Pregenerated sensors for HNF4G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017688Ensembl transcript IDs: ENSMUST00000108393.8, ENSMUST00000108394.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATGTGGTTCAGGCACAGTaGAGGAACAGTTGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYVVQAQ*RNSWKQ Trigger: TTGTTTCCAACTGTTCCTGCACTGTGCCTGAACCAC...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| 3UTR-3UTR CCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATGAAGTCATATATAAGTaGTTCAGGCACAGTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYEVIYK*FRHSAG Trigger: TCCTGCACTGTGCCTGAACCACTTATATATGACTTC...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTCAGTGCAGGAACAGTTaGAAACAATACACTTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LLASAVPDVFSITEIFYSQCRNS*KQYTSN Trigger: GTTTGAAGTGTATTGTTTCCAACTGTTCCTGCACTG...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGCCTGAAGTAGACAAAAGTATCATCTTGAGATATTTGAAGACAAATGTGTTCACATTTATGCAGTaGTATTCAGAAGGAAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: ALPEVDKSIILRYLKTNVFTFMQ*YSEGSP Trigger: GGGGCTTCCTTCTGAATAGCACTGCATAAATGTGAA...CACATTTGTCTTCAAATATCTCAAGATGATACTTTTGTCTACTTCAGGCAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| 3UTR-3UTR GCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCTGTGTTTCACATTTATaGAGTGCTATTCAGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KRSSILFFSRSLEVQSYCCVSHL*SAIQKE Trigger: TTCCTTCTGAATAGCACTGCATAAATGTGAAACACA...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTGCCATATTTGCATATCTTGAACTAACACAGGTTACTCTAGAAAGACTCTGTGTTTCACATTTATaGAGTGCTATTCAGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSAIFAYLELTQVTLERLCVSHL*SAIQKE Trigger: TTCCTTCTGAATAGCACTGCATAAATGTGAAACACA...GAGTCTTTCTAGAGTAACCTGTGTTAGTTCAAGATATGCAAATATGGCAGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTGCCATATTTGCATATCTTGAACTAACACAGGTTACTCTAGAAAGACTCCTGTCATCTTTACAATaGTGCTGTTTCTCTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: LSAIFAYLELTQVTLERLLSSLQ*CCFSEF Trigger: AAATTCAGAGAAACAGCACCATTGTAAAGATGACAG...GAGTCTTTCTAGAGTAACCTGTGTTAGTTCAAGATATGCAAATATGGCAGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| 3UTR-3UTR CAA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATACAGTGCAGGAACAGTaGGAAACAATACACTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYTVQEQ*ETIHFK Trigger: TTTGAAGTGTATTGTTTCCAACTGTTCCTGCACTGT...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGTGCAGGAACAGTaGGAAACAATACACTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LLASAVPDVFSITEIFYSTVQEQ*ETIHFK Trigger: TTTGAAGTGTATTGTTTCCAACTGTTCCTGCACTGT...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| 3UTR TCA 72 bp | CCAAGGAACTGGGTATGGGGACACACTAAGTTCCAATaGATGGGTGATTTTCCAGATTTCTCAACAGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PRNWVWGHTKFQ*MGDFPDFSTVK Trigger: TTTTACTGTTGAGAAATCTGGAAAATCACCCATTCATTGGAACTTAGTGTGTCCCCATACCCAGTTCCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| 3UTR TCA 72 bp | GATTCCCAGCATCCTTTCTGCCATATTTGCATATCTTaGACTAACACAGGTTACTCTAGAAAGACTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: DSQHPFCHICIS*TNTGYSRKTPL Trigger: CAAAGGAGTCTTTCTAGAGTAACCTGTGTTAGTTCAAGATATGCAAATATGGCAGAAAGGATGCTGGGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATACTGGGGCTTGGGACTaGAATCTGGCAAGACCTCAC | + |
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Preference number: 4 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYTGAWD*NLARPH Trigger: GTGAGGTCTTGCCAGATTTCAGTCCCAAGCCCCAGT...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACTGGGGCTTGGGACTaGAATCTGGCAAGACCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LLASAVPDVFSITEIFYSTGAWD*NLARPH Trigger: GTGAGGTCTTGCCAGATTTCAGTCCCAAGCCCCAGT...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATGCAGCTCTCCAAACCTaGCACGAGAGTCATACTGCC | + |
