Pregenerated sensors for HNRNPLL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024095Ensembl transcript IDs: ENSMUST00000061331.14, ENSMUST00000184297.8, ENSMUST00000184635.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTTCTGTGACACACAGCGGAACATTGTAATAATGCAGCACACATaGCGGTGGCTGGATTATATTCTTAGATGCTTGTCCAGCACTTGT | + |
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Preference number: 1 (lower is better) Translates to: LFCDTQRNIVIMQHT*RWLDYILRCLSSTC Trigger: ACAAGTGCTGGACAAGCATCTAAGAATATAATCCAGCCACCGTCATGTGTGCTGCATTATTACAATGTTCCGCTGTGTGTCACAGAAGAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR GCA 90 bp | GGTGACAGCTCTTTCCACAGCGTACTCGTCACCCATTTCTACGAGTaGTGTGCCAGGAATGGTCTTCATAAACTTTACCTTTTCAATATT | + |
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Preference number: 1 (lower is better) Translates to: GDSSFHSVLVTHFYE*CARNGLHKLYLFNI Trigger: AATATTGAAAAGGTAAAGTTTATGAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGAAAGAGCTGTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR TCA 90 bp | TACAAGCAGAACAGGTTGAAGACTCTTGAACAATTCATTTTGAGCTaGTGTAATCCACTAACCATTACAACGGAGCCAGACGGACTGCCT | + |
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Preference number: 1 (lower is better) Translates to: YKQNRLKTLEQFILS*CNPLTITTEPDGLP Trigger: AGGCAGTCCGTCTGGCTCCGTTGTAATGGTTAGTGGATTACATCAGCTCAAAATGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCGTACCCATTTCTACGAGTaGTGTGCCAGGAATGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: FCTSTPIAQTEFSRKLSRTHFYE*CARNGL Trigger: AAGACCATTCCTGGCACAGCACTCGTAGAAATGGGT...ACGCGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR TCA 90 bp | TCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGGTCTTCACAAGCAGAACAGGTTaGAGACTCTTGAACAATTCA | + |
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Preference number: 2 (lower is better) Translates to: STAYSSPISTSAVPGMVFTSRTG*RLLNNS Trigger: TGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTGT...GAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCGTCTGGGAACAACTGAGTaGTGTTTAGACACACAAACA | + |
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Preference number: 2 (lower is better) Translates to: FCTSTPIAQTEFSRKLSRLGTTE*CLDTQT Trigger: TGTTTGTGTGTCTAAACAGCACTCAGTTGTTCCCAG...ACGCGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCGTCAGGTTGAAGACTCTTaGACAATTCATTTTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FCTSTPIAQTEFSRKLSRQVEDS*TIHFEL Trigger: CAGCTCAAAATGAATTGTTCAAGAGTCTTCAACCTG...ACGCGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGCAAAGCTTCAACGTATAGGGGTTGGATCCATTCGGGACTCGTATCTGAAAATGGCTTGTCTCTaGCGACCCTTTCCTCTATCT | + |
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Preference number: 2 (lower is better) Translates to: RKAKLQRIGVGSIRDSYLKMACL*RPFPLS Trigger: AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTT...CAGATACGAGTCCCGAATGGATCCAACCCCTATACGTTGAAGCTTTGCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGTTGACATTATTAAGGTaGGTGACAGCTCTTTCCACA | + |
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Preference number: 2 (lower is better) Translates to: QFCTSTPIAQTEFSRKLSLTLLR*VTALST Trigger: TGTGGAAAGAGCTGTCACCCACCTTAATAATGTCAA...CGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCGTACACATGACGGTGGCTaGATTATATTCTTAGATGCT | + |
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Preference number: 2 (lower is better) Translates to: FCTSTPIAQTEFSRKLSRTHDGG*IIFLDA Trigger: AGCATCTAAGAATATAATCCAGCCACCGTCATGTGT...ACGCGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGACCCTTTCCTCTATCTaGATCATACTATTAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QFCTSTPIAQTEFSRKLSTLSSI*IILLAS Trigger: TGAAGCTAATAGTATGATTCAGATAGAGGAAAGGGT...CGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAACACTTTATATTTGATGAACGGAAGAACTTCGTGGTCGTTACACAACTTTCGGAGCCAGACGGACTaGCTCCATGCATGTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SNTLYLMNGRTSWSLHNFRSQTD*LHACKR Trigger: CCTCTTACATGCATGGAGGCAGTCCGTCTGGCTCCG...AAAGTTGTGTAACGACCACGAAGTTCTTCCGTTCATCAAATATAAAGTGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR CAA 90 bp | CCAGACAGAGTTTTCGCGGAAGCTTTCGCGTCAAACACTTTATATTaGATGAACGGAAGAACTTCGTGGTCGTTACACAACTTTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PDRVFAEAFASNTLY*MNGRTSWSLHNFVK Trigger: CTTCACAAAGTTGTGTAACGACCACGAAGTTCTTCCGTTCATCAAATATAAAGTGTTTGACGCGAAAGCTTCCGCGAAAACTCTGTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAACACTTTATATTTGATGAACGGAAGAACTTCGTGGTCGTTACACAACTTTGATGGTCTCCCAAAATaGCTTGTCTCTGGCGACCCT | + |
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Preference number: 2 (lower is better) Translates to: SNTLYLMNGRTSWSLHNFDGLPK*LVSGDP Trigger: AGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATC...AAAGTTGTGTAACGACCACGAAGTTCTTCCGTTCATCAAATATAAAGTGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CAA 90 bp | CAACGGAGCCAGACGGACTGCCTCCATGCATGTAAGAGGAAGACGCTTGTGGTAGTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QRSQTDCLHACKRKTLVVVSQNG*SLATLS Trigger: GGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAC...TACCACAAGCGTCTTCCTCTTACATGCATGGAGGCAGTCCGTCTGGCTCCGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CAA 90 bp | TCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGGTCTTCTACAAGCAGAACAGGTaGAAGACTCTTGAACAATTC | + |
