Pregenerated sensors for HNMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026986Ensembl transcript IDs: ENSMUST00000051416.12, ENSMUST00000114497.2, ENSMUST00000114498.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTaGCTTTATGATGCTGTTAATAAAGCATATGATAGAAACTACTAT | + |
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Preference number: 1 (lower is better) Translates to: TEHRQVLGKSHPTSP*LYDAVNKAYDRNYY Trigger: ATAGTAGTTTCTATCATATGCTTTATTAACAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| 3UTR CCA 90 bp | AGCCAAAAGTGGCCCACATGGTTCTTAAGAAAGCCTAAGTTGTCTTaGAAATTTGTAGATTTCATTATAAGGGATAATATTGCATCCTAT | + |
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Preference number: 1 (lower is better) Translates to: SQKWPTWFLRKPKLS*KFVDFIIRDNIASY Trigger: ATAGGATGCAATATTATCCCTTATAATGAAATCTACAAATTTCCAAGACAACTTAGGCTTTCTTAAGAACCATGTGGGCCACTTTTGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| 3UTR-3UTR CCA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACCAAAAGTGGCCCACATaGTTCTTAAGAAAGCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: STLNIGRSLGRAIPPAPDQKWPT*FLRKPK Trigger: CTTAGGCTTTCTTAAGAACCATGTGGGCCACTTTTG...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCCAAAAGTGGCCCACATaGTTCTTAAGAAAGCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: SHMFSVRQCLDRVFSFKIQKWPT*FLRKPK Trigger: CTTAGGCTTTCTTAAGAACCATGTGGGCCACTTTTG...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| 3UTR CAA 90 bp | GATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGAAAGCCTAAGTaGTCTTGGAAATTTGTAGATTTCATTATAAGGGATAATATTGCA | + |
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Preference number: 2 (lower is better) Translates to: DHSQKWPTWFLRKPK*SWKFVDFIIRDNIA Trigger: TGCAATATTATCCCTTATAATGAAATCTACAAATTTCCAAGACAACTTAGGCTTTCTTAAGAACCATGTGGGCCACTTTTGGCTGTGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| 3UTR TCA 72 bp | CGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTaGCTTTATGATGCTGTTAATAAAGCATATGATAGA | + |
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Preference number: 3 (lower is better) Translates to: RQVLGKSHPTSP*LYDAVNKAYDR Trigger: TCTATCATATGCTTTATTAACAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| 3UTR CCA 72 bp | AGACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTaGCCCACATGGTTCTTAAGAAAGCCTAAGTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: RQSIFFQDHSQK*PTWFLRKPKLS Trigger: AGACAACTTAGGCTTTCTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| 3UTR CCA 72 bp | ATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATaGTTCTTAAGAAAGCCTAAGTTGTCTTGGAAATTT | + |
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Preference number: 3 (lower is better) Translates to: IFFQDHSQKWPT*FLRKPKLSWKF Trigger: AAATTTCCAAGACAACTTAGGCTTTCTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | ATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTATGATGCTGAAGGTCAACTTCACCTaGACCTCCGCCTACACTCAG | + |
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Preference number: 4 (lower is better) Translates to: IGRSLGRAIPPAPDFMMLKVNFT*TSAYTQ Trigger: CTGAGTGTAGGCGGAGGTGCAGGTGAAGTTGACCTT...CAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTATCCATGAATTCCTaGATGCACTGGTGTTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: STLNIGRSLGRAIPPAPDLSMNS*MHWCSV Trigger: CACGGAACACCAGTGCATGCAGGAATTCATGGATAA...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACAGGTCATCCAGTATCTaGGCAAGATCAGAAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: STLNIGRSLGRAIPPAPDRSSSI*ARSEDV Trigger: CACATCTTCTGATCTTGCGCAGATACTGGATGACCT...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTATGATGCTGCAGATTCCTGGGTATTaGGCCTGGACTTTGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: IGRSLGRAIPPAPDFMMLQIPGY*AWTLER Trigger: TCTTTCCAAAGTCCAGGCTCAATACCCAGGAATCTG...CAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTCTACGTATCTGCCTTaGTCAGAAAATAAGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: STLNIGRSLGRAIPPAPDSTYLP*SENKLL Trigger: GAGGAGCTTATTTTCTGACCAAGGCAGATACGTAGA...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTGCACTGGTGTTCCGTaGAATTATTTAGAAACCTCC | + |
