Pregenerated sensors for HNF4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017950Ensembl transcript IDs: ENSMUST00000018094.13, ENSMUST00000109411.8, ENSMUST00000137449.2, ENSMUST00000143911.8
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTTCAACTTGAGAGGAGTCCAGGCAGTGGAAGACAGTCCTCCCTaGGGTCTTCTCAAGCAAAGCCCCGCCCTCCAGATGCGGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: DFNLRGVQAVEDSPP*GLLKQSPALQMRGQ Trigger: CTGACCCCGCATCTGGAGGGCGGGGCTTTGCTTGAGAAGACCCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTCTCAAGTTGAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR TCA 90 bp | GTGCTGGAGGCAGGAGTTGTAGCGATATTGGCAGAGGAGGGATGGTaGCTCCTACCCTCTGCCTTACCCAGGTCAGTGCTTACAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: VLEAGVVAILAEEGW*LLPSALPRSVLTEG Trigger: GCCTTCTGTAAGCACTGACCTGGGTAAGGCAGAGGGTAGGAGTCACCATCCCTCCTCTGCCAATATCGCTACAACTCCTGCCTCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR GCA 90 bp | GACAAAGATTGGGAAAGACAAGGACCAGAGAGAGTTCAGCTCTCCTaGCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: DKDWERQGPERVQLS*LHAGQSEPSGWGLW Trigger: CCAGAGACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTCTCTCTGGTCCTTGTCTTTCCCAATCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR GCA 90 bp | GGGTTTCTCCTTCAGAAAGGACTGATTGGGACAGTGGCTGACCCCTaGCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCC | + |
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Preference number: 1 (lower is better) Translates to: GFLLQKGLIGTVADP*PRRLLPLKANITYS Trigger: GGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTCAGCCACTGTCCCAATCAGTCCTTTCTGAAGGAGAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR GCA 90 bp | TTCTTATCCTTCTCCTGCCCCTCTCCCAAACTCCTGAGCCTTGACTaGCAGACTAGACTGATCCGTCTTCTAGGAATCACTCCCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FLSFSCPSPKLLSLD*QTRLIRLLGITPCC Trigger: GCAGCAGGGAGTGATTCCTAGAAGACGGATCAGTCTAGTCTGGCAGTCAAGGCTCAGGAGTTTGGGAGAGGGGCAGGAGAAGGATAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR TCA 90 bp | ACGTCTGCTTCTGACCCTCTCCTGTCTATTCTCAGGGGAGCCTCCTaGACCCTGAAAGGTTCTGAGAACTCCATGAAGAAAAGAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TSASDPLLSILRGAS*TLKGSENSMKKRGC Trigger: GCAGCCTCTTTTCTTCATGGAGTTCTCAGAACCTTTCAGGGTTCAGGAGGCTCCCCTGAGAATAGACAGGAGAGGGTCAGAAGCAGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR CCA 90 bp | ACCCTGAAAGGTTCTGAGAACTCCATGAAGAAAAGAGGCTGCTCTTaGTGGAAAACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: TLKGSENSMKKRGCS*WKTVAPSSVHHQLV Trigger: TACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGTTTTCCACCAAGAGCAGCCTCTTTTCTTCATGGAGTTCTCAGAACCTTTCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR CCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTaGTTTGTGTCACCTGCTCTGCTAGCCAGAAGCCTACCTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: FYLPMGLCPGCSPIN*FVSPALLARSLPSL Trigger: CAGGGAAGGTAGGCTTCTGGCTAGCAGAGCAGGTGACACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR CCA 90 bp | GGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTaGCAGGCCCCGGGAGGACTCGGATCCATCCCTTTATCTCATCCC | + |
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Preference number: 1 (lower is better) Translates to: GCLMPYNIIWKYGKA*QAPGGLGSIPLSHP Trigger: GGGATGAGATAAAGGGATGGATCCGAGTCCTCCCGGGGCCTGCCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR CCA 90 bp | CTGAAAGGTTCTGAGAACTCCATGAAGAAAAGAGGCTGCTCTTGGTaGAAAACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTT | + |
