Pregenerated sensors for HNRNPDL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029328Ensembl transcript IDs: ENSMUST00000086900.11, ENSMUST00000128187.8, ENSMUST00000149384.8, ENSMUST00000153442.8
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTACACCTCCACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTaGCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LHLHRTAFSGVCLAL*PQRATPRDRRGQGD Trigger: GTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGAGGTGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| 3UTR GCA 90 bp | AGACCATACCACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTaGCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RPYHRTAFSGVCLAL*PQRATPRDRRGQGD Trigger: GTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGTATGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR GCA 90 bp | AAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTGTATaGCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGT | + |
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Preference number: 1 (lower is better) Translates to: KMVSLHLHRTAFSGV*LALCPQRATPRDRR Trigger: ACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| 3UTR GCA 90 bp | CCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCTaGATAGCAAACTGCTTAAATCTATTTAGCTTGTGTACTATGGTG | + |
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Preference number: 1 (lower is better) Translates to: PKDTPCDFPQLPSSA*IANCLNLFSLCTMV Trigger: CACCATAGTACACAAGCTAAATAGATTTAAGCAGTTTGCTATGCAGGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR CCA 90 bp | ACTTCAATTAAAGATCACACGCATGTTCATCAGCAAAGTACAGTTTaGGCACTGAAACTCACTCGAGTTCCAAATGACACAGGATGGACT | + |
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Preference number: 1 (lower is better) Translates to: TSIKDHTHVHQQSTV*ALKLTRVPNDTGWT Trigger: AGTCCATCCTGTGTCATTTGGAACTCGAGTGAGTTTCAGTGCCCAAACTGTACTTTGCTGATGAACATGCGTGTGATCTTTAATTGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
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| 3UTR TCA 90 bp | TTAAAGATCACACGCATGTTCATCAGCAAAGTACAGTTTGGGCACTaGAACTCACTCGAGTTCCAAATGACACAGGATGGACTGAATTTA | + |
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Preference number: 1 (lower is better) Translates to: LKITRMFISKVQFGH*NSLEFQMTQDGLNL Trigger: TAAATTCAGTCCATCCTGTGTCATTTGGAACTCGAGTGAGTTTCAGTGCCCAAACTGTACTTTGCTGATGAACATGCGTGTGATCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGGTATGCCTTGCGCTCTaGCCGCAACGTGCGACCCCC | + |
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Preference number: 2 (lower is better) Translates to: LCPQRATPRDRRGQGDTRVCLAL*PQRATP Trigger: GGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATAC...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR-3UTR GCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAAGTATGCCTTGCGCTCTaGCCGCAACGTGCGACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQVCLAL*PQRATP Trigger: GGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATAC...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCGGCTGCAGCCCCTCTaGCTCCTTTCTGTTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LCPQRATPRDRRGQGDTRRLQPL*LLSVVA Trigger: AGCAACAACAGAAAGGAGGCAGAGGGGCTGCAGCCG...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| 3UTR-3UTR GCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATTCTGGTGTATGCCTTaGGCTCTGCCCGCAACGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQFWCMP*ALPATC Trigger: GCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAA...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR-3UTR GCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAAGCGTTTTCTGGTGTATaGCTTGCGCTCTGCCCGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQAFSGV*LALCPQ Trigger: TTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGC...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCAGGACAGCGTTTTCTaGTGTATGCCTTGCGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCPQRATPRDRRGQGDTRQDSVF*CMPCAL Trigger: CAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTG...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR-3UTR TCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATGGGTTGCGCAACTTTaGTTTCGCACTTCCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQWVAQL*FRTSQN Trigger: GTTCTGGGAAGTGCGAAATCAAAGTTGCGCAACCCA...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| 3UTR CAA 90 bp | TGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTGTATGCCTaGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: WFLYTSTGQRFLVYA*RSARNVRPPEIDVV Trigger: GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| 3UTR-3UTR CCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAACTCCTCTACACCTCCTaGTACACAAAGCAAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQLLYTS*YTKQTE Trigger: TTCTGTTTGCTTTGTGTACCAGGAGGTGTAGAGGAG...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
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| 3UTR-3UTR TCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATTCCCAGAACCTATTTaGTGGTATCTGCTTTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQFPEPI*WYLLSN Trigger: GTTAGAAAGCAGATACCATCAAATAGGTTCTGGGAA...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGAACAGAGGAACTAATTaGCAGCTATATACAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LCPQRATPRDRRGQGDTRNRGTN*QLYTVG Trigger: TCCAACTGTATATAGCTGCCAATTAGTTCCTCTGTT...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCCAAGAGCATCACTTGTaGTCAGGCAAAGGACACTTG | + |