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Preference number: 4 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYAALQT*HESHTA Trigger: GGCAGTATGACTCTCGTGGCAGGTTTGGAGAGCTGC...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTGTGCCAGAGTGTTTATaGAGGGGATGTTGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLASAVPDVFSITEIFYSVPECL*RGCCCP Trigger: AGGGCAGCAACATCCCCTCCATAAACACTCTGGCAC...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTTATGGAGGGGATGTTaGTGCCCTCGTAGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYLWRGC*CPRRYF Trigger: GAAGTACCTACGAGGGCAGCAACATCCCCTCCATAA...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCCTCACTTCCGCTTGTaGCAGAGTGTTTATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLPHFRL*QSVYGG Trigger: CCCTCCATAAACACTCTGGCACAAGCGGAAGTGAGG...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTGCAGCTCTCCAAACCTaGCACGAGAGTCATACTGCC | + |
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Preference number: 4 (lower is better) Translates to: QSLMYSPSQKYSILQPLLAALQT*HESHTA Trigger: GGCAGTATGACTCTCGTGGCAGGTTTGGAGAGCTGC...AAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTGCAGCCATCACAACTaGATGCCCCATAGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYCSHHN*MPHSAF Trigger: GAAAGCACTATGGGGCATCCAGTTGTGATGGCTGCA...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTGTCAGTGCTGGAACTaGGGCTTGGGACTGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYCQCWN*GLGLKS Trigger: AGATTTCAGTCCCAAGCCCCAGTTCCAGCACTGACA...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTTGTTGGCTACACGACTaGCTTCAACTTCACAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLASAVPDVFSITEIFYSCWLHD*LQLHSC Trigger: ACAGCTGTGAAGTTGAAGTCAGTCGTGTAGCCAACA...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGGCCATCACAACTGGATaGCCCATAGTGCTTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLAITTG*PIVLSC Trigger: ACAGGAAAGCACTATGGGGCATCCAGTTGTGATGGC...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTCCTCACTTCCGCTTGTaGCAGAGTGTTTATGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SAVPDVFSITEIFYSTATPHFRL*QSVYGG Trigger: CCCTCCATAAACACTCTGGCACAAGCGGAAGTGAGG...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTCTCAAGAGGGCCACCTaGTCATCCAAGGGCAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PDVFSITEIFYSTATAYPLKRAT*SSKGSS Trigger: TGAACTGCCCTTGGATGACCAGGTGGCCCTCTTGAG...AGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTCCGAATGCTGCGCCTaGAAAAGCCTTTGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PDVFSITEIFYSTATAYPSECCA*KSLCSH Trigger: ATGGCTGCAAAGGCTTTTTCAGGCGCAGCATTCGGA...AGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGACAAATGTGTTTCACATTTATGCAGTGCTATTCAGAAGGAAGCCCCATTCCGAATGCTGCGCCTaGAAAAGCCTTTGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LKTNVFHIYAVLFRRKPHSECCA*KSLCSH Trigger: ATGGCTGCAAAGGCTTTTTCAGGCGCAGCATTCGGA...ATGGGGCTTCCTTCTGAATAGCACTGCATAAATGTGAAACACATTTGTCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGTGTTGGCTACACGACTaGCTTCAACTTCACAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLCWLHD*LQLHSC Trigger: ACAGCTGTGAAGTTGAAGTCAGTCGTGTAGCCAACA...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGTCCAGTATCGGCTCTaGAACCCTCATCATCGATTG | + |
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Preference number: 4 (lower is better) Translates to: SAVPDVFSITEIFYSTATVQYRL*NPHHRL Trigger: CAATCGATGATGAGGGTTTCAGAGCCGATACTGGAC...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGATAGTGCTTTCCTGTTaGTCTGTCACCACAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLIVLSC*SVTTDG Trigger: GCCATCTGTGGTGACAGAGCAACAGGAAAGCACTAT...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTTTATGGAGGGGATGTTaGTGCCCTCGTAGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: QSLMYSPSQKYSILQPLLLWRGC*CPRRYF Trigger: GAAGTACCTACGAGGGCAGCAACATCCCCTCCATAA...AAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGTGGGGTCTCTGGAGTTaGAATCTGGTCTGTATGAAC | + |