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Preference number: 1 (lower is better) Translates to: LKGSENSMKKRGCSW*KTVAPSSVHHQLVL Trigger: AAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGTTTTCCACCAAGAGCAGCCTCTTTTCTTCATGGAGTTCTCAGAACCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR TCA 90 bp | AGTGCTTCCTGTGAGTCAGTTAAGATCCTCTACGTATATCTTCCTTaGCAATGTCTGGGTTACAGGGAAGGTTCTATGCGATGGTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SASCESVKILYVYLP*QCLGYREGSMRWWL Trigger: CAGCCACCATCGCATAGAACCTTCCCTGTAACCCAGACATTGTCAAGGAAGATATACGTAGAGGATCTTAACTGACTCACAGGAAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCGAGGAGTCCAGGCAGTaGAAGACAGTCCTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVEESRQ*KTVLPG Trigger: CCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTC...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR CAA 90 bp | CAGGAGAGGAGTACTATAAGGCAAGCTGACCCAGCCTCAGAAAGTTaGTTTCCAGGCCCCCTGACCAGCACCAGGAAGGAAGAGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: QERSTIRQADPASES*FPGPLTSTRKEEAP Trigger: GGGGGCCTCTTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCTGGGTCAGCTTGCCTTATAGTACTCCTCTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGTCGATGCTTTCCCAATaGCGGCCACCCACTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TVAPSSVHHQLVLGPVISSMLSQ*RPPTLH Trigger: GTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGA...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCCCTCTCCCAAACTCCTaGGCCTTGACTGCCAGACTA | + |
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Preference number: 2 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVPLPNS*ALTARL Trigger: TAGTCTGGCAGTCAAGGCTCAGGAGTTTGGGAGAGG...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTGCAGAGGAGGGATGGTaGCTCCTACCCTCTGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: DPCPRRLLPLKANITYSSAEEGW*LLPSAL Trigger: TAAGGCAGAGGGTAGGAGTCACCATCCCTCCTCTGC...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATTGTTTCCAGGCCCCCTaGCCAGCACCAGGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYCFQAP*PAPGRK Trigger: CTTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACA...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCAGAAGGCTCTCAGAATaGGTGGGGAAATGGTTACCA | + |
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Preference number: 2 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVRRLSE*VGKWLP Trigger: TGGTAACCATTTCCCCACTCATTCTGAGAGCCTTCT...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTGCTGTATTCATCTTCTaGCAGCCCCACACTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: DPCPRRLLPLKANITYSSAVFIF*QPHTAA Trigger: AGCTGCAGTGTGGGGCTGTCAGAAGATGAATACAGC...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGCTGTCAAGGGACAGATaGAAAGCTCGCCTCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: TVAPSSVHHQLVLGPVISLSRDR*KARLFL Trigger: GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAG...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATGAGGAGTCCAGGCAGTaGAAGACAGTCCTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYEESRQ*KTVLPG Trigger: CCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTC...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCATCGACACCCTTGGGTaGTTCTCTACTGTAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVIDTLG*FSTVES Trigger: GCTTTCTACAGTAGAGAACCACCCAAGGGTGTCGAT...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATGCAGAGGAGGGATGGTaGCTCCTACCCTCTGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYAEEGW*LLPSAL Trigger: TAAGGCAGAGGGTAGGAGTCACCATCCCTCCTCTGC...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTTCCTCTTGTTCCCATTaGCTAGTGACACTTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DPCPRRLLPLKANITYSSSSCSH*LVTLCR Trigger: CCTGCAAAGTGTCACTAGTCAATGGGAACAAGAGGA...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATCACCCTTTCTGTAGCTaGTCTGGGACTGGTCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNHPFCS*SGTGPS Trigger: CGAGGGACCAGTCCCAGAGCAGCTACAGAAAGGGTG...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACCTGGTTTGTGTCACCTaGTCTGCTAGCCAGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHLVCVT*SASQKP Trigger: AGGCTTCTGGCTAGCAGAGCAGGTGACACAAACCAG...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCTGTTCTCCAATAAACTaGTTTGTGTCACCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVCSPIN*FVSPAL Trigger: CAGAGCAGGTGACACAAACCAGTTTATTGGAGAACA...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCGAAGGTTCTATGCGATaGTGGCTGTTTAATGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVEGSMR*WLFNAL Trigger: TAAGGCATTAAACAGCCACCATCGCATAGAACCTTC...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCTCATATCCTACCTCTaGGGGATGCTGTATTCATCT | + |