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Preference number: 2 (lower is better) Translates to: FNAPKDTPCDFPQLPSSAQEHHL*SGKGHL Trigger: CAAGTGTCCTTTGCCTGAGCACAAGTGATGCTCTTG...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCTTTTGTGGAACCGTGGAGAGACCTCTAAGCCAAACATTTATGGAAAAGGAACTATGCAGTACCTaGCGCAGGAAAACAATCACA | + |
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Preference number: 2 (lower is better) Translates to: RSFCGTVERPLSQTFMEKELCST*RRKTIT Trigger: TGTGATTGTTTTCCTGCGTCAGGTACTGCATAGTTC...CTTTTCCATAAATGTTTGGCTTAGAGGTCTCTCCACGGTTCCACAAAAGCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGATTCACTACTGCTAATTTTCCTAAAACCTCAGCCCACTGCACTGACCTTATGTCGTCCTGTAAGATaGTTTCTTTACACCTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: MDSLLLIFLKPQPTALTLCRPVR*FLYTSC Trigger: GCAGGAGGTGTAAAGAAACCATCTTACAGGACGACA...TAAGGTCAGTGCAGTGGGCTGAGGTTTTAGGAAAATTAGCAGTAGTGAATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGTCTCCAGATACCCAGGGAGGAAACATTATTCAAAAGGTGTAGAAGTTAACACAAATCCACATTaGGTCATCATAACACAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VSVSRYPGRKHYSKGVEVNTNPH*VIITQV Trigger: TACCTGTGTTATGATGACTCAATGTGGATTTGTGTT...AACTTCTACACCTTTTGAATAATGTTTCCTCCCTGGGTATCTGGAGACTGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGTATAAAAAGCTTACACTGGTCTAAGACCAAGTACTCTAAACATGTACCCAACAGAGGAACTAATTaGCAGCTATATACAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: ISIKSLHWSKTKYSKHVPNRGTN*QLYTVG Trigger: TCCAACTGTATATAGCTGCCAATTAGTTCCTCTGTT...GGGTACATGTTTAGAGTACTTGGTCTTAGACCAGTGTAAGCTTTTTATACTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGGCCTCCTTTCTGTTGTaGCTGCTGCTGCCTGTACAC | + |
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Preference number: 3 (lower is better) Translates to: LCPQRATPRDRRGQGDTRASFLL*LLLPVH Trigger: GTGTACAGGCAGCAGCAGCAACAACAGAAAGGAGGC...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| 3UTR GCA 72 bp | CACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTaGCCGCAACGTGCGACCCCCAGAGATAGACGTGGT | + |
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Preference number: 3 (lower is better) Translates to: HRTAFSGVCLAL*PQRATPRDRRG Trigger: ACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR GCA 72 bp | TCTTTACACCTCCACAGGACAGCGTTTTCTGGTGTATaGCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SLHLHRTAFSGV*LALCPQRATPR Trigger: TCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| 3UTR GCA 72 bp | AAGAGACCATACCACAGGACAGCGTTTTCTGGTGTATaGCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: KRPYHRTAFSGV*LALCPQRATPR Trigger: TCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGTATGGTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| 3UTR-3UTR CAA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAAAAAGCTTTGGCCCTTTaGGGGTCTATCAATTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQKALAL*GSINLP Trigger: TGGCAAATTGATAGACCCCAAAAGGGCCAAAGCTTT...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| 3UTR CCA 72 bp | GATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTaGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGAC | + |
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Preference number: 3 (lower is better) Translates to: DGFFTPPQDSVF*CMPCALPATCD Trigger: GTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| 3UTR TCA 72 bp | AGCATCACTTGTGCTCAGGCAAAGGACACTTGCCAGTaGGGTACAGCCCTAGCACACCAAGGTGCTTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SITCAQAKDTCQ*GTALAHQGAFL Trigger: AAGGAAAGCACCTTGGTGTGCTAGGGCTGTACCTCACTGGCAAGTGTCCTTTGCCTGAGCACAAGTGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR TCA 72 bp | ACACGCATGTTCATCAGCAAAGTACAGTTTGGGCACTaGAACTCACTCGAGTTCCAAATGACACAGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: TRMFISKVQFGH*NSLEFQMTQDG Trigger: TCCATCCTGTGTCATTTGGAACTCGAGTGAGTTTCAGTGCCCAAACTGTACTTTGCTGATGAACATGCGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAGATGTGTGCAGCCCCACAAGTGTGCAAAGGTCCACTTTCATGGACTGCTTTACAGTTGGACACAATaGTGTCATGTACACTACAAA | + |
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Preference number: 3 (lower is better) Translates to: IRCVQPHKCAKVHFHGLLYSWTQ*CHVHYK Trigger: TTTGTAGTGTACATGACACAATTGTGTCCAACTGTA...AAGCAGTCCATGAAAGTGGACCTTTGCACACTTGTGGGGCTGCACACATCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
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| 3UTR GCA 72 bp | TTTCCACAACTCCCTTCCTCTGCCTGCATAGCAAACTaGTTAAATCTATTTAGCTTGTGTACTATGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: FPQLPSSACIAN*LNLFSLCTMVG Trigger: TCCCACCATAGTACACAAGCTAAATAGATTTAAGCAGTTTGCTATGCAGGCAGAGGAAGGGAGTTGTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR CCA 72 bp | AAAGATCACACGCATGTTCATCAGCAAAGTACAGTTTaGGCACTGAAACTCACTCGAGTTCCAAATGACACA | + |
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Preference number: 3 (lower is better) Translates to: KDHTHVHQQSTV*ALKLTRVPNDT Trigger: TGTGTCATTTGGAACTCGAGTGAGTTTCAGTGCCCAAACTGTACTTTGCTGATGAACATGCGTGTGATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
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| 3UTR-3UTR CAA 90 bp | ATCAGTATAAAAAGCTTACACTGGTCTAAGACCAAGTACTCTAAACATGTACCCTACAGTTGGACACAATaGTGTCATGTACACTACAAA | + |
