Pregenerated sensors for HNRNPM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059208Ensembl transcript IDs: ENSMUST00000087582.13, ENSMUST00000114385.9, ENSMUST00000139302.8, ENSMUST00000148178.8, ENSMUST00000148258.2, ENSMUST00000234297.2, ENSMUST00000234474.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGACGACTGCATCCTGGTCATCAAAGAAGCTTTCCAGAAAGGTTaGCTCGTGTTAAGAATCCACAACCAGACTTTCACCCCATACTGT | + |
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Preference number: 1 (lower is better) Translates to: GDDCILVIKEAFQKG*LVLRIHNQTFTPYC Trigger: ACAGTATGGGGTGAAAGTCTGGTTGTGGATTCTTAACACGAGGCAACCTTTCTGGAAAGCTTCTTTGATGACCAGGATGCAGTCGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR CCA 90 bp | ACTCTACAGCTTATCCCAAAGAATCAAGGAACACACCAAGAACATTaGAATGTGAGCCATTTCTGCATGAGGAAACAAGAAACAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: TLQLIPKNQGTHQEH*NVSHFCMRKQETGV Trigger: GACACCTGTTTCTTGTTTCCTCATGCAGAAATGGCTCACATTCCAATGTTCTTGGTGTGTTCCTTGATTCTTTGGGATAAGCTGTAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR CAA 90 bp | AGGGGACGACTGCATCCTGGTCATCAAAGAAGCTTTCCAGAAAGGTaGCCTCGTGTTAAGAATCCACAACCAGACTTTCACCCCATACTG | + |
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Preference number: 2 (lower is better) Translates to: RGRLHPGHQRSFPER*PRVKNPQPDFHPIL Trigger: CAGTATGGGGTGAAAGTCTGGTTGTGGATTCTTAACACGAGGCAACCTTTCTGGAAAGCTTCTTTGATGACCAGGATGCAGTCGTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR CAA 90 bp | GACTCTACAGCTTATCCCAAAGAATCAAGGAACACACCAAGAACATaGGAATGTGAGCCATTTCTGCATGAGGAAACAAGAAACAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: DSTAYPKESRNTPRT*ECEPFLHEETRNRC Trigger: ACACCTGTTTCTTGTTTCCTCATGCAGAAATGGCTCACATTCCAATGTTCTTGGTGTGTTCCTTGATTCTTTGGGATAAGCTGTAGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGATATACCTGAACATATAACTCATGTTCAAGGGCAGGAGAGAAATGTAACCACACACCAAGAACATTaGAATGTGAGCCATTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: EDIPEHITHVQGQERNVTTHQEH*NVSHFC Trigger: GCAGAAATGGCTCACATTCCAATGTTCTTGGTGTGT...GGTTACATTTCTCTCCTGCCCTTGAACATGAGTTATATGTTCAGGTATATCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR TCA 72 bp | GTCTTGATCCAGCAGCCACCCACATCTTGGTTTAGCTaGGAAGGTGCAATGCAAGCAGGGGACGACTGCATC | + |
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Preference number: 3 (lower is better) Translates to: VLIQQPPTSWFS*EGAMQAGDDCI Trigger: GATGCAGTCGTCCCCTGCTTGCATTGCACCTTCTCAGCTAAACCAAGATGTGGGTGGCTGCTGGATCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR GCA 72 bp | TGCATCCTGGTCATCAAAGAAGCTTTCCAGAAAGGTTaGCTCGTGTTAAGAATCCACAACCAGACTTTCACC | + |
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Preference number: 3 (lower is better) Translates to: CILVIKEAFQKG*LVLRIHNQTFT Trigger: GGTGAAAGTCTGGTTGTGGATTCTTAACACGAGGCAACCTTTCTGGAAAGCTTCTTTGATGACCAGGATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR TCA 72 bp | TTTTACAAGTCTGTGACCGTAGGAATACTGCTTTGCTaGCTCTTATGTAAAAAGATGACAACACTGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: FYKSVTVGILLC*LLCKKMTTLPP Trigger: AGGAGGCAGTGTTGTCATCTTTTTACATAAGAGTCAGCAAAGCAGTATTCCTACGGTCACAGACTTGTAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| 3UTR CCA 72 bp | CTTATCCCAAAGAATCAAGGAACACACCAAGAACATTaGAATGTGAGCCATTTCTGCATGAGGAAACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LIPKNQGTHQEH*NVSHFCMRKQE Trigger: TTCTTGTTTCCTCATGCAGAAATGGCTCACATTCCAATGTTCTTGGTGTGTTCCTTGATTCTTTGGGATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCTAAGCCTGCGCCCATaGGCTCCATGCCAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEELSLRP*APCQHR Trigger: GCGGTGCTGGCATGGAGCGCATGGGCGCAGGCTTAG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCAATGGGTGCGGCCATaGGCTCCAGGCCGAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEQWVRP*APGRSP Trigger: TGGGCTTCGGCCTGGAGCGCATGGCCGCACCCATTG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACAATGGGTGCGGCCATaGGCTCCAGGCCGAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRQWVRP*APGRSP Trigger: TGGGCTTCGGCCTGGAGCGCATGGCCGCACCCATTG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCCAGGCTGGCCCCCATaGCTGTGGGCACCATCCGAT | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEPGWPP*LWAPSD Trigger: ATCGGATGGTGCCCACAGGCATGGGGGCCAGCCTGG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACCATCACAGGACCCATaGGCTCCAGGCTGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRPSQDP*APGWPP Trigger: TGGGGGCCAGCCTGGAGCGCATGGGTCCTGTGATGG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACCATGCGCTCCAGGCTaGCCCCCATGCCTGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASPCAPG*PPCLWA Trigger: TGCCCACAGGCATGGGGGCCAGCCTGGAGCGCATGG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAACCAGCGCCCAATGCTaGGCCCATGGCAGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRTSAQC*AHGRAH Trigger: ATGGGCCCTGCCATGGGCCCAGCATTGGGCGCTGGT...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGACCAGCGCCCAATGCTaGGCCCATGGCAGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEETSAQC*AHGRAH Trigger: ATGGGCCCTGCCATGGGCCCAGCATTGGGCGCTGGT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGGGCCTAGTGGGCCCATaGGCTCAATGCTGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEGLVGP*AQCWSP Trigger: TGGGCTCCAGCATTGAGCGCATGGGCCCACTAGGCC...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACCATCACAGGACCCATaGGCTCCAGGCTGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASPSQDP*APGWPP Trigger: TGGGGGCCAGCCTGGAGCGCATGGGTCCTGTGATGG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGAATACCAGCGCCCAATaGTGGGCCCATGGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEENTSAQ*WAHGRA Trigger: GGCCCTGCCATGGGCCCAGCATTGGGCGCTGGTATT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTGCGCTCCAGGCCGGTaGCCATCCGATCCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEECAPGR*PSDPSQ Trigger: CTGTGATGGATCGGATGGCCACCGGCCTGGAGCGCA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCTCCGGCTCCACCCATaGCCAGGCCCATTCGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEELRLHP*PGPFAQ Trigger: TTGAGCGAATGGGCCTGGCCATGGGTGGAGCCGGAG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAGGCCTAGTGGGCCCATaGGCTCAATGCTGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASGLVGP*AQCWSP Trigger: TGGGCTCCAGCATTGAGCGCATGGGCCCACTAGGCC...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAAATACCAGCGCCCAATaGTGGGCCCATGGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASNTSAQ*WAHGRA Trigger: GGCCCTGCCATGGGCCCAGCATTGGGCGCTGGTATT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCATGCGCTCCAGGCCGGTaGCCATCCGATCCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASCAPGR*PSDPSQ Trigger: CTGTGATGGATCGGATGGCCACCGGCCTGGAGCGCA...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCCAATGCTGGGCCCATaGCAGGGCCCATACGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEPMLGP*QGPYVP Trigger: TGGAACGTATGGGCCCTGCCATGGGCCCAGCATTGG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTCTGGCAGGCCTTCCTaGCTACTCCAGGTGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEESGRPS*LLQVHG Trigger: GCCATGCACCTGGAGTAGCCAGGAAGGCCTGCCAGA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACAATGCTGGAGCCCATaGGCTCAACTGAGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRQCWSP*AQLSPC Trigger: GCATGGGCTCAGTTGAGCGCATGGGCTCCAGCATTG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACCATGGTCTGGCCCATaGGCTCAATACTGGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRPWSGP*AQYWRP Trigger: TGGCCTCCAGTATTGAGCGCATGGGCCAGACCATGG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACAATGGCAGGACCCATaGGCTCTACACCAGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRQWQDP*ALHQSP Trigger: TGGGCTCTGGTGTAGAGCGCATGGGTCCTGCCATTG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCATCTGGCAGGCCTTCCTaGCTACTCCAGGTGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASSGRPS*LLQVHG Trigger: GCCATGCACCTGGAGTAGCCAGGAAGGCCTGCCAGA...