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Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLWGLWS*NLVCMN Trigger: GTTCATACAGACCAGATTGCAACTCCAGAGACCCCA...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTTGCAGCCATCACAACTaGATGCCCCATAGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SAVPDVFSITEIFYSTATCSHHN*MPHSAF Trigger: GAAAGCACTATGGGGCATCCAGTTGTGATGGCTGCA...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCCTCAAGAGGGCCACCTaGTCATCCAAGGGCAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCLKRAT*SSKGSS Trigger: TGAACTGCCCTTGGATGACCAGGTGGCCCTCTTGAG...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTTCTATCTGGATCTCTTaGAAGGGTCTAACCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LLASAVPDVFSITEIFYSSIWIS*KGLTSS Trigger: TGAGCTGGTTAGACCCTTCCAAGAGATCCAGATAGA...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATAAGCTGATCTGCACCTaGAACCGCATGTTCTTAATC | + |
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Preference number: 4 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYKLICT*NRMFLI Trigger: GATTAAGAACATGCGGTTCCAGGTGCAGATCAGCTT...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTCATACTTGTGGTCTCTaGGGCAGAACTGTCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: QSLMYSPSQKYSILQPLLHTCGL*GRTVIG Trigger: CCCAATGACAGTTCTGCCCCAGAGACCACAAGTATG...AAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CTTTCTGCCATATTTGCATATCTTGAACTAACACAGGTTACTCTAGAAAGACTCGTGCCAGAGTGTTTATaGAGGGGATGTTGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LSAIFAYLELTQVTLERLVPECL*RGCCCP Trigger: AGGGCAGCAACATCCCCTCCATAAACACTCTGGCAC...GAGTCTTTCTAGAGTAACCTGTGTTAGTTCAAGATATGCAAATATGGCAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTTATTTATGTCAGTGCTaGAACTGGGGCTTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: QSLMYSPSQKYSILQPLLYLCQC*NWGLGL Trigger: CAGTCCCAAGCCCCAGTTCCAGCACTGACATAAATA...AAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTTGGCACATAAACAGTTaGCACCACTGTCTGTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SAVPDVFSITEIFYSTATWHINS*HHCLWY Trigger: ATACCACAGACAGTGGTGTCAACTGTTTATGTGCCA...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGGGGATTGATGTGAAATaGCTGAAGCTTGATTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLGIDVK*LKLDLQ Trigger: CTGCAAATCAAGCTTCAGTCATTTCACATCAATCCC...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCGCCATCACAACTGGATaGCCCATAGTGCTTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCAITTG*PIVLSC Trigger: ACAGGAAAGCACTATGGGGCATCCAGTTGTGATGGC...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCCAACACACTGCCGACTaGACCTGCAGGAATAAACAT | + |
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Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCQHTAD*TCRNKH Trigger: ATGTTTATTCCTGCAGGTTCAGTCGGCAGTGTGTTG...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTGGGATTGATGTGAAATaGCTGAAGCTTGATTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QSLMYSPSQKYSILQPLLGIDVK*LKLDLQ Trigger: CTGCAAATCAAGCTTCAGTCATTTCACATCAATCCC...AAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGATTTGTTCAATCATCTaGCAGGTAATGCTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLICSII*QVMLCS Trigger: ACTGCAGAGCATTACCTGGCAGATGATTGAACAAAT...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCTGGGGTCTCTGGAGTTaGAATCTGGTCTGTATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCWGLWS*NLVCMN Trigger: GTTCATACAGACCAGATTGCAACTCCAGAGACCCCA...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCTATTTATGTCAGTGCTaGAACTGGGGCTTGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCYLCQC*NWGLGL Trigger: CAGTCCCAAGCCCCAGTTCCAGCACTGACATAAATA...