Pregenerated sensors for HNRNPA2B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004980Ensembl transcript IDs: ENSMUST00000069949.13, ENSMUST00000090002.10, ENSMUST00000114459.8, ENSMUST00000203220.3, ENSMUST00000203253.2, ENSMUST00000203954.3, ENSMUST00000204158.3, ENSMUST00000204188.3
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAATCCATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTaGCATACCACTGCATATTTATGCATGACTGAGATAAGAGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: QSIHKMAVCICSGVF*HTTAYLCMTEIRVS Trigger: GGAAACTCTTATCTCAGTCATGCATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATGGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| 3UTR TCA 90 bp | AGCAAGAAAAGCTTTATTAATGATCACTTGGCTTGCCTCAGCTGTTaGAATGAAGCACTTTACAGTCTTTGTGGCAGCAGAATATACTTG | + |
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Preference number: 1 (lower is better) Translates to: SKKSFINDHLACLSC*NEALYSLCGSRIYL Trigger: CAAGTATATTCTGCTGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGATCATTAATAAAGCTTTTCTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCCTGTTCTGTTACCTCTaGGCTCTCATCCTCTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCLFCYL*ALILSY Trigger: ATAGGAGAGGATGAGAGCCCAGAGGTAACAGAACAG...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| 3UTR-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGCTGTTCTGTTACCTCTaGGCTCTCATCCTCTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMLFCYL*ALILSY Trigger: ATAGGAGAGGATGAGAGCCCAGAGGTAACAGAACAG...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTACTACCAACACCACTaGAGGAAGCAAGAAAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LEDSVVDHFFISYLQQDTYYQHH*RKQEKL Trigger: AAGCTTTTCTTGCTTCCTTCAGTGGTGTTGGTAGTA...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR TCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATGTTATTTCCATAACCTaGAGCTGTTCTGTTACCTCT | + |
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Preference number: 2 (lower is better) Translates to: FTKWLSASALVSSAIPLHVISIT*SCSVTS Trigger: AGAGGTAACAGAACAGCTTCAGGTTATGGAAATAAC...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAACCTCAGCTGTTGAAATaGAGCACTTTACAGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKPQLLK*STLQSL Trigger: CAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGG...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCATTTTCCTCAGCTGTTGAAATaGAGCACTTTACAGTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SVVDHFFISYLQQDTFHFPQLLK*STLQSL Trigger: CAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGG...AAAATGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCTTGAAGACTCTGTaGTTGACCACTTCTTCATTA | + |
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Preference number: 2 (lower is better) Translates to: LEDSVVDHFFISYLQQDTFLKTL*LTTSSL Trigger: TAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAA...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCGAATATACTTGTCCATaGTTCATATCAATGCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: LEDSVVDHFFISYLQQDTEYTCP*FISMPW Trigger: CCATGGCATTGATATGAACCATGGACAAGTATATTC...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCACTTTACAGTCTTTGTaGCAGCAGAATATACTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LEDSVVDHFFISYLQQDTTLQSL*QQNILV Trigger: GACAAGTATATTCTGCTGCCACAAAGACTGTAAAGT...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAAACTTTACAGTCTTTGTaGCAGCAGAATATACTTGTC | + |
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Preference number: 2 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKTLQSL*QQNILV Trigger: GACAAGTATATTCTGCTGCCACAAAGACTGTAAAGT...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGAATATACTTGTCCATaGTTCATATCAATGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: LFLEDSVVDHFFISYLQQEYTCP*FISMPW Trigger: CCATGGCATTGATATGAACCATGGACAAGTATATTC...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAGAAAGTGCTTCTTAAATaGAGGCACCAACAAGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: TTDVDRTRFTLMCKHYTKKVLLK*RHQQEL Trigger: TAGTTCTTGTTGGTGCCTTCATTTAAGAAGCACTTT...CTTGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
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| 3UTR GCA 72 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTaGAGCAAGACACCTTCCATTTTACTACCAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: KTLWLTTSSLVT*SKTPSILLPTP Trigger: TGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAATTGAAGACTCTGTGGTaGACCACTTCTTCATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKLKTLW*TTSSLV Trigger: AACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAA...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAAAGCACTTTACAGTCTTaGTGGCAGCAGAATATACTT | + |
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Preference number: 3 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKSTLQS*WQQNIL Trigger: AAGTATATTCTGCTGCCACAAAGACTGTAAAGTGCT...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR TCA 72 bp | AGCTTTATTAATGATCACTTGGCTTGCCTCAGCTGTTaGAATGAAGCACTTTACAGTCTTTGTGGCAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SFINDHLACLSC*NEALYSLCGSR Trigger: TCTGCTGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGATCATTAATAAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| 3UTR TCA 72 bp | GATAAGAGTTTCCTTAACATTGTTATTTCCATAACCTaGAGCTGTTCTGTTACCTCTGGGCTCTCATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: DKSFLNIVISIT*SCSVTSGLSSS Trigger: AGAGGATGAGAGCCCAGAGGTAACAGAACAGCTTCAGGTTATGGAAATAACAATGTTAAGGAAACTCTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| 3UTR-3UTR CAA 90 bp | ACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAGTTGAAGACTCTGTGGTaGACCACTTCTTCATTAGTT | + |
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Preference number: 3 (lower is better) Translates to: TTDVDRTRFTLMCKHYTKLKTLW*TTSSLV Trigger: AACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAA...CTTGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGT 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
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| CDS-3UTR CCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCGGGGCCTTGCAGCCATaGCAGCGTCAACCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCGALQP*QRQPRP Trigger: TGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCC...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CCA 90 bp | TGGCTTGCCTCAGCTGTTGAAATGAAGCACTTTACAGTCTTTGTGGCAGCAGAAGGGGCCTTGCAGCCATaGCAGCGTCAACCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WLASAVEMKHFTVFVAAEGALQP*QRQPRP Trigger: TGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCC...TTCTGCTGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGGGGGCCTTGCAGCCATaGCAGCGTCAACCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMGALQP*QRQPRP Trigger: TGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCC...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR GCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATAGCCCCCACCCTGGTTaGCATATCCAGGTCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHSPHPG*HIQVLH Trigger: GTGGAGGACCTGGATATGGCAACCAGGGTGGGGGCT...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 |