|
Preference number: 3 (lower is better) Translates to: STAYSSPISTSAVPGMVFYKQNR*KTLEQF Trigger: GAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTGTA...GAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR GCA 72 bp | TCTTTCCACAGCGTACTCGTCACCCATTTCTACGAGTaGTGTGCCAGGAATGGTCTTCATAAACTTTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: SFHSVLVTHFYE*CARNGLHKLYL Trigger: AAGGTAAAGTTTATGAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR TCA 72 bp | GACACACAGCGGAACATTGTAATAATGCAGCACACATaGCGGTGGCTGGATTATATTCTTAGATGCTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DTQRNIVIMQHT*RWLDYILRCLS Trigger: GGACAAGCATCTAAGAATATAATCCAGCCACCGTCATGTGTGCTGCATTATTACAATGTTCCGCTGTGTGTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAAAGCAAAGCTTCAACGTATAGGGGTTGGATCCATTCGGGACTCGTATCTGCTTTTCCCAAAGAGTTaGACATTATTAAGGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: RKAKLQRIGVGSIRDSYLLFPKS*TLLRWV Trigger: CACCCACCTTAATAATGTCAAACTCTTTGGGAAAAG...CAGATACGAGTCCCGAATGGATCCAACCCCTATACGTTGAAGCTTTGCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR TCA 72 bp | AACAGGTTGAAGACTCTTGAACAATTCATTTTGAGCTaGTGTAATCCACTAACCATTACAACGGAGCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: NRLKTLEQFILS*CNPLTITTEPD Trigger: GTCTGGCTCCGTTGTAATGGTTAGTGGATTACATCAGCTCAAAATGAATTGTTCAAGAGTCTTCAACCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR CCA 72 bp | TCAAACACTTTATATTTGATGAACGGAAGAACTTCGTaGTCGTTACACAACTTTGTGAAGGTCTCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SNTLYLMNGRTS*SLHNFVKVSSV Trigger: CACAGAAGAGACCTTCACAAAGTTGTGTAACGACCACGAAGTTCTTCCGTTCATCAAATATAAAGTGTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAACACTTTATATTTGATGAACGGAAGAACTTCGTGGTCGTTACACAACTTTTATATTCTTAGATGCTaGTCCAGCACTTGTAAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: SNTLYLMNGRTSWSLHNFYILRC*SSTCKA Trigger: CGCTTTACAAGTGCTGGACAAGCATCTAAGAATATA...AAAGTTGTGTAACGACCACGAAGTTCTTCCGTTCATCAAATATAAAGTGTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR CCA 90 bp | TCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGGTCTTCCGTACGTCTCCTCCTTaGGGGAGGAGGAGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: STAYSSPISTSAVPGMVFRTSPP*GRRRRR Trigger: CCTCCTCCTCCTCCTCCCCCAAGGAGGAGACGTACG...GAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR TCA 90 bp | AGCTGCTCGTACCATCCTCTAGCTCAAATATTTGACTGGGAACAACTGAGTGCTCTCCCTCCTCGGTCTTaGGGCGCTTGGCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SCSYHPLAQIFDWEQLSALPPRS*GAWPGS Trigger: AGAGCCAGGCCAAGCGCCTCAAGACCGAGGAGGGAG...AGCACTCAGTTGTTCCCAGTCAAATATTTGAGCTAGAGGATGGTACGAGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR TCA 90 bp | GCTCTTTCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGCACTTTGTTGCCCCCTaGTGGATCGTCGGTATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALSTAYSSPISTSAVPGMHFVAP*WIVGIS Trigger: GGAAATACCGACGATCCATCAGGGGGCAACAAAGTG...CATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGAAAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR CCA 90 bp | CAACGGAGCCAGACGGACTGCCTCCATGCATGTAAGAGGAAGACGCTTGTGGTATTGAAGAAAGCCTGCTaGCCAGCAATGTACACAGGC | + |
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Preference number: 4 (lower is better) Translates to: QRSQTDCLHACKRKTLVVLKKAC*PAMYTG Trigger: GCCTGTGTACATTGCTGGCCAGCAGGCTTTCTTCAA...TACCACAAGCGTCTTCCTCTTACATGCATGGAGGCAGTCCGTCTGGCTCCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR GCA 90 bp | TCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGGTCTTCATCAGCTCCATTGAGTaGTGCTTTAGCCTTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: STAYSSPISTSAVPGMVFISSIE*CFSLLG Trigger: GCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGAT...GAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR TCA 90 bp | TTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCGTCTGGGCGCAAAGGACTaGCTCAAACTCAACCATTGC | + |
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Preference number: 4 (lower is better) Translates to: FCTSTPIAQTEFSRKLSRLGAKD*LKLNHC Trigger: GCAATGGTTGAGTTTGAGTCAGTCCTTTGCGCCCAG...ACGCGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR GCA 90 bp | CAGTTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGAGCTCCATTGAGTGCTaGTTTAGCCTTCTGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QFCTSTPIAQTEFSRKLSSSIEC*FSLLGA Trigger: TGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCT...CGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR GCA 90 bp | AGAAAAGCAAAGCTTCAACGTATAGGGGTTGGATCCATTCGGGACTCGTATCTGGCAAGAGCACTTTGTTaGCCCCTGATGGATCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: RKAKLQRIGVGSIRDSYLARALC*PLMDRR Trigger: CCGACGATCCATCAGGGGGCAACAAAGTGCTCTTGC...CAGATACGAGTCCCGAATGGATCCAACCCCTATACGTTGAAGCTTTGCTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR CCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCCGTACGTCTCCTCCTTaGGGGAGGAGGAGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTRTSPP*GRRRRR Trigger: CCTCCTCCTCCTCCTCCCCCAAGGAGGAGACGTACG...