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Preference number: 2 (lower is better) Translates to: DPCPRRLLPLKANITYSSLISYL*GMLYSS Trigger: AGATGAATACAGCATCCCGCAGAGGTAGGATATGAG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCGACAGTCCTGTTGTGTaGGGGTTCTTTTTCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVDSPVV*GFFFFN Trigger: ATTAAAGAAAAAGAACCCCCACACAACAGGACTGTC...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGTCCCAGGTGCTCTTCTaGGGGTATGAGCCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: STSFSEDLSFRLEFLDTGSQVLF*GYEPAE Trigger: TTCTGCTGGCTCATACCCTCAGAAGAGCACCTGGGA...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGCCTCTCCCAAACTCCTaGGCCTTGACTGCCAGACTA | + |
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Preference number: 2 (lower is better) Translates to: STSFSEDLSFRLEFLDTGPLPNS*ALTARL Trigger: TAGTCTGGCAGTCAAGGCTCAGGAGTTTGGGAGAGG...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACCAGTTTGTCATTCAATaGTCCCCAGTGTGTACCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHQFVIQ*SPVCTL Trigger: CAGGGTACACACTGGGGACCATTGAATGACAAACTG...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTTTTTCTTTAATCAGCTaGCCCCATTACTCCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: DPCPRRLLPLKANITYSSFSLIS*PHYSSA Trigger: TGCTGAGGAGTAATGGGGCCAGCTGATTAAAGAAAA...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGGACAGTCCTGTTGTGTaGGGGTTCTTTTTCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: TVAPSSVHHQLVLGPVISDSPVV*GFFFFN Trigger: ATTAAAGAAAAAGAACCCCCACACAACAGGACTGTC...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR CAA 90 bp | CCCAGTGTGTACCCTGTCACAACTCCATGGGAACTGATTTCTTCATaGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PSVYPVTTPWELISS*PPSHTILPTYGPLS Trigger: GGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCAATGAAGAAATCAGTTCCCATGGAGTTGTGACAGGGTACACACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR CAA 90 bp | GGTGGAAAACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTaGGTCCCGTCATATCGTGTACTAGAAACAAAGCTCAGAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GGKLWHPALSTTSLY*VPSYRVLETKLRRK Trigger: TTTTCTTCTGAGCTTTGTTTCTAGTACACGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGTTTTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGTCGCCTCTTTCTCGATaGTTTCCCAATGACGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: STSFSEDLSFRLEFLDTGSPLSR*FPNDGH Trigger: GTGGCCGTCATTGGGAAAGCATCGAGAAAGAGGCGA...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATTTCTTATCCTTCTCCTaGCCCTCTCCCAAACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNFLSFS*PSPKLL Trigger: CAGGAGTTTGGGAGAGGGGCAGGAGAAGGATAAGAA...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR TCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATTCCTCTTGTTCCCATTaGCTAGTGACACTTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNSSCSH*LVTLCR Trigger: CCTGCAAAGTGTCACTAGTCAATGGGAACAAGAGGA...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGCACCCTTTCTGTAGCTaGTCTGGGACTGGTCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWHPFCS*SGTGPS Trigger: CGAGGGACCAGTCCCAGAGCAGCTACAGAAAGGGTG...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGAGGTCCTGCAACATCTaGAGACAGTCGTCCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: FYLPMGLCPGCSPINWFVRSCNI*RQSSFR Trigger: CCTGAAGGACGACTGTCTGCAGATGTTGCAGGACCT...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGGGCTCTCAGAATGAGTaGGGAAATGGTTACCACAGC | + |