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Preference number: 3 (lower is better) Translates to: ISIKSLHWSKTKYSKHVPYSWTQ*CHVHYK Trigger: TTTGTAGTGTACATGACACAATTGTGTCCAACTGTA...GGGTACATGTTTAGAGTACTTGGTCTTAGACCAGTGTAAGCTTTTTATACTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| 3UTR-3UTR CAA 90 bp | ATCAGTATAAAAAGCTTACACTGGTCTAAGACCAAGTACTCTAAACATGTACCCTTAAATCTATTTAGCTaGTGTACTATGGTGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: ISIKSLHWSKTKYSKHVPLNLFS*CTMVGW Trigger: CCATCCCACCATAGTACACAAGCTAAATAGATTTAA...GGGTACATGTTTAGAGTACTTGGTCTTAGACCAGTGTAAGCTTTTTATACTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
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| CDS-3UTR CCA 90 bp | TGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTCTGCCGGGGAGCCCGTaGCCGCCAATGGGAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLALCPQRATPRDRRGQGLPGSP*PPMGEA Trigger: GGCCTCTCCCATTGGCGGCCACGGGCTCCCCGGCAG...ACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| CDS-3UTR GCA 90 bp | GGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTGCCAATCGGGAGGGCTaGTGGGCGGTGACGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GVCLALCPQRATPRDRRGANREG*WAVTWR Trigger: GCGCCACGTCACCGCCCAGCAGCCCTCCCGATTGGC...ACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| CDS-3UTR CCA 90 bp | GTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAATGGCGGCGGCACATaGGAGAGCCGGGGCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: VYALRSARNVRPPEIDVVNGGGT*ESRGGT Trigger: GGTCCCGCCCCGGCTCTCCCATGTGCCGCCGCCATT...GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| CDS-3UTR CCA 90 bp | TATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGAATCGGGAGGGCTGCTaGGCGGTGACGTGGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: YALRSARNVRPPEIDVVRNREGC*AVTWRG Trigger: CCCGCGCCACGTCACCGCCCAGCAGCCCTCCCGATT...CCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| CDS-3UTR CCA 90 bp | TATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGACTCGGGGAAAGACTaGGGGCAGCGCGCGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: YALRSARNVRPPEIDVVRDSGKD*GQRARL Trigger: GAGCCGCGCGCGCTGCCCCCAGTCTTTCCCCGAGTC...CCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGTCCTCTTCCGCCGGCTaGAGCCCCTCTGCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LCPQRATPRDRRGQGDTRSSSAG*SPSASF Trigger: AAAGGAGGCAGAGGGGCTGCAGCCGGCGGAAGAGGA...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
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| CDS-3UTR GCA 90 bp | AGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGAGGGAGGAGCGGAGCGTaGGGTACCCGTCATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SVFWCMPCALPATCDPQRGRSGA*GTRHPA Trigger: AGCAGGATGACGGGTACCGCACGCTCCGCTCCTCCC...TCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| CDS-3UTR CCA 90 bp | GGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTAGCGGAGGGGAACAATaGCGGCGGCACATGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GVCLALCPQRATPRDRRGSGGEQ*RRHMGE Trigger: CTCTCCCATGTGCCGCCGCCATTGTTCCCCTCCGCT...ACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
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| CDS-3UTR CCA 90 bp | TGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTCATTCATGTCCTCCATaGTGGCGGAGCCGTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: CLALCPQRATPRDRRGQGHSCPP*WRSRRR Trigger: TCGCCGACGGCTCCGCCACCATGGAGGACATGAATG...ACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| CDS-3UTR CCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCATTCATGTCCTCCATaGTGGCGGAGCCGTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LCPQRATPRDRRGQGDTRHSCPP*WRSRRR Trigger: TCGCCGACGGCTCCGCCACCATGGAGGACATGAATG...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
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| CDS-3UTR GCA 90 bp | ACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCTCCTCTTCCGCCGGCTaGAGCCCCTCTGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFLVYALRSARNVRPSSSAG*SPSASF Trigger: AAAGGAGGCAGAGGGGCTGCAGCCGGCGGAAGAGGA...GGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | TATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGCGGCTGCAGCCCCTCTaGCTCCTTTCTGTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YALRSARNVRPPEIDVVRRLQPL*LLSVVA Trigger: AGCAACAACAGAAAGGAGGCAGAGGGGCTGCAGCCG...CCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAACGGCTGCAGCCCCTCTaGCTCCTTTCTGTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQRLQPL*LLSVVA Trigger: AGCAACAACAGAAAGGAGGCAGAGGGGCTGCAGCCG...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAACGGTACCCGTCATCCTaGTGGTTCTTGCTCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQRYPSS*WFLLAL Trigger: CAACGCGAGCAAGAACCAGCAGGATGACGGGTACCG...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTGGTTCTTGCTCGCGTTaGTCTTGGATCCCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVCLALCPQRATPRDRRGGSCSR*SWIPLR Trigger: TCGCAGAGGGATCCAAGATCAACGCGAGCAAGAACC...ACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCTTCCAGTTTTGGCCCTaGCCTCTTCCACGCCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFLVYALRSARNVRPFQFWP*PLPRPL Trigger: TAGGGGGCGTGGAAGAGGTCAGGGCCAAAACTGGAA...GGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTCCTTTCTGTTGTTaGTGCTGCTGCCTGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: LCPQRATPRDRRGQGDTRPPFCC*CCCLYT Trigger: GGTGTACAGGCAGCAGCAGCAACAACAGAAAGGAGG...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCGGTTCTTGCTCGCGTTaGTCTTGGATCCCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFLVYALRSARNVRPGSCSR*SWIPLR Trigger: TCGCAGAGGGATCCAAGATCAACGCGAGCAAGAACC...GGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGTGTTGTTGCTGCTGCTaGCTGTACACCTCTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCPQRATPRDRRGQGDTRCCCCC*LYTSLG Trigger: ACCCAAAGAGGTGTACAGGCAGCAGCAGCAACAACA...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATACCCGTCATCCTGCTaGTTCTTGCTCGCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQYPSSC*FLLALI Trigger: GATCAACGCGAGCAAGAACCAGCAGGATGACGGGTA...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