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACAATGCTGGAGCCCATaGGCTCAACTGAGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASQCWSP*AQLSPC Trigger: GCATGGGCTCAGTTGAGCGCATGGGCTCCAGCATTG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACAATGGCAGGACCCATaGGCTCTACACCAGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASQWQDP*ALHQSP Trigger: TGGGCTCTGGTGTAGAGCGCATGGGTCCTGCCATTG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAACTCGATCCATGCCATaGCCTAAGCCTGCGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASTRSMP*PKPAPM Trigger: CATGGGCGCAGGCTTAGGCCATGGCATGGATCGAGT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAATACTGGAGGCCATGTaGTCAAGGCCTAGTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASILEAM*SRPSGP Trigger: GGGCCCACTAGGCCTTGACCACATGGCCTCCAGTAT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAAGCCCATGCGCTCAATaGTTTGGCCCACACGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRSPCAQ*FGPHGQ Trigger: TTGACCGTGTGGGCCAAACCATTGAGCGCATGGGCT...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGAGCCCATGCGCTCAATaGTTTGGCCCACACGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEESPCAQ*FGPHGQ Trigger: TTGACCGTGTGGGCCAAACCATTGAGCGCATGGGCT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR TCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTTGGCATCAATAGGCTaGCCTCCAGGTCCTAATCCC | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEELASIG*PPGPNP Trigger: GGGATTAGGACCTGGAGGTCAGCCTATTGATGCCAA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR TCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGATTGGCATCAATAGGCTaGCCTCCAGGTCCTAATCCC | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRLASIG*PPGPNP Trigger: GGGATTAGGACCTGGAGGTCAGCCTATTGATGCCAA...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCACCATCCGATCCATaGTTAGGCCCATGCGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRAPSDP*LGPCVQ Trigger: TTGAACGCATGGGCCTAAGCATGGATCGGATGGTGC...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGAGCTTCCTCCAAAGTTaGCCCGCTCCATCTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEESFLQS*PAPSQW Trigger: CCATTGAGATGGAGCGGGGCAACTTTGGAGGAAGCT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAAGCTTCCTCCAAAGTTaGCCCGCTCCATCTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRSFLQS*PAPSQW Trigger: CCATTGAGATGGAGCGGGGCAACTTTGGAGGAAGCT...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAGCACCATCCGATCCATaGTTAGGCCCATGCGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASAPSDP*LGPCVQ Trigger: TTGAACGCATGGGCCTAAGCATGGATCGGATGGTGC...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTCCGCCAAAGGAACCTaGGAAGCTTCCTCCAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEESAKGT*EASSKV Trigger: AACTTTGGAGGAAGCTTCGCAGGTTCCTTTGGCGGA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGATCCGCCAAAGGAACCTaGGAAGCTTCCTCCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRSAKGT*EASSKV Trigger: AACTTTGGAGGAAGCTTCGCAGGTTCCTTTGGCGGA...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTCTCTTCCTCCATTTTaGGTTCTGTCGCCGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEESLPPF*VLSPPL Trigger: AAGTGGCGGCGACAGAACCCAAAATGGAGGAAGAGA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGATCTCTTCCTCCATTTTaGGTTCTGTCGCCGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRSLPPF*VLSPPL Trigger: AAGTGGCGGCGACAGAACCCAAAATGGAGGAAGAGA...