Pregenerated sensors for HNRNPU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039630Ensembl transcript IDs: ENSMUST00000037748.9, ENSMUST00000161769.8, ENSMUST00000188044.7, ENSMUST00000189450.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTaGTATAGCAGTAGGTACCAGCCAAAAAGCTCTAACTCCATCGAT | + |
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Preference number: 1 (lower is better) Translates to: TASVIVPIIPKCHTR*YSSRYQPKSSNSID Trigger: ATCGATGGAGTTAGAGCTTTTTGGCTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGACAGAAGCGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR GCA 90 bp | GTAGGTACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTaGTTCGATTATATAATGCGGAGGTCTATTAGAATCACTGGAACA | + |
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Preference number: 1 (lower is better) Translates to: VGTSQKALTPSMVSL*FDYIMRRSIRITGT Trigger: TGTTCCAGTGATTCTAATAGACCTCCGCATTATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTACCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR CCA 90 bp | CATTCTGCAGTTATATCTTACCATGAAAGGGAGACCTCTCTTGGCTaGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: HSAVISYHERETSLG*KHLHYSFSQQHNFY Trigger: ATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATGGTAAGATATAACTGCAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR TCA 90 bp | AATTCCTTCCAGCTTTATCATCCATTCTGCAGTTATATCTTACCATaGAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATT | + |
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Preference number: 1 (lower is better) Translates to: NSFQLYHPFCSYILP*KGDLSWLETSSLLI Trigger: AATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATGGTAAGATATAACTGCAGAATGGATGATAAAGCTGGAAGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR TCA 90 bp | CCATTTTTACTGCACAAACCCAAACTGTTGCCATCAAAACTGAAATaGAAACAAGTCCTCTCATGGACTTCACCTAGACTTAATCTATGT | + |
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Preference number: 1 (lower is better) Translates to: PFLLHKPKLLPSKLK*KQVLSWTSPRLNLC Trigger: ACATAGATTAAGTCTAGGTGAAGTCCATGAGAGGACTTGTTTTCATTTCAGTTTTGATGGCAACAGTTTGGGTTTGTGCAGTAAAAATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR TCA 90 bp | AGCATCTGTTCCCAAAGTTTCATGTATTATATGTCTATTATCAGGTaGGGACAGCCACTCACATTTCATAAACATGGTCAACTGAACATT | + |
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Preference number: 1 (lower is better) Translates to: SICSQSFMYYMSIIR*GQPLTFHKHGQLNI Trigger: AATGTTCAGTTGACCATGTTTATGAAATGTGAGTGGCTGTCCTCACCTGATAATAGACATATAATACATGAAACTTTGGGAACAGATGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR TCA 90 bp | AAGTTAGCAGCATTGTGTAGTAGTGAAATCAATGACTGGCTTGCATaGTGGCTTCTAAAAGCATCTGTTCCCAAAGTTTCATGTATTATA | + |
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Preference number: 1 (lower is better) Translates to: KLAALCSSEINDWLA*WLLKASVPKVSCII Trigger: TATAATACATGAAACTTTGGGAACAGATGCTTTTAGAAGCCATCATGCAAGCCAGTCATTGATTTCACTACTACACAATGCTGCTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR TCA 90 bp | GAAGCATTTAGGTATGCCTTTAGCATCTCAGTTCCCATCAAATTTTaGTTTGGCTTCAATTTTTGGCCAGTATCAACTTGTTCAAATATG | + |
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Preference number: 1 (lower is better) Translates to: EAFRYAFSISVPIKF*FGFNFWPVSTCSNM Trigger: CATATTTGAACAAGTTGATACTGGCCAAAAATTGAAGCCAAATCAAAATTTGATGGGAACTGAGATGCTAAAGGCATACCTAAATGCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACCCTTAGTCCTTCCATaGATCTGGCTGCTAACATTG | + |
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Preference number: 2 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKPLVLP*IWLLTL Trigger: CAATGTTAGCAGCCAGATTCATGGAAGGACTAAGGG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CCA 90 bp | ATACCCTCCATGTACACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATAAATGTCATACTAGGTaGTATAGCAGTAGGTACCAG | + |
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Preference number: 2 (lower is better) Translates to: IPSMYTASVIVPIIPKCHKCHTR*YSSRYQ Trigger: CTGGTACCTACTGCTATACCACCTAGTATGACATTT...ATGACATTTCGGGATTATCGGGACAATGACAGAAGCGGTGTACATGGAGGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161769.8 ENSMUST00000188044.7 ENSMUST00000189450.2 |
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| 3UTR CAA 90 bp | TCATCCATTCTGCAGTTATATCTTACCATGAAAGGGAGACCTCTCTaGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACT | + |
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Preference number: 2 (lower is better) Translates to: SSILQLYLTMKGRPL*AGNIFTTHFHSSTT Trigger: AGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATGGTAAGATATAACTGCAGAATGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATGGAAAAGGCTCTCCATaGGAGCAACGGAGTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: CFSIMETQHALPLKFKAYGKGSP*EQRSVL Trigger: CAAAACACTCCGTTGCTCTCATGGAGAGCCTTTTCC...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CCA 90 bp | CATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGAAATGTCATACTAGGTaGTATAGCAGTAGGTACCAG | + |
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Preference number: 2 (lower is better) Translates to: HERETSLGWKHLHYSFSQKCHTR*YSSRYQ Trigger: CTGGTACCTACTGCTATACCACCTAGTATGACATTT...CTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161769.8 ENSMUST00000188044.7 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACCAGCACAGCACATTCACATaGACAGAAAAGCTTCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: IVPIIPKCHTRWYSSRYQHSTFT*TEKLLK Trigger: TTTTAGAAGCTTTTCTGTCCATGTGAATGTGCTGTG...CTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189450.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATAAGGGATTTAGACCTTaGTGGCGAGAATCCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: CFSIMETQHALPLKFKAYKGFRP*WRESQT Trigger: TGTTTGGGATTCTCGCCATCAAGGTCTAAATCCCTT...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAAATAAACATGGTCAACTaGACATTAACTTCTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKINMVN*TLTSPS Trigger: GCTGGGAGAAGTTAATGTTCAGTTGACCATGTTTAT...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCTACAGTTTGACTCCTaGTTCCTCACTTCACACAGT | + |
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Preference number: 2 (lower is better) Translates to: CFSIMETQHALPLKFKAYLQFDS*FLTSHS Trigger: ACTGTGTGAAGTGAGGAATCAGGAGTCAAACTGTAG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR GCA 90 bp | ACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATGTACATCGATGGTTTCCCTTTaGTTCGATTATATAATGCGG | + |
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Preference number: 2 (lower is better) Translates to: TSSLLIFTAAQLLYPPCTSMVSL*FDYIMR Trigger: CCGCATTATATAATCGAAGCAAAGGGAAACCATCGA...TGTACATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATAAAACTATCAAGCATTaGCAAGTACTGACCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: CFSIMETQHALPLKFKAYKTIKH*QVLTQA Trigger: TGCCTGGGTCAGTACTTGGCAATGCTTGATAGTTTT...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCCCTGTAACTCAAACTaGCTAGAACTTTCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: CFSIMETQHALPLKFKAYPCNSN*LELSIF Trigger: GAAGATGGAAAGTTCTAGGCAGTTTGAGTTACAGGG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAACCTTCCCCAGCTTTTaGCTCTGCTGGTACTTAATT | + |
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Preference number: 2 (lower is better) Translates to: HFSWFRYILNFVIKTSFPTFPSF*LCWYLI Trigger: AATTAAGTACCAGCAGAGCCAAAAGCTGGGGAAGGT...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATGGATGGAGTGTATCATaGGCAGTACAGAATCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: CFSIMETQHALPLKFKAYGWSVS*AVQNLN Trigger: ATTAAGATTCTGTACTGCTCATGATACACTCCATCC...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR TCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAAATGACTGGCTTGCATaGTGGCTTCTAAAAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: HFSWFRYILNFVIKTSFPNDWLA*WLLKAS Trigger: AGATGCTTTTAGAAGCCATCATGCAAGCCAGTCATT...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATAGCAACGGAGTGTTTTaGACAAACCACAAAACTATC | + |
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Preference number: 2 (lower is better) Translates to: CFSIMETQHALPLKFKAYSNGVF*TNHKTI Trigger: GATAGTTTTGTGGTTTGTCCAAAACACTCCGTTGCT...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR CAA 90 bp | GCATGTTCAGCTAAGTTAAAAAGTAAACCTCTACACTCACTTCTCTaGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: ACSAKLKSKPLHSLL*VQVYTKFCHKDLFP Trigger: GGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTGAGTGTAGAGGTTTACTTTTTAACTTAGCTGAACATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR TCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACATCTTCCTTTTATTTaGAGCATGCCTTGTATCTAC | + |