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Preference number: 2 (lower is better) Translates to: STSFSEDLSFRLEFLDTGGSQNE*GNGYHS Trigger: GCTGTGGTAACCATTTCCCCACTCATTCTGAGAGCC...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| 3UTR-3UTR GCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATCTCATATCCTACCTCTaGGGGATGCTGTATTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNLISYL*GMLYSS Trigger: AGATGAATACAGCATCCCGCAGAGGTAGGATATGAG...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATAACCCTGAAAGGTTCTaGGAACTCCATGAAGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNNPERF*ELHEEK Trigger: CTTTTCTTCATGGAGTTCTCAGAACCTTTCAGGGTT...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGAGGTCCTGCAACATCTaGAGACAGTCGTCCTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWRSCNI*RQSSFR Trigger: CCTGAAGGACGACTGTCTGCAGATGTTGCAGGACCT...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGATCGACACCCTTGGGTaGTTCTCTACTGTAGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FYLPMGLCPGCSPINWFVIDTLG*FSTVES Trigger: GCTTTCTACAGTAGAGAACCACCCAAGGGTGTCGAT...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATTGTTCTCCAATAAACTaGTTTGTGTCACCTGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNCSPIN*FVSPAL Trigger: CAGAGCAGGTGACACAAACCAGTTTATTGGAGAACA...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATAGTAAACGAGATTCTTaGCTTCCAGTGGACTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNSKRDS*LPVDFR Trigger: TCTAAAGTCCACTGGAAGTCAAGAATCTCGTTTACT...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGCCAGCCTCAGAAAGTTaGTTTCCAGGCCCCCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: TVAPSSVHHQLVLGPVISPASES*FPGPLT Trigger: GGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCTGG...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | CAGTGGCTGACCCCTGCCCCAGAAGACTGCTACCACTaGAGGCCAACATTACCTACTCCTCTCCTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QWLTPAPEDCYH*RPTLPTPLLMP Trigger: TGGCATCAGGAGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTCAGCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAGCCCCACACTGCAGCTACCCCTGACCTCAGTTTGTCATTCAATGGTCCCCCCTACCTATGGGCCTTaGTCCAGGCTGTTCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: DSPTLQLPLTSVCHSMVPPTYGP*SRLFSN Trigger: ATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGG...GGGGACCATTGAATGACAAACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCTCCCAGAATGCACCTaGACTGTAGCTTCCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DPCPRRLLPLKANITYSSLPECT*TVASQA Trigger: TGCCTGGGAAGCTACAGTCAAGGTGCATTCTGGGAG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | GCAGGAGTTGTAGCGATATTGGCAGAGGAGGGATGGTaGCTCCTACCCTCTGCCTTACCCAGGTCAGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGVVAILAEEGW*LLPSALPRSVL Trigger: AAGCACTGACCTGGGTAAGGCAGAGGGTAGGAGTCACCATCCCTCCTCTGCCAATATCGCTACAACTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | GTTTCTCCTTCAGAAAGGACTGATTGGGACAGTGGCTaGCCCCTGCCCCAGAAGACTGCTACCACTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VSPSERTDWDSG*PLPQKTATTEG Trigger: GCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTCAGCCACTGTCCCAATCAGTCCTTTCTGAAGGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | GCACACGGTTTTGGGGCCTCACACCCTTTCTGTAGCTaGTCTGGGACTGGTCCCTCGTGTCACATCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AHGFGASHPFCS*SGTGPSCHIFF Trigger: AAAGAAGATGTGACACGAGGGACCAGTCCCAGAGCAGCTACAGAAAGGGTGTGAGGCCCCAAAACCGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | TGGGAAAGACAAGGACCAGAGAGAGTTCAGCTCTCCTaGCTTCATGCAGGACAGTCTGAGCCATCTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WERQGPERVQLS*LHAGQSEPSGW Trigger: CCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTCTCTCTGGTCCTTGTCTTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGTTTAGGCTGGAATTTTaGGACACTGGGATGCTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: TVAPSSVHHQLVLGPVISFRLEF*DTGMLA Trigger: GGCGAGCATCCCAGTGTCCAAAAATTCCAGCCTAAA...