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR CCA 90 bp | TTGCAAAATCTTTGTAGCTGCTCGTACCATCCTCTAGCTCAAATATTTGACTGGTTGAGGCGCTTGGCCTaGCTCTCGAACTCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LQNLCSCSYHPLAQIFDWLRRLA*LSNSRS Trigger: GGACCGGGAGTTCGAGAGCCAGGCCAAGCGCCTCAA...CCAGTCAAATATTTGAGCTAGAGGATGGTACGAGCAGCTACAAAGATTTTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR TCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATCTCCCTCCTCGGTCTTaGGGCGCTTGGCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYLPPRS*GAWPGS Trigger: AGAGCCAGGCCAAGCGCCTCAAGACCGAGGAGGGAG...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR CCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTACGTACGTCTCCTCCTTaGGGGAGGAGGAGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLRTSPP*GRRRRR Trigger: CCTCCTCCTCCTCCTCCCCCAAGGAGGAGACGTACG...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR CCA 90 bp | AGCTGCTCGTACCATCCTCTAGCTCAAATATTTGACTGGGAACAACTGAGTGCTGCTGCTTTAGCCTTCTaGGCGCAAAGGACTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: SCSYHPLAQIFDWEQLSAAALAF*AQRTDS Trigger: TGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGC...AGCACTCAGTTGTTCCCAGTCAAATATTTGAGCTAGAGGATGGTACGAGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR GCA 90 bp | GAAGAAGGATGGTCTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGTACACAGGCACATCTaGAGCAAATGTCACACATTC | + |
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Preference number: 4 (lower is better) Translates to: EEGWSPKMACLWRPFPLSVHRHI*SKCHTF Trigger: GAATGTGTGACATTTGCTGCAGATGTGCCTGTGTAC...AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATCCTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR GCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCCGGAGCCAGACGGACTaGCTCCATGCATGTAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTRSQTD*LHACKR Trigger: CCTCTTACATGCATGGAGGCAGTCCGTCTGGCTCCG...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTTTGAGGCGCTTGGCCTaGCTCTCGAACTCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETLRRLA*LSNSRS Trigger: GGACCGGGAGTTCGAGAGCCAGGCCAAGCGCCTCAA...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR GCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCGCAAGAGCACTTTGTTaGCCCCTGATGGATCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTARALC*PLMDRR Trigger: CCGACGATCCATCAGGGGGCAACAAAGTGCTCTTGC...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR CCA 90 bp | CTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGAATCATACTATTCAGAGCCCTCGAACATaGACAACAGGGGAAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: LPKWLVSGDPFLYLNHTIQSPRT*TTGETE Trigger: TTCTGTTTCCCCTGTTGTCCATGTTCGAGGGCTCTG...AATAGTATGATTCAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR CCA 90 bp | GAAGAAGGATGGTCTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTATCGTCGGTATTTCCTaGCCGAGTGATTCTTTTACT | + |
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Preference number: 4 (lower is better) Translates to: EEGWSPKMACLWRPFPLSIVGIS*PSDSFT Trigger: AGTAAAAGAATCACTCGGCCAGGAAATACCGACGAT...AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATCCTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR GCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCGGAGCCAGACGGACTaGCTCCATGCATGTAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETRSQTD*LHACKR Trigger: CCTCTTACATGCATGGAGGCAGTCCGTCTGGCTCCG...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGAGCCTGTCGTTTAAATaGCATCATCATCACATAGCA | + |
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Preference number: 4 (lower is better) Translates to: QFCTSTPIAQTEFSRKLSSLSFK*HHHHIA Trigger: TGCTATGTGATGATGATGCCATTTAAACGACAGGCT...CGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
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| CDS-3UTR CCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCGCTGCTTTAGCCTTCTaGGCGCAAAGGACTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTAALAF*AQRTDS Trigger: TGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGC...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR CCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCGATGGTCTCCCAAAATaGCTTGTCTCTGGCGACCCT | + |
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Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTDGLPK*LVSGDP Trigger: AGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATC...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