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Preference number: 2 (lower is better) Translates to: HFSWFRYILNFVIKTSFPHLPFI*SMPCIY Trigger: GTAGATACAAGGCATGCTTCAAATAAAAGGAAGATG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR GCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAACTGTTCTATACCAATaGTGCATTATCTCCTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: HFSWFRYILNFVIKTSFPTVLYQ*CIISFN Trigger: ATTGAAGGAGATAATGCAGCATTGGTATAGAACAGT...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR TCA 72 bp | GAGGACAGCCACTCACATTTCATAAACATGGTCAACTaGACATTAACTTCTCCCAGCCAGTACCTTTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: EDSHSHFINMVN*TLTSPSQYLCP Trigger: GGGGCAAAGGTACTGGCTGGGAGAAGTTAATGTTCAGTTGACCATGTTTATGAAATGTGAGTGGCTGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR CCA 72 bp | GTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTaGTATAGCAGTAGGTACCAGCCAAAAAGCTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: VIVPIIPKCHTR*YSSRYQPKSSN Trigger: GTTAGAGCTTTTTGGCTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR CCA 72 bp | GTTATATCTTACCATGAAAGGGAGACCTCTCTTGGCTaGAAACATCTTCACTACTCATTTTCACAGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: VISYHERETSLG*KHLHYSFSQQH Trigger: GTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATGGTAAGATATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR TCA 72 bp | CTGCACAAACCCAAACTGTTGCCATCAAAACTGAAATaGAAACAAGTCCTCTCATGGACTTCACCTAGACTT | + |
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Preference number: 3 (lower is better) Translates to: LHKPKLLPSKLK*KQVLSWTSPRL Trigger: AAGTCTAGGTGAAGTCCATGAGAGGACTTGTTTTCATTTCAGTTTTGATGGCAACAGTTTGGGTTTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTCCCAGCCAGTACCTTaGCCCCTCATAAATGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: CFSIMETQHALPLKFKAYSQPVP*PLINVK Trigger: TTTAACATTTATGAGGGGCAAAGGTACTGGCTGGGA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATACTCTTAGAAAGCCATaGGGTTGCCTTTTGAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: CFSIMETQHALPLKFKAYTLRKP*GCLLRV Trigger: TACCCTCAAAAGGCAACCCAATGGCTTTCTAAGAGT...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR TCA 72 bp | GCATTGTGTAGTAGTGAAATCAATGACTGGCTTGCATaGTGGCTTCTAAAAGCATCTGTTCCCAAAGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: ALCSSEINDWLA*WLLKASVPKVS Trigger: TGAAACTTTGGGAACAGATGCTTTTAGAAGCCATCATGCAAGCCAGTCATTGATTTCACTACTACACAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR GCA 72 bp | GTTTATGGCATACTCCTTAAGAGAATAACCTGCGTGTaGTGTAAGGAAACATGTTCCCTAACAAATGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VYGILLKRITCV*CKETCSLTNAS Trigger: AGAAGCATTTGTTAGGGAACATGTTTCCTTACAGCACACGCAGGTTATTCTCTTAAGGAGTATGCCATAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR GCA 72 bp | AGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTaGTTCGATTATATAATGCGGAGGTCTATTAGAATC | + |
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Preference number: 3 (lower is better) Translates to: SQKALTPSMVSL*FDYIMRRSIRI Trigger: GATTCTAATAGACCTCCGCATTATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| 3UTR GCA 72 bp | TTGAAGCATGCCTTGTATCTACTCTATTTGCTCAAATaGCAAGCTAAAAATCATACAAGGAAAAGGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LKHALYLLYLLK*QAKNHTRKRLS Trigger: GGAGAGCCTTTTCCTTGTATGATTTTTAGCTTGGCATTTGAGCAAATAGAGTAGATACAAGGCATGCTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAGAGCAACGGAGTGTTTaGGACAAACCACAAAACTAT | + |
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Preference number: 3 (lower is better) Translates to: HFSWFRYILNFVIKTSFPEQRSV*DKPQNY Trigger: ATAGTTTTGTGGTTTGTCCAAAACACTCCGTTGCTC...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR TCA 72 bp | AGGTATGCCTTTAGCATCTCAGTTCCCATCAAATTTTaGTTTGGCTTCAATTTTTGGCCAGTATCAACTTGT | + |
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Preference number: 3 (lower is better) Translates to: RYAFSISVPIKF*FGFNFWPVSTC Trigger: ACAAGTTGATACTGGCCAAAAATTGAAGCCAAATCAAAATTTGATGGGAACTGAGATGCTAAAGGCATACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR GCA 72 bp | TGCTACACAAGGTGTTCAGTTGTCCAAAGAAATAAATaGCTAGAACCTCTTGGAGGTTTTTACAGAATATAC | + |
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Preference number: 3 (lower is better) Translates to: CYTRCSVVQRNK*LEPLGGFYRIY Trigger: GTATATTCTGTAAAAACCTCCAAGAGGTTCTAGGCATTTATTTCTTTGGACAACTGAACACCTTGTGTAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTATAGAATTATGCCATaGCTACACAAGGTGTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: CFSIMETQHALPLKFKAYYRIMP*LHKVFS Trigger: ACTGAACACCTTGTGTAGCAATGGCATAATTCTATA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACCATCTTCCTTTTATTaGAAGCATGCCTTGTATCTA | + |
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Preference number: 3 (lower is better) Translates to: HFSWFRYILNFVIKTSFPPSSFY*KHALYL Trigger: TAGATACAAGGCATGCTTCAAATAAAAGGAAGATGG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| 3UTR CCA 72 bp | GCTATATCATTCCTAAGTTCGTTCTTTCAACCTATTTaGCATCAAACCCATGAATTTGCAAATAAAGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: AISFLSSFFQPI*HQTHEFANKVA Trigger: TGCTACTTTATTTGCAAATTCATGGGTTTGATGCCAAATAGGTTGAAAGAACGAACTTAGGAATGATATAGC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| CDS-3UTR GCA 90 bp | ATACCCTCCATGTACACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATTGCTGGGAAGGCTGCTaGTGCGCCGCCGCTGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: IPSMYTASVIVPIIPKCHCWEGC*CAAAAG Trigger: GCCGGCAGCGGCGGCGCAGCAGCAGCCTTCCCAGCA...ATGACATTTCGGGATTATCGGGACAATGACAGAAGCGGTGTACATGGAGGGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR GCA 90 bp | TGGTATAGCAGTAGGTACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTGGGGCCGCTGCTCTTaGCCGCGGCCTCCTTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: WYSSRYQPKSSNSIDGFPWGRCS*PRPPCR Trigger: CCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCA...AGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTACCTACTGCTATACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR GCA 90 bp | TACACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATCCAGCCGCGGCCTCCTaGTCTAGGCCCGCTCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: YTASVIVPIIPKCHTRWYPAAAS*SRPAPE Trigger: CTCGGGAGCGGGCCTAGAGCAGGAGGCCGCGGCTGG...ATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGACAGAAGCGGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR GCA 90 bp | AGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTGCGAGGTGGGGCCGCTaGTCTTGCCCGCGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLLAGNIFTTHFHSSTTARWGR*SCPRPP Trigger: AGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGC...AGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | ACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCCCGCGAAGAGCGAGGTaGGGCCGCTGCTCTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TASVIVPIIPKCHTRWYSPRRAR*GRCSCP Trigger: CGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGG...GCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGACAGAAGCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTCCTCCCGCCTGCTGTTaGCCCTGCCTCGCCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASVIVPIIPKCHTRWYSSPPACC*PCLAPG Trigger: GCCAGGGGCGAGGCAGGGCCAACAGCAGGCGGGAGG...ACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGACAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTGACTGCTGCTCCCCGTaGCCGTTCTCGTCGCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASVIVPIIPKCHTRWYSSDCCSP*PFSSPA Trigger: CGCGGGCGACGAGAACGGTCACGGGGAGCAGCAGTC...ACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGACAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR CCA 90 bp | TATACCCTCCATGTACACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATCGCCCAGCTCCATCTaGTCGCCGTCCAGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YTLHVHRFCHCPDNPEMSSPSSI*SPSRAA Trigger: CGCCGCTCTGGACGGCGACCAGATGGAGCTGGGCGA...TGACATTTCGGGATTATCGGGACAATGACAGAAGCGGTGTACATGGAGGGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAATGGGGCCGCTGCTCTTaGCCGCGGCCTCCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKWGRCS*PRPPCR Trigger: CCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCA...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATACGTTCCCGGGCTCCATaGCGGGGCGGCCTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQKALTPSMVSLCFDYIRSRAP*RGGLLP Trigger: AGGCAGGAGGCCGCCCCGCCATGGAGCCCGGGAACG...TATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACCTCCCGCCTGCTGTTaGCCCTGCCTCGCCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKPPACC*PCLAPG Trigger: GCCAGGGGCGAGGCAGGGCCAACAGCAGGCGGGAGG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACGCGAGGTGGGGCCGCTaGTCTTGCCCGCGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYARWGR*SCPRPP Trigger: AGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGC...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | CCATCGATGGTTTCCCTTTGCTTCGATTATATAATGCGGAGGTCTATTAGAATCCCGTCTCCTCCCGCCTaGTGTTGGCCCTGCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSMVSLCFDYIMRRSIRIPSPPA*CWPCLA Trigger: GGCGAGGCAGGGCCAACAGCAGGCGGGAGGAGACGG...GATTCTAATAGACCTCCGCATTATATAATCGAAGCAAAGGGAAACCATCGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCCAGCCGCGGCCTCCTaGTCTAGGCCCGCTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYPAAAS*SRPAPE Trigger: CTCGGGAGCGGGCCTAGAGCAGGAGGCCGCGGCTGG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTGCTGGGAAGGCTGCTaGTGCGCCGCCGCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYCWEGC*CAAAAG Trigger: GCCGGCAGCGGCGGCGCAGCAGCAGCCTTCCCAGCA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACCCGTCTCCTCCCGCCTaGTGTTGGCCCTGCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYPSPPA*CWPCLA Trigger: GGCGAGGCAGGGCCAACAGCAGGCGGGAGGAGACGG...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| CDS-3UTR CCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCGTTCCCGGGCTCCATaGCGGGGCGGCCTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYRSRAP*RGGLLP Trigger: AGGCAGGAGGCCGCCCCGCCATGGAGCCCGGGAACG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | ATATCTTACCATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATCGTCTTCCCCCTCCTaGAAGCCCTGGTCGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ISYHERETSLGWKHLHYSSSSPS*KPWSSP Trigger: CGGCGACGACCAGGGCTTCCAGGAGGGGGAAGACGA...TGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATGGTAAGATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR TCA 90 bp | TGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTAGAGGCGCCGCTTCTTaGGCTCCTCCTTCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WLETSSLLIFTAAQLLYPRGAAS*APPSAP Trigger: CGGAGCTGAAGGAGGAGCTCAAGAAGCGGCGCCTCT...AGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATGACTGCTGCTCCCCGTaGCCGTTCTCGTCGCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYDCCSP*PFSSPA Trigger: CGCGGGCGACGAGAACGGTCACGGGGAGCAGCAGTC...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATGTACACCCACCTAGGTCGAGACTaGCGTTCCCGGGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IFTTHFHSSTTSIPSMYTHLGRD*RSRAPW Trigger: CCATGGAGCCCGGGAACGGCAGTCTCGACCTAGGTG...GGTGTACATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACTCGCCCAGCTCCATCTaGTCGCCGTCCAGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYSPSSI*SPSRAA Trigger: CGCCGCTCTGGACGGCGACCAGATGGAGCTGGGCGA...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCCGCGAAGAGCGAGGTaGGGCCGCTGCTCTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYPRRAR*GRCSCP Trigger: CGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR TCA 90 bp | GAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACGGCCACCACCTCTGTTaGACTGGTTCTTGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGWKHLHYSFSQQHNGHHLC*TGSCHS Trigger: AGAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCC...GTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACCAGCCAGTAATTCCCTCTGTTTaGGTAACCACCTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPIIPKCHTRWYSSRYQPVIPSV*VTTSAR Trigger: CCTGGCCGAGGTGGTTACTCAAACAGAGGGAATTAC...TGGCTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161769.8 ENSMUST00000188044.7 |
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| CDS-3UTR CCA 90 bp | AGGTACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTACCTCCACGGCCTCTATaGCCACCACCTCTGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RYQPKSSNSIDGFPLLRLPPRPL*PPPLLN Trigger: GTTCAACAGAGGTGGTGGCCATAGAGGCCGTGGAGG...TAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR TCA 90 bp | GTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACCAGCCAGCAGACTTTGCCTTTTaGCACACCGTAGGAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPIIPKCHTRWYSSRYQPADFAF*HTVGSS Trigger: AGAGCTTCCTACGGTGTGTCAAAAGGCAAAGTCTGC...TGGCTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR GCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACCACCTAGGTCGAGACTaGCGTTCCCGGGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYHLGRD*RSRAPW Trigger: CCATGGAGCCCGGGAACGGCAGTCTCGACCTAGGTG...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| CDS-3UTR GCA 90 bp | TACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATCTCGTCTTCCGACGCTaGCTCCTCTTCCTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: YQPKSSNSIDGFPLLRLYLVFRR*LLFLHR Trigger: GCGATGGAGGAAGAGGAGGCAGCGTCGGAAGACGAG...ATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATAGAGGCGCCGCTTCTTaGGCTCCTCCTTCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYRGAAS*APPSAP Trigger: CGGAGCTGAAGGAGGAGCTCAAGAAGCGGCGCCTCT...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| CDS-3UTR GCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACGTCCAGAGCGGCGATaGCCTCCTCCTCCTCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPRPERR*PPPPRR Trigger: ACGACGAGGAGGAGGAGGGCATCGCCGCTCTGGACG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| CDS-3UTR GCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACCTCGTCTTCCGACGCTaGCTCCTCTTCCTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYLVFRR*LLFLHR Trigger: GCGATGGAGGAAGAGGAGGCAGCGTCGGAAGACGAG...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| CDS-3UTR CCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCATCGTCTTCCCCCTCCTaGAAGCCCTGGTCGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPSSSPS*KPWSSP Trigger: CGGCGACGACCAGGGCTTCCAGGAGGGGGAAGACGA...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
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| CDS-3UTR CCA 90 bp | GGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAGCAACATTCCACTTGTaGTTAGTGACCAGCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPLLAGNIFTTHFHSSTATFHL*LVTSQS Trigger: GGATTGGCTGGTCACTAACCACAAGTGGAATGTTGC...TGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
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| CDS-3UTR TCA 90 bp | ATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATGTACACCGTAATTCCCTCTGTTTaGGTAACCACCTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFTTHFHSSTTSIPSMYTVIPSV*VTTSAR Trigger: CCTGGCCGAGGTGGTTACTCAAACAGAGGGAATTAC...GGTGTACATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161769.8 ENSMUST00000188044.7 |
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| CDS-3UTR GCA 90 bp | TGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCTTTCTGTTCTGTTTTaGCGTCTCCTCCCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLETSSLLIFTAAQLLYPLSVLF*RLLPPA Trigger: AGCAGGCGGGAGGAGACGGCAAAACAGAACAGAAAG...AGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACCCTCCTGGAAGCCCTaGTCGTCGCCGTTCTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPPSWKP*SSPFSS Trigger: AGACGAGAACGGCGACGACCAGGGCTTCCAGGAGGG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCCTTGCCAAGACACTGTaGGGCTCTCTGCAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAGNIFTTHFHSSTTSIPLAKTL*GSLQQC Trigger: ACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAG...GGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTTACCATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCAACAACAGCTTTCCGCTaGAAGCCTGCAAACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISYHERETSLGWKHLHYSTTAFR*KPANRH Trigger: GTGCCTGTTTGCAGGCTTCCAGCGGAAAGCTGTTGT...TGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATGGTAAGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACTTTCTGTTCTGTTTTaGCGTCTCCTCCCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKLSVLF*RLLPPA Trigger: AGCAGGCGGGAGGAGACGGCAAAACAGAACAGAAAG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | ACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCGAGGAGACTTGGCTCTaGTGTACTTGTTTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TASVIVPIIPKCHTRWYSEETWL*CTCFLR Trigger: TCGAAGAAAACAAGTACAGCAGAGCCAAGTCTCCTC...GCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGACAGAAGCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAGGTACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCCAGTATCTGCCATTTaGTTCTTAAAACCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSRYQPKSSNSIDGFPLLPVSAI*FLKPAT Trigger: GGTGGCAGGTTTTAAGAAGCAAATGGCAGATACTGG...AAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTACCTACTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATGTACACCCTCTTCAGGTCCTTTTaGTCCTCTAACTCGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFTTHFHSSTTSIPSMYTLFRSF*SSNSVL Trigger: GAGGACCGAGTTAGAGGACCAAAAGGACCTGAAGAG...GGTGTACATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAAACAACAGCTTTCCGCTaGAAGCCTGCAAACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKTTAFR*KPANRH Trigger: GTGCCTGTTTGCAGGCTTCCAGCGGAAAGCTGTTGT...