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Preference number: 4 (lower is better) Translates to: STLNIGRSLGRAIPPAPDCTGVP*NYLETS Trigger: GGAGGTTTCTAAATAATTCCACGGAACACCAGTGCA...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCAAAGTCCCACTTCGGTaGCTCTTCTTCTTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPKVPLR*LFFFFQ Trigger: CTGGAAGAAGAAGAAGAGCCACCGAAGTGGGACTTT...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | TATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTCAAGATCAGAAGATGTaGCATACTGGCAGAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: YSTLNIGRSLGRAIPPAPQDQKM*HTGRGH Trigger: ATGACCTCTGCCAGTATGTCACATCTTCTGATCTTG...AGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGCTTCTCCAATCCTTaGTATTATGCCCGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPCFSNP*YYARKL Trigger: AAGCTTCCGGGCATAATAGCAAGGATTGGAGAAGCA...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTGCTTTGAGATCCAGTaGTGCTGTTTTGCTAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: STLNIGRSLGRAIPPAPDCFEIQ*CCFAKV Trigger: AACTTTAGCAAAACAGCACCACTGGATCTCAAAGCA...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTATGATGCTGTATGTTCTCCATGTTTaGTGTCTTGGCTACAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: IGRSLGRAIPPAPDFMMLYVLHV*CLGYKL Trigger: GAGCTTGTAGCCAAGACATCAAACATGGAGAACATA...CAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTGAGATCCAGTGGTaGTGTTTTGCTAAAGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: STLNIGRSLGRAIPPAPDFEIQW*CFAKVT Trigger: TGTAACTTTAGCAAAACAGCACCACTGGATCTCAAA...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGCACTGGTGTTCCGTaGAATTATTTAGAAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPCTGVP*NYLETS Trigger: GGAGGTTTCTAAATAATTCCACGGAACACCAGTGCA...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCCAAGCTCTTTGTACTTaGCAATTTGTTCAGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPQALCT*QFVQHL Trigger: CAAGTGCTGAACAAATTGTCAAGTACAAAGAGCTTG...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTCCAGCATACGTTTTTaGTATTCAGATGATGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPSSIRF*YSDDVS Trigger: GGAGACATCATCTGAATATCAAAAACGTATGCTGGA...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | ATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTATGATGCTGGTTAATACAGATTCCTaGGTATTGAGCCTGGACTTT | + |
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Preference number: 4 (lower is better) Translates to: IGRSLGRAIPPAPDFMMLVNTDS*VLSLDF Trigger: AAAGTCCAGGCTCAATACCCAGGAATCTGTATTAAC...CAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | TATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTCCATGTTTGATGTCTTaGCTACAAGCTCTTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: YSTLNIGRSLGRAIPPAPPCLMS*LQALCT Trigger: AGTACAAAGAGCTTGTAGCCAAGACATCAAACATGG...AGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCCCATGTTTGATGTCTTaGCTACAAGCTCTTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPPCLMS*LQALCT Trigger: AGTACAAAGAGCTTGTAGCCAAGACATCAAACATGG...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTTTTTGATATTCAGATaGTGTCTCCTTGTGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPFLIFR*CLLVPR Trigger: TCTTGGCACAAGGAGACATCATCTGAATATCAAAAA...