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| CDS-3UTR TCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTACACTTTGTTGCCCCCTaGTGGATCGTCGGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLHFVAP*WIVGIS Trigger: GGAAATACCGACGATCCATCAGGGGGCAACAAAGTG...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAAAATCTTTGTAGCTGCTCGTACCATCCTCTAGCTCAAATATTTGACTGGCCCAAATTTCTCCAGTaGCTCCACAAGGTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQNLCSCSYHPLAQIFDWPKFLQ*LHKVSF Trigger: GAAGCTGACCTTGTGGAGGCACTGGAGAAATTTGGG...CCAGTCAAATATTTGAGCTAGAGGATGGTACGAGCAGCTACAAAGATTTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR GCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCCCCAAATTTCTCCAGTaGCTCCACAAGGTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTPKFLQ*LHKVSF Trigger: GAAGCTGACCTTGTGGAGGCACTGGAGAAATTTGGG...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCTTTTCCAACAGGGTTaGATACAGTATACAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QFCTSTPIAQTEFSRKLSLFQQG*IQYTEH Trigger: ATGTTCTGTATACTGTATGCAACCCTGTTGGAAAAG...CGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCGTAACATCCACCGTAATTaGGTAAAGAGGATTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCTSTPIAQTEFSRKLSRNIHRN*VKRILN Trigger: ATTCAGAATCCTCTTTACCCAATTACGGTGGATGTT...ACGCGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATCTGGGCGCAAAGGACTaGCTCAAACTCAACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYLGAKD*LKLNHC Trigger: GCAATGGTTGAGTTTGAGTCAGTCCTTTGCGCCCAG...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTAGCTCCATTGAGTGCTaGTTTAGCCTTCTGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETSSIEC*FSLLGA Trigger: TGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCT...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTACCACGGCATCAGTTTTaGACTTCCACTCCAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLPRHQF*TSTPIA Trigger: GGCTATTGGAGTGGAAGTGCAAAACTGATGCCGTGG...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTGCTGCTTTAGCCTTCTaGGCGCAAAGGACTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETAALAF*AQRTDS Trigger: TGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGC...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTGATGGTCTCCCAAAATaGCTTGTCTCTGGCGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETDGLPK*LVSGDP Trigger: AGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATC...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| 3UTR CAA 72 bp | GTTTTCGCGGAAGCTTTCGCGTCAAACACTTTATATTaGATGAACGGAAGAACTTCGTGGTCGTTACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFAEAFASNTLY*MNGRTSWSLHN Trigger: GTTGTGTAACGACCACGAAGTTCTTCCGTTCATCAAATATAAAGTGTTTGACGCGAAAGCTTCCGCGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR GCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCCCAAATTTCTCCAGTaGCTCCACAAGGTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETPKFLQ*LHKVSF Trigger: GAAGCTGACCTTGTGGAGGCACTGGAGAAATTTGGG...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATATCAGCTCCATTGAGTaGTGCTTTAGCCTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYISSIE*CFSLLG Trigger: GCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGAT...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAACCCATTTCTACGAGTaGTGTGCCAGGAATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLTHFYE*CARNGL Trigger: AAGACCATTCCTGGCACAGCACTCGTAGAAATGGGT...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGCAAAGCTTCAACGTATAGGGGTTGGATCCATTCGGGACTCGTATCTGCTCAAACTCAACCATTaGTTGTATCCCATTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKAKLQRIGVGSIRDSYLLKLNH*LYPISL Trigger: AAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAG...CAGATACGAGTCCCGAATGGATCCAACCCCTATACGTTGAAGCTTTGCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATCAGAGCCCTCGAACATaGACAACAGGGGAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYQSPRT*TTGETE Trigger: TTCTGTTTCCCCTGTTGTCCATGTTCGAGGGCTCTG...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCAGAGCCCTCGAACATaGACAACAGGGGAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETQSPRT*TTGETE Trigger: TTCTGTTTCCCCTGTTGTCCATGTTCGAGGGCTCTG...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTTTGAAGAAAGCCTGCTaGCCAGCAATGTACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETLKKAC*PAMYTG Trigger: GCCTGTGTACATTGCTGGCCAGCAGGCTTTCTTCAA...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATTTGAAGAAAGCCTGCTaGCCAGCAATGTACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYLKKAC*PAMYTG Trigger: GCCTGTGTACATTGCTGGCCAGCAGGCTTTCTTCAA...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR TCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCATAATGCAGCACACATaGCGGTGGCTGGATTATATT | + |
|
Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTIMQHT*RWLDYI Trigger: AATATAATCCAGCCACCGTCATGTGTGCTGCATTAT...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATACCCATTTCTACGAGTaGTGTGCCAGGAATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYTHFYE*CARNGL Trigger: AAGACCATTCCTGGCACAGCACTCGTAGAAATGGGT...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR TCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCCAGGTTGAAGACTCTTaGACAATTCATTTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTQVEDS*TIHFEL Trigger: CAGCTCAAAATGAATTGTTCAAGAGTCTTCAACCTG...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATTTGACTGGGAACAACTaGGTGCTGTTTAGACACACA | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYLTGNN*VLFRHT Trigger: TGTGTGTCTAAACAGCACTCAGTTGTTCCCAGTCAA...