||
| CDS-3UTR GCA 90 bp | GTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCTGTTGTTGCTGCTGCTaGCTGTACACCTCTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VYALRSARNVRPPEIDVVCCCCC*LYTSLG Trigger: ACCCAAAGAGGTGTACAGGCAGCAGCAGCAACAACA...GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTGCCCGTGGCCGCCAATaGGAGAGGCCGCGGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGARGRQ*ERPREA Trigger: AGCCTCCCGCGGCCTCTCCCATTGGCGGCCACGGGC...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| 3UTR CAA 72 bp | TACACCTCCACAGGACAGCGTTTTCTGGTGTATGCCTaGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: YTSTGQRFLVYA*RSARNVRPPEI Trigger: TATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGAGGTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| 3UTR CAA 72 bp | GACCATACCACAGGACAGCGTTTTCTGGTGTATGCCTaGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: DHTTGQRFLVYA*RSARNVRPPEI Trigger: TATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGTGGTATGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000149384.8 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAAATTTTACCGTCATCCTaGTGGTTCTTGCTCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQILPSS*WFLLAL Trigger: CAACGCGAGCAAGAACCAGCAGGATGACGGTAAAAT...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTTACACCTCTTTGGGTTaGGCAACTTTGATTTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLALCPQRATPRDRRGQGYTSLG*ATLISH Trigger: GTGCGAAATCAAAGTTGCGCAACCCAAAGAGGTGTA...ACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGAGAGCTAGATTTAAAATaGCGGCGGAAGAGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVFWCMPCALPATCDPQRELDLK*RRKRSG Trigger: GCCGGATCTCTTCCGCCGCCATTTTAAATCTAGCTC...TCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR GCA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCGCCAATCGGGAGGGCTaGTGGGCGGTGACGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FNAPKDTPCDFPQLPSSAANREG*WAVTWR Trigger: GCGCCACGTCACCGCCCAGCAGCCCTCCCGATTGGC...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | AGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGAATTTTACCGTCATCCTaGTGGTTCTTGCTCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVFWCMPCALPATCDPQRILPSS*WFLLAL Trigger: CAACGCGAGCAAGAACCAGCAGGATGACGGTAAAAT...TCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | GTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCTACACCTCTTTGGGTTaGGCAACTTTGATTTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYALRSARNVRPPEIDVVYTSLG*ATLISH Trigger: GTGCGAAATCAAAGTTGCGCAACCCAAAGAGGTGTA...GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTTTCCCAGAACCTATTTaGTGGTATCTGCTTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLALCPQRATPRDRRGQGFPEPI*WYLLSN Trigger: GTTAGAAAGCAGATACCATCAAATAGGTTCTGGGAA...ACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCAGTCTCCAGATACCCAGGGAGGAAACATTATTCAAAAGGTGTAGAAGTTAATGGCGGCGGCACATaGGAGAGCCGGGGCGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VSVSRYPGRKHYSKGVEVNGGGT*ESRGGT Trigger: GGTCCCGCCCCGGCTCTCCCATGTGCCGCCGCCATT...AACTTCTACACCTTTTGAATAATGTTTCCTCCCTGGGTATCTGGAGACTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CCA 90 bp | GCACACCATGTGATAGGAAGTGTCACCAATCACAACAGACTAGTGTCAGTCTCCAGCGGAGGGGAACAATaGCGGCGGCACATGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHHVIGSVTNHNRLVSVSSGGEQ*RRHMGE Trigger: CTCTCCCATGTGCCGCCGCCATTGTTCCCCTCCGCT...GGAGACTGACACTAGTCTGTTGTGATTGGTGACACTTCCTATCACATGGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | GTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCTGGGGTCTATCAATTTaGCATCCAGTTTGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYALRSARNVRPPEIDVVWGLSI*HPVCVL Trigger: AAGAACACAAACTGGATGGCAAATTGATAGACCCCA...GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CCA 90 bp | CAGATACCCAGGGAGGAAACATTATTCAAAAGGTGTAGAAGTTATCAACAGAGACTGCCGGGGAGCCCGTaGCCGCCAATGGGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QIPREETLFKRCRSYQQRLPGSP*PPMGEA Trigger: GGCCTCTCCCATTGGCGGCCACGGGCTCCCCGGCAG...TCTCTGTTGATAACTTCTACACCTTTTGAATAATGTTTCCTCCCTGGGTATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CCA 90 bp | TGGACCAATACCCCCTACAAAATAAGCTGCGTCTGTCTTGATTATTGCTTCTTTAATCGGGAGGGCTGCTaGGCGGTGACGTGGCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WTNTPYKISCVCLDYCFFNREGC*AVTWRG Trigger: CCCGCGCCACGTCACCGCCCAGCAGCCCTCCCGATT...AAAGAAGCAATAATCAAGACAGACGCAGCTTATTTTGTAGGGGGTATTGGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| 3UTR CAA 72 bp | AAACAAGAGCATCACTTGTGCTCAGGCAAAGGACACTaGCCAGTGAGGTACAGCCCTAGCACACCAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQEHHLCSGKGH*PVRYSPSTPRC Trigger: GCACCTTGGTGTGCTAGGGCTGTACCTCACTGGCAAGTGTCCTTTGCCTGAGCACAAGTGATGCTCTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTTTTGTGGAACCGTGGAGAGACCTCTAAGCCAAACATTTATGGAAAAGTCCTCTTCCGCCGGCTaGAGCCCCTCTGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSFCGTVERPLSQTFMEKSSSAG*SPSASF Trigger: AAAGGAGGCAGAGGGGCTGCAGCCGGCGGAAGAGGA...CTTTTCCATAAATGTTTGGCTTAGAGGTCTCTCCACGGTTCCACAAAAGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTAATTGTTCTGGTGATTaGCGCCCCCTCGGGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGNCSGD*RPLGTP Trigger: AGGCGTCCCGAGGGGGCGGCAATCACCAGAACAATT...