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTCTTCAACAGGTGGCTaGGGAGACTTGGCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYSSTGG*GDLALL Trigger: CAGCAGAGCCAAGTCTCCTCAGCCACCTGTTGAAGA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR TCA 90 bp | TGGTATAGCAGTAGGTACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTATTTCCTCGTCCTCTaGAGTTCTGGTTATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WYSSRYQPKSSNSIDGFPYFLVL*SSGYSS Trigger: GGAACTATAACCAGAACTTCAGAGGACGAGGAAATA...AGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTACCTACTGCTATACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCCAGGGTTTTCAGCTaGATGTTTAGTAACCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLETSSLLIFTAAQLLYPPRVFS*MFSNPG Trigger: ACCTGGGTTACTAAACATGCAGCTGAAAACCCTGGG...AGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | TACACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATTTTCCGCTGGAAGCCTaGAAACAGGCACATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTASVIVPIIPKCHTRWYFPLEA*KQAHFS Trigger: AGAAAAATGTGCCTGTTTGCAGGCTTCCAGCGGAAA...ATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGACAGAAGCGGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | ACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATGTACACTTCCCCTCTACTTCTaGCTTCTTCTGTGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSLLIFTAAQLLYPPCTLPLYF*LLLCPL Trigger: CAGAGGACACAGAAGAAGGCAGAAGTAGAGGGGAAG...TGTACATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCATCAAAGCATTCTaGAACCTCTGGAAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGWKHLHYSFSQQHNFIKAF*NLWKGE Trigger: TTCACCCTTCCAGAGGTTGCAGAATGCTTTGATGAA...GTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATGTACACCGCAGTTTTTCCAGCTCCTaGCAAGCCAATCATCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LHYSFSQQHNFYTLHVHRSFSSS*QANHHY Trigger: GTAATGATGATTGGCTTGCCAGGAGCTGGAAAAACT...GCGGTGTACATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAGGTACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTTTGCTTCTTTTCTGGTaGCAGTGCCTTTTTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRYQPKSSNSIDGFPLLLLLFW*QCLFAF Trigger: GAAAGCAAAAAGGCACTGCCACCAGAAAAGAAGCAA...AAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTACCTACTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACCTCCACGGCCTCTATaGCCACCACCTCTGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPPPRPL*PPPLLN Trigger: GTTCAACAGAGGTGGTGGCCATAGAGGCCGTGGAGG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| 3UTR CAA 72 bp | TCAATGAACCTTTGGCTGCCTACTCTTAGAAAGCCATaGGGTTGCCTTTTGAGGGTACAGCCATTTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SMNLWLPTLRKP*GCLLRVQPFLL Trigger: CAGTAAAAATGGCTGTACCCTCAAAAGGCAACCCAATGGCTTTCTAAGAGTAGGCAGCCAAAGGTTCATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACGCAGACTTTGCCTTTTaGCACACCGTAGGAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYADFAF*HTVGSS Trigger: AGAGCTTCCTACGGTGTGTCAAAAGGCAAAGTCTGC...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR TCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAGGCCACCACCTCTGTTaGACTGGTTCTTGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPGHHLC*TGSCHS Trigger: AGAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCC...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACCCAGGGTTTTCAGCTaGATGTTTAGTAACCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKPRVFS*MFSNPG Trigger: ACCTGGGTTACTAAACATGCAGCTGAAAACCCTGGG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACGTGGCAGTGCCTTTTTaGTTTCTTCTTTATATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RETSLGWKHLHYSFSQQHVAVPF*FLLYIA Trigger: AGCAATATAAAGAAGAAAGCAAAAAGGCACTGCCAC...GTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | CCATCGATGGTTTCCCTTTGCTTCGATTATATAATGCGGAGGTCTATTAGAATCGTGGCTGAGGAGACTTaGCTCTGCTGTACTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSMVSLCFDYIMRRSIRIVAEET*LCCTCF Trigger: AAAACAAGTACAGCAGAGCCAAGTCTCCTCAGCCAC...GATTCTAATAGACCTCCGCATTATATAATCGAAGCAAAGGGAAACCATCGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACCTCTTCAGGTCCTTTTaGTCCTCTAACTCGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYLFRSF*SSNSVL Trigger: GAGGACCGAGTTAGAGGACCAAAAGGACCTGAAGAG...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCTTGCCAAGACACTGTaGGGCTCTCTGCAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYLAKTL*GSLQQC Trigger: ACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCCACATTTTTCTTCTCTaGGCAGCAGCAGACACATTT | + |
|
Preference number: 4 (lower is better) Translates to: MKGRPLLAGNIFTTHFHSHIFLL*AAADTF Trigger: AAATGTGTCTGCTGCTGCCCAGAGAAGAAAAATGTG...GCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAGTAATTCCCTCTGTTTaGGTAACCACCTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPVIPSV*VTTSAR Trigger: CCTGGCCGAGGTGGTTACTCAAACAGAGGGAATTAC...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACCAGCCAAAAAGCTATTATTTCCTCGTCCTCTaGAGTTCTGGTTATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPKCHTRWYSSRYQPKSYYFLVL*SSGYSS Trigger: GGAACTATAACCAGAACTTCAGAGGACGAGGAAATA...ATAGCTTTTTGGCTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188044.7 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACCAGTATCTGCCATTTaGTTCTTAAAACCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKPVSAI*FLKPAT Trigger: GGTGGCAGGTTTTAAGAAGCAAATGGCAGATACTGG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTCTTTTCTGGTGGCAGTaGCTTTTTGCTTTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLLAGNIFTTHFHSSTTLFWWQ*LFAFFF Trigger: AAAGAAGAAAGCAAAAAGGCACTGCCACCAGAAAAG...AGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACGCAACATTCCACTTGTaGTTAGTGACCAGCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYATFHL*LVTSQS Trigger: GGATTGGCTGGTCACTAACCACAAGTGGAATGTTGC...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCACTGTGGGGCTCTCTaGAACAGTGTGTTCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYHCGAL*NSVFSF Trigger: AAAACTGAACACACTGTTGCAGAGAGCCCCACAGTG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACTTTCCGCTGGAAGCCTaGAAACAGGCACATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYFPLEA*KQAHFS Trigger: AGAAAAATGTGCCTGTTTGCAGGCTTCCAGCGGAAA...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACTTCCCCTCTACTTCTaGCTTCTTCTGTGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPLPLYF*LLLCPL Trigger: CAGAGGACACAGAAGAAGGCAGAAGTAGAGGGGAAG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATGTGGCTGAGGAGACTTaGCTCTGCTGTACTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYVAEET*LCCTCF Trigger: AAAACAAGTACAGCAGAGCCAAGTCTCCTCAGCCAC...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | CATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGACAGTCTTCAGGTATTaGAAAGTATGGCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HERETSLGWKHLHYSFSQTVFRY*KVWLFL Trigger: AAGGAAAAGCCATACTTTCCAATACCTGAAGACTGT...CTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATAATGCGGCAGACACATTTGTCTaGTCCAGAATAAAATTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKSSNSIDGFPLLRLYNAADTFV*SRIKFR Trigger: GCGAAATTTTATTCTGGATCAGACAAATGTGTCTGC...CGCATTATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACTATTTCCTCGTCCTCTaGAGTTCTGGTTATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYYFLVL*SSGYSS Trigger: GGAACTATAACCAGAACTTCAGAGGACGAGGAAATA...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCCTTCTGTCTCACAGTTaGATGTTTTTATTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGNIFTTHFHSSTTSIPSLLSHS*MFLFLS Trigger: TGAAAGGAATAAAAACATGCAACTGTGAGACAGAAG...GGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | TTAATTCCTTCCAGCTTTATCATCCATTCTGCAGTTATATCTTACCATGAAAGGCACTGTGGGGCTCTCTaGAACAGTGTGTTCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPSSFIIHSAVISYHERHCGAL*NSVFSF Trigger: AAAACTGAACACACTGTTGCAGAGAGCCCCACAGTG...CCTTTCATGGTAAGATATAACTGCAGAATGGATGATAAAGCTGGAAGGAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACTTTTCTGGTGGCAGTaGCTTTTTGCTTTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKLFWWQ*LFAFFF Trigger: AAAGAAGAAAGCAAAAAGGCACTGCCACCAGAAAAG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACAGTTTTTCCAGCTCCTaGCAAGCCAATCATCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYSFSSS*QANHHY Trigger: GTAATGATGATTGGCTTGCCAGGAGCTGGAAAAACT...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCATAGTCTTCATCTTTTaGGCACACTACAACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAGNIFTTHFHSSTTSIPIVFIF*AHYNSF Trigger: AAAGCTGTTGTAGTGTGCCCAAAAGATGAAGACTAT...GGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACTTGCTTCTTTTCTGGTaGCAGTGCCTTTTTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYLLLFW*QCLFAF Trigger: GAAAGCAAAAAGGCACTGCCACCAGAAAAGAAGCAA...