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | TCCCTAGAGCTGAAGTCACAAATGGTTCCGAGGTGTAACATATGCATATTCCACGAAGCTTCTTATCCATaGATTCCTGCATGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLELKSQMVPRCNICIFHEASYP*IPACTG Trigger: ACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTC...GTGGAATATGCATATGTTACACCTCGGAACCATTTGTGACTTCAGCTCTAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | TCCCTAGAGCTGAAGTCACAAATGGTTCCGAGGTGTAACATATGCATATTCCACCAAGATCAGAAGATGTaGCATACTGGCAGAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SLELKSQMVPRCNICIFHQDQKM*HTGRGH Trigger: ATGACCTCTGCCAGTATGTCACATCTTCTGATCTTG...GTGGAATATGCATATGTTACACCTCGGAACCATTTGTGACTTCAGCTCTAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | AACATATGCATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCGGAAAAATTTCAGGGTaGCTGGAATATCCTTTACAT | + |
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Preference number: 4 (lower is better) Translates to: NICIFHTEHRQVLGKSHPGKISG*LEYPLH Trigger: ATGTAAAGGATATTCCAGCCACCCTGAAATTTTTCC...GGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATATGCATATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGGAAGATGTGACATACTaGCAGAGGTCATCCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKEDVTY*QRSSLG Trigger: ACCGAGGGATGACCTCTGCCAGTATGTCACATCTTC...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGAAAGTCCCACTTCGGTaGCTCTTCTTCTTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKKVPLR*LFFFFQ Trigger: CTGGAAGAAGAAGAAGAGCCACCGAAGTGGGACTTT...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGGAAGCTTCTTATCCATaGATTCCTGCATGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKEASYP*IPACTG Trigger: ACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTC...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | TCCCTAGAGCTGAAGTCACAAATGGTTCCGAGGTGTAACATATGCATATTCCACTTTTTGATATTCAGATaGTGTCTCCTTGTGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SLELKSQMVPRCNICIFHFLIFR*CLLVPR Trigger: TCTTGGCACAAGGAGACATCATCTGAATATCAAAAA...GTGGAATATGCATATGTTACACCTCGGAACCATTTGTGACTTCAGCTCTAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | TCCCTAGAGCTGAAGTCACAAATGGTTCCGAGGTGTAACATATGCATATTCCACAAGATTCTACGTATCTaGCTTGGTCAGAAAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: SLELKSQMVPRCNICIFHKILRI*LGQKIS Trigger: GCTTATTTTCTGACCAAGGCAGATACGTAGAATCTT...GTGGAATATGCATATGTTACACCTCGGAACCATTTGTGACTTCAGCTCTAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | TCCCTAGAGCTGAAGTCACAAATGGTTCCGAGGTGTAACATATGCATATTCCACATCTTTCATAATTTCTaGTTTGAGATCCAGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SLELKSQMVPRCNICIFHIFHNF*FEIQWC Trigger: GCACCACTGGATCTCAAAGCAGAAATTATGAAAGAT...GTGGAATATGCATATGTTACACCTCGGAACCATTTGTGACTTCAGCTCTAGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCGAAGATGTGACATACTaGCAGAGGTCATCCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: SHMFSVRQCLDRVFSFKIEDVTY*QRSSLG Trigger: ACCGAGGGATGACCTCTGCCAGTATGTCACATCTTC...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGACTTTGGAAAGAATTTaGAGGTCAACTTCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKTLERI*RSTSPA Trigger: TGCAGGTGAAGTTGACCTTCAAATTCTTTCCAAAGT...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGCAAGCTCTTTGTACTTaGCAATTTGTTCAGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKQALCT*QFVQHL Trigger: CAAGTGCTGAACAAATTGTCAAGTACAAAGAGCTTG...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGTCCAGCATACGTTTTTaGTATTCAGATGATGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKSSIRF*YSDDVS Trigger: GGAGACATCATCTGAATATCAAAAACGTATGCTGGA...