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGTACACAGGCACATCTaGAGCAAATGTCACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYVHRHI*SKCHTF Trigger: GAATGTGTGACATTTGCTGCAGATGTGCCTGTGTAC...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTACTGGGAACAACTGAGTaGTGTTTAGACACACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLLGTTE*CLDTQT Trigger: TGTTTGTGTGTCTAAACAGCACTCAGTTGTTCCCAG...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTACAAAATCTTTGTAGCTaGTCGTACCATCCTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLQNLCS*SYHPLA Trigger: AGCTAGAGGATGGTACGAGCAGCTACAAAGATTTTG...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAATCGTCGGTATTTCCTaGCCGAGTGATTCTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLIVGIS*PSDSFT Trigger: AGTAAAAGAATCACTCGGCCAGGAAATACCGACGAT...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTAAAATGGCTTGTCTCTaGCGACCCTTTCCTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETKMACL*RPFPLS Trigger: AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTT...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCGCTCAAATATTTGACTaGGAACAACTGAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTAQIFD*EQLSAV Trigger: AACAGCACTCAGTTGTTCCCAGTCAAATATTTGAGC...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAACAAGCAGAACAGGTTaGAGACTCTTGAACAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLTSRTG*RLLNNS Trigger: TGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTGT...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCCTTTTCCAACAGGGTTaGATACAGTATACAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTLFQQG*IQYTEH Trigger: ATGTTCTGTATACTGTATGCAACCCTGTTGGAAAAG...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCTGGGAACAACTGAGTaGTGTTTAGACACACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETLGTTE*CLDTQT Trigger: TGTTTGTGTGTCTAAACAGCACTCAGTTGTTCCCAG...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATCAAAATCTTTGTAGCTaGTCGTACCATCCTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLHTILEGLTSSLKLIYQNLCS*SYHPLA Trigger: AGCTAGAGGATGGTACGAGCAGCTACAAAGATTTTG...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCCTCAAACTCAACCATTaGTTGTATCCCATTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTLKLNH*LYPISL Trigger: AAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAG...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAAGCCTGTCGTTTAAATaGCATCATCATCACATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLSLSFK*HHHHIA Trigger: TGCTATGTGATGATGATGCCATTTAAACGACAGGCT...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCAACATCCACCGTAATTaGGTAAAGAGGATTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTILEGLTSSLKLIYGTNIHRN*VKRILN Trigger: ATTCAGAATCCTCTTTACCCAATTACGGTGGATGTT...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATTGACATTATTAAGGTaGGTGACAGCTCTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLLTLLR*VTALST Trigger: TGTGGAAAGAGCTGTCACCCACCTTAATAATGTCAA...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAGCTCAAATATTTGACTaGGAACAACTGAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLAQIFD*EQLSAV Trigger: AACAGCACTCAGTTGTTCCCAGTCAAATATTTGAGC...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR TCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTACAAGCAGAACAGGTTaGAGACTCTTGAACAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETTSRTG*RLLNNS Trigger: TGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTGT...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTAGCCTGTCGTTTAAATaGCATCATCATCACATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETSLSFK*HHHHIA Trigger: TGCTATGTGATGATGATGCCATTTAAACGACAGGCT...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAAACATCCACCGTAATTaGGTAAAGAGGATTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PNSTHNFGRAHKFSETHLNIHRN*VKRILN Trigger: ATTCAGAATCCTCTTTACCCAATTACGGTGGATGTT...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTTTGACATTATTAAGGTaGGTGACAGCTCTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETLTLLR*VTALST Trigger: TGTGGAAAGAGCTGTCACCCACCTTAATAATGTCAA...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTACACATGACGGTGGCTaGATTATATTCTTAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETTHDGG*IIFLDA Trigger: AGCATCTAAGAATATAATCCAGCCACCGTCATGTGT...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR GCA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCTCAAATTCAACCATTaGTTGTATCCCATTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YIPNSTHNFGRAHKFSETLKFNH*LYPISL Trigger: AAGAGAAATGGGATACAAGCAATGGTTGAATTTGAG...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061331.14 |
||
| CDS GCA 90 bp | CAGAAACTTTATGATGACTTCCACCTCCCTCCGTGGACAGGGGCATaGTCCGAGGGCCACCGCCGCTGCCACCTTCGTCGCCGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKLYDDFHLPPWTGA*SEGHRRCHLRRRRS Trigger: GGAGCGGCGGCGACGAAGGTGGCAGCGGCGGTGGCCCTCGGAGCATGCCCCTGTCCACGGAGGGAGGTGGAAGTCATCATAAAGTTTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS TCA 90 bp | TCTCGCTCTCCTCGGCCGAGTAGACGATCTCTCCCTCCTCGGTCTTaGGGCGCTTGGCCTGGCTCTCGAACTCCCGGTCCTCCTCGTACG | + |