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCCACCTCTGTTGAACTaGTTCTTGCCACTCTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYPPLLN*FLPLLF Trigger: GAATAAGAGTGGCAAGAACCAGTTCAACAGAGGTGG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAGAGGAGACTTGGCTCTaGTGTACTTGTTTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPEETWL*CTCFLR Trigger: TCGAAGAAAACAAGTACAGCAGAGCCAAGTCTCCTC...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | CCATCGATGGTTTCCCTTTGCTTCGATTATATAATGCGGAGGTCTATTAGAATCCAGTTTTCCAGTATCTaGCATTTGCTTCTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSMVSLCFDYIMRRSIRIQFSSI*HLLLKT Trigger: GGTTTTAAGAAGCAAATGGCAGATACTGGAAAACTG...GATTCTAATAGACCTCCGCATTATATAATCGAAGCAAAGGGAAACCATCGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATAATGCGGAGGTCTATAGGTATTGGAAAGTATaGCTTTTCCTTTTGACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNSIDGFPLLRLYNAEVYRYWKV*LFLLTE Trigger: TTCGGTCAAAAGGAAAAGCCATACTTTCCAATACCT...ATAGACCTCCGCATTATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCACATTTTTCTTCTCTaGGCAGCAGCAGACACATTT | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYHIFLL*AAADTF Trigger: AAATGTGTCTGCTGCTGCCCAGAGAAGAAAAATGTG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TTAATTCCTTCCAGCTTTATCATCCATTCTGCAGTTATATCTTACCATGAAAGGCCACCTCTGTTGAACTaGTTCTTGCCACTCTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIPSSFIIHSAVISYHERPPLLN*FLPLLF Trigger: GAATAAGAGTGGCAAGAACCAGTTCAACAGAGGTGG...CCTTTCATGGTAAGATATAACTGCAGAATGGATGATAAAGCTGGAAGGAATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATGCAGACACATTTGTCTaGTCCAGAATAAAATTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYADTFV*SRIKFR Trigger: GCGAAATTTTATTCTGGATCAGACAAATGTGTCTGC...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACTTCTGTCTCACAGTTaGATGTTTTTATTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKLLSHS*MFLFLS Trigger: TGAAAGGAATAAAAACATGCAACTGTGAGACAGAAG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCATTCATCAAAGCATTCTaGAACCTCTGGAAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPFIKAF*NLWKGE Trigger: TTCACCCTTCCAGAGGTTGCAGAATGCTTTGATGAA...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACTTTCTTCTTTATATTaGTCCAAAAGCTTTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKLSSLY*SKSFWA Trigger: AGCCCAAAAGCTTTTGGAGCAATATAAAGAAGAAAG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATCTTTCTTCTTTATATTaGTCCAAAAGCTTTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YQPKSSNSIDGFPLLRLYLSSLY*SKSFWA Trigger: AGCCCAAAAGCTTTTGGAGCAATATAAAGAAGAAAG...ATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACAGGTATTGGAAAGTATaGCTTTTCCTTTTGACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYRYWKV*LFLLTE Trigger: TTCGGTCAAAAGGAAAAGCCATACTTTCCAATACCT...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACACAGTCTTCAGGTATTaGAAAGTATGGCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVYGKQLKNESWSVVICYTVFRY*KVWLFL Trigger: AAGGAAAAGCCATACTTTCCAATACCTGAAGACTGT...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATGTGGCAGTGCCTTTTTaGTTTCTTCTTTATATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSIMETQHALPLKFKAYVAVPF*FLLYIA Trigger: AGCAATATAAAGAAGAAAGCAAAAAGGCACTGCCAC...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACAGTTTTCCAGTATCTaGCATTTGCTTCTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPQFSSI*HLLLKT Trigger: GGTTTTAAGAAGCAAATGGCAGATACTGGAAAACTG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CCA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAATAGTCTTCATCTTTTaGGCACACTACAACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HFSWFRYILNFVIKTSFPIVFIF*AHYNSF Trigger: AAAGCTGTTGTAGTGTGCCCAAAAGATGAAGACTAT...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| 3UTR CAA 72 bp | ATGCCTTTAGCATCTCAGTTCCCATCAAATTTTGATTaGGCTTCAATTTTTGGCCAGTATCAACTTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MPLASQFPSNFD*ASIFGQYQLVQ Trigger: TTGAACAAGTTGATACTGGCCAAAAATTGAAGCCAAATCAAAATTTGATGGGAACTGAGATGCTAAAGGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS GCA 90 bp | GTGGGGCCGCTGCTCTTGCCCGCGGCCTCCTTGCCGGCACCACGCTaGTGGGAAGGCTGCTGCTGCGCCGCCGCTGCCGGCGGTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VGPLLLPAASLPAPR*WEGCCCAAAAGGWD Trigger: GTCCCAACCGCCGGCAGCGGCGGCGCAGCAGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | GGGCCGCTGCTCTTGCCCGCGGCCTCCTTGCCGGCACCACGCTGCTaGGAAGGCTGCTGCTGCGCCGCCGCTGCCGGCGGTTGGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPLLLPAASLPAPRC*EGCCCAAAAGGWDC Trigger: GCAGTCCCAACCGCCGGCAGCGGCGGCGCAGCAGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | CCTGCCTCGCCCCTGGCGGCGCCACCGTCACCGCGAAGAGCGAGGTaGGGCCGCTGCTCTTGCCCGCGGCCTCCTTGCCGGCACCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: PASPLAAPPSPRRAR*GRCSCPRPPCRHHA Trigger: AGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGGTGGCGCCGCCAGGGGCGAGGCAGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS TCA 90 bp | TGCTGCTGCGCCGCCGCTGCCGGCGGTTGGGACTGCTGCTCCCCGTaGCCGTTCTCGTCGCCCGCGCCCTCCTCCTCGTCGCCGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CCCAAAAGGWDCCSP*PFSSPAPSSSSPSS Trigger: CGAGCTCGGCGACGAGGAGGAGGGCGCGGGCGACGAGAACGGTCACGGGGAGCAGCAGTCCCAACCGCCGGCAGCGGCGGCGCAGCAGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | GGCCCGCTCCCGAGCGCCCGGCCGCATCGCCACCTAGGTCGAGACTaGCGTTCCCGGGCTCCATGGCGGGGCGGCCTCCTGCCTCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPLPSARPHRHLGRD*RSRAPWRGGLLPRC Trigger: ACAACGAGGCAGGAGGCCGCCCCGCCATGGAGCCCGGGAACGGCAGTCTCGACCTAGGTGGCGATGCGGCCGGGCGCTCGGGAGCGGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | CTCTTGCCCGCGGCCTCCTTGCCGGCACCACGCTGCTGGGAAGGCTaGTGCTGCGCCGCCGCTGCCGGCGGTTGGGACTGCTGCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLPAASLPAPRCWEG*CCAAAAGGWDCCSP Trigger: CGGGGAGCAGCAGTCCCAACCGCCGGCAGCGGCGGCGCAGCAGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | CCGCGAAGAGCGAGGTGGGGCCGCTGCTCTTGCCCGCGGCCTCCTTaGCGGCACCACGCTGCTGGGAAGGCTGCTGCTGCGCCGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRRARWGRCSCPRPP*RHHAAGKAAAAPPL Trigger: CAGCGGCGGCGCAGCAGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | CCCCTGGCGGCGCCACCGTCACCGCGAAGAGCGAGGTGGGGCCGCTaGTCTTGCCCGCGGCCTCCTTGCCGGCACCACGCTGCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLAAPPSPRRARWGR*SCPRPPCRHHAAGK Trigger: CTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGGTGGCGCCGCCAGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | GCGGCGCCACCGTCACCGCGAAGAGCGAGGTGGGGCCGCTGCTCTTaGCCGCGGCCTCCTTGCCGGCACCACGCTGCTGGGAAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAPPSPRRARWGRCS*PRPPCRHHAAGKAA Trigger: AGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGGTGGCGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | CCCCTCCTGGAAGCCCTGGTCGTCGCCGTTCTCGTCTTCCGACGCTaGCTCCTCTTCCTCCATCGCGCCGGCGTCAGCCGCCCCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLEALVVAVLVFRR*LLFLHRAGVSRPRR Trigger: GCGGCGGGGGCGGCTGACGCCGGCGCGATGGAGGAAGAGGAGGCAGCGTCGGAAGACGAGAACGGCGACGACCAGGGCTTCCAGGAGGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | CGGCCGCATCGCCACCTAGGTCGAGACTGCCGTTCCCGGGCTCCATaGCGGGGCGGCCTCCTGCCTCGTTGTCCAGCGCGGCCTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPHRHLGRDCRSRAP*RGGLLPRCPARPGV Trigger: GACTCCAGGCCGCGCTGGACAACGAGGCAGGAGGCCGCCCCGCCATGGAGCCCGGGAACGGCAGTCTCGACCTAGGTGGCGATGCGGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | TCGCCCGCGCCCTCCTCCTCGTCGCCGAGCTCGTCTTCCCCCTCCTaGAAGCCCTGGTCGTCGCCGTTCTCGTCTTCCGACGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPAPSSSSPSSSSPS*KPWSSPFSSSDAAS Trigger: GGAGGCAGCGTCGGAAGACGAGAACGGCGACGACCAGGGCTTCCAGGAGGGGGAAGACGAGCTCGGCGACGAGGAGGAGGGCGCGGGCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | CCCTCCTCCTCGTCGCCGAGCTCGTCTTCCCCCTCCTGGAAGCCCTaGTCGTCGCCGTTCTCGTCTTCCGACGCTGCCTCCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSSSSPSSSSPSWKP*SSPFSSSDAASSSS Trigger: GGAGGAAGAGGAGGCAGCGTCGGAAGACGAGAACGGCGACGACCAGGGCTTCCAGGAGGGGGAAGACGAGCTCGGCGACGAGGAGGAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACCAGCCATCCTCCCGCCTGCTGTaGGCCCTGCCTCGCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPIIPKCHTRWYSSRYQPSSRLL*ALPRPW Trigger: CCAGGGGCGAGGCAGGGCCAACAGCAGGCGGGAGGA...TGGCTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | CATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATGTACACGTGGGGCCGCTGCTCTaGCCCGCGGCCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HLHYSFSQQHNFYTLHVHVGPLL*PAASLP Trigger: CGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCAC...GTGTACATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | CCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATAATGCGCGGCCTCCTGCCTCGTaGTCCAGCGCGGCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PKSSNSIDGFPLLRLYNARPPAS*SSAAWS Trigger: ACTCCAGGCCGCGCTGGACAACGAGGCAGGAGGCCG...CGCATTATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAGTGGGGCCGCTGCTCTaGCCCGCGGCCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HFSWFRYILNFVIKTSFPVGPLL*PAASLP Trigger: CGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCAC...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTCCTCCCGCCTGCTGTaGGCCCTGCCTCGCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYSSRLL*ALPRPW Trigger: CCAGGGGCGAGGCAGGGCCAACAGCAGGCGGGAGGA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACTCGGCCTTGAGGCCCTaGTCGGAGAGGCGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVYGKQLKNESWSVVICYSALRP*SERRRF Trigger: GAAGCGGCGCCTCTCCGACAAGGGCCTCAAGGCCGA...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCGGCCTCCTGCCTCGTaGTCCAGCGCGGCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYRPPAS*SSAAWS Trigger: ACTCCAGGCCGCGCTGGACAACGAGGCAGGAGGCCG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACGAGAGGCGCCGCTTCTaGAGCTCCTCCTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWLETSSLLIFTAAQLLYERRRF*SSSFSS Trigger: GGAGCTGAAGGAGGAGCTCAAGAAGCGGCGCCTCTC...GTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCTGGCCACCACCTCTGTaGAACTGGTTCTTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: KGRPLLAGNIFTTHFHSSWPPPL*NWFLPL Trigger: GAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCCA...GCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | CCTCTGAAATTGCCACCTCGCATATTGAATCCTCCACGGCCTCTATaGCCACCACCTCTGTTGAACTGGTTCTTGCCACTCTTATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PLKLPPRILNPPRPL*PPPLLNWFLPLLFL Trigger: TAAGAATAAGAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCCATAGAGGCCGTGGAGGATTCAATATGCGAGGTGGCAATTTCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCTTTCTGTTCTGTTTaGCCGTCTCCTCCCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLETSSLLIFTAAQLLYPPFCSV*PSPPAC Trigger: GCAGGCGGGAGGAGACGGCAAAACAGAACAGAAAGG...AGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATGAGAGGCGCCGCTTCTaGAGCTCCTCCTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYERRRF*SSSFSS Trigger: GGAGCTGAAGGAGGAGCTCAAGAAGCGGCGCCTCTC...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | GTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACTTGCCACCTCGCATATaGAATCCTCCACGGCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VIVPIIPKCHTRWYSSRYLPPRI*NPPRPL Trigger: TAGAGGCCGTGGAGGATTCAATATGCGAGGTGGCAA...GTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | TCGCTTCTTACGGGCAGCAATTTCAATAAACTTGCCAAGACACTGTaGGGCTCTCTGCAACAGTGTGTTCAGTTTTCCAGTATCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLLTGSNFNKLAKTL*GSLQQCVQFSSICH Trigger: ATGGCAGATACTGGAAAACTGAACACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAGTTTATTGAAATTGCTGCCCGTAAGAAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | GTCATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACAGCAGACTTTGCCTTTaGACACACCGTAGGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VIVPIIPKCHTRWYSSRYSRLCL*THRRKL Trigger: GAGCTTCCTACGGTGTGTCAAAAGGCAAAGTCTGCT...GTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | CGGGCAGCAATTTCAATAAACTTGCCAAGACACTGTGGGGCTCTCTaGAACAGTGTGTTCAGTTTTCCAGTATCTGCCATTTGCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RAAISINLPRHCGAL*NSVFSFPVSAICFL Trigger: TAAGAAGCAAATGGCAGATACTGGAAAACTGAACACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAGTTTATTGAAATTGCTGCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TATACCCTCCATGTACACCGCTTCTGTCATTGTCCCGATAATCCCGAAATGTCATTGCTCCAAAAGCTTTaGGGCTTCCTCTTTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YTLHVHRFCHCPDNPEMSLLQKL*GFLFLK Trigger: CTTCAGAAAGAGGAAGCCCAAAAGCTTTTGGAGCAA...TGACATTTCGGGATTATCGGGACAATGACAGAAGCGGTGTACATGGAGGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | CATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGGCTCCTCCTCTGAAATaGCCACCTCGCATATTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HERETSLGWKHLHYSFSQAPPLK*PPRILN Trigger: ATTCAATATGCGAGGTGGCAATTTCAGAGGAGGAGC...CTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | CCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACCAGCCAAAAGACACCTTCAGCTTCTaGACATTAACAGGCGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PIIPKCHTRWYSSRYQPKDTFSF*TLTGEE Trigger: TTCTTCGCCTGTTAATGTCAAGAAGCTGAAGGTGTC...TTTTGGCTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCACCTTTCTGTTCTGTTTaGCCGTCTCCTCCCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HFSWFRYILNFVIKTSFPPFCSV*PSPPAC Trigger: GCAGGCGGGAGGAGACGGCAAAACAGAACAGAAAGG...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTGGCCACCACCTCTGTaGAACTGGTTCTTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYWPPPL*NWFLPL Trigger: GAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCCA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACTTGCCACCTCGCATATaGAATCCTCCACGGCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SVYGKQLKNESWSVVICYLPPRI*NPPRPL Trigger: TAGAGGCCGTGGAGGATTCAATATGCGAGGTGGCAA...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACCTTCTGACCCCAGAATaGACCCTGCTGCCACTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SVYGKQLKNESWSVVICYLLTPE*TLLPLI Trigger: AATCAGTGGCAGCAGGGTCAATTCTGGGGTCAGAAG...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS GCA 90 bp | AATCGTATTTGTTCCAAGAATGTTGTATTTCCCAGGGTTTTCAGCTaGATGTTTAGTAACCCAGGTAGTTTTTCCAGCTCCTGGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NRICSKNVVFPRVFS*MFSNPGSFSSSWQA Trigger: GGCTTGCCAGGAGCTGGAAAAACTACCTGGGTTACTAAACATGCAGCTGAAAACCCTGGGAAATACAACATTCTTGGAACAAATACGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 90 bp | GTTTTCAGCTGCATGTTTAGTAACCCAGGTAGTTTTTCCAGCTCCTaGCAAGCCAATCATCATTACAACCTCACAATCCTTCTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFSCMFSNPGSFSSS*QANHHYNLTILLLF Trigger: GAAGAGAAGAAGGATTGTGAGGTTGTAATGATGATTGGCTTGCCAGGAGCTGGAAAAACTACCTGGGTTACTAAACATGCAGCTGAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACAGCAGACTTTGCCTTTaGACACACCGTAGGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVYGKQLKNESWSVVICYSRLCL*THRRKL Trigger: GAGCTTCCTACGGTGTGTCAAAAGGCAAAGTCTGCT...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATCAAGCAACATTCCACTaGTGGTTAGTGACCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WKHLHYSFSQQHNFYTLHQATFH*WLVTSQ Trigger: TTGGCTGGTCACTAACCACAAGTGGAATGTTGCTTG...ATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCAGCACTCTTCTGTCTCACAGTaGCATGTTTTTATTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RETSLGWKHLHYSFSQQHSSVSQ*HVFIPF Trigger: GAAAGGAATAAAAACATGCAACTGTGAGACAGAAGA...GTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAAGACACCTTCAGCTTCTaGACATTAACAGGCGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKDTFSF*TLTGEE Trigger: TTCTTCGCCTGTTAATGTCAAGAAGCTGAAGGTGTC...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATAATGCGGAGGTCTATGCAATTTCAATAAACTaGCCAAGACACTGTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SNSIDGFPLLRLYNAEVYAISIN*PRHCGA Trigger: AGCCCCACAGTGTCTTGGCAAGTTTATTGAAATTGC...ATAGACCTCCGCATTATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCTATAGTCTTCATCTTTaGGGCACACTACAACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MKGRPLLAGNIFTTHFHSYSLHL*GTLQQL Trigger: AAGCTGTTGTAGTGTGCCCAAAAGATGAAGACTATA...GCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCCCACTCTTATTCTTATaGCTTTTCTTTGAGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MKGRPLLAGNIFTTHFHSPLLFL*LFFEPV Trigger: CACTGGCTCAAAGAAAAGCAATAAGAATAAGAGTGG...GCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | CATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCTGTTGAACTGGTTCTaGCCACTCTTATTCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: HERETSLGWKHLHYSFSQLLNWF*PLLFLL Trigger: CAATAAGAATAAGAGTGGCAAGAACCAGTTCAACAG...CTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS GCA 90 bp | TTCCTCTTTCTGAAGTTCAACATAGGTTATTTCATCAAAGCATTCTaGAACCTCTGGAAGGGTGAAGTTTCCTTTCATCTTGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLFLKFNIGYFIKAF*NLWKGEVSFHLEDS Trigger: GCTGTCCTCAAGATGAAAGGAAACTTCACCCTTCCAGAGGTTGCAGAATGCTTTGATGAAATAACCTATGTTGAACTTCAGAAAGAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCAAGCAACATTCCACTaGTGGTTAGTGACCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYQATFH*WLVTSQ Trigger: TTGGCTGGTCACTAACCACAAGTGGAATGTTGCTTG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCCGATAATCCCGAAATGTCATACTAGGTGGTATAGCAGTAGGTACCAGTTTGTTCCAAGAATGTaGTATTTCCCAGGGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IVPIIPKCHTRWYSSRYQFVPRM*YFPGFS Trigger: TGAAAACCCTGGGAAATACAACATTCTTGGAACAAA...CTGGTACCTACTGCTATACCACCTAGTATGACATTTCGGGATTATCGGGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGCCAAAAAGCTCTAACTCCATCGATGGTTTCCCTTTGCTTCGATTATATAGGTGGCAGTGCCTTTTaGCTTTCTTCTTTATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSQKALTPSMVSLCFDYIGGSAF*LSSLYC Trigger: GCAATATAAAGAAGAAAGCAAAAAGGCACTGCCACC...TATATAATCGAAGCAAAGGGAAACCATCGATGGAGTTAGAGCTTTTTGGCTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGGGAGACCTCTCTTGGCTGGAAACATCTTCACTACTCATTTTCACAGCTCTTATTGCTTTTCTTaGAGCCAGTGTTTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MKGRPLLAGNIFTTHFHSSYCFS*SQCFAS Trigger: AGAAGCAAAACACTGGCTCAAAGAAAAGCAATAAGA...GCTGTGAAAATGAGTAGTGAAGATGTTTCCAGCCAAGAGAGGTCTCCCTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAACATCTTCACTACTCATTTTCACAGCAGCACAACTTCTATACCCTCCATTACAGTCTTCAGGTATaGGAAAGTATGGCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WKHLHYSFSQQHNFYTLHYSLQV*ESMAFP Trigger: AGGAAAAGCCATACTTTCCAATACCTGAAGACTGTA...ATGGAGGGTATAGAAGTTGTGCTGCTGTGAAAATGAGTAGTGAAGATGTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACGGTGGCAGTGCCTTTTaGCTTTCTTCTTTATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVYGKQLKNESWSVVICYGGSAF*LSSLYC Trigger: GCAATATAAAGAAGAAAGCAAAAAGGCACTGCCACC...