCAGACAAGCTGGTGAGG...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGTTCTTGCTTGATGACTaGTGTCTCGTAGAATTGGTT | + |
Preference number: 4 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKFLLDD*CLVELV Trigger: AACCAATTCTACGAGACACCAGTCATCAAGCAAGAA...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGCTGAGGGGGAGGTGCTaGATGAATGTGAACCCTGGG | + |
Preference number: 4 (lower is better) Translates to: HSGSESNQKDHCKTLQVWLRGRC*MNVNPG Trigger: CCCAGGGTTCACATTCATCCAGCACCTCCCCCTCAG...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACTCCTTGGTTGTAGGGTaGCTGGCTGTAACTCGGCTG | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNSLVVG*LAVTRL Trigger: CAGCCGAGTTACAGCCAGCCACCCTACAACCAAGGA...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGCCCGCTGGAGCTCAATaGACAGAACCTCATCCAGGA | + |
Preference number: 4 (lower is better) Translates to: HSGSESNQKDHCKTLQVWPAGAQ*TEPHPG Trigger: TCCTGGATGAGGTTCTGTTCATTGAGCTCCAGCGGG...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGCCAATACGGACAACGTaGGGGTCGGGCTCTGTAGAT | + |
Preference number: 4 (lower is better) Translates to: HSGSESNQKDHCKTLQVWPIRTT*GSGSVD Trigger: ATCTACAGAGCCCGACCCCCACGTTGTCCGTATTGG...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACGCTATAGCTAGGTGGTaGTGGTGGTTGTTGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNAIARW*WWLLWW Trigger: CCACCACAACAACCACCACCACCACCTAGCTATAGC...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACAGGGCTATAGCTAGGTaGTGGTGGTGGTTGTTGTGG | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNRAIAR*WWWLLW Trigger: CCACAACAACCACCACCACCACCTAGCTATAGCCCT...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGTCCTTGGTTGTAGGGTaGCTGGCTGTAACTCGGCTG | + |
Preference number: 4 (lower is better) Translates to: HSGSESNQKDHCKTLQVWSLVVG*LAVTRL Trigger: CAGCCGAGTTACAGCCAGCCACCCTACAACCAAGGA...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACGGAGGTGGAGGTGGTaGGGCTGTGTAGCCCTGGGT | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTERRWRW*GCVALG Trigger: ACCCAGGGCTACACAGCCCCACCACCTCCACCTCCG...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAATGGCGGAGGTGGAGGTaGTGGGGCTGTGTAGCCCTG | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTEWRRWR*WGCVAL Trigger: CAGGGCTACACAGCCCCACCACCTCCACCTCCGCCA...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAATCTTCAGCAGGAGGCTaGGGAGAGCGGCCCCTTCGA | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTESSAGG*GERPLR Trigger: TCGAAGGGGCCGCTCTCCTCAGCCTCCTGCTGAAGA...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAAGCTGGCACGGGCTCCTaGCCACAGGTATGCAAAGCC | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTEAGTGS*PQVCKA Trigger: GGCTTTGCATACCTGTGGTCAGGAGCCCGTGCCAGC...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACTTACTGTGCGGTCTTTaGGGTCCTCATCAGTTGGAC | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNLLCGL*GPHQLD Trigger: GTCCAACTGATGAGGACCTCAAAGACCGCACAGTAA...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAATGGCCCACGTGGTCTTaGCAGCAGCAGGCAGGCCTA | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTEWPTWS*QQQAGL Trigger: TAGGCCTGCCTGCTGCTGGCAAGACCACGTGGGCCA...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTAAACCTCCTCGGTAGTTaGCTCCTCCACCACCGCTGC | + |
Preference number: 4 (lower is better) Translates to: NRRLCAKLRGTETSYKKLNLLGS*LLHHRC Trigger: GCAGCGGTGGTGGAGGAGGCAACTACCGAGGAGGTT...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCACCAATACGGACAACGTaGGGGTCGGGCTCTGTAGAT | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAPIRTT*GSGSVD Trigger: ATCTACAGAGCCCGACCCCCACGTTGTCCGTATTGG...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGGCTATAGCTAGGTGGTaGTGGTGGTTGTTGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: HSGSESNQKDHCKTLQVWAIARW*WWLLWW Trigger: CCACCACAACAACCACCACCACCACCTAGCTATAGC...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAGTAGTTCCCGTAGTATaGCGGCCACTGGCTCTGGTT | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAVVPVV*RPLALV Trigger: AACCAGAGCCAGTGGCCGCCATACTACGGGAACTAC...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | TTGACTACAAGTTTAAGTATGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGTCTTCAGCAGGAGGCTaGGGAGAGCGGCCCCTTCGA | + |
Preference number: 4 (lower is better) Translates to: LTTSLSMDVKGKKDAQEKSSAGG*GERPLR Trigger: TCGAAGGGGCCGCTCTCCTCAGCCTCCTGCTGAAGA...CTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCATACTTAAACTTGTAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
||
CDS-3UTR TCA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGGTCTCGGGCCACTTTaGAGTGCAGGTCACAGTTAT | + |
Preference number: 4 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCGLGPL*SAGHSY Trigger: ATAACTGTGACCTGCACTTCAAAGTGGCCCGAGACC...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR TCA 90 bp | CATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTGGTAGGTCTCGGGCCACTTTaGAGTGCAGGTCACAGTTAT | + |
Preference number: 4 (lower is better) Translates to: HVHSHECVNFSRESSLLVGLGPL*SAGHSY Trigger: ATAACTGTGACCTGCACTTCAAAGTGGCCCGAGACC...TACCAGCAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
||
CDS-3UTR TCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAAAGACGGTTGAGGCACTaGGTGGCCTGCTGGATCAGG | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTERRLRH*VACWIR Trigger: CCTGATCCAGCAGGCCACTCAGTGCCTCAACCGTCT...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCACCTTCCTCGTTGTATTaGCTCACCAGCTTGTCTGCC | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAPSSLY*LTSLSA Trigger: GGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGG...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR CCA 90 bp | CATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTGGTAGCCCTCAATCGTCAATaGATAGCCACTACTCCGGTC | + |
Preference number: 4 (lower is better) Translates to: HVHSHECVNFSRESSLLVALNRQ*IATTPV Trigger: GACCGGAGTAGTGGCTATCCATTGACGATTGAGGGC...TACCAGCAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
||
CDS-3UTR CCA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACACAATAGCTTTCCGCTaGAAGCCTTCAAACGGTCTC | + |