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTAAGCTGATCTGCACCTaGAACCGCATGTTCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: PDVFSITEIFYSTATAYPKLICT*NRMFLI Trigger: GATTAAGAACATGCGGTTCCAGGTGCAGATCAGCTT...AGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCTGGCACATAAACAGTTaGCACCACTGTCTGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCWHINS*HHCLWY Trigger: ATACCACAGACAGTGGTGTCAACTGTTTATGTGCCA...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGTACTTCTTCTTGTACTaGTTCTGTCGCGTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQSLMYSPSQKYSILQPLYFFLY*FCRVHF Trigger: AAAATGAACGCGACAGAATCAGTACAAGAAGAAGTA...CAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | TGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTATAGTGCTTTCCTGTTaGTCTGTCACCACAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CILHHRNILFYSHCLSFCIVLSC*SVTTDG Trigger: GCCATCTGTGGTGACAGAGCAACAGGAAAGCACTAT...ACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | CTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTAATCTTTTGTCAACAACACACTaGCGACTGAACCTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHHRNILFYSHCLSFCNLLSTTH*RLNLQE Trigger: TTCCTGCAGGTTCAGTCGGCAGTGTGTTGTTGACAA...AAGATTACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTATTTGTTCAATCATCTaGCAGGTAATGCTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVPDVFSITEIFYSTATICSII*QVMLCS Trigger: ACTGCAGAGCATTACCTGGCAGATGATTGAACAAAT...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCTCTATCTGGATCTCTTaGAAGGGTCTAACCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCSIWIS*KGLTSS Trigger: TGAGCTGGTTAGACCCTTCCAAGAGATCCAGATAGA...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTAACAGTTTGACGAACTaGATTTGTTCAATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVPDVFSITEIFYSTATNSLTN*ICSIIC Trigger: GCAGATGATTGAACAAATTCAGTTCGTCAAACTGTT...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCTGCTTAGAGAGGGATTaGTGTGAAATGACTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCCLERD*CEMTEA Trigger: AGCTTCAGTCATTTCACATCAATCCCTCTCTAAGCA...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | TGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTTGCTTAGAGAGGGATTaGTGTGAAATGACTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CILHHRNILFYSHCLSFCCLERD*CEMTEA Trigger: AGCTTCAGTCATTTCACATCAATCCCTCTCTAAGCA...ACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTTTAATCGACAGTATCTaGATTGATTCCTTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAVPDVFSITEIFYSTATLIDSI*IDSFCP Trigger: AGGACAAAAGGAATCAATGCAGATACTGTCGATTAA...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | TGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTCAAGGTCGAGTAAGTTaGGTCCAAAACTTCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CILHHRNILFYSHCLSFCQGRVS*VQNFTV Trigger: TACAGTGAAGTTTTGGACCCAACTTACTCGACCTTG...ACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR CCA 90 bp | CTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTAATCTTGGGCAGAACTGTCATTaGGATTATACAGAATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHHRNILFYSHCLSFCNLGQNCH*DYTESA Trigger: TGCAGATTCTGTATAATCCCAATGACAGTTCTGCCC...AAGATTACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCAACAGTTTGACGAACTaGATTTGTTCAATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRSSILFFSRSLEVQSYCNSLTN*ICSIIC Trigger: GCAGATGATTGAACAAATTCAGTTCGTCAAACTGTT...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR TCA 90 bp | CTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTAATCTTTACTTCTTCTTGTACTaGTTCTGTCGCGTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHHRNILFYSHCLSFCNLYFFLY*FCRVHF Trigger: AAAATGAACGCGACAGAATCAGTACAAGAAGAAGTA...AAGATTACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR GCA 90 bp | GCCTTGCCTGAAGTAGACAAAAGTATCATCTTGAGATATTTGAAGACAAATGTGTTAATCGACAGTATCTaGATTGATTCCTTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPEVDKSIILRYLKTNVLIDSI*IDSFCP Trigger: AGGACAAAAGGAATCAATGCAGATACTGTCGATTAA...CACATTTGTCTTCAAATATCTCAAGATGATACTTTTGTCTACTTCAGGCAAGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS CCA 90 bp | ATGGCCTTCAAGCACGCGTACTCGTTGTCATCTATCTGGATCTCTTaGAAGGGTCTAACCAGCTCATCGAGAACTCTGTTGGCTACACGA | + |