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | CATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTaGCAGCCCCACACTGCAGCTACCCCTGACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HILPLRDAVFIF*QPHTAATPDLS Trigger: ACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | CACTTCCAGACCAGGGGACATTCCTCTTGTTCCCATTaGCTAGTGACACTTTGCAGGGGCTCCGCAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HFQTRGHSSCSH*LVTLCRGSAKP Trigger: TGGCTTTGCGGAGCCCCTGCAAAGTGTCACTAGTCAATGGGAACAAGAGGAATGTCCCCTGGTCTGGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | GATATTGGCAGAGGAGGGATGGTGACTCCTACCCTCTaGCTTACCCAGGTCAGTGCTTACAGAAGGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DIGRGGMVTPTL*LTQVSAYRRLS Trigger: TGAGAGCCTTCTGTAAGCACTGACCTGGGTAAGGCAGAGGGTAGGAGTCACCATCCCTCCTCTGCCAATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | GTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCGATaGTTTCCCAATGACGGCCACCCACTCTCCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: VKGQMQSSPLSR*FPNDGHPLSTF Trigger: GAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | CTTCAGAAAGGACTGATTGGGACAGTGGCTGACCCCTaGCCCAGAAGACTGCTACCACTGAAGGCCAACATT | + |
|
Preference number: 3 (lower is better) Translates to: LQKGLIGTVADP*PRRLLPLKANI Trigger: AATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTCAGCCACTGTCCCAATCAGTCCTTTCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCAGGGGACATTCCTCTaGTTCCCATTGACTAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: DPCPRRLLPLKANITYSSQGTFL*FPLTSD Trigger: GTCACTAGTCAATGGGAACAAGAGGAATGTCCCCTG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | GTTGGCATAGCAGGAGAGGAGTACTATAAGGCAAGCTaGCCCAGCCTCAGAAAGTTTGTTTCCAGGCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VGIAGEEYYKAS*PSLRKFVSRPP Trigger: AGGGGGCCTGGAAACAAACTTTCTGAGGCTGGGTCAGCTTGCCTTATAGTACTCCTCTCCTGCTATGCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | GCTACCACTGAAGGCCAACATTACCTACTCCTCTCCTaGTGCCACTGGGGATGGAGGGACAAAGATTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ATTEGQHYLLLS*CHWGWRDKDWE Trigger: TTCCCAATCTTTGTCCCTCCATCCCCAGTGGCATCAGGAGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | GATGGTGACTCCTACCCTCTGCCTTACCCAGGTCAGTaGTTACAGAAGGCTCTCAGAATGAGTGGGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: DGDSYPLPYPGQ*LQKALRMSGEM Trigger: CATTTCCCCACTCATTCTGAGAGCCTTCTGTAAGCACTGACCTGGGTAAGGCAGAGGGTAGGAGTCACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | TCCAGTATAGCCTCCTCATATCCTACCTCTGCGGGATaGTGTATTCATCTTCTGACAGCCCCACACTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSIASSYPTSAG*CIHLLTAPHCS Trigger: GCTGCAGTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGAGGCTATACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | CCTACGCTCCAGTATAGCCTCCTCATATCCTACCTCTaGGGGATGCTGTATTCATCTTCTGACAGCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: PTLQYSLLISYL*GMLYSSSDSPT Trigger: TGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGAGGCTATACTGGAGCGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | TCTGAGAACTCCATGAAGAAAAGAGGCTGCTCTTGGTaGAAAACTGTGGCACCCAGCTCTGTCCACCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SENSMKKRGCSW*KTVAPSSVHHQ Trigger: CTGGTGGTGGACAGAGCTGGGTGCCACAGTTTTCCACCAAGAGCAGCCTCTTTTCTTCATGGAGTTCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | GGTTCTGAGAACTCCATGAAGAAAAGAGGCTGCTCTTaGTGGAAAACTGTGGCACCCAGCTCTGTCCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GSENSMKKRGCS*WKTVAPSSVHH Trigger: GTGGTGGACAGAGCTGGGTGCCACAGTTTTCCACCAAGAGCAGCCTCTTTTCTTCATGGAGTTCTCAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCGAACTGATTTCTTCATaGCCTCCCTCCCATACTATT | + |
|