Preference number: 4 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNTIAFR*KPSNGL Trigger: GAGACCGTTTGAAGGCTTCCAGCGGAAAGCTATTGT...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR CCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAATCTGCCTCCTCCCGCTaGAGCTCAATGAACAGAACC | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKSASSR*SSMNRT Trigger: GGTTCTGTTCATTGAGCTCCAGCGGGAGGAGGCAGA...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAATGCTGGTATTGGCGCTaGAGCCAGGGATGTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKCWYWR*SQGCCC Trigger: ACAGCAACATCCCTGGCTCCAGCGCCAATACCAGCA...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR TCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCACCCGCATCTTATCCATaGTGGCATTGGTACCCAGAA | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAPASYP*WHWYPE Trigger: TTCTGGGTACCAATGCCATCATGGATAAGATGCGGG...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR TCA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTTTTCCGTCTCTGGGCTaGCCCATAAACATTGGTCTG | + |
Preference number: 4 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCFPSLG*PINIGL Trigger: CAGACCAATGTTTATGGGTCAGCCCAGAGACGGAAA...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR GCA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTTCTCACACTCTGCTTTaGTCTTTGGCCCAATGGTGC | + |
Preference number: 4 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCSHTLL*SLAQWC Trigger: GCACCATTGGGCCAAAGAGCAAAGCAGAGTGTGAGA...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR CCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAGTCGGGCTCTGTAGATaGAAGATGCTTCACGGAGAT | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAVGLCR*KMLHGD Trigger: ATCTCCGTGAAGCATCTTCCATCTACAGAGCCCGAC...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR CCA 90 bp | CATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTGGTAGTCGGGCTCTGTAGATaGAAGATGCTTCACGGAGAT | + |
Preference number: 4 (lower is better) Translates to: HVHSHECVNFSRESSLLVVGLCR*KMLHGD Trigger: ATCTCCGTGAAGCATCTTCCATCTACAGAGCCCGAC...TACCAGCAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CCA 90 bp | AAAAGACATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCCAATACGGACAACGTaGGGGTCGGGCTCTGTAGAT | + |
Preference number: 4 (lower is better) Translates to: KRHVHSHECVNFSRESSLPIRTT*GSGSVD Trigger: ATCTACAGAGCCCGACCCCCACGTTGTCCGTATTGG...CAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATGTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CCA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTATGCTGGTATTGGCGCTaGAGCCAGGGATGTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: NRRLCAKLRGTETSYKKLCWYWR*SQGCCC Trigger: ACAGCAACATCCCTGGCTCCAGCGCCAATACCAGCA...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS-3UTR GCA 90 bp | CATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTGGTACGGGCCACTTTGAAGTaGAGGTCACAGTTATATGTG | + |
Preference number: 4 (lower is better) Translates to: HVHSHECVNFSRESSLLVRATLK*RSQLYV Trigger: CACATATAACTGTGACCTGCACTTCAAAGTGGCCCG...TACCAGCAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAGGCCTCTTTCGATTCTaGAATTGTGGTCTGTCTGTC | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAGLFRF*NCGLSV Trigger: GACAGACAGACCACAATTCCAGAATCGAAAGAGGCC...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTAGCCCTCAATCGTCAATaGATAGCCACTACTCCGGTC | + |
Preference number: 4 (lower is better) Translates to: NRRLCAKLRGTETSYKKLALNRQ*IATTPV Trigger: GACCGGAGTAGTGGCTATCCATTGACGATTGAGGGC...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAAGTAGTTCCCGTAGTATaGCGGCCACTGGCTCTGGTT | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTEVVPVV*RPLALV Trigger: AACCAGAGCCAGTGGCCGCCATACTACGGGAACTAC...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | ATGTTAAGGGAAAGAAAGATGCACAGGAAAAGACATGTTCATAGCCACGAGTGTGTCTTCAATTCTGGGTaGTATACTTGCTGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: MLRERKMHRKRHVHSHECVFNSG*YTCCCG Trigger: GCCACAGCAGCAAGTATATCACCCAGAATTGAAGAC...ACACTCGTGGCTATGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCTTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CCA 90 bp | CATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTGGTATCGATTCTGGAATTGTaGTCTGTCTGTCTTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: HVHSHECVNFSRESSLLVSILEL*SVCLEL Trigger: CAGCTCAAGACAGACAGACCACAATTCCAGAATCGA...TACCAGCAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR TCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCACGACATCAGGCAAAGTaGAGTTGGCTTTCATTTCTA | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCARHQAK*SWLSFL Trigger: TAGAAATGAAAGCCAACTTCACTTTGCCTGATGTCG...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCATCTGTAGATGGAAGATaGTTCACGGAGATTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCASVDGR*FTEISS Trigger: TGAGGAAATCTCCGTGAAGCATCTTCCATCTACAGA...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAACAGAATCTCACACTCTaGTTTGCTCTTTGGCCCAAT | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKQNLTL*FALWPN Trigger: ATTGGGCCAAAGAGCAAAGCAGAGTGTGAGATTCTG...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AAAAGACATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGGGCCTCTTTCGATTCTaGAATTGTGGTCTGTCTGTC | + |
Preference number: 4 (lower is better) Translates to: KRHVHSHECVNFSRESSLGLFRF*NCGLSV Trigger: GACAGACAGACCACAATTCCAGAATCGAAAGAGGCC...CAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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3UTR CAA 72 bp | GTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTaGTGTGCAAAGTTACGGGGAACTGAGACATCATAT | + |
Preference number: 4 (lower is better) Translates to: VQKAVTIQLNRR*CAKLRGTETSY Trigger: ATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAAGTCTTCAATTCTGGGTaGTATACTTGCTGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTEVFNSG*YTCCCG Trigger: GCCACAGCAGCAAGTATATCACCCAGAATTGAAGAC...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR GCA 90 bp | TTAAGGGAAAGAAAGATGCACAGGAAAAGACATGTTCATAGCCACGAGTGTGTATCTGTAGATGGAAGATaGTTCACGGAGATTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: LRERKMHRKRHVHSHECVSVDGR*FTEISS Trigger: TGAGGAAATCTCCGTGAAGCATCTTCCATCTACAGA...TACACACTCGTGGCTATGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR GCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAATCTGTAGATGGAAGATaGTTCACGGAGATTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKSVDGR*FTEISS Trigger: TGAGGAAATCTCCGTGAAGCATCTTCCATCTACAGA...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTATCGATTCTGGAATTGTaGTCTGTCTGTCTTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: NRRLCAKLRGTETSYKKLSILEL*SVCLEL Trigger: CAGCTCAAGACAGACAGACCACAATTCCAGAATCGA...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCATCTCCTATCATAGCTTaGCTCATTTTCTTGCTTGAT | + |