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| CDS-3UTR GCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGAGCCCCCACCCTGGTTaGCATATCCAGGTCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMSPHPG*HIQVLH Trigger: GTGGAGGACCTGGATATGGCAACCAGGGTGGGGGCT...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 |
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| CDS-3UTR CCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCCTGCCATCAATGGAATaGGGCCTTGCAGCCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCLPSME*GLAAMA Trigger: TGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAG...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR GCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATAATGGAATGGGGCCTTaGAGCCATGGCAGCGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHNGMGP*SHGSVN Trigger: GTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATT...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR GCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCTTGGCTCAACTACCCTaGCATCAATGGAATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCLAQLP*HQWNGA Trigger: GGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAA...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR GCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCGTCCTGGTCCAAAATTaGCACCGCCACCACGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCVLVQN*HRHHEN Trigger: ATTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGAC...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR GCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCGTCCTCCCATGTTCCTaGTACCCCCAAAGTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCVLPCS*YPQSFH Trigger: GTGGAAACTTTGGGGGTAGCAGGAACATGGGAGGAC...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CCA 90 bp | AGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAGGGGCCTTGCAGCCATaGCAGCGTCAACCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLCGSRIYLSMVHINAMVGALQP*QRQPRP Trigger: TGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCC...TACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATCTACCCTGCCATCAATaGAATGGGGCCTTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHLPCHQ*NGALQP Trigger: TGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAG...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR GCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGAATGGAATGGGGCCTTaGAGCCATGGCAGCGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMNGMGP*SHGSVN Trigger: GTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATT...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR GCA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCAATGGAATGGGGCCTTaGAGCCATGGCAGCGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: EDSVVDHFFISYLQQDTFNGMGP*SHGSVN Trigger: GTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATT...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR GCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCTCCAGACTCCTCTCTTaGTACAGCACGTTTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCSRLLS*YSTFWL Trigger: GAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGA...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGGGGCCTTGCAGCCATaGCAGCGTCAACCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQGALQP*QRQPRP Trigger: TGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCC...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGCTGCCATCAATGGAATaGGGCCTTGCAGCCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMLPSME*GLAAMA Trigger: TGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAG...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CCA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCTACCCTGCCATCAATaGAATGGGGCCTTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSLPCHQ*NGALQP Trigger: TGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAG...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGCTACCCTGCCATCAATaGAATGGGGCCTTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMLPCHQ*NGALQP Trigger: TGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAG...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCTGCTACAGCACGTTTTaGCTCAACTACCCTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCCYSTF*LNYPAI Trigger: GATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCA...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGGTTGCTTCCTGGTCCTaGTCCAAAATTGCCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMVASWS*SKIATA Trigger: GGCGGTGGCAATTTTGGACCAGGACCAGGAAGCAAC...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATGTTCCCTCCACCATATaGTCCTCCCATGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHVPSTI*SSHVPA Trigger: AGCAGGAACATGGGAGGACCATATGGTGGAGGGAAC...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCTTGGCTCAACTACCCTaGCATCAATGGAATGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EDSVVDHFFISYLQQDTFLAQLP*HQWNGA Trigger: GGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAA...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGTTGGCTCAACTACCCTaGCATCAATGGAATGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMLAQLP*HQWNGA Trigger: GGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAA...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATTCCAGACTCCTCTCTTaGTACAGCACGTTTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHSRLLS*YSTFWL Trigger: GAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGA...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGGTCCTGGTCCAAAATTaGCACCGCCACCACGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMVLVQN*HRHHEN Trigger: ATTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGAC...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCGTCCTCCCATGTTCCTaGTACCCCCAAAGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EDSVVDHFFISYLQQDTFVLPCS*YPQSFH Trigger: GTGGAAACTTTGGGGGTAGCAGGAACATGGGAGGAC...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAAGCCCCCACCCTGGTTaGCATATCCAGGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCGSRIYLSMVHINAMVSPHPG*HIQVLH Trigger: GTGGAGGACCTGGATATGGCAACCAGGGTGGGGGCT...TACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 |