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR TCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCTCCCTGTTTTGCAATaGTCTCTCCTCTCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEELPVLQ*SLLSSV Trigger: CACTGAAGAGAGGAGAGATCATTGCAAAACAGGGAG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGGGTTTCCCATTCCAATaGCTTTGCTCAGATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEGFPFQ*LCSDGW Trigger: CCAACCATCTGAGCAAAGGCATTGGAATGGGAAACC...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGGTTTCCCATTCCAATaGCTTTGCTCAGATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRGFPFQ*LCSDGW Trigger: CCAACCATCTGAGCAAAGGCATTGGAATGGGAAACC...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAAGTTGGGTTGGAATATaGCTCAAAGCGATTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRSWVGI*LKAIAS Trigger: GGAGGCAATCGCTTTGAGCCATATTCCAACCCAACT...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR CCA 90 bp | TACTGTGTGCTCAGACCTACAACTGCTAAGCATGAGTTCCCGAGGAACCAAACCTCTGGCAGGCCTTCCTaGCTACTCCAGGTGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YCVLRPTTAKHEFPRNQTSGRPS*LLQVHG Trigger: GCCATGCACCTGGAGTAGCCAGGAAGGCCTGCCAGA...GGTTTGGTTCCTCGGGAACTCATGCTTAGCAGTTGTAGGTCTGAGCACACAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGGATATTAATCATTCCTaGGCCACCTGGTCCCATACC | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEDINHS*ATWSHT Trigger: GGTATGGGACCAGGTGGCCCAGGAATGATTAATATC...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114385.9 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGAGTCTTCCAGCCTTTTaGATTGCTCTCCTTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEESLPAF*IALLAC Trigger: ACATGCAAGGAGAGCAATGCAAAAGGCTGGAAGACT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139302.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAAGTTGGGTTGGAATATaGCTCAAAGCGATTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASSWVGI*LKAIAS Trigger: GGAGGCAATCGCTTTGAGCCATATTCCAACCCAACT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCATCATCCATCTTGACGTaGATCGGTCTATCAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASSSILT*IGLSNS Trigger: GCTGTTTGATAGACCGATGCACGTCAAGATGGATGA...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTTATTCCAAATCCTATaGCTTCCATTCCCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEELFQIL*LPFPSL Trigger: CAGGGATGGGAATGGAAGGCATAGGATTTGGAATAA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGATTATTCCAAATCCTATaGCTTCCATTCCCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRLFQIL*LPFPSL Trigger: CAGGGATGGGAATGGAAGGCATAGGATTTGGAATAA...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACATCACCTTTTGCATTaGTCTCCTTGCATGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASHHLLH*SPCMFT Trigger: GGTGAACATGCAAGGAGAGCAATGCAAAAGGTGATG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114385.9 |
||
| CDS-3UTR TCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGAACCAGGTCTTTAAGTaGCTGCCATTTCACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEENQVFK*LPFHIK Trigger: TTTGATGTGAAATGGCAGTCACTTAAAGACCTGGTT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR TCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGGATCACCACATTCATTaGACTTGTCCTTTAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEDHHIH*TCPLAS Trigger: AGATGCTAAAGGACAAGTTCAATGAATGTGGTGATC...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGATCACCACATTCATTaGACTTGTCCTTTAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRDHHIH*TCPLAS Trigger: AGATGCTAAAGGACAAGTTCAATGAATGTGGTGATC...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGGTTCAAAAGTCACAATaGCTATTCCACGACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEVQKSQ*LFHDFS Trigger: GGAAAAGTCGTGGAATAGGCATTGTGACTTTTGAAC...