|
Preference number: 5 (lower is better) Translates to: SRSPRPSRRSLPPRS*GAWPGSRTPGPPRT Trigger: CGTACGAGGAGGACCGGGAGTTCGAGAGCCAGGCCAAGCGCCTCAAGACCGAGGAGGGAGAGATCGTCTACTCGGCCGAGGAGAGCGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS CCA 90 bp | CAACAGGGGAAACAGAAACTTTATGATGACTTCCACCTCCCTCCGTaGACAGGGGCATGCTCCGAGGGCCACCGCCGCTGCCACCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QQGKQKLYDDFHLPP*TGACSEGHRRCHLR Trigger: ACGAAGGTGGCAGCGGCGGTGGCCCTCGGAGCATGCCCCTGTCCACGGAGGGAGGTGGAAGTCATCATAAAGTTTCTGTTTCCCCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGGTCTTCTCTCCCTCCTCGGTCTaGAGGCGCTTGGCCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: STAYSSPISTSAVPGMVFSPSSV*RRLAWL Trigger: GAGCCAGGCCAAGCGCCTCAAGACCGAGGAGGGAGA...GAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGGATGGTCTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTTCGGTCTTGAGGCGCTaGGCCTGGCTCTCGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: EEGWSPKMACLWRPFPLSSVLRR*AWLSNS Trigger: GGAGTTCGAGAGCCAGGCCAAGCGCCTCAAGACCGA...AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATCCTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CAA 90 bp | CAACGGAGCCAGACGGACTGCCTCCATGCATGTAAGAGGAAGACGCTTGTGGTAGAGAGCAAGAGCACTTaGTTGCCCCCTGATGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: QRSQTDCLHACKRKTLVVESKST*LPPDGS Trigger: CGATCCATCAGGGGGCAACAAAGTGCTCTTGCTCTC...TACCACAAGCGTCTTCCTCTTACATGCATGGAGGCAGTCCGTCTGGCTCCGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGGATGGTCTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTAGCAAGAGCACTTTGTaGCCCCCTGATGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EEGWSPKMACLWRPFPLSSKSTL*PPDGSS Trigger: CGACGATCCATCAGGGGGCAACAAAGTGCTCTTGCT...AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATCCTTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CAA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCTCTCCCTCCTCGGTCTaGAGGCGCTTGGCCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHTILEGLTSSLKLIYGTSPSSV*RRLAWL Trigger: GAGCCAGGCCAAGCGCCTCAAGACCGAGGAGGGAGA...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCTCGGTCTTGAGGCGCTaGGCCTGGCTCTCGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTILEGLTSSLKLIYGTSVLRR*AWLSNS Trigger: GGAGTTCGAGAGCCAGGCCAAGCGCCTCAAGACCGA...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATTCTCCCTCCTCGGTCTaGAGGCGCTTGGCCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTLHTILEGLTSSLKLIYSPSSV*RRLAWL Trigger: GAGCCAGGCCAAGCGCCTCAAGACCGAGGAGGGAGA...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGGTCTTCTATATATCAGCTCCATaGAGTGCTGCTTTAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STAYSSPISTSAVPGMVFYISAP*SAALAF Trigger: GAAGGCTAAAGCAGCACTCAATGGAGCTGATATATA...GAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS CCA 90 bp | CATCCGGCATATATATCAGCTCCATTGAGTGCTGCTTTAGCCTTCTaGGCGCAAAGGACTGACTCAAACTCAACCATTGCTTGTATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPAYISAPLSAALAF*AQRTDSNSTIACIP Trigger: TGGGATACAAGCAATGGTTGAGTTTGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGATATATATGCCGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CAACGGAGCCAGACGGACTGCCTCCATGCATGTAAGAGGAAGACGCTTGTGGTATGTATCCCATTTCTCTaGAAGATAACAATACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QRSQTDCLHACKRKTLVVCIPFL*KITIRC Trigger: ACAGCGTATTGTTATCTTCAAGAGAAATGGGATACA...TACCACAAGCGTCTTCCTCTTACATGCATGGAGGCAGTCCGTCTGGCTCCGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAGCGTACTCGTCACCCATTTCTACGAGTGCTGTGCCAGGAATGGTCTTCACTCAAACTCAACCATaGCTTGTATCCCATTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: STAYSSPISTSAVPGMVFTQTQP*LVSHFS Trigger: AGAGAAATGGGATACAAGCAATGGTTGAGTTTGAGT...GAAGACCATTCCTGGCACAGCACTCGTAGAAATGGGTGACGAGTACGCTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS CCA 90 bp | CATCCGGCATATATATCAGCTCCATTGAGTGCTGCTTTAGCCTTCTaGGCGCAAAGGACTGACTCAAATTCAACCATTGCTTGTATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPAYISAPLSAALAF*AQRTDSNSTIACIP Trigger: TGGGATACAAGCAATGGTTGAATTTGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGATATATATGCCGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061331.14 |
||
| CDS-3UTR CAA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCAGCAAGAGCACTTTGTaGCCCCCTGATGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LHTILEGLTSSLKLIYGTSKSTL*PPDGSS Trigger: CGACGATCCATCAGGGGGCAACAAAGTGCTCTTGCT...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAAGCAAGAGCACTTTGTaGCCCCCTGATGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PNSTHNFGRAHKFSETHLSKSTL*PPDGSS Trigger: CGACGATCCATCAGGGGGCAACAAAGTGCTCTTGCT...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCACTTCCACTCCAATAGCCCAGACAGAGTTTTCGCGGAAGCTTTCGCGTACTTTTCCAACAGGGTaGCATACAGTATACAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FCTSTPIAQTEFSRKLSRTFPTG*HTVYRT Trigger: TGTTCTGTATACTGTATGCAACCCTGTTGGAAAAGT...ACGCGAAAGCTTCCGCGAAAACTCTGTCTGGGCTATTGGAGTGGAAGTGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTAGTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNSTHNFGRAHKFSETHLVSQNG*SLATLS Trigger: GGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAC...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGAGAGCAAGAGCACTTaGTTGCCCCCTGATGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: QTLHTILEGLTSSLKLIYESKST*LPPDGS Trigger: CGATCCATCAGGGGGCAACAAAGTGCTCTTGCTCTC...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCTCCACGGCATCAGTTTaGCACTTCCACTCCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHTILEGLTSSLKLIYGTSTASV*HFHSNS Trigger: GCTATTGGAGTGGAAGTGCAAAACTGATGCCGTGGA...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATCCACGGCATCAGTTTaGCACTTCCACTCCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: PNSTHNFGRAHKFSETHLSTASV*HFHSNS Trigger: GCTATTGGAGTGGAAGTGCAAAACTGATGCCGTGGA...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGCAAAGCTTCAACGTATAGGGGTTGGATCCATTCGGGACTCGTATCTGAAACTCAACCATTGCTaGTATCCCATTTCTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RKAKLQRIGVGSIRDSYLKLNHC*YPISLE Trigger: TTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTT...CAGATACGAGTCCCGAATGGATCCAACCCCTATACGTTGAAGCTTTGCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184297.8 |
||
| CDS GCA 90 bp | ATAGTTGAAGAAAGCCTGCTGGCCAGCAATGTACACAGGCACATCTaGAGCAAATGTCACACATTCTTTGGCACTATCTATATTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVEESLLASNVHRHI*SKCHTFFGTIYIFK Trigger: TTTGAAAATATAGATAGTGCCAAAGAATGTGTGACATTTGCTGCAGATGTGCCTGTGTACATTGCTGGCCAGCAGGCTTTCTTCAACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCACTTTTCCAACAGGGTaGCATACAGTATACAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LHTILEGLTSSLKLIYGTTFPTG*HTVYRT Trigger: TGTTCTGTATACTGTATGCAACCCTGTTGGAAAAGT...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGGAACCTATATTCTTAGATGCTaGTCCAGCACTTGTAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LHTILEGLTSSLKLIYGTYILRC*SSTCKA Trigger: CGCTTTACAAGTGCTGGACAAGCATCTAAGAATATA...GGTTCCATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATTATATATCAGCTCCATaGAGTGCTGCTTTAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTLHTILEGLTSSLKLIYYISAP*SAALAF Trigger: GAAGGCTAAAGCAGCACTCAATGGAGCTGATATATA...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTACTTTTCCCAAAGAGTTaGACATTATTAAGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PNSTHNFGRAHKFSETHLLFPKS*TLLRWV Trigger: CACCCACCTTAATAATGTCAAACTCTTTGGGAAAAG...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATATATTCTTAGATGCTaGTCCAGCACTTGTAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PNSTHNFGRAHKFSETHLYILRC*SSTCKA Trigger: CGCTTTACAAGTGCTGGACAAGCATCTAAGAATATA...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTACTTTTCCAACAGGGTaGCATACAGTATACAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: YIPNSTHNFGRAHKFSETTFPTG*HTVYRT Trigger: TGTTCTGTATACTGTATGCAACCCTGTTGGAAAAGT...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATGTATCCCATTTCTCTaGAAGATAACAATACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PNSTHNFGRAHKFSETHLCIPFL*KITIRC Trigger: ACAGCGTATTGTTATCTTCAAGAGAAATGGGATACA...TAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTTACAAGCAGAACAGGTaGAAGACTCTTGAACAATTC | + |
|
Preference number: 5 (lower is better) Translates to: YIPNSTHNFGRAHKFSETYKQNR*KTLEQF Trigger: GAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTGTA...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCTTTTCCCAAAGAGTTaGACATTATTAAGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YIPNSTHNFGRAHKFSETLFPKS*TLLRWV Trigger: CACCCACCTTAATAATGTCAAACTCTTTGGGAAAAG...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATACTCAAACTCAACCATaGCTTGTATCCCATTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QTLHTILEGLTSSLKLIYTQTQP*LVSHFS Trigger: AGAGAAATGGGATACAAGCAATGGTTGAGTTTGAGT...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | TATATTCCAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTTGTATCCCATTTCTCTaGAAGATAACAATACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YIPNSTHNFGRAHKFSETCIPFL*KITIRC Trigger: ACAGCGTATTGTTATCTTCAAGAGAAATGGGATACA...AGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTGGAATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCTACACACAATTTTGGAAGGGCTCACAAGTTCTCTGAAACTCATTTATAAACTCAACCATTGCTaGTATCCCATTTCTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QTLHTILEGLTSSLKLIYKLNHC*YPISLE Trigger: TTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTT...ATAAATGAGTTTCAGAGAACTTGTGAGCCCTTCCAAAATTGTGTGTAGAGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184635.8 |
||