Preference number: 4 (lower is better) Translates to: SLQVQKAVTIQLNRRLCASPIIA*LIFLLD Trigger: ATCAAGCAAGAAAATGAGTCAAGCTATGATAGGAGA...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAATTCTTGCTTGATGACTaGTGTCTCGTAGAATTGGTT | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKFLLDD*CLVELV Trigger: AACCAATTCTACGAGACACCAGTCATCAAGCAAGAA...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAAGAGGTCCTCATCAGTTaGACAGATTACAATAGCTTT | + |
Preference number: 4 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKEVLIS*TDYNSF Trigger: AAAGCTATTGTAATCTGTCCAACTGATGAGGACCTC...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | ATGTTAAGGGAAAGAAAGATGCACAGGAAAAGACATGTTCATAGCCACGAGTGTTCTCCTATCATAGCTTaGCTCATTTTCTTGCTTGAT | + |
Preference number: 4 (lower is better) Translates to: MLRERKMHRKRHVHSHECSPIIA*LIFLLD Trigger: ATCAAGCAAGAAAATGAGTCAAGCTATGATAGGAGA...ACACTCGTGGCTATGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCTTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CCA 90 bp | AGGGAAAGAAAGATGCACAGGAAAAGACATGTTCATAGCCACGAGTGTGTAAACAGTTATATGTGTCAATaGCCACAAGTGTATCATCAA | + |
Preference number: 4 (lower is better) Translates to: RERKMHRKRHVHSHECVNSYMCQ*PQVYHQ Trigger: TTGATGATACACTTGTGGCCATTGACACATATAACT...GTTTACACACTCGTGGCTATGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR GCA 90 bp | TTGACTACAAGTTTAAGTATGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGCTTGACTCATTTTCTTaGTTGATGACTGGTGTCTCG | + |
Preference number: 4 (lower is better) Translates to: LTTSLSMDVKGKKDAQEKLDSFS*LMTGVS Trigger: CGAGACACCAGTCATCAAGCAAGAAAATGAGTCAAG...CTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCATACTTAAACTTGTAGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAAGAGGTCCTCATCAGTTaGACAGATTACAATAGCTTT | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTEEVLIS*TDYNSF Trigger: AAAGCTATTGTAATCTGTCCAACTGATGAGGACCTC...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR TCA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAATCTCCTATCATAGCTTaGCTCATTTTCTTGCTTGAT | + |
Preference number: 4 (lower is better) Translates to: SSIVTLSPSTKSSYNPTESPIIA*LIFLLD Trigger: ATCAAGCAAGAAAATGAGTCAAGCTATGATAGGAGA...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CCA 90 bp | TTGACTACAAGTTTAAGTATGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGTTCTTGCTTGATGACTaGTGTCTCGTAGAATTGGTT | + |
Preference number: 4 (lower is better) Translates to: LTTSLSMDVKGKKDAQEKFLLDD*CLVELV Trigger: AACCAATTCTACGAGACACCAGTCATCAAGCAAGAA...CTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCATACTTAAACTTGTAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CCA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTAAGTTATATGTGTCAATaGCCACAAGTGTATCATCAA | + |
Preference number: 4 (lower is better) Translates to: NRRLCAKLRGTETSYKKLSYMCQ*PQVYHQ Trigger: TTGATGATACACTTGTGGCCATTGACACATATAACT...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 90 bp | GCTGGAAACCGCCGCCGCCCCCACGGCCTCGGAAGCCTCCGCCTCTaGTGTCAAAGCGCTTCTCAGGGGGCGGGCCGGCCTTCCGGCCTT | + |
Preference number: 5 (lower is better) Translates to: AGNRRRPHGLGSLRL*CQSASQGAGRPSGL Trigger: AAGGCCGGAAGGCCGGCCCGCCCCCTGAGAAGCGCTTTGACAGCAGAGGCGGAGGCTTCCGAGGCCGTGGGGGCGGCGGCGGTTTCCAGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 90 bp | CACCGCTGCCACCACCACCTCCCCGGTTCTGGAAGCCTCCTCGGTTaGCTCCAGGAGGGCCTCGGTTGTCATACCGCTGGAAACCGCCGC | + |
Preference number: 5 (lower is better) Translates to: HRCHHHLPGSGSLLG*LQEGLGCHTAGNRR Trigger: GCGGCGGTTTCCAGCGGTATGACAACCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCCAGAACCGGGGAGGTGGTGGTGGCAGCGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
||
CDS GCA 90 bp | TCAGCAAGCTCGGCCTTCAGGCCGCGAGTGTCCAGGCCGCGGCGCTaGAGCTCCTCGCGAAGTTCGTTCACCTTCAGGCGACGCACATCC | + |
Preference number: 5 (lower is better) Translates to: SASSAFRPRVSRPRR*SSSRSSFTFRRRTS Trigger: GGATGTGCGTCGCCTGAAGGTGAACGAACTTCGCGAGGAGCTGCAGCGCCGCGGCCTGGACACTCGCGGCCTGAAGGCCGAGCTTGCTGA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108401.3 ENSMUST00000206832.2 |
||
CDS-3UTR CAA 90 bp | TGGCACCTGGAAGAGCAATGGAGGTGGAGGTGGTGGTGGAGGTGGAGGTGGTGGTGGAAGCCTCCTCGGTaGCCTCCAGGAGGGCCTCGG | + |
Preference number: 5 (lower is better) Translates to: WHLEEQWRWRWWWRWRWWWKPPR*PPGGPR Trigger: CCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCCA...CCACCACCTCCACCTCCACCACCACCTCCACCTCCATTGCTCTTCCAGGTGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGTGGAAGCCTCCTCGGTaGCCTCCAGGAGGGCCTCGG | + |
Preference number: 5 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPWKPPR*PPGGPR Trigger: CCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCCA...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 90 bp | GGCTCCCGGAGGGTTCCGAGCAGGGCTATAGCTAGGTGGTGGTGGTaGTTGTTGTGGTGGTGGTTGTGGTGGCGGTGGCTGTTGTGGTGG | + |
Preference number: 5 (lower is better) Translates to: GSRRVPSRAIARWWW*LLWWWLWWRWLLWW Trigger: CCACCACAACAGCCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCGGGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 90 bp | GCTGGCTCCCGGAGGGTTCCGAGCAGGGCTATAGCTAGGTGGTGGTaGTGGTTGTTGTGGTGGTGGTTGTGGTGGCGGTGGCTGTTGTGG | + |
Preference number: 5 (lower is better) Translates to: AGSRRVPSRAIARWW*WLLWWWLWWRWLLW Trigger: CCACAACAGCCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCGGGAGCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 90 bp | GCTGCTGGCTCCCGGAGGGTTCCGAGCAGGGCTATAGCTAGGTGGTaGTGGTGGTTGTTGTGGTGGTGGTTGTGGTGGCGGTGGCTGTTG | + |
Preference number: 5 (lower is better) Translates to: AAGSRRVPSRAIARW*WWLLWWWLWWRWLL Trigger: CAACAGCCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCGGGAGCCAGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 90 bp | GTAGCTGCTGGCTCCCGGAGGGTTCCGAGCAGGGCTATAGCTAGGTaGTGGTGGTGGTTGTTGTGGTGGTGGTTGTGGTGGCGGTGGCTG | + |
Preference number: 5 (lower is better) Translates to: VAAGSRRVPSRAIAR*WWWLLWWWLWWRWL Trigger: CAGCCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCGGGAGCCAGCAGCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 90 bp | TGGTGGGGCTGTGTAGCCCTGGGTGTAGCCTCCTTGGTTGTAGGGTaGCTGGCTGTAACTCGGCTGTGGAGGGGTGTAGCTGCTCACTGT | + |