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAACTGTTGAACTGGTTCTaGCCACTCTTATTCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKLLNWF*PLLFLL Trigger: CAATAAGAATAAGAGTGGCAAGAACCAGTTCAACAG...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAGCTCCTCCTCTGAAATaGCCACCTCGCATATTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HFSWFRYILNFVIKTSFPAPPLK*PPRILN Trigger: ATTCAATATGCGAGGTGGCAATTTCAGAGGAGGAGC...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTTGGCTCTGCTGTACTaGTTTTCTTCGATGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYLALLY*FSSMYS Trigger: TGAGTACATCGAAGAAAACAAGTACAGCAGAGCCAA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTCACTTCACACAGTGAGGCTCCTTTACAAGATTTAAGTGTTCTGTGCAAATCTTCTGTCTCACAGTaGCATGTTTTTATTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLTSHSEAPLQDLSVLCKSSVSQ*HVFIPF Trigger: GAAAGGAATAAAAACATGCAACTGTGAGACAGAAGA...TTTGCACAGAACACTTAAATCTTGTAAAGGAGCCTCACTGTGTGAAGTGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTATGGAAAACAGCTTAAGAATGAAAGCTGGAGTGTAGTTATCTGCTACTACAGTCTTCAGGTATaGGAAAGTATGGCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVYGKQLKNESWSVVICYYSLQV*ESMAFP Trigger: AGGAAAAGCCATACTTTCCAATACCTGAAGACTGTA...GTAGCAGATAACTACACTCCAGCTTTCATTCTTAAGCTGTTTTCCATAGACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCAGCAATTTCAATAAACTaGCCAAGACACTGTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HFSWFRYILNFVIKTSFPAISIN*PRHCGA Trigger: AGCCCCACAGTGTCTTGGCAAGTTTATTGAAATTGC...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCATTGCTCCAAAAGCTTTaGGGCTTCCTCTTTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HFSWFRYILNFVIKTSFPLLQKL*GFLFLK Trigger: CTTCAGAAAGAGGAAGCCCAAAAGCTTTTGGAGCAA...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TTAATTCCTTCCAGCTTTATCATCCATTCTGCAGTTATATCTTACCATGAAAGGTTGGCTCTGCTGTACTaGTTTTCTTCGATGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LIPSSFIIHSAVISYHERLALLY*FSSMYS Trigger: TGAGTACATCGAAGAAAACAAGTACAGCAGAGCCAA...CCTTTCATGGTAAGATATAACTGCAGAATGGATGATAAAGCTGGAAGGAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161769.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTATAGTCTTCATCTTTaGGGCACACTACAACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYYSLHL*GTLQQL Trigger: AAGCTGTTGTAGTGTGCCCAAAAGATGAAGACTATA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATCCACTCTTATTCTTATaGCTTTTCTTTGAGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYPLLFL*LFFEPV Trigger: CACTGGCTCAAAGAAAAGCAATAAGAATAAGAGTGG...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCTATCATGGAGACACAACATGCTTTGCCACTCAAATTTAAAGCATATTCTTATTGCTTTTCTTaGAGCCAGTGTTTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CFSIMETQHALPLKFKAYSYCFS*SQCFAS Trigger: AGAAGCAAAACACTGGCTCAAAGAAAAGCAATAAGA...ATATGCTTTAAATTTGAGTGGCAAAGCATGTTGTGTCTCCATGATAGAGAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS-3UTR CAA 90 bp | CACTTCTCTTGGTTCAGGTATATACTAAATTTTGTCATAAAGACCTCTTTCCCATTTGTTCCAAGAATGTaGTATTTCCCAGGGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFSWFRYILNFVIKTSFPFVPRM*YFPGFS Trigger: TGAAAACCCTGGGAAATACAACATTCTTGGAACAAA...TGGGAAAGAGGTCTTTATGACAAAATTTAGTATATACCTGAACCAAGAGAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037748.9 |
||
| CDS CCA 72 bp | CCCCTGGCGGCGCCACCGTCACCGCGAAGAGCGAGGTaGGGCCGCTGCTCTTGCCCGCGGCCTCCTTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PLAAPPSPRRAR*GRCSCPRPPCR Trigger: CCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGGTGGCGCCGCCAGGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 90 bp | GGCGGCGCCACCGTCACCGCGAAGAGCGAGGTGGGGCCGCTGCTCTaGCCCGCGGCCTCCTTGCCGGCACCACGCTGCTGGGAAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGATVTAKSEVGPLL*PAASLPAPRCWEGC Trigger: GCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGGTGGCGCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS TCA 72 bp | GCCGCCGCTGCCGGCGGTTGGGACTGCTGCTCCCCGTaGCCGTTCTCGTCGCCCGCGCCCTCCTCCTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAGGWDCCSP*PFSSPAPSSSS Trigger: CGACGAGGAGGAGGGCGCGGGCGACGAGAACGGTCACGGGGAGCAGCAGTCCCAACCGCCGGCAGCGGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | CCGAGCGCCCGGCCGCATCGCCACCTAGGTCGAGACTaGCGTTCCCGGGCTCCATGGCGGGGCGGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSARPHRHLGRD*RSRAPWRGGLL Trigger: CAGGAGGCCGCCCCGCCATGGAGCCCGGGAACGGCAGTCTCGACCTAGGTGGCGATGCGGCCGGGCGCTCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | TCCTCCTCGTCGTCTTCGGCGCCAGCCGCGGCCTCCTaGTCTAGGCCCGCTCCCGAGCGCCCGGCCGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSAPAAAS*SRPAPERPAAS Trigger: CGATGCGGCCGGGCGCTCGGGAGCGGGCCTAGAGCAGGAGGCCGCGGCTGGCGCCGAAGACGACGAGGAGGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | GCGAGGTGGGGCCGCTGCTCTTGCCCGCGGCCTCCTTaGCGGCACCACGCTGCTGGGAAGGCTGCTGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARWGRCSCPRPP*RHHAAGKAAAA Trigger: CGCAGCAGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | CCGTCACCGCGAAGAGCGAGGTGGGGCCGCTGCTCTTaGCCGCGGCCTCCTTGCCGGCACCACGCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSPRRARWGRCS*PRPPCRHHAAG Trigger: CCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | GCGCCACCGTCACCGCGAAGAGCGAGGTGGGGCCGCTaGTCTTGCCCGCGGCCTCCTTGCCGGCACCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: APPSPRRARWGR*SCPRPPCRHHA Trigger: AGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGGTGGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 72 bp | GCCCCCGCCGCCCCGTTCTCCTCGCCCAGCTCCATCTaGTCGCCGTCCAGAGCGGCGATGCCCTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: APAAPFSSPSSI*SPSRAAMPSSS Trigger: GGAGGAGGAGGGCATCGCCGCTCTGGACGGCGACCAGATGGAGCTGGGCGAGGAGAACGGGGCGGCGGGGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 72 bp | GTCTCCTCCCGCCTGCTGTTGGCCCTGCCTCGCCCCTaGCGGCGCCACCGTCACCGCGAAGAGCGAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSRLLLALPRP*RRHRHREERGG Trigger: CCCACCTCGCTCTTCGCGGTGACGGTGGCGCCGCCAGGGGCGAGGCAGGGCCAACAGCAGGCGGGAGGAGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 90 bp | ACCGCGAAGAGCGAGGTGGGGCCGCTGCTCTTGCCCGCGGCCTCCTaGCCGGCACCACGCTGCTGGGAAGGCTGCTGCTGCGCCGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TAKSEVGPLLLPAAS*PAPRCWEGCCCAAA Trigger: AGCGGCGGCGCAGCAGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 72 bp | AGCGAGGTGGGGCCGCTGCTCTTGCCCGCGGCCTCCTaGCCGGCACCACGCTGCTGGGAAGGCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEVGPLLLPAAS*PAPRCWEGCCC Trigger: GCAGCAGCAGCCTTCCCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 72 bp | ACCGTCACCGCGAAGAGCGAGGTGGGGCCGCTGCTCTaGCCCGCGGCCTCCTTGCCGGCACCACGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVTAKSEVGPLL*PAASLPAPRCW Trigger: CCAGCAGCGTGGTGCCGGCAAGGAGGCCGCGGGCAAGAGCAGCGGCCCCACCTCGCTCTTCGCGGTGACGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | ACCACGCTGCTGGGAAGGCTGCTGCTGCGCCGCCGCTaGCGGCGGTTGGGACTGCTGCTCCCCGTGACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TTLLGRLLLRRR*RRLGLLLPVTV Trigger: AACGGTCACGGGGAGCAGCAGTCCCAACCGCCGGCAGCGGCGGCGCAGCAGCAGCCTTCCCAGCAGCGTGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | ACTGCCGTTCCCGGGCTCCATGGCGGGGCGGCCTCCTaGCTCGTTGTCCAGCGCGGCCTGGAGTCGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TAVPGLHGGAAS*LVVQRGLESIH Trigger: ATGGATCGACTCCAGGCCGCGCTGGACAACGAGGCAGGAGGCCGCCCCGCCATGGAGCCCGGGAACGGCAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | TCTGTTTTGCCGTCTCCTCCCGCCTGCTGTTGGCCCTaGCTCGCCCCTGGCGGCGCCACCGTCACCGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVLPSPPACCWP*LAPGGATVTAK Trigger: CTTCGCGGTGACGGTGGCGCCGCCAGGGGCGAGGCAGGGCCAACAGCAGGCGGGAGGAGACGGCAAAACAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 90 bp | AGACTGCCGTTCCCGGGCTCCATGGCGGGGCGGCCTCCTGCCTCGTaGTCCAGCGCGGCCTGGAGTCGATCCATGAGATCGGCCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLPFPGSMAGRPPAS*SSAAWSRSMRSALR Trigger: CCTCAAGGCCGATCTCATGGATCGACTCCAGGCCGCGCTGGACAACGAGGCAGGAGGCCGCCCCGCCATGGAGCCCGGGAACGGCAGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS GCA 72 bp | GAAGCCCTGGTCGTCGCCGTTCTCGTCTTCCGACGCTaGCTCCTCTTCCTCCATCGCGCCGGCGTCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: EALVVAVLVFRR*LLFLHRAGVSR Trigger: GCGGCTGACGCCGGCGCGATGGAGGAAGAGGAGGCAGCGTCGGAAGACGAGAACGGCGACGACCAGGGCTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 72 bp | TCGTCGCCGAGCTCGTCTTCCCCCTCCTGGAAGCCCTaGTCGTCGCCGTTCTCGTCTTCCGACGCTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSSSSPSWKP*SSPFSSSDAAS Trigger: GGAGGCAGCGTCGGAAGACGAGAACGGCGACGACCAGGGCTTCCAGGAGGGGGAAGACGAGCTCGGCGACGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 72 bp | CCCTCCTCCTCGTCGCCGAGCTCGTCTTCCCCCTCCTaGAAGCCCTGGTCGTCGCCGTTCTCGTCTTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSPSSSSPS*KPWSSPFSSSD Trigger: GTCGGAAGACGAGAACGGCGACGACCAGGGCTTCCAGGAGGGGGAAGACGAGCTCGGCGACGAGGAGGAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CCA 72 bp | TTCTGTTCTGTTTTGCCGTCTCCTCCCGCCTGCTGTTaGCCCTGCCTCGCCCCTGGCGGCGCCACCGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: FCSVLPSPPACC*PCLAPGGATVT Trigger: GGTGACGGTGGCGCCGCCAGGGGCGAGGCAGGGCCAACAGCAGGCGGGAGGAGACGGCAAAACAGAACAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 72 bp | TCCAGCGCGGCCTGGAGTCGATCCATGAGATCGGCCTaGAGGCCCTTGTCGGAGAGGCGCCGCTTCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAAWSRSMRSA*RPLSERRRFLS Trigger: GCTCAAGAAGCGGCGCCTCTCCGACAAGGGCCTCAAGGCCGATCTCATGGATCGACTCCAGGCCGCGCTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 90 bp | TCCAGCGCGGCCTGGAGTCGATCCATGAGATCGGCCTTGAGGCCCTaGTCGGAGAGGCGCCGCTTCTTGAGCTCCTCCTTCAGCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSAAWSRSMRSALRP*SERRRFLSSSFSSD Trigger: GTCGGAGCTGAAGGAGGAGCTCAAGAAGCGGCGCCTCTCCGACAAGGGCCTCAAGGCCGATCTCATGGATCGACTCCAGGCCGCGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
||
| CDS CAA 90 bp | GCCTCGTTGTCCAGCGCGGCCTGGAGTCGATCCATGAGATCGGCCTaGAGGCCCTTGTCGGAGAGGCGCCGCTTCTTGAGCTCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASLSSAAWSRSMRSA*RPLSERRRFLSSSF Trigger: GAAGGAGGAGCTCAAGAAGCGGCGCCTCTCCGACAAGGGCCTCAAGGCCGATCTCATGGATCGACTCCAGGCCGCGCTGGACAACGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 72 bp | GCCTGGAGTCGATCCATGAGATCGGCCTTGAGGCCCTaGTCGGAGAGGCGCCGCTTCTTGAGCTCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: AWSRSMRSALRP*SERRRFLSSSF Trigger: GAAGGAGGAGCTCAAGAAGCGGCGCCTCTCCGACAAGGGCCTCAAGGCCGATCTCATGGATCGACTCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 90 bp | TCCATGAGATCGGCCTTGAGGCCCTTGTCGGAGAGGCGCCGCTTCTaGAGCTCCTCCTTCAGCTCCGACACCTTCAGCTTCTTGACATTA | + |
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Preference number: 6 (lower is better) Translates to: SMRSALRPLSERRRF*SSSFSSDTFSFLTL Trigger: TAATGTCAAGAAGCTGAAGGTGTCGGAGCTGAAGGAGGAGCTCAAGAAGCGGCGCCTCTCCGACAAGGGCCTCAAGGCCGATCTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CCA 72 bp | TTGCCACCTCGCATATTGAATCCTCCACGGCCTCTATaGCCACCACCTCTGTTGAACTGGTTCTTGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: LPPRILNPPRPL*PPPLLNWFLPL Trigger: GAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCCATAGAGGCCGTGGAGGATTCAATATGCGAGGTGGCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 90 bp | TCAAAGCATTCTGCAACCTCTGGAAGGGTGAAGTTTCCTTTCATCTaGAGGACAGCATGTTCTGGTAGGTCCTTCCCCTCTACTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SKHSATSGRVKFPFI*RTACSGRSFPSTSA Trigger: GGCAGAAGTAGAGGGGAAGGACCTACCAGAACATGCTGTCCTCAAGATGAAAGGAAACTTCACCCTTCCAGAGGTTGCAGAATGCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 90 bp | CCTCGCATATTGAATCCTCCACGGCCTCTATGGCCACCACCTCTGTaGAACTGGTTCTTGCCACTCTTATTCTTATTGCTTTTCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PRILNPPRPLWPPPL*NWFLPLLFLLLFFE Trigger: CTCAAAGAAAAGCAATAAGAATAAGAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCCATAGAGGCCGTGGAGGATTCAATATGCGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CCA 72 bp | ACGGGCAGCAATTTCAATAAACTTGCCAAGACACTGTaGGGCTCTCTGCAACAGTGTGTTCAGTTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TGSNFNKLAKTL*GSLQQCVQFSS Trigger: ACTGGAAAACTGAACACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAGTTTATTGAAATTGCTGCCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CCA 72 bp | TCTTCATCTTTTGGGCACACTACAACAGCTTTCCGCTaGAAGCCTGCAAACAGGCACATTTTTCTTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSFGHTTTAFR*KPANRHIFLLW Trigger: CCAGAGAAGAAAAATGTGCCTGTTTGCAGGCTTCCAGCGGAAAGCTGTTGTAGTGTGCCCAAAAGATGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 72 bp | TTGAATCCTCCACGGCCTCTATGGCCACCACCTCTGTaGAACTGGTTCTTGCCACTCTTATTCTTATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LNPPRPLWPPPL*NWFLPLLFLLL Trigger: AAGCAATAAGAATAAGAGTGGCAAGAACCAGTTCAACAGAGGTGGTGGCCATAGAGGCCGTGGAGGATTCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CCA 72 bp | GTTCGTCTTCTTCTTCAACAGGTGGCTGAGGAGACTTaGCTCTGCTGTACTTGTTTTCTTCGATGTACTCAA | + |
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Preference number: 6 (lower is better) Translates to: VRLLLQQVAEET*LCCTCFLRCTQ Trigger: TTGAGTACATCGAAGAAAACAAGTACAGCAGAGCCAAGTCTCCTCAGCCACCTGTTGAAGAAGAAGACGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 72 bp | AAATTTCGCTTCTTACGGGCAGCAATTTCAATAAACTaGCCAAGACACTGTGGGGCTCTCTGCAACAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: KFRFLRAAISIN*PRHCGALCNSV Trigger: CACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAGTTTATTGAAATTGCTGCCCGTAAGAAGCGAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS GCA 72 bp | ATTTCAATAAACTTGCCAAGACACTGTGGGGCTCTCTaGAACAGTGTGTTCAGTTTTCCAGTATCTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: ISINLPRHCGAL*NSVFSFPVSAI Trigger: AATGGCAGATACTGGAAAACTGAACACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAGTTTATTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 90 bp | TCCAGAATAAAATTTCGCTTCTTACGGGCAGCAATTTCAATAAACTaGCCAAGACACTGTGGGGCTCTCTGCAACAGTGTGTTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SRIKFRFLRAAISIN*PRHCGALCNSVFSF Trigger: AAAACTGAACACACTGTTGCAGAGAGCCCCACAGTGTCTTGGCAAGTTTATTGAAATTGCTGCCCGTAAGAAGCGAAATTTTATTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 72 bp | CGTAAGAAAATTCTTCTTCACCAAGCAACATTCCACTaGTGGTTAGTGACCAGCCAATCCGAACTTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: RKKILLHQATFH*WLVTSQSELHV Trigger: TACATGAAGTTCGGATTGGCTGGTCACTAACCACAAGTGGAATGTTGCTTGGTGAAGAAGAATTTTCTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 90 bp | GTCAGCAAGAACTTCCTTACTGATCTTAAAGGCAACACCAAGATCTaGTCCATTCTTCGCATAAGAGAGTTCAACTTCATCAGTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VSKNFLTDLKGNTKI*SILRIREFNFISFK Trigger: TTTGAAACTGATGAAGTTGAACTCTCTTATGCGAAGAATGGACAAGATCTTGGTGTTGCCTTTAAGATCAGTAAGGAAGTTCTTGCTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CCA 72 bp | AAGAAAATTCTTCTTCACCAAGCAACATTCCACTTGTaGTTAGTGACCAGCCAATCCGAACTTCATGTATAT | + |
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Preference number: 6 (lower is better) Translates to: KKILLHQATFHL*LVTSQSELHVY Trigger: ATATACATGAAGTTCGGATTGGCTGGTCACTAACCACAAGTGGAATGTTGCTTGGTGAAGAAGAATTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 72 bp | AACTTCCTTACTGATCTTAAAGGCAACACCAAGATCTaGTCCATTCTTCGCATAAGAGAGTTCAACTTCATC | + |
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Preference number: 6 (lower is better) Translates to: NFLTDLKGNTKI*SILRIREFNFI Trigger: GATGAAGTTGAACTCTCTTATGCGAAGAATGGACAAGATCTTGGTGTTGCCTTTAAGATCAGTAAGGAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 90 bp | GATAAAAGTACAGTCTTCAGGTATTGGAAAGTATGGCTTTTCCTTTaGACCGAAATTAAATTCAACTGCACAGTTATGGCAGAGAACATG | + |
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Preference number: 6 (lower is better) Translates to: DKSTVFRYWKVWLFL*TEIKFNCTVMAENM Trigger: CATGTTCTCTGCCATAACTGTGCAGTTGAATTTAATTTCGGTCAAAAGGAAAAGCCATACTTTCCAATACCTGAAGACTGTACTTTTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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| CDS CAA 90 bp | TGGTTAGTGACCAGCCAATCCGAACTTCATGTATATCAATATCTTTaGTATATAAGTGTCTTACTGGAATCTTCTCTGTTACCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: WLVTSQSELHVYQYL*YISVLLESSLLPSS Trigger: AGATGAAGGTAACAGAGAAGATTCCAGTAAGACACTTATATACAAAAGATATTGATATACATGAAGTTCGGATTGGCTGGTCACTAACCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037748.9 ENSMUST00000161769.8 |
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