| CDS GCA 72 bp | TATGATGACTTCCACCTCCCTCCGTGGACAGGGGCATaGTCCGAGGGCCACCGCCGCTGCCACCTTCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: YDDFHLPPWTGA*SEGHRRCHLRR Trigger: GCGACGAAGGTGGCAGCGGCGGTGGCCCTCGGAGCATGCCCCTGTCCACGGAGGGAGGTGGAAGTCATCATA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS CCA 72 bp | ACGATCTCTCCCTCCTCGGTCTTGAGGCGCTTGGCCTaGCTCTCGAACTCCCGGTCCTCCTCGTACGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TISPSSVLRRLA*LSNSRSSSYVS Trigger: GGAGACGTACGAGGAGGACCGGGAGTTCGAGAGCCAGGCCAAGCGCCTCAAGACCGAGGAGGGAGAGATCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS TCA 72 bp | ATTCTGAATAGAGAGCAAGAGCACTTTGTTGCCCCCTaGTGGATCGTCGGTATTTCCTGGCCGAGTGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILNREQEHFVAP*WIVGISWPSDS Trigger: AGAATCACTCGGCCAGGAAATACCGACGATCCATCAGGGGGCAACAAAGTGCTCTTGCTCTCTATTCAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS CAA 72 bp | ATGTCTAAACGAAGAAGGATGGTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCCTCTATCTCGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: MSKRRRMVSQNG*SLATLSSISSS Trigger: GGAAGACGAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATCCTTCTTCGTTTAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS CAA 90 bp | ATAGCCATCATGTCTAAACGAAGAAGGATGGTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCCTCTATCTCGTCTTCCCAAATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: IAIMSKRRRMVSQNG*SLATLSSISSSQIR Trigger: CCTTATTTGGGAAGACGAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGACCATCCTTCTTCGTTTAGACATGATGGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061331.14 ENSMUST00000184635.8 |
||
| CDS GCA 72 bp | GAAAGCCTGCTGGCCAGCAATGTACACAGGCACATCTaGAGCAAATGTCACACATTCTTTGGCACTATCTAT | + |
|
Preference number: 6 (lower is better) Translates to: ESLLASNVHRHI*SKCHTFFGTIY Trigger: ATAGATAGTGCCAAAGAATGTGTGACATTTGCTGCAGATGTGCCTGTGTACATTGCTGGCCAGCAGGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS CAA 72 bp | TTTAGTGTGCAACATCCGGCATATATATCAGCTCCATaGAGTGCTGCTTTAGCCTTCTGGGCGCAAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: FSVQHPAYISAP*SAALAFWAQRT Trigger: AGTCCTTTGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGATATATATGCCGGATGTTGCACACTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS CCA 72 bp | TATATATCAGCTCCATTGAGTGCTGCTTTAGCCTTCTaGGCGCAAAGGACTGACTCAAACTCAACCATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: YISAPLSAALAF*AQRTDSNSTIA Trigger: AGCAATGGTTGAGTTTGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGATATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184297.8 ENSMUST00000184635.8 |
||
| CDS CCA 72 bp | TATATATCAGCTCCATTGAGTGCTGCTTTAGCCTTCTaGGCGCAAAGGACTGACTCAAATTCAACCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: YISAPLSAALAF*AQRTDSNSTIA Trigger: AGCAATGGTTGAATTTGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGATATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061331.14 |
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| CDS CAA 90 bp | CCAGCAATGTACACAGGCACATCTGCAGCAAATGTCACACATTCTTaGGCACTATCTATATTTTCAAACTCCACGAGAGCCTGTCGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PAMYTGTSAANVTHS*ALSIFSNSTRACRL Trigger: TAAACGACAGGCTCTCGTGGAGTTTGAAAATATAGATAGTGCCAAAGAATGTGTGACATTTGCTGCAGATGTGCCTGTGTACATTGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061331.14 ENSMUST00000184297.8 ENSMUST00000184635.8 |
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| CDS CAA 90 bp | TATTCAATTTTTAGTGTGCAACATCCGGCATATATATCAGCTCCATaGAGTGCTGCTTTAGCCTTCTGGGCGCAAAGGACTGACTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: YSIFSVQHPAYISAP*SAALAFWAQRTDSN Trigger: GTTTGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGATATATATGCCGGATGTTGCACACTAAAAATTGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184297.8 ENSMUST00000184635.8 |
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| CDS CAA 90 bp | TATTCAATTTTTAGTGTGCAACATCCGGCATATATATCAGCTCCATaGAGTGCTGCTTTAGCCTTCTGGGCGCAAAGGACTGACTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: YSIFSVQHPAYISAP*SAALAFWAQRTDSN Trigger: ATTTGAGTCAGTCCTTTGCGCCCAGAAGGCTAAAGCAGCACTCAATGGAGCTGATATATATGCCGGATGTTGCACACTAAAAATTGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061331.14 |
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| CDS CAA 90 bp | CAAAGGACTGACTCAAACTCAACCATTGCTTGTATCCCATTTCTCTaGAAGATAACAATACGCTGTACTTTTCCAACAGGGTTGCATACA | + |
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Preference number: 6 (lower is better) Translates to: QRTDSNSTIACIPFL*KITIRCTFPTGLHT Trigger: TGTATGCAACCCTGTTGGAAAAGTACAGCGTATTGTTATCTTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAGTCAGTCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184297.8 ENSMUST00000184635.8 |
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| CDS CAA 72 bp | GACTCAAACTCAACCATTGCTTGTATCCCATTTCTCTaGAAGATAACAATACGCTGTACTTTTCCAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: DSNSTIACIPFL*KITIRCTFPTG Trigger: CCCTGTTGGAAAAGTACAGCGTATTGTTATCTTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184297.8 ENSMUST00000184635.8 |
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| CDS CAA 90 bp | CAAAGGACTGACTCAAATTCAACCATTGCTTGTATCCCATTTCTCTaGAAGATAACAATACGCTGTACTTTTCCAACAGGGTTGCATACA | + |
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Preference number: 6 (lower is better) Translates to: QRTDSNSTIACIPFL*KITIRCTFPTGLHT Trigger: TGTATGCAACCCTGTTGGAAAAGTACAGCGTATTGTTATCTTCAAGAGAAATGGGATACAAGCAATGGTTGAATTTGAGTCAGTCCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061331.14 |
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