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGCAGGGGACGACTGCATCCTGGTCATCAAAGAAGCTTTCCAGAAAGGTTGTCCGCCAAAGGAACCTaGGAAGCTTCCTCCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASRGRLHPGHQRSFPERLSAKGT*EASSKV Trigger: AACTTTGGAGGAAGCTTCGCAGGTTCCTTTGGCGGA...CAACCTTTCTGGAAAGCTTCTTTGATGACCAGGATGCAGTCGTCCCCTGCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAAACCAGGTCTTTAAGTaGCTGCCATTTCACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASNQVFK*LPFHIK Trigger: TTTGATGTGAAATGGCAGTCACTTAAAGACCTGGTT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAATGGCTCAAAGCGATTaGCTCCTCTTTTTATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRMAQSD*LLFLCF Trigger: AAAACATAAAAAGAGGAGGCAATCGCTTTGAGCCAT...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGATGGCTCAAAGCGATTaGCTCCTCTTTTTATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEMAQSD*LLFLCF Trigger: AAAACATAAAAAGAGGAGGCAATCGCTTTGAGCCAT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGAGGTCTTTAAGTGACTaGCATTTCACATCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEERSLSD*HFTSKG Trigger: ACCTTTTGATGTGAAATGGCAGTCACTTAAAGACCT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAGTTCAAAAGTCACAATaGCTATTCCACGACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASVQKSQ*LFHDFS Trigger: GGAAAAGTCGTGGAATAGGCATTGTGACTTTTGAAC...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGAACATAGATATTGCTTaGACAGCTTCAATGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEENIDIA*TASMDC Trigger: ACAGTCCATTGAAGCTGTGCAAGCAATATCTATGTT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAAACATAGATATTGCTTaGACAGCTTCAATGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRNIDIA*TASMDC Trigger: ACAGTCCATTGAAGCTGTGCAAGCAATATCTATGTT...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACAAAGGGTCCTTCCATaGCTCCAATTTTATTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLDVGVQHVAWHREGRRQRVLP*LQFYLF Trigger: GAATAAATAAAATTGGAGGCATGGAAGGACCCTTTG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCAAAGGGTCCTTCCATaGCTCCAATTTTATTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SILMSAYSTWPGTGREEEQRVLP*LQFYLF Trigger: GAATAAATAAAATTGGAGGCATGGAAGGACCCTTTG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAAGGTCTTTAAGTGACTaGCATTTCACATCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGREEETTRIRQTQSSASRSLSD*HFTSKG Trigger: ACCTTTTGATGTGAAATGGCAGTCACTTAAAGACCT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR TCA 90 bp | TACTGTGTGCTCAGACCTACAACTGCTAAGCATGAGTTCCCGAGGAACCAAACCACTGCAAGGATGAAATaGGCACACAGCATGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: YCVLRPTTAKHEFPRNQTTARMK*AHSMTH Trigger: ATGTGTCATGCTGTGTGCTCATTTCATCCTTGCAGT...GGTTTGGTTCCTCGGGAACTCATGCTTAGCAGTTGTAGGTCTGAGCACACAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGAATCAAGGAACACACCAAGAACATTGGAATGTGAGCCATTTCTGCATTCGCTCTGGAGCCCATaGACAGTGGTGGGTAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PKESRNTPRTLECEPFLHSLWSP*TVVGKT Trigger: AGTCTTACCCACCACTGTCCATGGGCTCCAGAGCGA...ATGCAGAAATGGCTCACATTCCAATGTTCTTGGTGTGTTCCTTGATTCTTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGAATCAAGGAACACACCAAGAACATTGGAATGTGAGCCATTTCTGCATCTGCAGGTAGAACAATaGCAAGGCCCATGGTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKESRNTPRTLECEPFLHLQVEQ*QGPWSL Trigger: GAGCGACCATGGGCCTTGCCATTGTTCTACCTGCAG...ATGCAGAAATGGCTCACATTCCAATGTTCTTGGTGTGTTCCTTGATTCTTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| 3UTR CAA 72 bp | CTGCATCCTGGTCATCAAAGAAGCTTTCCAGAAAGGTaGCCTCGTGTTAAGAATCCACAACCAGACTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHPGHQRSFPER*PRVKNPQPDFH Trigger: GTGAAAGTCTGGTTGTGGATTCTTAACACGAGGCAACCTTTCTGGAAAGCTTCTTTGATGACCAGGATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| CDS-3UTR CCA 90 bp | AATCAAGGAACACACCAAGAACATTGGAATGTGAGCCATTTCTGCATGAGGAAAGCCCATGGACAGTGGTaGGTAAGACTAGGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NQGTHQEHWNVSHFCMRKAHGQW*VRLGKK Trigger: CTTCTTTCCTAGTCTTACCCACCACTGTCCATGGGC...TTTCCTCATGCAGAAATGGCTCACATTCCAATGTTCTTGGTGTGTTCCTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| 3UTR CAA 72 bp | AGAAGTGGGGAGAGTGACACATTCCATTCCCAGTTTTaGGAATATCTAGTTACAATATTGACTGTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSGESDTFHSQF*EYLVTILTVVK Trigger: TTTCACAACAGTCAATATTGTAACTAGATATTCCAAAAACTGGGAATGGAATGTGTCACTCTCCCCACTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| CDS CCA 90 bp | CGTTGCCGCTCGGCACGCAGGGCGCGCCGCTCTCTTCCTCCATTTTaGGTTCTGTCGCCGCCACTTCGGCTGCCGCTTCGACCCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RCRSARRARRSLPPF*VLSPPLRLPLRPLP Trigger: CGGCAGGGGTCGAAGCGGCAGCCGAAGTGGCGGCGACAGAACCCAAAATGGAGGAAGAGAGCGGCGCGCCCTGCGTGCCGAGCGGCAACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
||
| CDS GCA 90 bp | GGCTCCACCCATGGCCAGGCCCATTCGCTCAATACCAGCGCCCAATaGTGGGCCCATGGCAGGGCCCATACGTTCCAGGCTGTTGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSTHGQAHSLNTSAQ*WAHGRAHTFQAVGA Trigger: GGCGCCAACAGCCTGGAACGTATGGGCCCTGCCATGGGCCCAGCATTGGGCGCTGGTATTGAGCGAATGGGCCTGGCCATGGGTGGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
||
| CDS GCA 90 bp | CCATCCGATCCATCACAGGACCCATGCGCTCCAGGCTGGCCCCCATaGCTGTGGGCACCATCCGATCCATGCTTAGGCCCATGCGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSDPSQDPCAPGWPP*LWAPSDPCLGPCVQ Trigger: TTGAACGCATGGGCCTAAGCATGGATCGGATGGTGCCCACAGGCATGGGGGCCAGCCTGGAGCGCATGGGTCCTGTGATGGATCGGATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
||
| CDS-3UTR CAA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGATACGTTCCAGGCTGTaGGCGCCCATTCGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SILMSAYSTWPGTGREEEIRSRL*APIRSR Trigger: CCTGGAGCGAATGGGCGCCAACAGCCTGGAACGTAT...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS CCA 90 bp | TACCAGGACACCCAACAGCTGCCTGTACACCTGCAGGTAGAACAATaGCAAGGCCCATGGTCGCTCTGGAGCCCATGGACAGTGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YQDTQQLPVHLQVEQ*QGPWSLWSPWTVVG Trigger: ACCCACCACTGTCCATGGGCTCCAGAGCGACCATGGGCCTTGCCATTGTTCTACCTGCAGGTGTACAGGCAGCTGTTGGGTGTCCTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAATACGTTCCAGGCTGTaGGCGCCCATTCGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGREEETTRIRQTQSSASIRSRL*APIRSR Trigger: CCTGGAGCGAATGGGCGCCAACAGCCTGGAACGTAT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR CAA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCTCTCTTCCTCCATTTaGGGTTCTGTCGCCGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SILMSAYSTWPGTGREEELSSSI*GSVAAT Trigger: AGTGGCGGCGACAGAACCCAAAATGGAGGAAGAGAG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACTCTCTTCCTCCATTTaGGGTTCTGTCGCCGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TGREEETTRIRQTQSSASLSSSI*GSVAAT Trigger: AGTGGCGGCGACAGAACCCAAAATGGAGGAAGAGAG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
||
| CDS CCA 90 bp | CTGCAGGTAGAACAATGGCAAGGCCCATGGTCGCTCTGGAGCCCATaGACAGTGGTGGGTAAGACTAGGAAAGAAGCTCCACTGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LQVEQWQGPWSLWSP*TVVGKTRKEAPLLQ Trigger: TTGGAGCAGTGGAGCTTCTTTCCTAGTCTTACCCACCACTGTCCATGGGCTCCAGAGCGACCATGGGCCTTGCCATTGTTCTACCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS-3UTR CAA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACCATCAGGATCTTCCTaGACTTTCAGTGGCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LHLDVGVQHVAWHREGRRPSGSS*TFSGLP Trigger: TGGAAGGCCACTGAAAGTCAAGGAAGATCCTGATGG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACCATCAGGATCTTCCTaGACTTTCAGTGGCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: TGREEETTRIRQTQSSASPSGSS*TFSGLP Trigger: TGGAAGGCCACTGAAAGTCAAGGAAGATCCTGATGG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CAA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTTCCAGCCTTTTGCATaGCTCTCCTTGCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SILMSAYSTWPGTGREEEFQPFA*LSLHVH Trigger: GTGAACATGCAAGGAGAGCAATGCAAAAGGCTGGAA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139302.8 |