Preference number: 5 (lower is better) Translates to: WWGCVALGVASLVVG*LAVTRLWRGVAAHC Trigger: ACAGTGAGCAGCTACACCCCTCCACAGCCGAGTTACAGCCAGCCACCCTACAACCAAGGAGGCTACACCCAGGGCTACACAGCCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGCTGGGTGTAGCCTCCTaGGTTGTAGGGTGGCTGGCT | + |
Preference number: 5 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPLGVAS*VVGWLA Trigger: AGCCAGCCACCCTACAACCAAGGAGGCTACACCCAG...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 90 bp | GCCGGCCTTCCGGCCTTCCTCGTTGTATTGCCTCACCAGCTTGTCTaGCTCCTCCCGCTGGAGCTCAATGAACAGAACCTCATCCAGGAA | + |
Preference number: 5 (lower is better) Translates to: AGLPAFLVVLPHQLV*LLPLELNEQNLIQE Trigger: TTCCTGGATGAGGTTCTGTTCATTGAGCTCCAGCGGGAGGAGGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGCCGGAAGGCCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 90 bp | AGGCAGGCCTACCATCATCAGAATCTCACACTCTGCTTTGCTCTTTaGCCCAATGGTGCCCCGTATCCGCTCACTGAGGGGGAGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: RQAYHHQNLTLCFAL*PNGAPYPLTEGEVL Trigger: CAGCACCTCCCCCTCAGTGAGCGGATACGGGGCACCATTGGGCCAAAGAGCAAAGCAGAGTGTGAGATTCTGATGATGGTAGGCCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGACTCTGCTTTGCTCTTaGGCCCAATGGTGCCCCGTA | + |
Preference number: 5 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKTLLCS*AQWCPV Trigger: TACGGGGCACCATTGGGCCAAAGAGCAAAGCAGAGT...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGTTCCGGCCTTCCTCGTaGTATTGCCTCACCAGCTTG | + |
Preference number: 5 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKFRPSS*YCLTSL Trigger: CAAGCTGGTGAGGCAATACAACGAGGAAGGCCGGAA...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTGTAGGGGTGCTGGTATaGGCGCTGGAGCCAGGGATG | + |
Preference number: 5 (lower is better) Translates to: LYEERSSSGKSGLERGSPVGVLV*ALEPGM Trigger: CATCCCTGGCTCCAGCGCCAATACCAGCACCCCTAC...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTGGAGTACGGTCTCGGGCCACTTaGAAGTGCAGGTCACAGTTA | + |
Preference number: 5 (lower is better) Translates to: LHPLTRLCPPETTTTPGVRSRAT*KCRSQL Trigger: TAACTGTGACCTGCACTTCAAAGTGGCCCGAGACCG...TACTCCAGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGATTACCCCAGCGGTTTaGGTTGTAGCCACCACCTCC | + |
Preference number: 5 (lower is better) Translates to: SHCGLTREASLAKKAGEEITPAV*VVATTS Trigger: GGAGGTGGTGGCTACAACCAAAACCGCTGGGGTAAT...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS TCA 90 bp | AAAACACACACGCCCTCTTCTGACCCCATAGCTGGCACGGGCTCCTaGCCACAGGTATGCAAAGCCCTCAATCGTCAATGGATAGCCACT | + |
Preference number: 5 (lower is better) Translates to: KTHTPSSDPIAGTGS*PQVCKALNRQWIAT Trigger: AGTGGCTATCCATTGACGATTGAGGGCTTTGCATACCTGTGGTCAGGAGCCCGTGCCAGCTATGGGGTCAGAAGAGGGCGTGTGTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTGGGTGGGGCTTCTaGCTTCATTTCTGTCTTCAA | + |
Preference number: 5 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKAGWGF*LHFCLQ Trigger: TTGAAGACAGAAATGAAGCAAGAAGCCCCACCCAGC...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGCTTTCGATTCTGGAATaGTGGTCTGTCTGTCTTGAG | + |
Preference number: 5 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPLSILE*WSVCLE Trigger: CTCAAGACAGACAGACCACAATTCCAGAATCGAAAG...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 90 bp | CTGTGCCTCCATAACCATAGGAAAAAGGCTCTTCACCTAGCTGAGTaGTGCAAGAGTCCAAGGACCAGCCAATACGGACAACGTGGGGGT | + |
Preference number: 5 (lower is better) Translates to: LCLHNHRKKALHLAE*CKSPRTSQYGQRGG Trigger: ACCCCCACGTTGTCCGTATTGGCTGGTCCTTGGACTCTTGCAGCACTCAGCTAGGTGAAGAGCCTTTTTCCTATGGTTATGGAGGCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTTGTGGTCTGTCTGTCTaGAGCTGTGAGGCTTCAGGG | + |
Preference number: 5 (lower is better) Translates to: LYEERSSSGKSGLERGSPCGLSV*SCEASG Trigger: CCCTGAAGCCTCACAGCTCAAGACAGACAGACCACA...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGATCCACTTGCCATTCTaGGTAAAAGAAAGCTCCACA | + |
Preference number: 5 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPIHLPF*VKESST Trigger: TGTGGAGCTTTCTTTTACCAAGAATGGCAAGTGGAT...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTTTGTGGTGGTGGCTGTaGCTGAGGAGCCCGGTTATA | + |
Preference number: 5 (lower is better) Translates to: LYEERSSSGKSGLERGSPLWWWL*LRSPVI Trigger: TATAACCGGGCTCCTCAGCAACAGCCACCACCACAA...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 90 bp | GTGGCTGTTGTGGTGGTGGCTGTTGCTGAGGAGCCCGGTTATAGTTaGCTCGGTTGTTGGAGTTGTTGTTATCCCTGTTGTTATTACCCC | + |
Preference number: 5 (lower is better) Translates to: VAVVVVAVAEEPGYS*LGCWSCCYPCCYYP Trigger: GGGGTAATAACAACAGGGATAACAACAACTCCAACAACCGAGGCAACTATAACCGGGCTCCTCAGCAACAGCCACCACCACAACAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGTGGTGTCTCGTAGAATaGGTTCTGTCTGGTAATATT | + |
Preference number: 5 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPWCLVE*VLSGNI Trigger: AATATTACCAGACAGAACCAATTCTACGAGACACCA...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CCTTCCCTTCACCCTCTCACCCGCTTATGCCCACCAGAAACTACCACGACTCCTTTGGTACCCAGAATGTaGTACTTCTTGGAAGGGTTG | + |
Preference number: 5 (lower is better) Translates to: PSLHPLTRLCPPETTTTPLVPRM*YFLEGL Trigger: CAACCCTTCCAAGAAGTACAACATTCTGGGTACCAA...AGGAGTCGTGGTAGTTTCTGGTGGGCATAAGCGGGTGAGAGGGTGAAGGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGGCTCCAGCACCGTCAGGCAAAGTGAAGTaGGCTTTCATTTCTAAGACT | + |
Preference number: 5 (lower is better) Translates to: KAGAIRSSRHEPLKAPAPSGKVK*AFISKT Trigger: AGTCTTAGAAATGAAAGCCAACTTCACTTTGCCTGA...CGGTGCTGGAGCCTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGGTAGGGGTGCTGGTATaGGCGCTGGAGCCAGGGATG | + |
Preference number: 5 (lower is better) Translates to: HSGSESNQKDHCKTLQVWVGVLV*ALEPGM Trigger: CATCCCTGGCTCCAGCGCCAATACCAGCACCCCTAC...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | GAAAAAGGGGCCAAGGCAGGTGCTATTAGAAGCAGCCGGCACGAGCCTCTGAAGATCCACTTGCCATTCTaGGTAAAAGAAAGCTCCACA | + |
Preference number: 5 (lower is better) Translates to: EKGAKAGAIRSSRHEPLKIHLPF*VKESST Trigger: TGTGGAGCTTTCTTTTACCAAGAATGGCAAGTGGAT...CTTCAGAGGCTCGTGCCGGCTGCTTCTAATAGCACCTGCCTTGGCCCCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTAGAATGTTGTACTTCTaGGAAGGGTTGGAGGCAGCG | + |
Preference number: 5 (lower is better) Translates to: LYEERSSSGKSGLERGSPRMLYF*EGLEAA Trigger: CGCTGCCTCCAACCCTTCCAAGAAGTACAACATTCT...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGGTCTCGACCTCCTCGTaGTTGTGCCCAGGTAACCCC | + |
Preference number: 5 (lower is better) Translates to: HSGSESNQKDHCKTLQVWVSTSS*LCPGNP Trigger: GGGGTTACCTGGGCACAACAACGAGGAGGTCGAGAC...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACATTACCCCAGCGGTTTaGGTTGTAGCCACCACCTCC | + |