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR CCA 90 bp | AGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGAAAGTCTACGTATCTGCCTTaGTCAGAAAATAAGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SIFFQDHSQKWPTWFLRKSTYLP*SENKLL Trigger: GAGGAGCTTATTTTCTGACCAAGGCAGATACGTAGA...CTTTCTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR TCA 90 bp | AGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGAAAGACTTTGGAAAGAATTTaGAGGTCAACTTCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SIFFQDHSQKWPTWFLRKTLERI*RSTSPA Trigger: TGCAGGTGAAGTTGACCTTCAAATTCTTTCCAAAGT...CTTTCTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGAAGATTCTACGTATCTaGCTTGGTCAGAAAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKKILRI*LGQKIS Trigger: GCTTATTTTCTGACCAAGGCAGATACGTAGAATCTT...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
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| CDS-3UTR GCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCTGCTTCTCCAATCCTTaGTATTATGCCCGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHMFSVRQCLDRVFSFKICFSNP*YYARKL Trigger: AAGCTTCCGGGCATAATAGCAAGGATTGGAGAAGCA...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCAGGTCATCCAGTATCTaGGCAAGATCAGAAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHMFSVRQCLDRVFSFKIRSSSI*ARSEDV Trigger: CACATCTTCTGATCTTGCGCAGATACTGGATGACCT...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGATCTTTCATAATTTCTaGTTTGAGATCCAGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKIFHNF*FEIQWC Trigger: GCACCACTGGATCTCAAAGCAGAAATTATGAAAGAT...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCTATGTTCTCCATGTTTaGTGTCTTGGCTACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHMFSVRQCLDRVFSFKIYVLHV*CLGYKL Trigger: GAGCTTGTAGCCAAGACATCAAACATGGAGAACATA...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CCA 90 bp | AGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGAAAGGGAAAAATTTCAGGGTaGCTGGAATATCCTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFFQDHSQKWPTWFLRKGKISG*LEYPLH Trigger: ATGTAAAGGATATTCCAGCCACCCTGAAATTTTTCC...CTTTCTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCTGCTTTGAGATCCAGTaGTGCTGTTTTGCTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHMFSVRQCLDRVFSFKICFEIQ*CCFAKV Trigger: AACTTTAGCAAAACAGCACCACTGGATCTCAAAGCA...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCTTTGAGATCCAGTGGTaGTGTTTTGCTAAAGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SHMFSVRQCLDRVFSFKIFEIQW*CFAKVT Trigger: TGTAACTTTAGCAAAACAGCACCACTGGATCTCAAA...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| 3UTR CAA 72 bp | CAAAAGTGGCCCACATGGTTCTTAAGAAAGCCTAAGTaGTCTTGGAAATTTGTAGATTTCATTATAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKWPTWFLRKPK*SWKFVDFIIRD Trigger: ATCCCTTATAATGAAATCTACAAATTTCCAAGACAACTTAGGCTTTCTTAAGAACCATGTGGGCCACTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCGATGATGTCTCCTTGTaGCAAGAAAATTTTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHMFSVRQCLDRVFSFKIDDVSL*QENFMF Trigger: GAACATAAAATTTTCTTGGCACAAGGAGACATCATC...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACGGCTCAACAACTTCATaGTTAATACAGATTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: STLNIGRSLGRAIPPAPDGSTTS*LIQIPG Trigger: CCCAGGAATCTGTATTAACAATGAAGTTGTTGAGCC...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | TCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTGTACTTGACAATTaGTTCAGCACTTGGCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: STLNIGRSLGRAIPPAPDFVLDN*FSTWLN Trigger: GTTGAGCCAAGTGCTGAACAAATTGTCAAGTACAAA...GTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS CCA 90 bp | CCCAGGTCATCCAGTATCTGCGCAAGATCAGAAGATGTGACATACTaGCAGAGGTCATCCCTCGGTAGGCGGGATCCATACTTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRSSSICARSEDVTY*QRSSLGRRDPYFFH Trigger: ATGGAAAAAGTATGGATCCCGCCTACCGAGGGATGACCTCTGCCAGTATGTCACATCTTCTGATCTTGCGCAGATACTGGATGACCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCGACTTTGGAAAGAATTaGAAGGTCAACTTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPDFGKN*KVNFTC Trigger: GCAGGTGAAGTTGACCTTCAAATTCTTTCCAAAGTC...