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR TCA 90 bp | GCACACCATGTGATAGGAAGTGTCACCAATCACAACAGACTAGTGTCAGTCTCCTGGGTTGCGCAACTTTaGTTTCGCACTTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHHVIGSVTNHNRLVSVSWVAQL*FRTSQN Trigger: GTTCTGGGAAGTGCGAAATCAAAGTTGCGCAACCCA...GGAGACTGACACTAGTCTGTTGTGATTGGTGACACTTCCTATCACATGGTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGATGTGTGCAGCCCCACAAGTGTGCAAAGGTCCACTTTCATGGACTGCTTTGGGTTGCGCAACTTTaGTTTCGCACTTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IRCVQPHKCAKVHFHGLLWVAQL*FRTSQN Trigger: GTTCTGGGAAGTGCGAAATCAAAGTTGCGCAACCCA...AAGCAGTCCATGAAAGTGGACCTTTGCACACTTGTGGGGCTGCACACATCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGTCTCCAGATACCCAGGGAGGAAACATTATTCAAAAGGTGTAGAAGTTCGGCTGCAGCCCCTCTaGCTCCTTTCTGTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSVSRYPGRKHYSKGVEVRLQPL*LLSVVA Trigger: AGCAACAACAGAAAGGAGGCAGAGGGGCTGCAGCCG...AACTTCTACACCTTTTGAATAATGTTTCCTCCCTGGGTATCTGGAGACTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CCA 90 bp | GCACACCATGTGATAGGAAGTGTCACCAATCACAACAGACTAGTGTCAGTCTCCGAGCTAGATTTAAAATaGCGGCGGAAGAGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHHVIGSVTNHNRLVSVSELDLK*RRKRSG Trigger: GCCGGATCTCTTCCGCCGCCATTTTAAATCTAGCTC...GGAGACTGACACTAGTCTGTTGTGATTGGTGACACTTCCTATCACATGGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGATGTGTGCAGCCCCACAAGTGTGCAAAGGTCCACTTTCATGGACTGCTTTTACCGTCATCCTGCTaGTTCTTGCTCGCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: IRCVQPHKCAKVHFHGLLLPSSC*FLLALI Trigger: GATCAACGCGAGCAAGAACCAGCAGGATGACGGTAA...AAGCAGTCCATGAAAGTGGACCTTTGCACACTTGTGGGGCTGCACACATCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTTGGGTTGCGCAACTTTaGTTTCGCACTTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGWVAQL*FRTSQN Trigger: GTTCTGGGAAGTGCGAAATCAAAGTTGCGCAACCCA...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR GCA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCCCTCCTTTCTGTTGTTaGTGCTGCTGCCTGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: FNAPKDTPCDFPQLPSSAPPFCC*CCCLYT Trigger: GGTGTACAGGCAGCAGCAGCAACAACAGAAAGGAGG...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTTTACCGTCATCCTGCTaGTTCTTGCTCGCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGLPSSC*FLLALI Trigger: GATCAACGCGAGCAAGAACCAGCAGGATGACGGTAA...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR TCA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTAAATCCAAATCCTCTTaGTCTTCCCGTGACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGKSKSS*SSRDWV Trigger: GACCCAGTCACGGGAAGATCAAGAGGATTTGGATTT...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR TCA 90 bp | CAGATACCCAGGGAGGAAACATTATTCAAAAGGTGTAGAAGTTATCAACAGAGATTCCAGTTTTGGCCCTaGCCTCTTCCACGCCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QIPREETLFKRCRSYQQRFQFWP*PLPRPL Trigger: TAGGGGGCGTGGAAGAGGTCAGGGCCAAAACTGGAA...TCTCTGTTGATAACTTCTACACCTTTTGAATAATGTTTCCTCCCTGGGTATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCTGTTGTTGCTGCTGCTaGCTGTACACCTCTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FNAPKDTPCDFPQLPSSACCCCC*LYTSLG Trigger: ACCCAAAGAGGTGTACAGGCAGCAGCAGCAACAACA...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTAAGTCCTCACTTCAATTAAAGATCACACGCATGTTCATCAGCAAAGTAAATTGTTCTGGTGATTaGCGCCCCCTCGGGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSSLQLKITRMFISKVNCSGD*RPLGTP Trigger: AGGCGTCCCGAGGGGGCGGCAATCACCAGAACAATT...TACTTTGCTGATGAACATGCGTGTGATCTTTAATTGAAGTGAGGACTTAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAATTACATTTCCACAGAACTATGCAGTACCTGACGCAGGAAAACAATCACCATTCATGTCCTCCATaGTGGCGGAGCCGTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IKLHFHRTMQYLTQENNHHSCPP*WRSRRR Trigger: TCGCCGACGGCTCCGCCACCATGGAGGACATGAATG...GTGATTGTTTTCCTGCGTCAGGTACTGCATAGTTCTGTGGAAATGTAATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAAGTCCTCACTTCAATTAAAGATCACACGCATGTTCATCAGCAAAGTAGGTTCTTGCTCGCGTTaGTCTTGGATCCCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLKSSLQLKITRMFISKVGSCSR*SWIPLR Trigger: TCGCAGAGGGATCCAAGATCAACGCGAGCAAGAACC...TACTTTGCTGATGAACATGCGTGTGATCTTTAATTGAAGTGAGGACTTAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGTATAAAAAGCTTACACTGGTCTAAGACCAAGTACTCTAAACATGTACCCAATTGTTCTGGTGATTaGCGCCCCCTCGGGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISIKSLHWSKTKYSKHVPNCSGD*RPLGTP Trigger: AGGCGTCCCGAGGGGGCGGCAATCACCAGAACAATT...GGGTACATGTTTAGAGTACTTGGTCTTAGACCAGTGTAAGCTTTTTATACTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAATTACATTTCCACAGAACTATGCAGTACCTGACGCAGGAAAACAATCACGGTTCTTGCTCGCGTTaGTCTTGGATCCCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IKLHFHRTMQYLTQENNHGSCSR*SWIPLR Trigger: TCGCAGAGGGATCCAAGATCAACGCGAGCAAGAACC...GTGATTGTTTTCCTGCGTCAGGTACTGCATAGTTCTGTGGAAATGTAATTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCTACACCTCTTTGGGTTaGGCAACTTTGATTTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FNAPKDTPCDFPQLPSSAYTSLG*ATLISH Trigger: GTGCGAAATCAAAGTTGCGCAACCCAAAGAGGTGTA...