Preference number: 3 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVELISS*PPSHTI Trigger: AATAGTATGGGAGGGAGGCAATGAAGAAATCAGTTC...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | CCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTaGTTTGTGTCACCTGCTCTGCTAGCCAGAAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PMGLCPGCSPIN*FVSPALLARSL Trigger: TAGGCTTCTGGCTAGCAGAGCAGGTGACACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | CAGTGGACTTTAGAACGGTCTCTAGCTGGCCAGTTCTaGAGAGAGAAAGCCTCTGGGGTTGACACTGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QWTLERSLAGQF*REKASGVDTGK Trigger: TTTACCAGTGTCAACCCCAGAGGCTTTCTCTCTCCAGAACTGGCCAGCTAGAGACCGTTCTAAAGTCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | TCTGACCCTCTCCTGTCTATTCTCAGGGGAGCCTCCTaGACCCTGAAAGGTTCTGAGAACTCCATGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SDPLLSILRGAS*TLKGSENSMKK Trigger: TTTCTTCATGGAGTTCTCAGAACCTTTCAGGGTTCAGGAGGCTCCCCTGAGAATAGACAGGAGAGGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | CTGAAAGGTTCTGAGAACTCCATGAAGAAAAGAGGCTaGTCTTGGTGGAAAACTGTGGCACCCAGCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LKGSENSMKKRG*SWWKTVAPSSV Trigger: GACAGAGCTGGGTGCCACAGTTTTCCACCAAGAGCAGCCTCTTTTCTTCATGGAGTTCTCAGAACCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | ATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTaGCAGGCCCCGGGAGGACTCGGATCCATCCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: MPYNIIWKYGKA*QAPGGLGSIPL Trigger: TAAAGGGATGGATCCGAGTCCTCCCGGGGCCTGCCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | TGCGATGGTGGCTGTTTAATGCCTTATAACATCATCTaGAAGTATGGAAAAGCTTGGCAGGCCCCGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CDGGCLMPYNII*KYGKAWQAPGG Trigger: TCCTCCCGGGGCCTGCCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | TTTGGTGTGAAGGTCATGATTAGCATTTCCCAGGGTTaGCCACAGAGAGCTCTAGCAAAGGCAAGTAGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGVKVMISISQG*PQRALAKASSV Trigger: CACGCTACTTGCCTTTGCTAGAGCTCTCTGTGGCCAACCCTGGGAAATGCTAATCATGACCTTCACACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | CCCGTGATGTTTGCACAACCACAGGAAGGTGCAGATTaGTCTGATGGGACACAGCCTACTTCTGAATGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PVMFAQPQEGAD*SDGTQPTSECL Trigger: CAAACATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTGCAAACATCACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGTCAGGGGTGAAGAAGTaGAGGGAAGAAGATACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: STSFSEDLSFRLEFLDTGSGVKK*REEDTE Trigger: CTCCGTATCTTCTTCCCTCAACTTCTTCACCCCTGA...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGTCAGGGGTGAAGAAGTaGAGGGAAGAAGATACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FYLPMGLCPGCSPINWFVSGVKK*REEDTE Trigger: CTCCGTATCTTCTTCCCTCAACTTCTTCACCCCTGA...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR TCA 72 bp | TCCCCAGTGTGTACCCTGTCACAACTCCATGGGAACTaGTTTCTTCATTGCCTCCCTCCCATACTATTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SPVCTLSQLHGN*FLHCLPPILFY Trigger: GTAAAATAGTATGGGAGGGAGGCAATGAAGAAATCAGTTCCCATGGAGTTGTGACAGGGTACACACTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR GCA 72 bp | TTCCTTGACAATGTCTGGGTTACAGGGAAGGTTCTATaGGATGGTGGCTGTTTAATGCCTTATAACATCATC | + |
|
Preference number: 3 (lower is better) Translates to: FLDNVWVTGKVL*DGGCLMPYNII Trigger: GATGATGTTATAAGGCATTAAACAGCCACCATCGCATAGAACCTTCCCTGTAACCCAGACATTGTCAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CCA 72 bp | TGTTCCCTGTACTGTAATAAATTTGTTAATGTGGAATaGGTTTCTCCTTCAGAAAGGACTGATTGGGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: CSLYCNKFVNVE*VSPSERTDWDS Trigger: ACTGTCCCAATCAGTCCTTTCTGAAGGAGAAACCCATTCCACATTAACAAATTTATTACAGTACAGGGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCCCCACACTGCAGCTACCCCTGACCTCAGTTTGTCATTCAATGGTCCCCTCGGGAGTGGCTGCCTaGCCCCTGGGTCGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSPTLQLPLTSVCHSMVPSGVAA*PLGRGH Trigger: GTGGCCCCGACCCAGGGGGCAGGCAGCCACTCCCGA...GGGGACCATTGAATGACAAACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTCAGAAAGTTTGTTTCCAGGCCCCCTGACCAGCACCAGGAAGGAAGAGGCCACCGGCGTGGGCCCTaGGCAGCGCCACCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKFVSRPPDQHQEGRGHRRGP*AAPPGH Trigger: ATGACCAGGTGGCGCTGCTCAGGGCCCACGCCGGTG...GCCTCTTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCCACCGGCGTGGGCCCTaGGCAGCGCCACCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLPSLSRDRCKARLFLHRRGP*AAPPGH Trigger: ATGACCAGGTGGCGCTGCTCAGGGCCCACGCCGGTG...