Preference number: 5 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNITPAV*VVATTS Trigger: GGAGGTGGTGGCTACAACCAAAACCGCTGGGGTAAT...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGACATGTTCATAGCCACGAGTCGACCTCCTCGTTGTaGTGCCCAGGTAACCCCGGA | + |
Preference number: 5 (lower is better) Translates to: WMLRERKMHRKRHVHSHESTSSL*CPGNPG Trigger: TCCGGGGTTACCTGGGCACAACAACGAGGAGGTCGA...CTCGTGGCTATGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTTCGACCTCCTCGTTGTaGTGCCCAGGTAACCCCGGA | + |
Preference number: 5 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCSTSSL*CPGNPG Trigger: TCCGGGGTTACCTGGGCACAACAACGAGGAGGTCGA...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS TCA 90 bp | CCTCAATCGTCAATGGATAGCCACTACTCCGGTCTCGGGCCACTTTaGAGTGCAGGTCACAGTTATATGTGTCAATGGCCACAAGTGTAT | + |
Preference number: 5 (lower is better) Translates to: PQSSMDSHYSGLGPL*SAGHSYMCQWPQVY Trigger: ATACACTTGTGGCCATTGACACATATAACTGTGACCTGCACTTCAAAGTGGCCCGAGACCGGAGTAGTGGCTATCCATTGACGATTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTTTTTCAAAGCGGCTATaGGTAGACTTCTTCCCTGTG | + |
Preference number: 5 (lower is better) Translates to: LYEERSSSGKSGLERGSPFSKRL*VDFFPV Trigger: CACAGGGAAGAAGTCTACCAATAGCCGCTTTGAAAA...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGCGGTTGTTGGAGTTGTaGTTATCCCTGTTGTTATTA | + |
Preference number: 5 (lower is better) Translates to: SHCGLTREASLAKKAGEERLLEL*LSLLLL Trigger: TAATAACAACAGGGATAACAACAACTCCAACAACCG...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAACTGGGTGTAGCCTCCTaGGTTGTAGGGTGGCTGGCT | + |
Preference number: 5 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKLGVAS*VVGWLA Trigger: AGCCAGCCACCCTACAACCAAGGAGGCTACACCCAG...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | ATGTTAAGGGAAAGAAAGATGCACAGGAAAAGACATGTTCATAGCCACGAGTGTGTCTCGACCTCCTCGTaGTTGTGCCCAGGTAACCCC | + |
Preference number: 5 (lower is better) Translates to: MLRERKMHRKRHVHSHECVSTSS*LCPGNP Trigger: GGGGTTACCTGGGCACAACAACGAGGAGGTCGAGAC...ACACTCGTGGCTATGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCTTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | AGTCACTGTGGCCTCACAAGGGAGGCTTCTTTAGCTAAGAAGGCAGGGGAGGAGACGGAGATTTCCTCATaGATCTTCATTTCAAAACAC | + |
Preference number: 5 (lower is better) Translates to: SHCGLTREASLAKKAGEETEISS*IFISKH Trigger: GTGTTTTGAAATGAAGATCAATGAGGAAATCTCCGT...CTCCTCCCCTGCCTTCTTAGCTAAAGAAGCCTCCCTTGTGAGGCCACAGTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCCTTCCTCGTTGTATaGCCTCACCAGCTTGTCTGC | + |
Preference number: 5 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCAFLVV*PHQLVC Trigger: GCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGC...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCATTGTGGTGGTGGCTGTaGCTGAGGAGCCCGGTTATA | + |
Preference number: 5 (lower is better) Translates to: SLQVQKAVTIQLNRRLCALWWWL*LRSPVI Trigger: TATAACCGGGCTCCTCAGCAACAGCCACCACCACAA...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAATGTGGTCTGTCTGTCTaGAGCTGTGAGGCTTCAGGG | + |
Preference number: 5 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKCGLSV*SCEASG Trigger: CCCTGAAGCCTCACAGCTCAAGACAGACAGACCACA...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAAACTCTGCTTTGCTCTTaGGCCCAATGGTGCCCCGTA | + |
Preference number: 5 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKTLLCS*AQWCPV Trigger: TACGGGGCACCATTGGGCCAAAGAGCAAAGCAGAGT...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CATTCGGGAAGTGAGAGTAATCAAAAGGACCACTGTAAAACATTGCAGGTCTGGTACTTCTTGGAAGGGTaGGAGGCAGCGTGTTTGATG | + |
Preference number: 5 (lower is better) Translates to: HSGSESNQKDHCKTLQVWYFLEG*EAACLM Trigger: CATCAAACACGCTGCCTCCAACCCTTCCAAGAAGTA...CCAGACCTGCAATGTTTTACAGTGGTCCTTTTGATTACTCTCACTTCCCGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAAAGCCTTCCTCGTTGTATaGCCTCACCAGCTTGTCTGC | + |
Preference number: 5 (lower is better) Translates to: SPSTKSSYNPTEQTLVCKAFLVV*PHQLVC Trigger: GCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGC...TTTGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CTGTATGAAGAGAGAAGCTCCTCTGGAAAAAGTGGGCTAGAGAGAGGCAGCCCTCGGTTGTTGGAGTTGTaGTTATCCCTGTTGTTATTA | + |
Preference number: 5 (lower is better) Translates to: LYEERSSSGKSGLERGSPRLLEL*LSLLLL Trigger: TAATAACAACAGGGATAACAACAACTCCAACAACCG...AGGGCTGCCTCTCTCTAGCCCACTTTTTCCAGAGGAGCTTCTCTCTTCATACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAAAGACATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCGGTCTCGGGCCACTTaGAAGTGCAGGTCACAGTTA | + |
Preference number: 5 (lower is better) Translates to: KRHVHSHECVNFSRESSLRSRAT*KCRSQL Trigger: TAACTGTGACCTGCACTTCAAAGTGGCCCGAGACCG...CAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATGTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACGCAATGCCCATCCACTaGCCATTCTTGGTAAAAGAA | + |
Preference number: 5 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNAMPIH*PFLVKE Trigger: TTCTTTTACCAAGAATGGCAAGTGGATGGGCATTGC...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTTACTTCTTGGAAGGGTaGGAGGCAGCGTGTTTGATG | + |
Preference number: 5 (lower is better) Translates to: HSLQVQKAVTIQLNRRLCYFLEG*EAACLM Trigger: CATCAAACACGCTGCCTCCAACCCTTCCAAGAAGTA...ACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | GTTAAAGGTGATTTTGTTGTTTCGAGGGTGTGGCTCTTCCTCGGTTACCTGAACTTGGTACCCAGAATGTaGTACTTCTTGGAAGGGTTG | + |
Preference number: 5 (lower is better) Translates to: VKGDFVVSRVWLFLGYLNLVPRM*YFLEGL Trigger: CAACCCTTCCAAGAAGTACAACATTCTGGGTACCAA...GTTCAGGTAACCGAGGAAGAGCCACACCCTCGAAACAACAAAATCACCTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTATTCCGGCCTTCCTCGTaGTATTGCCTCACCAGCTTG | + |
Preference number: 5 (lower is better) Translates to: NRRLCAKLRGTETSYKKLFRPSS*YCLTSL Trigger: CAAGCTGGTGAGGCAATACAACGAGGAAGGCCGGAA...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AGTTCAATAGTCACACTCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACGGTCTCGGGCCACTTaGAAGTGCAGGTCACAGTTA | + |
Preference number: 5 (lower is better) Translates to: SSIVTLSPSTKSSYNPTERSRAT*KCRSQL Trigger: TAACTGTGACCTGCACTTCAAAGTGGCCCGAGACCG...TTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGAGTGTGACTATTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TTGACTACAAGTTTAAGTATGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGTGTGGTCTGTCTGTCTaGAGCTGTGAGGCTTCAGGG | + |