||
| CDS-3UTR CCA 90 bp | ATCACTTGGCTTGCCTCAGCTGTTGAAATGAAGCACTTTACAGTCTTTGTGGCACTGCCATCAATGGAATaGGGCCTTGCAGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITWLASAVEMKHFTVFVALPSME*GLAAMA Trigger: TGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAG...TGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATTGCTACAGCACGTTTTaGCTCAACTACCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHCYSTF*LNYPAI Trigger: GATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCA...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCGTTCCCTCCACCATATaGTCCTCCCATGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEDSVVDHFFISYLQQDTVPSTI*SSHVPA Trigger: AGCAGGAACATGGGAGGACCATATGGTGGAGGGAAC...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCGTTCCCTCCACCATATaGTCCTCCCATGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDSVVDHFFISYLQQDTFVPSTI*SSHVPA Trigger: AGCAGGAACATGGGAGGACCATATGGTGGAGGGAAC...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGGTTCCCTCCACCATATaGTCCTCCCATGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMVPSTI*SSHVPA Trigger: AGCAGGAACATGGGAGGACCATATGGTGGAGGGAAC...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR TCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCAACCTCGGCCATGGATaGGAAAGTTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCNLGHG*ESYKAK Trigger: TTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTT...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACAATGGAATGGGGCCTTaGAGCCATGGCAGCGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLEDSVVDHFFISYLQQDNGMGP*SHGSVN Trigger: GTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATT...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTCCAGACTCCTCTCTTaGTACAGCACGTTTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEDSVVDHFFISYLQQDTSRLLS*YSTFWL Trigger: GAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGA...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCTCCAGACTCCTCTCTTaGTACAGCACGTTTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EDSVVDHFFISYLQQDTFSRLLS*YSTFWL Trigger: GAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGA...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAAGTAGGAAGAAGAGCCCCCACCCTGGTTaGCATATCCAGGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRIYLSMVHINAMVSRKKSPHPG*HIQVLH Trigger: GTGGAGGACCTGGATATGGCAACCAGGGTGGGGGCT...CTTCTTCCTACTTACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 |
||
| CDS-3UTR CCA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCTGCTACAGCACGTTTTaGCTCAACTACCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EDSVVDHFFISYLQQDTFCYSTF*LNYPAI Trigger: GATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCA...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCTGCTACAGCACGTTTTaGCTCAACTACCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSCYSTF*LNYPAI Trigger: GATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCA...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATCCTAAAGTTGCTTCCTaGTCCTGGTCCAAAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHPKVAS*SWSKIA Trigger: GGCAATTTTGGACCAGGACCAGGAAGCAACTTTAGG...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR TCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCAAAGCCAAATCCTCTTaGTCTTTTGCTTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCKAKSS*SFACRI Trigger: GATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTT...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR TCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATAACCTCGGCCATGGATaGGAAAGTTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHNLGHG*ESYKAK Trigger: TTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTT...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCATTTTTTGGCTCAACTACCCTaGCATCAATGGAATGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVVDHFFISYLQQDTFHFLAQLP*HQWNGA Trigger: GGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAA...AAAATGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | ATCACTTGGCTTGCCTCAGCTGTTGAAATGAAGCACTTTACAGTCTTTGTGGCATGCTACAGCACGTTTTaGCTCAACTACCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ITWLASAVEMKHFTVFVACYSTF*LNYPAI Trigger: GATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCA...TGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCCCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCPLLEL*TSCISC Trigger: ACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGG...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CCA 90 bp | AGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAGTTGCTTCCTGGTCCTaGTCCAAAATTGCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCGSRIYLSMVHINAMVVASWS*SKIATA Trigger: GGCGGTGGCAATTTTGGACCAGGACCAGGAAGCAAC...TACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TCTTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCGTTGCTTCCTGGTCCTaGTCCAAAATTGCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYFLKTLWLTTSSLVTCSVASWS*SKIATA Trigger: GGCGGTGGCAATTTTGGACCAGGACCAGGAAGCAAC...GCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCCTAAAGTTGCTTCCTaGTCCTGGTCCAAAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSPKVAS*SWSKIA Trigger: GGCAATTTTGGACCAGGACCAGGAAGCAACTTTAGG...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGCCTAAAGTTGCTTCCTaGTCCTGGTCCAAAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMPKVAS*SWSKIA Trigger: GGCAATTTTGGACCAGGACCAGGAAGCAACTTTAGG...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCGTTTCCACTCTTCATTaGACCATAGTTAGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCVSTLH*TIVRRL Trigger: CAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAAC...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCATTTTGTTCCCTCCACCATATaGTCCTCCCATGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVVDHFFISYLQQDTFHFVPSTI*SSHVPA Trigger: AGCAGGAACATGGGAGGACCATATGGTGGAGGGAAC...AAAATGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR TCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATAAAGCCAAATCCTCTTaGTCTTTTGCTTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHKAKSS*SFACRI Trigger: GATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTT...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGCCTCAGCTGTTGAAATGAAGCACTTTACAGTCTTTGTGGCAGCAGAAAACCTCGGCCATGGATaGGAAAGTTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLASAVEMKHFTVFVAAENLGHG*ESYKAK Trigger: TTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTT...TTCTGCTGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR TCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGAACCTCGGCCATGGATaGGAAAGTTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMNLGHG*ESYKAK Trigger: TTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTT...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAAGTAGGAAGAAGAATGGAATGGGGCCTTaGAGCCATGGCAGCGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRIYLSMVHINAMVSRKKNGMGP*SHGSVN Trigger: GTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATT...CTTCTTCCTACTTACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TCTTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCGTCCTCCCATGTTCCTaGTACCCCCAAAGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYFLKTLWLTTSSLVTCSVLPCS*YPQSFH Trigger: GTGGAAACTTTGGGGGTAGCAGGAACATGGGAGGAC...GCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAGTCCTCCCATGTTCCTaGTACCCCCAAAGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCGSRIYLSMVHINAMVVLPCS*YPQSFH Trigger: GTGGAAACTTTGGGGGTAGCAGGAACATGGGAGGAC...TACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAAGTAGGAAGAAGCTGCCATCAATGGAATaGGGCCTTGCAGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRIYLSMVHINAMVSRKKLPSME*GLAAMA Trigger: TGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAG...CTTCTTCCTACTTACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAACTGCCATCAATGGAATaGGGCCTTGCAGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQLPSME*GLAAMA Trigger: TGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAG...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAACTACCCTGCCATCAATaGAATGGGGCCTTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQLPCHQ*NGALQP Trigger: TGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAG...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGTTGCTTCCTGGTCCTaGTCCAAAATTGCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQVASWS*SKIATA Trigger: GGCGGTGGCAATTTTGGACCAGGACCAGGAAGCAAC...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAACCTAAAGTTGCTTCCTaGTCCTGGTCCAAAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKPKVAS*SWSKIA Trigger: GGCAATTTTGGACCAGGACCAGGAAGCAACTTTAGG...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | CTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCATGGTGTTTCCACTCTTCATTaGACCATAGTTAGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWLTTSSLVTCSKTPSHGVSTLH*TIVRRL Trigger: CAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAAC...ACCATGGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR CCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATGTTTCCACTCTTCATTaGACCATAGTTAGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHVSTLH*TIVRRL Trigger: CAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAAC...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAAAACCTCGGCCATGGATaGGAAAGTTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKNLGHG*ESYKAK Trigger: TTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTT...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAATTGGCTCAACTACCCTaGCATCAATGGAATGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQLAQLP*HQWNGA Trigger: GGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAA...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCGAACTTTGGACTTCCTaGATTTCTTGTCTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCELWTS*ISCLDN Trigger: ATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTC...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGTCCTGGTCCAAAATTaGCACCGCCACCACGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQVLVQN*HRHHEN Trigger: ATTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGAC...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | CACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGGTCCTGGTCCAAAATTaGCACCGCCACCACGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HFTVFVAAEYTCPWFISMVLVQN*HRHHEN Trigger: ATTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGAC...CATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCGTCCTGGTCCAAAATTaGCACCGCCACCACGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLQSLWQQNILVHGSYQCVLVQN*HRHHEN Trigger: ATTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGAC...GCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCCCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEDSVVDHFFISYLQQDTPLLEL*TSCISC Trigger: ACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGG...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSPLLEL*TSCISC Trigger: ACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGG...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGCCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMPLLEL*TSCISC Trigger: ACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGG...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCGTTTCCACTCTTCATTaGACCATAGTTAGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEDSVVDHFFISYLQQDTVSTLH*TIVRRL Trigger: CAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAAC...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | CACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGTCCAGACTCCTCTCTTaGTACAGCACGTTTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFTVFVAAEYTCPWFISMSRLLS*YSTFWL Trigger: GAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGA...CATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAATCCAGACTCCTCTCTTaGTACAGCACGTTTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQSRLLS*YSTFWL Trigger: GAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGA...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCCTTTTCTTTCCAGACTaGCTATCGGTAATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCLFFPD*LSVIIS Trigger: TGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAG...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATTGCCTTTCTAACTTCTaGATTGTGACCATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHCLSNF*IVTIYG Trigger: ACCATAAATGGTCACAATGCAGAAGTTAGAAAGGCA...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCTTCTTGTCTAGACAATaGCTTTCTAACTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCFLSRQ*LSNFCI Trigger: AATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAA...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCATGGTGAACTTTGGACTTCCTaGATTTCTTGTCTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LWLTTSSLVTCSKTPSHGELWTS*ISCLDN Trigger: ATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTC...ACCATGGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR CCA 90 bp | ACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAGCTGCCATCAATGGAATaGGGCCTTGCAGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTDVDRTRFTLMCKHYTKLPSME*GLAAMA Trigger: TGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAG...CTTGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR CCA 90 bp | AGACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCACTACCCTGCCATCAATaGAATGGGGCCTTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLMLIEQDSHLCVSITPLPCHQ*NGALQP Trigger: TGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAG...TGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCTGCTACAGCACGTTTTaGCTCAACTACCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLQSLWQQNILVHGSYQCCYSTF*LNYPAI Trigger: GATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCA...GCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | ACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAGGTTGCTTCCTGGTCCTaGTCCAAAATTGCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTDVDRTRFTLMCKHYTKVASWS*SKIATA Trigger: GGCGGTGGCAATTTTGGACCAGGACCAGGAAGCAAC...CTTGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAAGTTTCCACTCTTCATTaGACCATAGTTAGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKVSTLH*TIVRRL Trigger: CAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAAC...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCTGCCTTTCTAACTTCTaGATTGTGACCATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSCLSNF*IVTIYG Trigger: ACCATAAATGGTCACAATGCAGAAGTTAGAAAGGCA...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGTGCCTTTCTAACTTCTaGATTGTGACCATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMCLSNF*IVTIYG Trigger: ACCATAAATGGTCACAATGCAGAAGTTAGAAAGGCA...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATTTCTTGTCTAGACAATaGCTTTCTAACTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWLSASALVSSAIPLHFLSRQ*LSNFCI Trigger: AATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAA...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGGAACTTTGGACTTCCTaGATTTCTTGTCTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMELWTS*ISCLDN Trigger: ATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTC...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCGAACTTTGGACTTCCTaGATTTCTTGTCTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSELWTS*ISCLDN Trigger: ATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTC...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | ACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAGGTCCTCCCATGTTCCTaGTACCCCCAAAGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTDVDRTRFTLMCKHYTKVLPCS*YPQSFH Trigger: GTGGAAACTTTGGGGGTAGCAGGAACATGGGAGGAC...CTTGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAACCTAAAGTTGCTTCCTaGTCCTGGTCCAAAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQPKVAS*SWSKIA Trigger: GGCAATTTTGGACCAGGACCAGGAAGCAACTTTAGG...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACGTTTCCACTCTTCATTaGACCATAGTTAGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLEDSVVDHFFISYLQQDVSTLH*TIVRRL Trigger: CAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAAC...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | ACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAGGTTCCCTCCACCATATaGTCCTCCCATGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTDVDRTRFTLMCKHYTKVPSTI*SSHVPA Trigger: AGCAGGAACATGGGAGGACCATATGGTGGAGGGAAC...CTTGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR TCA 90 bp | TCTTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAAGCCAAATCCTCTTaGTCTTTTGCTTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SYFLKTLWLTTSSLVTCSKAKSS*SFACRI Trigger: GATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTT...GCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCAACCTCGGCCATGGATaGGAAAGTTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQSLWQQNILVHGSYQCNLGHG*ESYKAK Trigger: TTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTT...GCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGCTTTTCTTTCCAGACTaGCTATCGGTAATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMLFFPD*LSVIIS Trigger: TGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAG...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAATGCCTTTCTAACTTCTaGATTGTGACCATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKCLSNF*IVTIYG Trigger: ACCATAAATGGTCACAATGCAGAAGTTAGAAAGGCA...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCTTGTCTAGACAATaGCTTTCTAACTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LEDSVVDHFFISYLQQDTFLSRQ*LSNFCI Trigger: AATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAA...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAAGAACTTTGGACTTCCTaGATTTCTTGTCTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKELWTS*ISCLDN Trigger: ATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTC...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | ATCACTTGGCTTGCCTCAGCTGTTGAAATGAAGCACTTTACAGTCTTTGTGGCAGAACTTTGGACTTCCTaGATTTCTTGTCTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITWLASAVEMKHFTVFVAELWTS*ISCLDN Trigger: ATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTC...TGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR TCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAAAAGCCAAATCCTCTTaGTCTTTTGCTTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQKAKSS*SFACRI Trigger: GATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTT...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAAGTAGGAAGAAGAAAGCCAAATCCTCTTaGTCTTTTGCTTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRIYLSMVHINAMVSRKKKAKSS*SFACRI Trigger: GATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTT...CTTCTTCCTACTTACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACTGCCTTTCTAACTTCTaGATTGTGACCATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLEDSVVDHFFISYLQQDCLSNF*IVTIYG Trigger: ACCATAAATGGTCACAATGCAGAAGTTAGAAAGGCA...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAAGTAGGAAGAAGCCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRIYLSMVHINAMVSRKKPLLEL*TSCISC Trigger: ACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGG...CTTCTTCCTACTTACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAACCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQPLLEL*TSCISC Trigger: ACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGG...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR TCA 90 bp | AGACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAACCTCGGCCATGGATaGGAAAGTTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQLMLIEQDSHLCVSITPNLGHG*ESYKAK Trigger: TTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTT...TGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACCTTTTCTTTCCAGACTaGCTATCGGTAATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLEDSVVDHFFISYLQQDLFFPD*LSVIIS Trigger: TGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAG...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCATTTTTTCTTGTCTAGACAATaGCTTTCTAACTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SVVDHFFISYLQQDTFHFFLSRQ*LSNFCI Trigger: AATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAA...AAAATGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACTTCTTGTCTAGACAATaGCTTTCTAACTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FLEDSVVDHFFISYLQQDFLSRQ*LSNFCI Trigger: AATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAA...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TCTTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCCTTTTCTTTCCAGACTaGCTATCGGTAATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYFLKTLWLTTSSLVTCSLFFPD*LSVIIS Trigger: TGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAG...GCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR GCA 90 bp | CACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGTGCCTTTCTAACTTCTaGATTGTGACCATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFTVFVAAEYTCPWFISMCLSNF*IVTIYG Trigger: ACCATAAATGGTCACAATGCAGAAGTTAGAAAGGCA...CATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAACTTTTCTTTCCAGACTaGCTATCGGTAATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLEDSVVDHFFISYLQQLFFPD*LSVIIS Trigger: TGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAG...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR GCA 90 bp | ACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCAAGCTTTTCTTTCCAGACTaGCTATCGGTAATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTDVDRTRFTLMCKHYTKLFFPD*LSVIIS Trigger: TGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAG...CTTGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
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| CDS-3UTR GCA 90 bp | AGACAACTGATGTTGATAGAACAAGATTCACACTTATGTGTAAGCATTACACCATTCTTGTCTAGACAATaGCTTTCTAACTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RQLMLIEQDSHLCVSITPFLSRQ*LSNFCI Trigger: AATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAA...TGGTGTAATGCTTACACATAAGTGTGAATCTTGTTCTATCAACATCAGTTGTCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS CCA 90 bp | CCTCTCTTGCTACAGCACGTTTTGGCTCAACTACCCTGCCATCAATaGAATGGGGCCTTGCAGCCATGGCAGCGTCAACCTCGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLQHVLAQLPCHQ*NGALQPWQRQPRPW Trigger: CCATGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS GCA 90 bp | TTCCAGACTCCTCTCTTGCTACAGCACGTTTTGGCTCAACTACCCTaGCATCAATGGAATGGGGCCTTGCAGCCATGGCAGCGTCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: FQTPLLLQHVLAQLP*HQWNGALQPWQRQP Trigger: AGGTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS CCA 90 bp | TTGGCTCAACTACCCTGCCATCAATGGAATGGGGCCTTGCAGCCATaGCAGCGTCAACCTCGGCCATGGATGAGAAAGTTACAAAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LAQLPCHQWNGALQP*QRQPRPWMRKLQSQ Trigger: TTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CAA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCCAATGGAATGGGGCCTaGCAGCCATGGCAGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCQWNGA*QPWQRQ Trigger: TTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTG...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCGGTCCTGGTCCAAAATaGCCACCGCCACCACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCGPGPK*PPPPRE Trigger: TTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACC...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | CTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCATGGTCAATGGAATGGGGCCTaGCAGCCATGGCAGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LWLTTSSLVTCSKTPSHGQWNGA*QPWQRQ Trigger: TTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTG...ACCATGGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
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| CDS-3UTR CAA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATCAATGGAATGGGGCCTaGCAGCCATGGCAGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FTKWLSASALVSSAIPLHQWNGA*QPWQRQ Trigger: TTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTG...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATGGGCTACCTCCAAAATaGCCACCTCCAGGTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FTKWLSASALVSSAIPLHGLPPK*PPPGPP Trigger: AGGAGGACCTGGAGGTGGCAATTTTGGAGGTAGCCC...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 |
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| CDS-3UTR CAA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCGGTCCTGGTCCAAAATaGCCACCGCCACCACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: EDSVVDHFFISYLQQDTFGPGPK*PPPPRE Trigger: TTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACC...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGGGTCCTGGTCCAAAATaGCCACCGCCACCACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMGPGPK*PPPPRE Trigger: TTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACC...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCGGTCCTGGTCCAAAATaGCCACCGCCACCACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LEDSVVDHFFISYLQQDTGPGPK*PPPPRE Trigger: TTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACC...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS CCA 90 bp | CAATGGAATGGGGCCTTGCAGCCATGGCAGCGTCAACCTCGGCCATaGATGAGAAAGTTACAAAGCCAAATCCTCTTGATCTTTTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QWNGALQPWQRQPRP*MRKLQSQILLIFCL Trigger: CAAGCAAAAGATCAAGAGGATTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAACAATGGAATGGGGCCTaGCAGCCATGGCAGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKQWNGA*QPWQRQ Trigger: TTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTG...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAAGGTCCTGGTCCAAAATaGCCACCGCCACCACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKGPGPK*PPPPRE Trigger: TTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACC...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATTTGCTACAGCACGTTTaGGCTCAACTACCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FTKWLSASALVSSAIPLHLLQHV*AQLPCH Trigger: ATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAA...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | CTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCATGGTTTCCAGACTCCTCTCTaGCTACAGCACGTTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWLTTSSLVTCSKTPSHGFQTPL*LQHVLA Trigger: AGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAA...ACCATGGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
||