|
Preference number: 5 (lower is better) Translates to: MAFKHAYSLSSIWIS*KGLTSSSRTLLATR Trigger: TCGTGTAGCCAACAGAGTTCTCGATGAGCTGGTTAGACCCTTCCAAGAGATCCAGATAGATGACAACGAGTACGCGTGCTTGAAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS CCA 90 bp | AAAAACACAATGGCCTTCAAGCACGCGTACTCGTTGTCATCTATCTaGATCTCTTGGAAGGGTCTAACCAGCTCATCGAGAACTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KNTMAFKHAYSLSSI*ISWKGLTSSSRTLL Trigger: CAACAGAGTTCTCGATGAGCTGGTTAGACCCTTCCAAGAGATCCAGATAGATGACAACGAGTACGCGTGCTTGAAGGCCATTGTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | TTGAAGACAAATGTGTTTCACATTTATGCAGTGCTATTCAGAAGGAAGCCCCATTGCTGGAACTGGGGCTaGGGACTGAAATCTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKTNVFHIYAVLFRRKPHCWNWG*GLKSGK Trigger: CTTGCCAGATTTCAGTCCCAAGCCCCAGTTCCAGCA...ATGGGGCTTCCTTCTGAATAGCACTGCATAAATGTGAAACACATTTGTCTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CACATTTACTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATAATTTTGTACGGTTCTaGTCCAGAGCCTTGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HIYCWPQQSLMYSPSQKYNFVRF*SRALWW Trigger: CCACCACAAGGCTCTGGACAAGAACCGTACAAAATT...ATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAGTAAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTCGCCTGAAAAAGCCTTaGCAGCCATCACAACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSLMYSPSQKYSILQPLLRLKKP*QPSQLD Trigger: ATCCAGTTGTGATGGCTGCAAAGGCTTTTTCAGGCG...AAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTAGGAGGTTGTCAATTTaGACCATGCCGAACAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLASAVPDVFSITEIFYSRRLSI*TMPNSL Trigger: CAAACTGTTCGGCATGGTCAAAATTGACAACCTCCT...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTCGCCTGAAAAAGCCTTaGCAGCCATCACAACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PDVFSITEIFYSTATAYPRLKKP*QPSQLD Trigger: ATCCAGTTGTGATGGCTGCAAAGGCTTTTTCAGGCG...AGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTAATCTTTGCTGGAACTGGGGCTaGGGACTGAAATCTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHHRNILFYSHCLSFCNLCWNWG*GLKSGK Trigger: CTTGCCAGATTTCAGTCCCAAGCCCCAGTTCCAGCA...AAGATTACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGGGGCAGAACTGTCATaGGGATTATACAGAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAVPDVFSITEIFYSTATGAELS*GLYRIC Trigger: GCAGATTCTGTATAATCCCAATGACAGTTCTGCCCC...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CTGCTGGCCTCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTTTTGACGAACTGAATTaGTTCAATCATCTGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLASAVPDVFSITEIFYSFDELN*FNHLPG Trigger: ACCTGGCAGATGATTGAACAAATTCAGTTCGTCAAA...AGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGAGGCCAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | TCAGCAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTAGGAGGTTGTCAATTTaGACCATGCCGAACAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAVPDVFSITEIFYSTATRRLSI*TMPNSL Trigger: CAAACTGTTCGGCATGGTCAAAATTGACAACCTCCT...AGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTATGGCACATAAACAGTaGACACCACTGTCTGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PDVFSITEIFYSTATAYPMAHKQ*TPLSVV Trigger: TACCACAGACAGTGGTGTCAACTGTTTATGTGCCAT...AGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CAGTCCCTGATGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTTCGACAGTATCTGCATaGATTCCTTTTGTCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QSLMYSPSQKYSILQPLLSTVSA*IPFVLV Trigger: GACAAGGACAAAAGGAATCAATGCAGATACTGTCGA...AAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACATCAGGGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCAATTTTGTACGGTTCTaGTCCAGAGCCTTGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRSSILFFSRSLEVQSYCNFVRF*SRALWW Trigger: CCACCACAAGGCTCTGGACAAGAACCGTACAAAATT...