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTATGATGCTGTCCATGTTTGATGTCTaGGCTACAAGCTCTTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IGRSLGRAIPPAPDFMMLSMFDV*ATSSLY Trigger: GTACAAAGAGCTTGTAGCCAAGACATCAAACATGGA...CAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTATGATGCTGTCCAGTGGTGCTGTTTaGCTAAAGTTACAGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGRSLGRAIPPAPDFMMLSSGAV*LKLQVS Trigger: AGAAACCTGTAACTTTAGCAAAACAGCACCACTGGA...CAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | TATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTTCCAGTGGTGCTGTTTaGCTAAAGTTACAGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YSTLNIGRSLGRAIPPAPSSGAV*LKLQVS Trigger: AGAAACCTGTAACTTTAGCAAAACAGCACCACTGGA...AGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | TATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTCAATTTGTTCAGCACTaGGCTCAACAACTTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: YSTLNIGRSLGRAIPPAPQFVQH*AQQLHC Trigger: ACAATGAAGTTGTTGAGCCAAGTGCTGAACAAATTG...AGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCCAATTTGTTCAGCACTaGGCTCAACAACTTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPQFVQH*AQQLHC Trigger: ACAATGAAGTTGTTGAGCCAAGTGCTGAACAAATTG...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | TATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTTTATGTTCTCCATGTTaGATGTCTTGGCTACAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YSTLNIGRSLGRAIPPAPLCSPC*MSWLQA Trigger: AGCTTGTAGCCAAGACATCAAACATGGAGAACATAA...AGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTGACTTTATGATGCTGTTCATAATTTCTGCTTaGAGATCCAGTGGTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IGRSLGRAIPPAPDFMMLFIISA*RSSGAV Trigger: AACAGCACCACTGGATCTCAAAGCAGAAATTATGAA...CAGCATCATAAAGTCAGGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCACCAGCCCCTCAGATGATGTCTCCTaGTGCCAAGAAAATTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: IFHTEHRQVLGKSHPTSPSDDVS*CQENFM Trigger: CATAAAATTTTCTTGGCACAAGGAGACATCATCTGA...GGGGCTGGTGGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTAGAGCTGAAGTCACAAATGGTTCCGAGGTGTAACATATGCATATTCCACTTGCTTCTCCAATCCTaGCTATTATGCCCGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLELKSQMVPRCNICIFHLLLQS*LLCPEA Trigger: AGCTTCCGGGCATAATAGCAAGGATTGGAGAAGCAA...GTGGAATATGCATATGTTACACCTCGGAACCATTTGTGACTTCAGCTCTAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | AACATATGCATATTCCACACTGAACATCGGCAGGTCCTTGGGAAGAGCCATCCCTTATGTTCTCCATGTTaGATGTCTTGGCTACAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NICIFHTEHRQVLGKSHPLCSPC*MSWLQA Trigger: AGCTTGTAGCCAAGACATCAAACATGGAGAACATAA...GGGATGGCTCTTCCCAAGGACCTGCCGATGTTCAGTGTGGAATATGCATATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS GCA 90 bp | TTCACCTGCACCTCCGCCTACACTCAGAATCTTAATTTCTGCTTTTaGTTCTCCAATCCTTGCTATTATGCCCGGAAGCTTCTTATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FTCTSAYTQNLNFCF*FSNPCYYARKLLIH Trigger: ATGGATAAGAAGCTTCCGGGCATAATAGCAAGGATTGGAGAAGCAAAAGCAGAAATTAAGATTCTGAGTGTAGGCGGAGGTGCAGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS TCA 90 bp | TTGCTTCTCCAATCCTTGCTATTATGCCCGGAAGCTTCTTATCCATaGATTCCTGCATGCACTGGTGTTCCGTGGAATTATTTAGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSLLLCPEASYP*IPACTGVPWNYLET Trigger: GGTTTCTAAATAATTCCACGGAACACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTCCGGGCATAATAGCAAGGATTGGAGAAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS GCA 90 bp | CCAATCCTTGCTATTATGCCCGGAAGCTTCTTATCCATGAATTCCTaGATGCACTGGTGTTCCGTGGAATTATTTAGAAACCTCCGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PILAIMPGSFLSMNS*MHWCSVELFRNLRK Trigger: TTTTCGGAGGTTTCTAAATAATTCCACGGAACACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTCCGGGCATAATAGCAAGGATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS CCA 90 bp | GCTATTATGCCCGGAAGCTTCTTATCCATGAATTCCTGCATGCACTaGTGTTCCGTGGAATTATTTAGAAACCTCCGAAAAGATTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: AIMPGSFLSMNSCMH*CSVELFRNLRKDST Trigger: CGTAGAATCTTTTCGGAGGTTTCTAAATAATTCCACGGAACACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTCCGGGCATAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGTTGCTTCTCCAATCCTaGCTATTATGCCCGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKLLLQS*LLCPEA Trigger: AGCTTCCGGGCATAATAGCAAGGATTGGAGAAGCAA...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTAGAGCTGAAGTCACAAATGGTTCCGAGGTGTAACATATGCATATTCCACTTCATAATTTCTGCTTaGAGATCCAGTGGTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLELKSQMVPRCNICIFHFIISA*RSSGAV Trigger: AACAGCACCACTGGATCTCAAAGCAGAAATTATGAA...GTGGAATATGCATATGTTACACCTCGGAACCATTTGTGACTTCAGCTCTAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGGACTTTGGAAAGAATTaGAAGGTCAACTTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKDFGKN*KVNFTC Trigger: GCAGGTGAAGTTGACCTTCAAATTCTTTCCAAAGTC...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS CCA 90 bp | TTGTTCAGCACTTGGCTCAACAACTTCATTGTTAATACAGATTCCTaGGTATTGAGCCTGGACTTTGGAAAGAATTTGAAGGTCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFSTWLNNFIVNTDS*VLSLDFGKNLKVNF Trigger: GAAGTTGACCTTCAAATTCTTTCCAAAGTCCAGGCTCAATACCCAGGAATCTGTATTAACAATGAAGTTGTTGAGCCAAGTGCTGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | AGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGAAAGTTTGTACTTGACAATTaGTTCAGCACTTGGCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIFFQDHSQKWPTWFLRKFVLDN*FSTWLN Trigger: GTTGAGCCAAGTGCTGAACAAATTGTCAAGTACAAA...CTTTCTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGTATTTTCTTTCAAGATCACAGCCAAAAGTGGCCCACATGGTTCTTAAGTCAGATGATGTCTCCTaGTGCCAAGAAAATTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: TEYFLSRSQPKVAHMVLKSDDVS*CQENFM Trigger: CATAAAATTTTCTTGGCACAAGGAGACATCATCTGA...CTTAAGAACCATGTGGGCCACTTTTGGCTGTGATCTTGAAAGAAAATACTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS-3UTR CAA 90 bp | AGTCACATGTTTTCAGTTAGGCAGTGTTTAGACAGAGTATTTTCTTTCAAGATCTCCATGTTTGATGTCTaGGCTACAAGCTCTTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SHMFSVRQCLDRVFSFKISMFDV*ATSSLY Trigger: GTACAAAGAGCTTGTAGCCAAGACATCAAACATGGA...GATCTTGAAAGAAAATACTCTGTCTAAACACTGCCTAACTGAAAACATGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051416.12 ENSMUST00000114498.8 |
||
| CDS TCA 90 bp | TTAAAAAGTACCTTCCCCTCTTTCTTAACACTAAATTCAGGCTCTTaGAGATCTTTCATAATTTCTGCTTTGAGATCCAGTGGTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LKSTFPSFLTLNSGS*RSFIISALRSSGAV Trigger: AACAGCACCACTGGATCTCAAAGCAGAAATTATGAAAGATCTTCAAGAGCCTGAATTTAGTGTTAAGAAAGAGGGGAAGGTACTTTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS TCA 72 bp | CCAGGTCATCCAGTATCTGCGCAAGATCAGAAGATGTaGCATACTGGCAGAGGTCATCCCTCGGTAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGHPVSAQDQKM*HTGRGHPSVGG Trigger: CCCGCCTACCGAGGGATGACCTCTGCCAGTATGTCACATCTTCTGATCTTGCGCAGATACTGGATGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS CCA 72 bp | TCCAGTATCTGCGCAAGATCAGAAGATGTGACATACTaGCAGAGGTCATCCCTCGGTAGGCGGGATCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SSICARSEDVTY*QRSSLGRRDPY Trigger: GTATGGATCCCGCCTACCGAGGGATGACCTCTGCCAGTATGTCACATCTTCTGATCTTGCGCAGATACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS CAA 72 bp | GATTCCTGGGTATTGAGCCTGGACTTTGGAAAGAATTaGAAGGTCAACTTCACCTGCACCTCCGCCTACACT | + |