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| CDS-3UTR CAA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGACCATCACCTTTTGCATaGCTCTCCTTGCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LHLDVGVQHVAWHREGRRPSPFA*LSLHVH Trigger: GTGAACATGCAAGGAGAGCAATGCAAAAGGTGATGG...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114385.9 |
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| CDS-3UTR CAA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGCCACTCAGACTATGCTaGTTTAGAACTTCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SILMSAYSTWPGTGREEEPLRLC*FRTSAA Trigger: AGCTGCTGAAGTTCTAAACAAGCATAGTCTGAGTGG...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS GCA 90 bp | CAAATCGGCCCATGTTTTCCATACCACCACCAAAGGGTCCTTCCATaGCTTCCATTCCCATCCCTGCAGGTCCTAGGTTTCCCATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QIGPCFPYHHQRVLP*LPFPSLQVLGFPFQ Trigger: TTGGAATGGGAAACCTAGGACCTGCAGGGATGGGAATGGAAGGCATGGAAGGACCCTTTGGTGGTGGTATGGAAAACATGGGCCGATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148258.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCACCACTCAGACTATGCTaGTTTAGAACTTCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TGREEETTRIRQTQSSASPLRLC*FRTSAA Trigger: AGCTGCTGAAGTTCTAAACAAGCATAGTCTGAGTGG...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CAA 90 bp | CTCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGATATCTTTTAGTTGGGTaGGAATATGGCTCAAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: LHLDVGVQHVAWHREGRRYLLVG*EYGSKR Trigger: TCGCTTTGAGCCATATTCCAACCCAACTAAAAGATA...TCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CAA 90 bp | TCCATCTTGATGTCGGCGTACAGCACGTGGCCTGGCACAGGGAGGGAAGAAGAGTATCTTTTAGTTGGGTaGGAATATGGCTCAAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: SILMSAYSTWPGTGREEEYLLVG*EYGSKR Trigger: TCGCTTTGAGCCATATTCCAACCCAACTAAAAGATA...CTCTTCTTCCCTCCCTGTGCCAGGCCACGTGCTGTACGCCGACATCAAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGAGGGAAGAAGAGACCACACGCATCAGGCAAACCCAGAGCTCAGCCTCAATGCTCTCCTCCATCTaGAATTCAACAACAGCACAT | + |
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Preference number: 5 (lower is better) Translates to: TGREEETTRIRQTQSSASMLSSI*NSTTAH Trigger: ATGTGCTGTTGTTGAATTCAAGATGGAGGAGAGCAT...TGAGGCTGAGCTCTGGGTTTGCCTGATGCGTGTGGTCTCTTCTTCCCTCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114385.9 ENSMUST00000139302.8 |
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| CDS-3UTR CAA 90 bp | AGGGGACGACTGCATCCTGGTCATCAAAGAAGCTTTCCAGAAAGGTTGCCTCGTCACTTACCACATTCATaGAACTTGTCCTTTAGCATC | + |
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Preference number: 5 (lower is better) Translates to: RGRLHPGHQRSFPERLPRHLPHS*NLSFSI Trigger: GATGCTAAAGGACAAGTTCAATGAATGTGGTAAGTG...ACGAGGCAACCTTTCTGGAAAGCTTCTTTGATGACCAGGATGCAGTCGTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS TCA 90 bp | CACGTATGTTACCTCACCAACTTTTTCTTTAACCAGGTCTTTAAGTaGCTGCCATTTCACATCAAAAGGTATATTTGTAATGAAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HVCYLTNFFFNQVFK*LPFHIKRYICNEGS Trigger: AGAGCCTTCATTACAAATATACCTTTTGATGTGAAATGGCAGTCACTTAAAGACCTGGTTAAAGAAAAAGTTGGTGAGGTAACATACGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 ENSMUST00000234474.2 |
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| CDS CAA 90 bp | CCGTTGCCGCTCGGCACGCAGGGCGCGCCGCTCTCTTCCTCCATTTaGGGTTCTGTCGCCGCCACTTCGGCTGCCGCTTCGACCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PLPLGTQGAPLSSSI*GSVAATSAAASTPA Trigger: GGCAGGGGTCGAAGCGGCAGCCGAAGTGGCGGCGACAGAACCCAAAATGGAGGAAGAGAGCGGCGCGCCCTGCGTGCCGAGCGGCAACGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
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| CDS GCA 72 bp | CCAGGCCGGTGGCCATCCGATCCATCACAGGACCCATaGGCTCCAGGCTGGCCCCCATGCCTGTGGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: PGRWPSDPSQDP*APGWPPCLWAP Trigger: TGGTGCCCACAGGCATGGGGGCCAGCCTGGAGCGCATGGGTCCTGTGATGGATCGGATGGCCACCGGCCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