Preference number: 5 (lower is better) Translates to: LTTSLSMDVKGKKDAQEKCGLSV*SCEASG Trigger: CCCTGAAGCCTCACAGCTCAAGACAGACAGACCACA...CTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCATACTTAAACTTGTAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCAGCAATGCCCATCCACTaGCCATTCTTGGTAAAAGAA | + |
Preference number: 5 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAAMPIH*PFLVKE Trigger: TTCTTTTACCAAGAATGGCAAGTGGATGGGCATTGC...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTAAGAATGTTGTACTTCTaGGAAGGGTTGGAGGCAGCG | + |
Preference number: 5 (lower is better) Translates to: NRRLCAKLRGTETSYKKLRMLYF*EGLEAA Trigger: CGCTGCCTCCAACCCTTCCAAGAAGTACAACATTCT...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCATTATCCATGATGGCATaGGTACCCAGAATGTTGTAC | + |
Preference number: 5 (lower is better) Translates to: SLQVQKAVTIQLNRRLCALSMMA*VPRMLY Trigger: GTACAACATTCTGGGTACCAATGCCATCATGGATAA...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | CATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTGGTATGGTGTCTCGTAGAATaGGTTCTGTCTGGTAATATT | + |
Preference number: 5 (lower is better) Translates to: HVHSHECVNFSRESSLLVWCLVE*VLSGNI Trigger: AATATTACCAGACAGAACCAATTCTACGAGACACCA...TACCAGCAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | TCTCTCCAAGTACAAAAAGCAGTTACAATCCAACTGAACAGACGCTTGTGTGCATGGTGTCTCGTAGAATaGGTTCTGTCTGGTAATATT | + |
Preference number: 5 (lower is better) Translates to: SLQVQKAVTIQLNRRLCAWCLVE*VLSGNI Trigger: AATATTACCAGACAGAACCAATTCTACGAGACACCA...TGCACACAAGCGTCTGTTCAGTTGGATTGTAACTGCTTTTTGTACTTGGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AGTTTAAGTATGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGACATGTTCAGCTGGGTGGGGCTTCTaGCTTCATTTCTGTCTTCAA | + |
Preference number: 5 (lower is better) Translates to: SLSMDVKGKKDAQEKTCSAGWGF*LHFCLQ Trigger: TTGAAGACAGAAATGAAGCAAGAAGCCCCACCCAGC...TGAACATGTCTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCATACTTAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTACTTTCGATTCTGGAATaGTGGTCTGTCTGTCTTGAG | + |
Preference number: 5 (lower is better) Translates to: NRRLCAKLRGTETSYKKLLSILE*WSVCLE Trigger: CTCAAGACAGACAGACCACAATTCCAGAATCGAAAG...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AAAAGACATGTTCATAGCCACGAGTGTGTAAACTTTTCAAGAGAAAGCTCCTTGCTTTCGATTCTGGAATaGTGGTCTGTCTGTCTTGAG | + |
Preference number: 5 (lower is better) Translates to: KRHVHSHECVNFSRESSLLSILE*WSVCLE Trigger: CTCAAGACAGACAGACCACAATTCCAGAATCGAAAG...CAAGGAGCTTTCTCTTGAAAAGTTTACACACTCGTGGCTATGAACATGTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTATTTTCAAAGCGGCTATaGGTAGACTTCTTCCCTGTG | + |
Preference number: 5 (lower is better) Translates to: NRRLCAKLRGTETSYKKLFSKRL*VDFFPV Trigger: CACAGGGAAGAAGTCTACCAATAGCCGCTTTGAAAA...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | ACTACAAGTTTAAGTATGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGACATTTTCAAAGCGGCTATaGGTAGACTTCTTCCCTGTG | + |
Preference number: 5 (lower is better) Translates to: TTSLSMDVKGKKDAQEKTFSKRL*VDFFPV Trigger: CACAGGGAAGAAGTCTACCAATAGCCGCTTTGAAAA...TGTCTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCATACTTAAACTTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS-3UTR CAA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTATCAGGCAAAGTGAAGTaGGCTTTCATTTCTAAGACT | + |
Preference number: 5 (lower is better) Translates to: NRRLCAKLRGTETSYKKLSGKVK*AFISKT Trigger: AGTCTTAGAAATGAAAGCCAACTTCACTTTGCCTGA...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | AACAGACGCTTGTGTGCAAAGTTACGGGGAACTGAGACATCATATAAAAAGTTAACGGAGATTTCCTCATaGATCTTCATTTCAAAACAC | + |
Preference number: 5 (lower is better) Translates to: NRRLCAKLRGTETSYKKLTEISS*IFISKH Trigger: GTGTTTTGAAATGAAGATCAATGAGGAAATCTCCGT...TAACTTTTTATATGATGTCTCAGTTCCCCGTAACTTTGCACACAAGCGTCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS-3UTR CAA 90 bp | ACTACAAGTTTAAGTATGGATGTTAAGGGAAAGAAAGATGCACAGGAAAAGACAACGGAGATTTCCTCATaGATCTTCATTTCAAAACAC | + |
Preference number: 5 (lower is better) Translates to: TTSLSMDVKGKKDAQEKTTEISS*IFISKH Trigger: GTGTTTTGAAATGAAGATCAATGAGGAAATCTCCGT...TGTCTTTTCCTGTGCATCTTTCTTTCCCTTAACATCCATACTTAAACTTGTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108401.3 |
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CDS GCA 72 bp | CGCCGCCGCCCCCACGGCCTCGGAAGCCTCCGCCTCTaGTGTCAAAGCGCTTCTCAGGGGGCGGGCCGGCCT | + |
Preference number: 6 (lower is better) Translates to: RRRPHGLGSLRL*CQSASQGAGRP Trigger: AGGCCGGCCCGCCCCCTGAGAAGCGCTTTGACAGCAGAGGCGGAGGCTTCCGAGGCCGTGGGGGCGGCGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | CGGTTGCCTCCAGGAGGGCCTCGGTTGTCATACCGCTaGAAACCGCCGCCGCCCCCACGGCCTCGGAAGCCT | + |
Preference number: 6 (lower is better) Translates to: RLPPGGPRLSYR*KPPPPPRPRKP Trigger: AGGCTTCCGAGGCCGTGGGGGCGGCGGCGGTTTCCAGCGGTATGACAACCGAGGCCCTCCTGGAGGCAACCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | TGGAAGCCTCCTCGGTTGCCTCCAGGAGGGCCTCGGTaGTCATACCGCTGGAAACCGCCGCCGCCCCCACGG | + |
Preference number: 6 (lower is better) Translates to: WKPPRLPPGGPR*SYRWKPPPPPR Trigger: CCGTGGGGGCGGCGGCGGTTTCCAGCGGTATGACAACCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | CCACCGCTGCCACCACCACCTCCCCGGTTCTGGAAGCCTCCTCGGTaGCCTCCAGGAGGGCCTCGGTTGTCATACCGCTGGAAACCGCCG | + |
Preference number: 6 (lower is better) Translates to: PPLPPPPPRFWKPPR*PPGGPRLSYRWKPP Trigger: CGGCGGTTTCCAGCGGTATGACAACCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCCAGAACCGGGGAGGTGGTGGTGGCAGCGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 72 bp | TCGGCCTTCAGGCCGCGAGTGTCCAGGCCGCGGCGCTaGAGCTCCTCGCGAAGTTCGTTCACCTTCAGGCGA | + |
Preference number: 6 (lower is better) Translates to: SAFRPRVSRPRR*SSSRSSFTFRR Trigger: TCGCCTGAAGGTGAACGAACTTCGCGAGGAGCTGCAGCGCCGCGGCCTGGACACTCGCGGCCTGAAGGCCGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS CAA 72 bp | TTCTCAGGGGGCGGGCCGGCCTTCCGGCCTTCCTCGTaGTATTGCCTCACCAGCTTGTCTGCCTCCTCCCGC | + |
Preference number: 6 (lower is better) Translates to: FSGGGPAFRPSS*YCLTSLSASSR Trigger: GCGGGAGGAGGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGCCGGAAGGCCGGCCCGCCCCCTGAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 72 bp | CACCACCACCTCCCCGGTTCTGGAAGCCTCCTCGGTTaGCTCCAGGAGGGCCTCGGTTGTCATACCGCTGGA | + |