|
Preference number: 6 (lower is better) Translates to: DSWVLSLDFGKN*KVNFTCTSAYT Trigger: AGTGTAGGCGGAGGTGCAGGTGAAGTTGACCTTCAAATTCTTTCCAAAGTCCAGGCTCAATACCCAGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS TCA 72 bp | CAATCCTTGCTATTATGCCCGGAAGCTTCTTATCCATaGATTCCTGCATGCACTGGTGTTCCGTGGAATTAT | + |
|
Preference number: 6 (lower is better) Translates to: QSLLLCPEASYP*IPACTGVPWNY Trigger: ATAATTCCACGGAACACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTCCGGGCATAATAGCAAGGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS CCA 72 bp | CCCGGAAGCTTCTTATCCATGAATTCCTGCATGCACTaGTGTTCCGTGGAATTATTTAGAAACCTCCGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGSFLSMNSCMH*CSVELFRNLRK Trigger: TTTTCGGAGGTTTCTAAATAATTCCACGGAACACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTCCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS GCA 72 bp | GCTATTATGCCCGGAAGCTTCTTATCCATGAATTCCTaGATGCACTGGTGTTCCGTGGAATTATTTAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: AIMPGSFLSMNS*MHWCSVELFRN Trigger: GTTTCTAAATAATTCCACGGAACACCAGTGCATGCAGGAATTCATGGATAAGAAGCTTCCGGGCATAATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS CAA 90 bp | AGCACTTGGCTCAACAACTTCATTGTTAATACAGATTCCTGGGTATaGAGCCTGGACTTTGGAAAGAATTTGAAGGTCAACTTCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: STWLNNFIVNTDSWV*SLDFGKNLKVNFTC Trigger: GCAGGTGAAGTTGACCTTCAAATTCTTTCCAAAGTCCAGGCTCAATACCCAGGAATCTGTATTAACAATGAAGTTGTTGAGCCAAGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS CCA 72 bp | CAGCATCTGAATCATATGAATAAAGTCCCACTTCGGTaGCTCTTCTTCTTCTTCCAGCATACGTTTTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: QHLNHMNKVPLR*LFFFFQHTFLI Trigger: TATCAAAAACGTATGCTGGAAGAAGAAGAAGAGCCACCGAAGTGGGACTTTATTCATATGATTCAGATGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
||
| CDS CCA 72 bp | ACTTGGCTCAACAACTTCATTGTTAATACAGATTCCTaGGTATTGAGCCTGGACTTTGGAAAGAATTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TWLNNFIVNTDS*VLSLDFGKNLK Trigger: CTTCAAATTCTTTCCAAAGTCCAGGCTCAATACCCAGGAATCTGTATTAACAATGAAGTTGTTGAGCCAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
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| CDS CAA 72 bp | CTCAACAACTTCATTGTTAATACAGATTCCTGGGTATaGAGCCTGGACTTTGGAAAGAATTTGAAGGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LNNFIVNTDSWV*SLDFGKNLKVN Trigger: GTTGACCTTCAAATTCTTTCCAAAGTCCAGGCTCAATACCCAGGAATCTGTATTAACAATGAAGTTGTTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
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| CDS TCA 72 bp | ACCTTCCCCTCTTTCTTAACACTAAATTCAGGCTCTTaGAGATCTTTCATAATTTCTGCTTTGAGATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TFPSFLTLNSGS*RSFIISALRSS Trigger: ACTGGATCTCAAAGCAGAAATTATGAAAGATCTTCAAGAGCCTGAATTTAGTGTTAAGAAAGAGGGGAAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
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| CDS CAA 90 bp | ATTAAAAAGTACCTTCCCCTCTTTCTTAACACTAAATTCAGGCTCTaGAAGATCTTTCATAATTTCTGCTTTGAGATCCAGTGGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: IKKYLPLFLNTKFRL*KIFHNFCFEIQWCC Trigger: ACAGCACCACTGGATCTCAAAGCAGAAATTATGAAAGATCTTCAAGAGCCTGAATTTAGTGTTAAGAAAGAGGGGAAGGTACTTTTTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
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| CDS GCA 72 bp | AAGATCTTTCATAATTTCTGCTTTGAGATCCAGTGGTaGTGTTTTGCTAAAGTTACAGGTTTCTGTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: KIFHNFCFEIQW*CFAKVTGFCQK Trigger: TTTTTGACAGAAACCTGTAACTTTAGCAAAACAGCACCACTGGATCTCAAAGCAGAAATTATGAAAGATCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051416.12 ENSMUST00000114497.2 ENSMUST00000114498.8 |
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