| CDS-3UTR CAA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATTTCCAGACTCCTCTCTaGCTACAGCACGTTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTKWLSASALVSSAIPLHFQTPL*LQHVLA Trigger: AGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAA...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACGGGCTACCTCCAAAATaGCCACCTCCAGGTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLEDSVVDHFFISYLQQDGLPPK*PPPGPP Trigger: AGGAGGACCTGGAGGTGGCAATTTTGGAGGTAGCCC...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 |
||
| CDS-3UTR CAA 90 bp | CTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTGCTACAGCACGTTTaGGCTCAACTACCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LEDSVVDHFFISYLQQDTLLQHV*AQLPCH Trigger: ATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAA...GGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CAA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCTTGCTACAGCACGTTTaGGCTCAACTACCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSLLQHV*AQLPCH Trigger: ATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAA...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CAA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGTTGCTACAGCACGTTTaGGCTCAACTACCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMLLQHV*AQLPCH Trigger: ATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAA...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CAA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGTTCCAGACTCCTCTCTaGCTACAGCACGTTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMFQTPL*LQHVLA Trigger: AGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAA...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CAA 90 bp | AGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAGGTCCTGGTCCAAAATaGCCACCGCCACCACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLCGSRIYLSMVHINAMVGPGPK*PPPPRE Trigger: TTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACC...TACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
||
| CDS-3UTR CAA 90 bp | AGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAGGGCTACCTCCAAAATaGCCACCTCCAGGTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLCGSRIYLSMVHINAMVGLPPK*PPPGPP Trigger: AGGAGGACCTGGAGGTGGCAATTTTGGAGGTAGCCC...TACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 |
||
| CDS-3UTR CAA 90 bp | CATTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCCAAAGCCAAATCCTCTaGATCTTTTGCTTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HSQNGCLHLLWCLLPYHCQSQIL*IFCLQD Trigger: ATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTTG...GCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
||
| CDS-3UTR CAA 90 bp | CACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCAATGGAATGGGGCCTaGCAGCCATGGCAGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HFTVFVAAEYTCPWFISMQWNGA*QPWQRQ Trigger: TTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTG...CATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | ATCACTTGGCTTGCCTCAGCTGTTGAAATGAAGCACTTTACAGTCTTTGTGGCATTGCTACAGCACGTTTaGGCTCAACTACCCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: ITWLASAVEMKHFTVFVALLQHV*AQLPCH Trigger: ATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAA...TGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAATTCCAGACTCCTCTCTaGCTACAGCACGTTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKFQTPL*LQHVLA Trigger: AGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAA...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | CTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCATGGTTCCACTCCTAGAACTTaGGACTTCCTGCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LWLTTSSLVTCSKTPSHGSTPRT*DFLHFL Trigger: CAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGA...ACCATGGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069949.13 |
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| CDS-3UTR CAA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATTCCACTCCTAGAACTTaGGACTTCCTGCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FTKWLSASALVSSAIPLHSTPRT*DFLHFL Trigger: CAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGA...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGAATCCTCTTGATCTTTaGCTTGCAGGATCCCGCATA | + |
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Preference number: 5 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMNPLDL*LAGSRI Trigger: TATGCGGGATCCTGCAAGCAAAAGATCAAGAGGATT...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCAATCCTCTTGATCTTTaGCTTGCAGGATCCCGCATA | + |
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Preference number: 5 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSNPLDL*LAGSRI Trigger: TATGCGGGATCCTGCAAGCAAAAGATCAAGAGGATT...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | GAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCAATCCTCTTGATCTTTaGCTTGCAGGATCCCGCATA | + |
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Preference number: 5 (lower is better) Translates to: EDSVVDHFFISYLQQDTFNPLDL*LAGSRI Trigger: TATGCGGGATCCTGCAAGCAAAAGATCAAGAGGATT...GAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATCAAAGCCAAATCCTCTaGATCTTTTGCTTGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: FTKWLSASALVSSAIPLHQSQIL*IFCLQD Trigger: ATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTTG...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | TTCACAAAATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATGACTTCCTGCATTTCTaGTCTAGACAATGCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FTKWLSASALVSSAIPLHDFLHF*SRQCLS Trigger: AGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTC...ATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGTCCACTCCTAGAACTTaGGACTTCCTGCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMSTPRT*DFLHFL Trigger: CAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGA...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCCAAAGCCAAATCCTCTaGATCTTTTGCTTGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSQSQIL*IFCLQD Trigger: ATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTTG...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGCAAAGCCAAATCCTCTaGATCTTTTGCTTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMQSQIL*IFCLQD Trigger: ATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTTG...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | TCTTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCTTCCAGACTCCTCTCTaGCTACAGCACGTTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SYFLKTLWLTTSSLVTCSFQTPL*LQHVLA Trigger: AGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAA...GCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | AATGGCTGTCTGCATCTGCTCTGGTGTCTTCTGCCATACCACTGCATATTTATGGACTTCCTGCATTTCTaGTCTAGACAATGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NGCLHLLWCLLPYHCIFMDFLHF*SRQCLS Trigger: AGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTC...CATAAATATGCAGTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | AAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACACCTTCCGACTTCCTGCATTTCTaGTCTAGACAATGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTLWLTTSSLVTCSKTPSDFLHF*SRQCLS Trigger: AGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTC...GGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | ATCACTTGGCTTGCCTCAGCTGTTGAAATGAAGCACTTTACAGTCTTTGTGGCATCCACTCCTAGAACTTaGGACTTCCTGCATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ITWLASAVEMKHFTVFVASTPRT*DFLHFL Trigger: CAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGA...TGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACAATCCTCTTGATCTTTaGCTTGCAGGATCCCGCATA | + |