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTTGGGGTCTATCAATTTaGCATCCAGTTTGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGWGLSI*HPVCVL Trigger: AAGAACACAAACTGGATGGCAAATTGATAGACCCCA...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR GCA 90 bp | GCAAACTGCTTAAATCTATTTAGCTTGTGTACTATGGTGGGATGGATTCACTACATTTTACCGTCATCCTaGTGGTTCTTGCTCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ANCLNLFSLCTMVGWIHYILPSS*WFLLAL Trigger: CAACGCGAGCAAGAACCAGCAGGATGACGGTAAAAT...GTAGTGAATCCATCCCACCATAGTACACAAGCTAAATAGATTTAAGCAGTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAATTACATTTCCACAGAACTATGCAGTACCTGACGCAGGAAAACAATCACTTACCGTCATCCTGCTaGTTCTTGCTCGCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: IKLHFHRTMQYLTQENNHLPSSC*FLLALI Trigger: GATCAACGCGAGCAAGAACCAGCAGGATGACGGTAA...GTGATTGTTTTCCTGCGTCAGGTACTGCATAGTTCTGTGGAAATGTAATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTTTTGTGGAACCGTGGAGAGACCTCTAAGCCAAACATTTATGGAAAAGTTCCCAGAACCTATTTaGTGGTATCTGCTTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSFCGTVERPLSQTFMEKFPEPI*WYLLSN Trigger: GTTAGAAAGCAGATACCATCAAATAGGTTCTGGGAA...CTTTTCCATAAATGTTTGGCTTAGAGGTCTCTCCACGGTTCCACAAAAGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGTCTCCAGATACCCAGGGAGGAAACATTATTCAAAAGGTGTAGAAGTTTGGGGTCTATCAATTTaGCATCCAGTTTGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVSRYPGRKHYSKGVEVWGLSI*HPVCVL Trigger: AAGAACACAAACTGGATGGCAAATTGATAGACCCCA...AACTTCTACACCTTTTGAATAATGTTTCCTCCCTGGGTATCTGGAGACTGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS CCA 90 bp | CCGGCGGCAGCGGCGGCGGAGCGTTGTATGGAGCTAGATTTAAAATaGCGGCGGAAGAGATCCGGCCGCCGCCTGCGCCCTCCCTTTATA | + |
|
Preference number: 5 (lower is better) Translates to: PAAAAAERCMELDLK*RRKRSGRRLRPPFI Trigger: TATAAAGGGAGGGCGCAGGCGGCGGCCGGATCTCTTCCGCCGCCATTTTAAATCTAGCTCCATACAACGCTCCGCCGCCGCTGCCGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGTGGTTCTTGCTCGCGTaGATCTTGGATCCCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LCPQRATPRDRRGQGDTRWFLLA*ILDPSA Trigger: CGCAGAGGGATCCAAGATCAACGCGAGCAAGAACCA...CCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | CGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATTGCTCGCGTTGATCTaGGATCCCTCTGCGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNVRPPEIDVVRVTHGLQLLALI*DPSANS Trigger: GGAGTTCGCAGAGGGATCCAAGATCAACGCGAGCAA...TTGCAGGCCGTGTGTCACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | GTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCTGGTTCTTGCTCGCGTaGATCTTGGATCCCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VYALRSARNVRPPEIDVVWFLLA*ILDPSA Trigger: CGCAGAGGGATCCAAGATCAACGCGAGCAAGAACCA...GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCGCCTCCTTTCTGTTGTaGCTGCTGCTGCCTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: TGQRFLVYALRSARNVRPASFLL*LLLPVH Trigger: GTGTACAGGCAGCAGCAGCAACAACAGAAAGGAGGC...GGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | GTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCTCTGCCTCCTTTCTGTaGTTGCTGCTGCTGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VYALRSARNVRPPEIDVVSASFL*LLLLPV Trigger: TACAGGCAGCAGCAGCAACAACAGAAAGGAGGCAGA...GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATCATCCTGCTGGTTCTaGCTCGCGTTGATCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVFWCMPCALPATCDPQRSSCWF*LALILD Trigger: ATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGA...TCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000149384.8 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | GTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCTGCCTGTACACCTCTTaGGGTTGCGCAACTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VYALRSARNVRPPEIDVVCLYTS*GCATLI Trigger: AATCAAAGTTGCGCAACCCAAAGAGGTGTACAGGCA...GACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | TATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGTCAGTCAGATCTTTCTaGCTTGTATCCCAGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YALRSARNVRPPEIDVVRSVRSF*LVSQLK Trigger: CTTGAGCTGGGATACAAGCAAGAAAGATCTGACTGA...CCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGGTTTGGGGTCTATCAATTaGCCATCCAGTTTGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLALCPQRATPRDRRGQGLGSIN*PSSLCS Trigger: AGAACACAAACTGGATGGCAAATTGATAGACCCCAA...ACCCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | TATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATAGACGTGGTCAGGAAAGCTTTGGCCCTTTaGGGGTCTATCAATTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YALRSARNVRPPEIDVVRKALAL*GSINLP Trigger: TGGCAAATTGATAGACCCCAAAAGGGCCAAAGCTTT...CCTGACCACGTCTATCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCCCAGAGATTGGGTTGCGCAACTTaGATTTCGCACTTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVFWCMPCALPATCDPQRLGCAT*ISHFPE Trigger: TTCTGGGAAGTGCGAAATCAAAGTTGCGCAACCCAA...TCTCTGGGGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCGTACACCTCTTTGGGTaGCGCAACTTTGATTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGQRFLVYALRSARNVRPVHLFG*RNFDFA Trigger: TGCGAAATCAAAGTTGCGCAACCCAAAGAGGTGTAC...GGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGACAGCGTTTTCTGGTGTATGCCTTGCGCTCTGCCCGCAACGTGCGACCCTCAGTCAGATCTTTCTaGCTTGTATCCCAGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGQRFLVYALRSARNVRPSVRSF*LVSQLK Trigger: CTTGAGCTGGGATACAAGCAAGAAAGATCTGACTGA...GGGTCGCACGTTGCGGGCAGAGCGCAAGGCATACACCAGAAAACGCTGTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAAACGAAACACCCATTAGATGTGTGCAGCCCCACAAGTGTGCAAAGGTCTGGTTCTTGCTCGCGTaGATCTTGGATCCCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NKNETPIRCVQPHKCAKVWFLLA*ILDPSA Trigger: CGCAGAGGGATCCAAGATCAACGCGAGCAAGAACCA...GACCTTTGCACACTTGTGGGGCTGCACACATCTAATGGGTGTTTCGTTTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTAGCGGCGGCGGAGCGTaGTATGGAGCTAGATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGSGGGA*YGARFK Trigger: TTTAAATCTAGCTCCATACAACGCTCCGCCGCCGCT...