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | CTTTCTGCCATATTTGCATATCTTGAACTAACACAGGTTACTCTAGAAAGACTCCCAAGGTCGAGTAAGTaGGGTCCAAAACTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSAIFAYLELTQVTLERLPRSSK*GPKLHC Trigger: ACAGTGAAGTTTTGGACCCAACTTACTCGACCTTGG...GAGTCTTTCTAGAGTAACCTGTGTTAGTTCAAGATATGCAAATATGGCAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | TGTATTCTCCATCACAGAAATATTCTATTCTACAGCCACTGCTTATCCTTTTGTATGGCACATAAACAGTaGACACCACTGTCTGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CILHHRNILFYSHCLSFCMAHKQ*TPLSVV Trigger: TACCACAGACAGTGGTGTCAACTGTTTATGTGCCAT...ACAAAAGGATAAGCAGTGGCTGTAGAATAGAATATTTCTGTGATGGAGAATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS-3UTR CAA 90 bp | AAAAGAAGCAGCATACTTTTCTTTAGCAGATCTCTTGAAGTGCAGTCATATTGCTTTGACGAACTGAATTaGTTCAATCATCTGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KRSSILFFSRSLEVQSYCFDELN*FNHLPG Trigger: ACCTGGCAGATGATTGAACAAATTCAGTTCGTCAAA...GCAATATGACTGCACTTCAAGAGATCTGCTAAAGAAAAGTATGCTGCTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS CAA 90 bp | AATGGCCTTCAAGCACGCGTACTCGTTGTCATCTATCTGGATCTCTaGGAAGGGTCTAACCAGCTCATCGAGAACTCTGTTGGCTACACG | + |
|
Preference number: 6 (lower is better) Translates to: NGLQARVLVVIYLDL*EGSNQLIENSVGYT Trigger: CGTGTAGCCAACAGAGTTCTCGATGAGCTGGTTAGACCCTTCCAAGAGATCCAGATAGATGACAACGAGTACGCGTGCTTGAAGGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS CCA 72 bp | ATGGCCTTCAAGCACGCGTACTCGTTGTCATCTATCTaGATCTCTTGGAAGGGTCTAACCAGCTCATCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MAFKHAYSLSSI*ISWKGLTSSSR Trigger: TCTCGATGAGCTGGTTAGACCCTTCCAAGAGATCCAGATAGATGACAACGAGTACGCGTGCTTGAAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS CCA 72 bp | AAGCACGCGTACTCGTTGTCATCTATCTGGATCTCTTaGAAGGGTCTAACCAGCTCATCGAGAACTCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KHAYSLSSIWIS*KGLTSSSRTLL Trigger: CAACAGAGTTCTCGATGAGCTGGTTAGACCCTTCCAAGAGATCCAGATAGATGACAACGAGTACGCGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS CAA 72 bp | CCTGTTGCTCTGTCACCACAGATGGCACATAAACAGTaGACACCACTGTCTGTGGTATTCATACTTGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PVALSPQMAHKQ*TPLSVVFILVV Trigger: GACCACAAGTATGAATACCACAGACAGTGGTGTCAACTGTTTATGTGCCATCTGTGGTGACAGAGCAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
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| CDS TCA 72 bp | CTGTTGCTCTGTCACCACAGATGGCACATAAACAGTTaGCACCACTGTCTGTGGTATTCATACTTGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLCHHRWHINS*HHCLWYSYLWS Trigger: AGACCACAAGTATGAATACCACAGACAGTGGTGTCAACTGTTTATGTGCCATCTGTGGTGACAGAGCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
||
| CDS TCA 72 bp | GGATGTTGCTGCCCTCGTAGGTACTTCTTCTTGTACTaGTTCTGTCGCGTTCATTTTGCACCGCTTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GCCCPRRYFFLY*FCRVHFAPLLF Trigger: AAAAAGAAGCGGTGCAAAATGAACGCGACAGAATCAGTACAAGAAGAAGTACCTACGAGGGCAGCAACATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108393.8 ENSMUST00000108394.3 |
||
| CDS CCA 72 bp | GACACCACTGTCTGTGGTATTCATACTTGTGGTCTCTaGGGCAGAACTGTCATTGGGATTATACAGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: DTTVCGIHTCGL*GRTVIGIIQNL Trigger: CAGATTCTGTATAATCCCAATGACAGTTCTGCCCCAGAGACCACAAGTATGAATACCACAGACAGTGGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
||
| CDS CCA 72 bp | AATCTGCATAGTGTCAAACTCCAAGGTCGAGTAAGTTaGGTCCAAAACTTCACTGTAGTTTCCCATGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NLHSVKLQGRVS*VQNFTVVSHVH Trigger: ATGGACATGGGAAACTACAGTGAAGTTTTGGACCCAACTTACTCGACCTTGGAGTTTGACACTATGCAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108394.3 |
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