Preference number: 6 (lower is better) Translates to: HHHLPGSGSLLG*LQEGLGCHTAG Trigger: TCCAGCGGTATGACAACCGAGGCCCTCCTGGAGGCAACCGAGGAGGCTTCCAGAACCGGGGAGGTGGTGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | TCAAAGCGCTTCTCAGGGGGCGGGCCGGCCTTCCGGCCTTCCTCGTaGTATTGCCTCACCAGCTTGTCTGCCTCCTCCCGCTGGAGCTCA | + |
Preference number: 6 (lower is better) Translates to: SKRFSGGGPAFRPSS*YCLTSLSASSRWSS Trigger: TGAGCTCCAGCGGGAGGAGGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGCCGGAAGGCCGGCCCGCCCCCTGAGAAGCGCTTTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | CGGAGGTGGAGGTGGTGGGGCTGTGTAGCCCTGGGTGTAGCCTCCTaGGTTGTAGGGTGGCTGGCTGTAACTCGGCTGTGGAGGGGTGTA | + |
Preference number: 6 (lower is better) Translates to: RRWRWWGCVALGVAS*VVGWLAVTRLWRGV Trigger: TACACCCCTCCACAGCCGAGTTACAGCCAGCCACCCTACAACCAAGGAGGCTACACCCAGGGCTACACAGCCCCACCACCTCCACCTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | GGCGGGCCGGCCTTCCGGCCTTCCTCGTTGTATTGCCTCACCAGCTaGTCTGCCTCCTCCCGCTGGAGCTCAATGAACAGAACCTCATCC | + |
Preference number: 6 (lower is better) Translates to: GGPAFRPSSLYCLTS*SASSRWSSMNRTSS Trigger: GGATGAGGTTCTGTTCATTGAGCTCCAGCGGGAGGAGGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGCCGGAAGGCCGGCCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | CGGAGGGTTCCGAGCAGGGCTATAGCTAGGTGGTGGTGGTGGTTGTaGTGGTGGTGGTTGTGGTGGCGGTGGCTGTTGTGGTGGTGGCTG | + |
Preference number: 6 (lower is better) Translates to: RRVPSRAIARWWWWL*WWWLWWRWLLWWWL Trigger: CAGCCACCACCACAACAGCCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | TCCCGGAGGGTTCCGAGCAGGGCTATAGCTAGGTGGTGGTGGTGGTaGTTGTGGTGGTGGTTGTGGTGGCGGTGGCTGTTGTGGTGGTGG | + |
Preference number: 6 (lower is better) Translates to: SRRVPSRAIARWWWW*LWWWLWWRWLLWWW Trigger: CCACCACCACAACAGCCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | CGGAGGGTTCCGAGCAGGGCTATAGCTAGGTGGTGGTaGTGGTTGTTGTGGTGGTGGTTGTGGTGGCGGTGG | + |
Preference number: 6 (lower is better) Translates to: RRVPSRAIARWW*WLLWWWLWWRW Trigger: CCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | TCCCGGAGGGTTCCGAGCAGGGCTATAGCTAGGTGGTaGTGGTGGTTGTTGTGGTGGTGGTTGTGGTGGCGG | + |
Preference number: 6 (lower is better) Translates to: SRRVPSRAIARW*WWLLWWWLWWR Trigger: CCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | GGCTCCCGGAGGGTTCCGAGCAGGGCTATAGCTAGGTaGTGGTGGTGGTTGTTGTGGTGGTGGTTGTGGTGG | + |
Preference number: 6 (lower is better) Translates to: GSRRVPSRAIAR*WWWLLWWWLWW Trigger: CCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCTCCGGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | AGGTGGTGGGGCTGTGTAGCCCTGGGTGTAGCCTCCTaGGTTGTAGGGTGGCTGGCTGTAACTCGGCTGTGG | + |
Preference number: 6 (lower is better) Translates to: RWWGCVALGVAS*VVGWLAVTRLW Trigger: CCACAGCCGAGTTACAGCCAGCCACCCTACAACCAAGGAGGCTACACCCAGGGCTACACAGCCCCACCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 72 bp | CCAATGGTGCCCCGTATCCGCTCACTGAGGGGGAGGTaGTGGATGAATGTGAACCCTGGGAGGACAGAGCAG | + |
Preference number: 6 (lower is better) Translates to: PMVPRIRSLRGR*WMNVNPGRTEQ Trigger: CTGCTCTGTCCTCCCAGGGTTCACATTCATCCAGCACCTCCCCCTCAGTGAGCGGATACGGGGCACCATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | AGGGTTCCGAGCAGGGCTATAGCTAGGTGGTGGTGGTaGTTGTTGTGGTGGTGGTTGTGGTGGCGGTGGCTG | + |
Preference number: 6 (lower is better) Translates to: RVPSRAIARWWW*LLWWWLWWRWL Trigger: CAGCCACCGCCACCACAACCACCACCACAACAACCACCACCACCACCTAGCTATAGCCCTGCTCGGAACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | TGTGTAGCCCTGGGTGTAGCCTCCTTGGTTGTAGGGTaGCTGGCTGTAACTCGGCTGTGGAGGGGTGTAGCT | + |
Preference number: 6 (lower is better) Translates to: CVALGVASLVVG*LAVTRLWRGVA Trigger: AGCTACACCCCTCCACAGCCGAGTTACAGCCAGCCACCCTACAACCAAGGAGGCTACACCCAGGGCTACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | CCAGCAGCAGGCAGGCCTACCATCATCAGAATCTCACACTCTGCTTaGCTCTTTGGCCCAATGGTGCCCCGTATCCGCTCACTGAGGGGG | + |
Preference number: 6 (lower is better) Translates to: PAAGRPTIIRISHSA*LFGPMVPRIRSLRG Trigger: CCCCCTCAGTGAGCGGATACGGGGCACCATTGGGCCAAAGAGCAAAGCAGAGTGTGAGATTCTGATGATGGTAGGCCTGCCTGCTGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS TCA 72 bp | ACGCCCTCTTCTGACCCCATAGCTGGCACGGGCTCCTaGCCACAGGTATGCAAAGCCCTCAATCGTCAATGG | + |
Preference number: 6 (lower is better) Translates to: TPSSDPIAGTGS*PQVCKALNRQW Trigger: CCATTGACGATTGAGGGCTTTGCATACCTGTGGTCAGGAGCCCGTGCCAGCTATGGGGTCAGAAGAGGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS GCA 72 bp | CCGGCCTTCCTCGTTGTATTGCCTCACCAGCTTGTCTaGCTCCTCCCGCTGGAGCTCAATGAACAGAACCTC | + |
Preference number: 6 (lower is better) Translates to: PAFLVVLPHQLV*LLPLELNEQNL Trigger: GAGGTTCTGTTCATTGAGCTCCAGCGGGAGGAGGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | TCCACTGCTGGGCATACTGCTGATACTGGTTATAGCTaGGCTGAGGGTAGGTCTGGGCAGTTGGGGGTGGTG | + |
Preference number: 6 (lower is better) Translates to: STAGHTADTGYS*AEGRSGQLGVV Trigger: CACCACCCCCAACTGCCCAGACCTACCCTCAGCCCAGCTATAACCAGTATCAGCAGTATGCCCAGCAGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | GCCTTCCGGCCTTCCTCGTTGTATTGCCTCACCAGCTaGTCTGCCTCCTCCCGCTGGAGCTCAATGAACAGA | + |
Preference number: 6 (lower is better) Translates to: AFRPSSLYCLTS*SASSRWSSMNR Trigger: TCTGTTCATTGAGCTCCAGCGGGAGGAGGCAGACAAGCTGGTGAGGCAATACAACGAGGAAGGCCGGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | CGCTGCCTCCGCAGGCCCATCACCCGCATCTTATCCATGATGGCATaGGTACCCAGAATGTTGTACTTCTTGGAAGGGTTGGAGGCAGCG | + |
Preference number: 6 (lower is better) Translates to: RCLRRPITRILSMMA*VPRMLYFLEGLEAA Trigger: CGCTGCCTCCAACCCTTCCAAGAAGTACAACATTCTGGGTACCAATGCCATCATGGATAAGATGCGGGTGATGGGCCTGCGGAGGCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | TTGTGGTGGTGGTTGTGGTGGCGGTGGCTGTTGTGGTGGTGGCTGTaGCTGAGGAGCCCGGTTATAGTTGCCTCGGTTGTTGGAGTTGTT | + |
Preference number: 6 (lower is better) Translates to: LWWWLWWRWLLWWWL*LRSPVIVASVVGVV Trigger: AACAACTCCAACAACCGAGGCAACTATAACCGGGCTCCTCAGCAACAGCCACCACCACAACAGCCACCGCCACCACAACCACCACCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | CTGCAAGAGTCCAAGGACCAGCCAATACGGACAACGTaGGGGTCGGGCTCTGTAGATGGAAGATGCTTCACG | + |
Preference number: 6 (lower is better) Translates to: LQESKDQPIRTT*GSGSVDGRCFT Trigger: CGTGAAGCATCTTCCATCTACAGAGCCCGACCCCCACGTTGTCCGTATTGGCTGGTCCTTGGACTCTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS CCA 72 bp | GCCCGAGTAGCCTCCATAGTCGTAGTTCCCGTAGTATaGCGGCCACTGGCTCTGGTTCTGATAGTACTGGCT | + |