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR CAA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCTTGCTCGCGTTGATCTaGGATCCCTCTGCGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: FNAPKDTPCDFPQLPSSALLALI*DPSANS Trigger: GGAGTTCGCAGAGGGATCCAAGATCAACGCGAGCAA...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCTGGTTCTTGCTCGCGTaGATCTTGGATCCCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FNAPKDTPCDFPQLPSSAWFLLA*ILDPSA Trigger: CGCAGAGGGATCCAAGATCAACGCGAGCAAGAACCA...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCGCCTCCTTTCTGTTGTaGCTGCTGCTGCCTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: FNAPKDTPCDFPQLPSSAASFLL*LLLPVH Trigger: GTGTACAGGCAGCAGCAGCAACAACAGAAAGGAGGC...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTTCTGCCTCCTTTCTGTaGTTGCTGCTGCTGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGSASFL*LLLLPV Trigger: TACAGGCAGCAGCAGCAACAACAGAAAGGAGGCAGA...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR CAA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTTCATCCTGCTGGTTCTaGCTCGCGTTGATCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGSSCWF*LALILD Trigger: ATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGA...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR CAA 90 bp | ATTAGATGTGTGCAGCCCCACAAGTGTGCAAAGGTCCACTTTCATGGACTGCTTTTGGGTTGCGCAACTTaGATTTCGCACTTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IRCVQPHKCAKVHFHGLLLGCAT*ISHFPE Trigger: TTCTGGGAAGTGCGAAATCAAAGTTGCGCAACCCAA...AAGCAGTCCATGAAAGTGGACCTTTGCACACTTGTGGGGCTGCACACATCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCAGTCTCCAGATACCCAGGGAGGAAACATTATTCAAAAGGTGTAGAAGTTAGCGGCGGCGGAGCGTaGTATGGAGCTAGATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSVSRYPGRKHYSKGVEVSGGGA*YGARFK Trigger: TTTAAATCTAGCTCCATACAACGCTCCGCCGCCGCT...AACTTCTACACCTTTTGAATAATGTTTCCTCCCTGGGTATCTGGAGACTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | CCATCCAGTTTGTGTTCTTTCAGTTCCAAAACCTTATCCACACTAGCAGCATCTAGCGGCGGCGGAGCGTaGTATGGAGCTAGATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSSLCSFSSKTLSTLAASSGGGA*YGARFK Trigger: TTTAAATCTAGCTCCATACAACGCTCCGCCGCCGCT...AGATGCTGCTAGTGTGGATAAGGTTTTGGAACTGAAAGAACACAAACTGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATGCACCAAAAGATACACCATGTGACTTTCCACAACTCCCTTCCTCTGCCTCATCCTGCTGGTTCTaGCTCGCGTTGATCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FNAPKDTPCDFPQLPSSASSCWF*LALILD Trigger: ATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGA...GGCAGAGGAAGGGAGTTGTGGAAAGTCACATGGTGTATCTTTTGGTGCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | GCACACCATGTGATAGGAAGTGTCACCAATCACAACAGACTAGTGTCAGTCTCCAAAGCTTTGGCCCTTTaGGGGTCTATCAATTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHHVIGSVTNHNRLVSVSKALAL*GSINLP Trigger: TGGCAAATTGATAGACCCCAAAAGGGCCAAAGCTTT...GGAGACTGACACTAGTCTGTTGTGATTGGTGACACTTCCTATCACATGGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCGTCCTGTAAGATGGTTTCTTTACACCTCCACAGGACAGCGTTTTCTGGTGTACACCTCTTTGGGTaGCGCAACTTTGATTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKMVSLHLHRTAFSGVHLFG*RNFDFA Trigger: TGCGAAATCAAAGTTGCGCAACCCAAAGAGGTGTAC...ACCAGAAAACGCTGTCCTGTGGAGGTGTAAAGAAACCATCTTACAGGACGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086900.11 |
||
| CDS-3UTR CAA 90 bp | CCATCCAGTTTGTGTTCTTTCAGTTCCAAAACCTTATCCACACTAGCAGCATCTTCATCCTGCTGGTTCTaGCTCGCGTTGATCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSSLCSFSSKTLSTLAASSSCWF*LALILD Trigger: ATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGA...AGATGCTGCTAGTGTGGATAAGGTTTTGGAACTGAAAGAACACAAACTGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
||
| CDS-3UTR CAA 90 bp | ATGGATTCACTACTGCTAATTTTCCTAAAACCTCAGCCCACTGCACTGACCTTATCAGTCAGATCTTTCTaGCTTGTATCCCAGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MDSLLLIFLKPQPTALTLSVRSF*LVSQLK Trigger: CTTGAGCTGGGATACAAGCAAGAAAGATCTGACTGA...TAAGGTCAGTGCAGTGGGCTGAGGTTTTAGGAAAATTAGCAGTAGTGAATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | CATCAGCAAAGTACAGTTTGGGCACTGAAACTCACTCGAGTTCCAAATGACACATTGGGGTCTATCAATTaGCCATCCAGTTTGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HQQSTVWALKLTRVPNDTLGSIN*PSSLCS Trigger: AGAACACAAACTGGATGGCAAATTGATAGACCCCAA...TGTGTCATTTGGAACTCGAGTGAGTTTCAGTGCCCAAACTGTACTTTGCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAATTACATTTCCACAGAACTATGCAGTACCTGACGCAGGAAAACAATCACTCTGCCTCCTTTCTGTaGTTGCTGCTGCTGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IKLHFHRTMQYLTQENNHSASFL*LLLLPV Trigger: TACAGGCAGCAGCAGCAACAACAGAAAGGAGGCAGA...GTGATTGTTTTCCTGCGTCAGGTACTGCATAGTTCTGTGGAAATGTAATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACTGCTTAAATCTATTTAGCTTGTGTACTATGGTGGGATGGATTCACTACTGCCTGTACACCTCTTaGGGTTGCGCAACTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ANCLNLFSLCTMVGWIHYCLYTS*GCATLI Trigger: AATCAAAGTTGCGCAACCCAAAGAGGTGTACAGGCA...GTAGTGAATCCATCCCACCATAGTACACAAGCTAAATAGATTTAAGCAGTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTAAGTCCTCACTTCAATTAAAGATCACACGCATGTTCATCAGCAAAGTATGCCTGTACACCTCTTaGGGTTGCGCAACTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLKSSLQLKITRMFISKVCLYTS*GCATLI Trigger: AATCAAAGTTGCGCAACCCAAAGAGGTGTACAGGCA...TACTTTGCTGATGAACATGCGTGTGATCTTTAATTGAAGTGAGGACTTAAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTAAGTCCTCACTTCAATTAAAGATCACACGCATGTTCATCAGCAAAGTAAAAGCTTTGGCCCTTTaGGGGTCTATCAATTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLKSSLQLKITRMFISKVKALAL*GSINLP Trigger: TGGCAAATTGATAGACCCCAAAAGGGCCAAAGCTTT...TACTTTGCTGATGAACATGCGTGTGATCTTTAATTGAAGTGAGGACTTAAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153442.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGTATAAAAAGCTTACACTGGTCTAAGACCAAGTACTCTAAACATGTACCCTTGGGTTGCGCAACTTaGATTTCGCACTTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISIKSLHWSKTKYSKHVPLGCAT*ISHFPE Trigger: TTCTGGGAAGTGCGAAATCAAAGTTGCGCAACCCAA...GGGTACATGTTTAGAGTACTTGGTCTTAGACCAGTGTAAGCTTTTTATACTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGTATAAAAAGCTTACACTGGTCTAAGACCAAGTACTCTAAACATGTACCCGTACACCTCTTTGGGTaGCGCAACTTTGATTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISIKSLHWSKTKYSKHVPVHLFG*RNFDFA Trigger: TGCGAAATCAAAGTTGCGCAACCCAAAGAGGTGTAC...GGGTACATGTTTAGAGTACTTGGTCTTAGACCAGTGTAAGCTTTTTATACTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAATTACATTTCCACAGAACTATGCAGTACCTGACGCAGGAAAACAATCACTTGGGGTCTATCAATTaGCCATCCAGTTTGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IKLHFHRTMQYLTQENNHLGSIN*PSSLCS Trigger: AGAACACAAACTGGATGGCAAATTGATAGACCCCAA...GTGATTGTTTTCCTGCGTCAGGTACTGCATAGTTCTGTGGAAATGTAATTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128187.8 |
||
| CDS GCA 72 bp | GCGCTGGAAGCGAGCGAAGGGAGGAGCGGGGCGAGCTaGCGGGGAGCCCGTGGCCGCCAATGGGAGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ALEASEGRSGAS*RGARGRQWERP Trigger: CGGCCTCTCCCATTGGCGGCCACGGGCTCCCCGGCAGCTCGCCCCGCTCCTCCCTTCGCTCGCTTCCAGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000128187.8 |
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| CDS CCA 72 bp | AGCGGGGCGAGCTGCCGGGGAGCCCGTGGCCGCCAATaGGAGAGGCCGCGGGAGGCTAAAGTAGCGGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: SGASCRGARGRQ*ERPREAKVAGA Trigger: CGCTCCCGCTACTTTAGCCTCCCGCGGCCTCTCCCATTGGCGGCCACGGGCTCCCCGGCAGCTCGCCCCGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000128187.8 |
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| CDS CAA 90 bp | GTGCTGGCGCGCAGTCCGGGTCCCGGCGGCAGCGGCGGCGGAGCGTaGTATGGAGCTAGATTTAAAATGGCGGCGGAAGAGATCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: VLARSPGPGGSGGGA*YGARFKMAAEEIRP Trigger: CGGCCGGATCTCTTCCGCCGCCATTTTAAATCTAGCTCCATACAACGCTCCGCCGCCGCTGCCGCCGGGACCCGGACTGCGCGCCAGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000128187.8 |
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| CDS CCA 72 bp | GCGGCGGCGGAGCGTTGTATGGAGCTAGATTTAAAATaGCGGCGGAAGAGATCCGGCCGCCGCCTGCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: AAAERCMELDLK*RRKRSGRRLRP Trigger: AGGGCGCAGGCGGCGGCCGGATCTCTTCCGCCGCCATTTTAAATCTAGCTCCATACAACGCTCCGCCGCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000128187.8 |
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| CDS CAA 72 bp | CGCAGTCCGGGTCCCGGCGGCAGCGGCGGCGGAGCGTaGTATGGAGCTAGATTTAAAATGGCGGCGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSPGPGGSGGGA*YGARFKMAAEE Trigger: CTCTTCCGCCGCCATTTTAAATCTAGCTCCATACAACGCTCCGCCGCCGCTGCCGCCGGGACCCGGACTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086900.11 ENSMUST00000128187.8 |
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| CDS CCA 72 bp | GGGGAGGAGCGGAGCGTGCGGTACCCGTCATCCTGCTaGTTCTTGCTCGCGTTGATCTTGGATCCCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: GEERSVRYPSSC*FLLALILDPSA Trigger: CGCAGAGGGATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGACGGGTACCGCACGCTCCGCTCCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| CDS GCA 72 bp | GGAGGGGAGGAGCGGAGCGTGCGGTACCCGTCATCCTaGTGGTTCTTGCTCGCGTTGATCTTGGATCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGEERSVRYPSS*WFLLALILDPS Trigger: AGAGGGATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGACGGGTACCGCACGCTCCGCTCCTCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| CDS CAA 72 bp | GAGCGGAGCGTGCGGTACCCGTCATCCTGCTGGTTCTaGCTCGCGTTGATCTTGGATCCCTCTGCGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: ERSVRYPSSCWF*LALILDPSANS Trigger: GGAGTTCGCAGAGGGATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGACGGGTACCGCACGCTCCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149384.8 |
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| CDS CAA 72 bp | CCTCCAATAAACATTTTACCGTCATCCTGCTGGTTCTaGCTCGCGTTGATCTTGGATCCCTCTGCGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: PPINILPSSCWF*LALILDPSANS Trigger: GGAGTTCGCAGAGGGATCCAAGATCAACGCGAGCAAGAACCAGCAGGATGACGGTAAAATGTTTATTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086900.11 ENSMUST00000128187.8 ENSMUST00000153442.8 |
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