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| CDS GCA 72 bp | CCATCACAGGACCCATGCGCTCCAGGCTGGCCCCCATaGCTGTGGGCACCATCCGATCCATGCTTAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSQDPCAPGWPP*LWAPSDPCLGP Trigger: TGGGCCTAAGCATGGATCGGATGGTGCCCACAGGCATGGGGGCCAGCCTGGAGCGCATGGGTCCTGTGATGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
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| CDS GCA 72 bp | GGCTGGCCCCCATGCCTGTGGGCACCATCCGATCCATaGTTAGGCCCATGCGTTCAATGGCAGGACCCATGC | + |
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Preference number: 6 (lower is better) Translates to: GWPPCLWAPSDP*LGPCVQWQDPC Trigger: GCATGGGTCCTGCCATTGAACGCATGGGCCTAAGCATGGATCGGATGGTGCCCACAGGCATGGGGGCCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
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| CDS CCA 72 bp | GGCCAGGCCCATTCGCTCAATACCAGCGCCCAATGCTaGGCCCATGGCAGGGCCCATACGTTCCAGGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GQAHSLNTSAQC*AHGRAHTFQAV Trigger: AACAGCCTGGAACGTATGGGCCCTGCCATGGGCCCAGCATTGGGCGCTGGTATTGAGCGAATGGGCCTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 |
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| CDS CCA 72 bp | GGCAAGGCCCATGGTCGCTCTGGAGCCCATGGACAGTaGTGGGTAAGACTAGGAAAGAAGCTCCACTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GKAHGRSGAHGQ*WVRLGKKLHCS Trigger: GGAGCAGTGGAGCTTCTTTCCTAGTCTTACCCACCACTGTCCATGGGCTCCAGAGCGACCATGGGCCTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS CCA 72 bp | CCTGTACACCTGCAGGTAGAACAATGGCAAGGCCCATaGTCGCTCTGGAGCCCATGGACAGTGGTGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: PVHLQVEQWQGP*SLWSPWTVVGK Trigger: CTTACCCACCACTGTCCATGGGCTCCAGAGCGACCATGGGCCTTGCCATTGTTCTACCTGCAGGTGTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS CCA 72 bp | ACCCAACAGCTGCCTGTACACCTGCAGGTAGAACAATaGCAAGGCCCATGGTCGCTCTGGAGCCCATGGACA | + |
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Preference number: 6 (lower is better) Translates to: TQQLPVHLQVEQ*QGPWSLWSPWT Trigger: TGTCCATGGGCTCCAGAGCGACCATGGGCCTTGCCATTGTTCTACCTGCAGGTGTACAGGCAGCTGTTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS CCA 72 bp | GAACAATGGCAAGGCCCATGGTCGCTCTGGAGCCCATaGACAGTGGTGGGTAAGACTAGGAAAGAAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EQWQGPWSLWSP*TVVGKTRKEAP Trigger: TGGAGCTTCTTTCCTAGTCTTACCCACCACTGTCCATGGGCTCCAGAGCGACCATGGGCCTTGCCATTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS GCA 72 bp | GGACAGTGGTGGGTAAGACTAGGAAAGAAGCTCCACTaGTCCAACTCAGCAGCATCACCAAGCCACGACACA | + |
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Preference number: 6 (lower is better) Translates to: GQWWVRLGKKLH*SNSAASPSHDT Trigger: TGTGTCGTGGCTTGGTGATGCTGCTGAGTTGGAGCAGTGGAGCTTCTTTCCTAGTCTTACCCACCACTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234297.2 |
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| CDS GCA 72 bp | CCATGTTTTCCATACCACCACCAAAGGGTCCTTCCATaGCTTCCATTCCCATCCCTGCAGGTCCTAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PCFPYHHQRVLP*LPFPSLQVLGF Trigger: GAAACCTAGGACCTGCAGGGATGGGAATGGAAGGCATGGAAGGACCCTTTGGTGGTGGTATGGAAAACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148258.2 |
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| CDS CCA 72 bp | AATGAAGGCTCTGTATCTTTTAGTTGGGTTGGAATATaGCTCAAAGCGATTGCCTCCTCTTTTTATGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: NEGSVSFSWVGI*LKAIASSFYVF Trigger: AAAAACATAAAAAGAGGAGGCAATCGCTTTGAGCCATATTCCAACCCAACTAAAAGATACAGAGCCTTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000087582.13 ENSMUST00000114385.9 ENSMUST00000139302.8 ENSMUST00000148178.8 ENSMUST00000234474.2 |
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