Preference number: 6 (lower is better) Translates to: ARVASIVVVPVV*RPLALVLIVLA Trigger: AGCCAGTACTATCAGAACCAGAGCCAGTGGCCGCCATACTACGGGAACTACGACTATGGAGGCTACTCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 72 bp | GCAGGCCTACCATCATCAGAATCTCACACTCTGCTTTaGTCTTTGGCCCAATGGTGCCCCGTATCCGCTCAC | + |
Preference number: 6 (lower is better) Translates to: AGLPSSESHTLL*SLAQWCPVSAH Trigger: GTGAGCGGATACGGGGCACCATTGGGCCAAAGAGCAAAGCAGAGTGTGAGATTCTGATGATGGTAGGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | GGCAGGCCTACCATCATCAGAATCTCACACTCTGCTTaGCTCTTTGGCCCAATGGTGCCCCGTATCCGCTCA | + |
Preference number: 6 (lower is better) Translates to: GRPTIIRISHSA*LFGPMVPRIRS Trigger: TGAGCGGATACGGGGCACCATTGGGCCAAAGAGCAAAGCAGAGTGTGAGATTCTGATGATGGTAGGCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | TACCATCATCAGAATCTCACACTCTGCTTTGCTCTTTaGCCCAATGGTGCCCCGTATCCGCTCACTGAGGGG | + |
Preference number: 6 (lower is better) Translates to: YHHQNLTLCFAL*PNGAPYPLTEG Trigger: CCCCTCAGTGAGCGGATACGGGGCACCATTGGGCCAAAGAGCAAAGCAGAGTGTGAGATTCTGATGATGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | TCCATGATGGCATTGGTACCCAGAATGTTGTACTTCTTGGAAGGGTaGGAGGCAGCGTGTTTGATGGCCCACGTGGTCTTGCCAGCAGCA | + |
Preference number: 6 (lower is better) Translates to: SMMALVPRMLYFLEG*EAACLMAHVVLPAA Trigger: TGCTGCTGGCAAGACCACGTGGGCCATCAAACACGCTGCCTCCAACCCTTCCAAGAAGTACAACATTCTGGGTACCAATGCCATCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 72 bp | GTGGTGGTGGCTGTTGCTGAGGAGCCCGGTTATAGTTaGCTCGGTTGTTGGAGTTGTTGTTATCCCTGTTGT | + |
Preference number: 6 (lower is better) Translates to: VVVAVAEEPGYS*LGCWSCCYPCC Trigger: ACAACAGGGATAACAACAACTCCAACAACCGAGGCAACTATAACCGGGCTCCTCAGCAACAGCCACCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | GGGACATCCTTCCCTTCTTCGTCCGTTCGCTTTACTGTGCGGTCTTaGAGGTCCTCATCAGTTGGACAGATTACAATAGCTTTCCGCTGG | + |
Preference number: 6 (lower is better) Translates to: GTSFPSSSVRFTVRS*RSSSVGQITIAFRW Trigger: CCAGCGGAAAGCTATTGTAATCTGTCCAACTGATGAGGACCTCAAAGACCGCACAGTAAAGCGAACGGACGAAGAAGGGAAGGATGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 90 bp | GTTGTTGGAGTTGTTGTTATCCCTGTTGTTATTACCCCAGCGGTTTaGGTTGTAGCCACCACCTCCGCTGCGGTTGAAACCTCCTCGGTA | + |
Preference number: 6 (lower is better) Translates to: VVGVVVIPVVITPAV*VVATTSAAVETSSV Trigger: TACCGAGGAGGTTTCAACCGCAGCGGAGGTGGTGGCTACAACCAAAACCGCTGGGGTAATAACAACAGGGATAACAACAACTCCAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CCA 72 bp | CGGCCTCGATTCTCTTCAAAGGGCCTCTTTCGATTCTaGAATTGTGGTCTGTCTGTCTTGAGCTGTGAGGCT | + |
Preference number: 6 (lower is better) Translates to: RPRFSSKGLFRF*NCGLSVLSCEA Trigger: AGCCTCACAGCTCAAGACAGACAGACCACAATTCCAGAATCGAAAGAGGCCCTTTGAAGAGAATCGAGGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS CAA 72 bp | TCCATGATGGCATTGGTACCCAGAATGTTGTACTTCTaGGAAGGGTTGGAGGCAGCGTGTTTGATGGCCCAC | + |
Preference number: 6 (lower is better) Translates to: SMMALVPRMLYF*EGLEAACLMAH Trigger: GTGGGCCATCAAACACGCTGCCTCCAACCCTTCCAAGAAGTACAACATTCTGGGTACCAATGCCATCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | GTTGTTGTTATCCCTGTTGTTATTACCCCAGCGGTTTaGGTTGTAGCCACCACCTCCGCTGCGGTTGAAACC | + |
Preference number: 6 (lower is better) Translates to: VVVIPVVITPAV*VVATTSAAVET Trigger: GGTTTCAACCGCAGCGGAGGTGGTGGCTACAACCAAAACCGCTGGGGTAATAACAACAGGGATAACAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS TCA 72 bp | TCAATGGATAGCCACTACTCCGGTCTCGGGCCACTTTaGAGTGCAGGTCACAGTTATATGTGTCAATGGCCA | + |
Preference number: 6 (lower is better) Translates to: SMDSHYSGLGPL*SAGHSYMCQWP Trigger: TGGCCATTGACACATATAACTGTGACCTGCACTTCAAAGTGGCCCGAGACCGGAGTAGTGGCTATCCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS GCA 72 bp | AACCATAGGAAAAAGGCTCTTCACCTAGCTGAGTGCTaGAAGAGTCCAAGGACCAGCCAATACGGACAACGT | + |
Preference number: 6 (lower is better) Translates to: NHRKKALHLAEC*KSPRTSQYGQR Trigger: ACGTTGTCCGTATTGGCTGGTCCTTGGACTCTTGCAGCACTCAGCTAGGTGAAGAGCCTTTTTCCTATGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS CCA 72 bp | GTTGCTGAGGAGCCCGGTTATAGTTGCCTCGGTTGTTaGAGTTGTTGTTATCCCTGTTGTTATTACCCCAGC | + |
Preference number: 6 (lower is better) Translates to: VAEEPGYSCLGC*SCCYPCCYYPS Trigger: GCTGGGGTAATAACAACAGGGATAACAACAACTCCAACAACCGAGGCAACTATAACCGGGCTCCTCAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS GCA 72 bp | CATAACCATAGGAAAAAGGCTCTTCACCTAGCTGAGTaGTGCAAGAGTCCAAGGACCAGCCAATACGGACAA | + |
Preference number: 6 (lower is better) Translates to: HNHRKKALHLAE*CKSPRTSQYGQ Trigger: TTGTCCGTATTGGCTGGTCCTTGGACTCTTGCAGCACTCAGCTAGGTGAAGAGCCTTTTTCCTATGGTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043765.14 ENSMUST00000108401.3 ENSMUST00000206832.2 |
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CDS CAA 90 bp | CCCCCTAAGGCCTCTTTCTGGATTCGGAAGGCAATGCCCATCCACTaGCCATTCTTGGTAAAAGAAAGCTCCACATCATTTCCACATTCA | + |
Preference number: 6 (lower is better) Translates to: PPKASFWIRKAMPIH*PFLVKESSTSFPHS Trigger: TGAATGTGGAAATGATGTGGAGCTTTCTTTTACCAAGAATGGCAAGTGGATGGGCATTGCCTTCCGAATCCAGAAAGAGGCCTTAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | TTCCCTTCTTCGTCCGTTCGCTTTACTGTGCGGTCTTaGAGGTCCTCATCAGTTGGACAGATTACAATAGCT | + |
Preference number: 6 (lower is better) Translates to: FPSSSVRFTVRS*RSSSVGQITIA Trigger: AGCTATTGTAATCTGTCCAACTGATGAGGACCTCAAAGACCGCACAGTAAAGCGAACGGACGAAGAAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | GCCTCTTTCTGGATTCGGAAGGCAATGCCCATCCACTaGCCATTCTTGGTAAAAGAAAGCTCCACATCATTT | + |
Preference number: 6 (lower is better) Translates to: ASFWIRKAMPIH*PFLVKESSTSF Trigger: AAATGATGTGGAGCTTTCTTTTACCAAGAATGGCAAGTGGATGGGCATTGCCTTCCGAATCCAGAAAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | TGGATTCGGAAGGCAATGCCCATCCACTTGCCATTCTaGGTAAAAGAAAGCTCCACATCATTTCCACATTCA | + |
Preference number: 6 (lower is better) Translates to: WIRKAMPIHLPF*VKESSTSFPHS Trigger: TGAATGTGGAAATGATGTGGAGCTTTCTTTTACCAAGAATGGCAAGTGGATGGGCATTGCCTTCCGAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043765.14 ENSMUST00000206832.2 |
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CDS CAA 72 bp | CTCATTTTCTTGCTTGATGACTGGTGTCTCGTAGAATaGGTTCTGTCTGGTAATATTGTCCATGACATAATG | + |
Preference number: 6 (lower is better) Translates to: LIFLLDDWCLVE*VLSGNIVHDIM Trigger: CATTATGTCATGGACAATATTACCAGACAGAACCAATTCTACGAGACACCAGTCATCAAGCAAGAAAATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108401.3 ENSMUST00000206832.2 |