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Preference number: 5 (lower is better) Translates to: FLEDSVVDHFFISYLQQDNPLDL*LAGSRI Trigger: TATGCGGGATCCTGCAAGCAAAAGATCAAGAGGATT...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | AGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTAAGTAGGAAGAAGTTGCTACAGCACGTTTaGGCTCAACTACCCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SRIYLSMVHINAMVSRKKLLQHV*AQLPCH Trigger: ATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAA...CTTCTTCCTACTTACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | CTGCAGCAAGACACCTTCCATTTTACTACCAACACCACTGAAGGAAGCAAGAAAGACTTCCTGCATTTCTaGTCTAGACAATGCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LQQDTFHFTTNTTEGSKKDFLHF*SRQCLS Trigger: AGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTC...TTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | TTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACTCCACTCCTAGAACTTaGGACTTCCTGCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FLEDSVVDHFFISYLQQDSTPRT*DFLHFL Trigger: CAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGA...GTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS CCA 90 bp | GAATCCCCAAAACCAAAGTTTCCTCCTCTTCCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGTCTAGACAATGCCTTTCTAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: ESPKPKFPPLPLLEL*TSCISCLDNAFLTS Trigger: AGAAGTTAGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGAAGAGGAGGAAACTTTGGTTTTGGGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS-3UTR CAA 90 bp | ACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCAATCCTCTTGATCTTTaGCTTGCAGGATCCCGCATA | + |
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Preference number: 5 (lower is better) Translates to: TLQSLWQQNILVHGSYQCNPLDL*LAGSRI Trigger: TATGCGGGATCCTGCAAGCAAAAGATCAAGAGGATT...GCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | AGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCCATGGTACAAAGCCAAATCCTCTaGATCTTTTGCTTGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: SLCGSRIYLSMVHINAMVQSQIL*IFCLQD Trigger: ATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTTG...TACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | ACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCTCCACTCCTAGAACTTaGGACTTCCTGCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: TLQSLWQQNILVHGSYQCSTPRT*DFLHFL Trigger: CAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGA...GCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | CACTTTACAGTCTTTGTGGCAGCAGAATATACTTGTCCATGGTTCATATCAATGCAAAGCCAAATCCTCTaGATCTTTTGCTTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HFTVFVAAEYTCPWFISMQSQIL*IFCLQD Trigger: ATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTTG...CATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS-3UTR CAA 90 bp | TTATTTCTTGAAGACTCTGTGGTTGACCACTTCTTCATTAGTTACCTGCAGCAAGACTTCCTGCATTTCTaGTCTAGACAATGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLEDSVVDHFFISYLQQDFLHF*SRQCLS Trigger: AGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTC...TTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCAAGAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000203954.3 ENSMUST00000204158.3 |
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| CDS CCA 72 bp | GCACGTTTTGGCTCAACTACCCTGCCATCAATGGAATaGGGCCTTGCAGCCATGGCAGCGTCAACCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARFGSTTLPSME*GLAAMAASTSA Trigger: GGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS GCA 72 bp | CCTCTCTTGCTACAGCACGTTTTGGCTCAACTACCCTaGCATCAATGGAATGGGGCCTTGCAGCCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLLQHVLAQLP*HQWNGALQPWQ Trigger: CTGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS CCA 72 bp | CTACCCTGCCATCAATGGAATGGGGCCTTGCAGCCATaGCAGCGTCAACCTCGGCCATGGATGAGAAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LPCHQWNGALQP*QRQPRPWMRKL Trigger: TAACTTTCTCATCCATGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS CCA 72 bp | CTACAGCACGTTTTGGCTCAACTACCCTGCCATCAATaGAATGGGGCCTTGCAGCCATGGCAGCGTCAACCT | + |
|
Preference number: 6 (lower is better) Translates to: LQHVLAQLPCHQ*NGALQPWQRQP Trigger: AGGTTGACGCTGCCATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS CAA 90 bp | AGAATCCCCAAAACCAAAGTTTCCTCCTCTTCCACTCCTAGAACTTaGGACTTCCTGCATTTCTTGTCTAGACAATGCCTTTCTAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: RIPKTKVSSSSTPRT*DFLHFLSRQCLSNF Trigger: GAAGTTAGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGAAGAGGAGGAAACTTTGGTTTTGGGGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS CCA 72 bp | AAACCAAAGTTTCCTCCTCTTCCACTCCTAGAACTTTaGACTTCCTGCATTTCTTGTCTAGACAATGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KPKFPPLPLLEL*TSCISCLDNAF Trigger: AAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGAAGAGGAGGAAACTTTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS CAA 90 bp | GTTTCCTCCTCTTCCACTCCTAGAACTTTGGACTTCCTGCATTTCTaGTCTAGACAATGCCTTTCTAACTTCTGCATTGTGACCATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: VSSSSTPRTLDFLHF*SRQCLSNFCIVTIY Trigger: ATAAATGGTCACAATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGAAGAGGAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000069949.13 ENSMUST00000090002.10 ENSMUST00000114459.8 ENSMUST00000203220.3 ENSMUST00000203954.3 ENSMUST00000204158.3 ENSMUST00000204188.3 |
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| CDS CAA 90 bp | ATAGTTGTCATAACCACTCCTAGAACTTTGGACTTCCTGCATTTCTaGTCTAGACAATGCCTTTCTAACTTCTGCATTGTGACCATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: IVVITTPRTLDFLHF*SRQCLSNFCIVTIY Trigger: ATAAATGGTCACAATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGTTATGACAACTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203253.2 |
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