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTCAGAAAGTTTGTTTCCAGGCCCCCTGACCAGCACCAGGAAGGAAGAGGCCCTGCAGGAGCGCGTTaGTGGAGGGCAGGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKFVSRPPDQHQEGRGPAGAR*WRAGCC Trigger: ACAGCAGCCTGCCCTCCATCAACGCGCTCCTGCAGG...GCCTCTTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCCGTAGTGTTTGCCGGTaGCCCGGTCGCCACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVRSVCR*PGRHRW Trigger: CCATCTGTGGCGACCGGGCCACCGGCAAACACTACG...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCGTGGAGTCTCGGGAGTaGCTGCCTGCCCCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARSLPSLSRDRCKARLFLVESRE*LPAPWV Trigger: GACCCAGGGGGCAGGCAGCCACTCCCGAGACTCCAC...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTGTGGAGTCTCGGGAGTaGCTGCCTGCCCCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSVESRE*LPAPWV Trigger: GACCCAGGGGGCAGGCAGCCACTCCCGAGACTCCAC...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGCGAGCCACTTGGTGGTaGTGGCTGTGGAGTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISRATWW*WLWSLG Trigger: CCCGAGACTCCACAGCCATCACCACCAAGTGGCTCG...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCGCTCCAAGCAGCAGATaGTCACCGGCGTGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLPSLSRDRCKARLFLAPSSR*SPAWAL Trigger: CAGGGCCCACGCCGGTGAGCATCTGCTGCTTGGAGC...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCCCCACACTGCAGCTACCCCTGACCTCAGTTTGTCATTCAATGGTCCCCGTGGTGGGTGTGGGGTaGATCACTGGCAGACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSPTLQLPLTSVCHSMVPVVGVG*ITGRPS Trigger: GGAGGGTCTGCCAGTGATGCACCCCACACCCACCAC...GGGGACCATTGAATGACAAACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATTCGGGAGTGGCTGCCTaGCCCCTGGGTCGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYSGVAA*PLGRGH Trigger: GTGGCCCCGACCCAGGGGGCAGGCAGCCACTCCCGA...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGAAAGTTTGTTTCCAGGCCCCCTGACCAGCACCAGGAAGGAAGAGGCCAGGGTGGTGTAGGCTaGGTCCAGGGCAGCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLRKFVSRPPDQHQEGRGQGGVG*VQGSAV Trigger: TACAGCGCTGCCCTGGACCCAGCCTACACCACCCTG...GCCTCTTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGCAGGGTGGTGTAGGCTaGGTCCAGGGCAGCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISQGGVG*VQGSAV Trigger: TACAGCGCTGCCCTGGACCCAGCCTACACCACCCTG...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGTCCTCACGCTCCTCCTaGAGAACCCCTTGCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISSSRSS*RTPCSR Trigger: ACGGCTGCAAGGGGTTCTTCAGGAGGAGCGTGAGGA...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTGCTGTCCTCGTAGCTTaGCCTCCGCGTGCTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSAVLVA*PPRADP Trigger: CGGATCAGCACGCGGAGGTCAAGCTACGAGGACAGC...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATACCTGCAGGAGCGCGTTaGTGGAGGGCAGGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIPAGAR*WRAGCC Trigger: ACAGCAGCCTGCCCTCCATCAACGCGCTCCTGCAGG...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTGTGGTGGGTGTGGGGTaGATCACTGGCAGACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSVVGVG*ITGRPS Trigger: GGAGGGTCTGCCAGTGATGCACCCCACACCCACCAC...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACTGGCGCACAGGGCACTaGCGCCCAGGCTGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHWRTGH*RPGCWM Trigger: CATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCA...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCCCCACACTGCAGCTACCCCTGACCTCAGTTTGTCATTCAATGGTCCCCCCCGAATGTCGCCATTaGTCCCAGAGATGGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSPTLQLPLTSVCHSMVPPECRH*SQRWER Trigger: CCTCTCCCATCTCTGGGATCAATGGCGACATTCGGG...GGGGACCATTGAATGACAAACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTC 58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGGCTCACTTGCACCTGTaGCCGCAGCCGCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISAHLHL*PQPLDL Trigger: AAGATCAAGCGGCTGCGGTCACAGGTGCAAGTGAGC...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCCCCACACTGCAGCTACCCCTGACCTCAGTTTGTCATTCAATGGTCCCCCTGGGACAGAACCTCTaGCTGCAGGAGCGCGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DSPTLQLPLTSVCHSMVPLGQNL*LQERVD Trigger: ATCAACGCGCTCCTGCAGGCAGAGGTTCTGTCCCAG...GGGGACCATTGAATGACAAACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCAGGCCGGGATGTACTTaGCCCACTCGACCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSLPSLSRDRCKARLFLRPGCT*PTRPGP Trigger: TGGTCCTGGTCGAGTGGGCCAAGTACATCCCGGCCT...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGGCCCAGGCTGTTGGATaGATTGAGGTTGGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISAQAVG*IEVGTF Trigger: GAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGC...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTTTGACCTCCGCGTGCTaGTCCGGTCCCGCTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSLTSAC*SGPAHF Trigger: AAAATGAGCGGGACCGGATCAGCACGCGGAGGTCAA...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCCCGAATGTCGCCATTaGTCCCAGAGATGGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSPECRH*SQRWER Trigger: CCTCTCCCATCTCTGGGATCAATGGCGACATTCGGG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGCGTACTGCCGGTCGTTaGTGTAATCCTCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISRTAGR*CNPPGS Trigger: TGAGCCTGGAGGATTACATCAACGACCGGCAGTACG...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCCCCACACTGCAGCTACCCCTGACCTCAGTTTGTCATTCAATGGTCCCCCGTACTGCCGGTCGTTaGTGTAATCCTCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSPTLQLPLTSVCHSMVPRTAGR*CNPPGS Trigger: TGAGCCTGGAGGATTACATCAACGACCGGCAGTACG...GGGGACCATTGAATGACAAACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS-3UTR GCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATAGGCTCCGTAGTGTTTaGCGGTGGCCCGGTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYRLRSV*RWPGRH Trigger: GTGGCGACCGGGCCACCGGCAAACACTACGGAGCCT...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTAGGCTCCGTAGTGTTTaGCGGTGGCCCGGTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLPPILFYLPMGLCPGCSRLRSV*RWPGRH Trigger: GTGGCGACCGGGCCACCGGCAAACACTACGGAGCCT...AGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCACCAGGACCAGCAGCTaGTCCTTCATAGACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVTRTSS*SFIDSH Trigger: GTGTGAGTCTATGAAGGAGCAGCTGCTGGTCCTGGT...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS-3UTR CCA 90 bp | GACAGCCCCACACTGCAGCTACCCCTGACCTCAGTTTGTCATTCAATGGTCCCCCCATGGACCTCTTGGTaGCTCCAAGCAGCAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSPTLQLPLTSVCHSMVPPWTSW*LQAADA Trigger: AGCATCTGCTGCTTGGAGCCACCAAGAGGTCCATGG...GGGGACCATTGAATGACAAACTGAGGTCAGGGGTAGCTGCAGTGTGGGGCTGTC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS-3UTR CCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCATCGAGGATGCGGATaGACACACGGCTCATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSHRGCG*THGSSP Trigger: CGGAGATGAGCCGTGTGTCCATCCGCATCCTCGATG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACCGATCATCTGCCAGGTaGTGCTCTGCAGCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHRSSAR*CSAAWA Trigger: TGCCCACGCTGCAGAGCATCACCTGGCAGATGATCG...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACTGTTCTTGCATCAGGTaGGGGTGCAGGGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHCSCIR*GCRGWW Trigger: CCACCACCCCCTGCACCCTCACCTGATGCAAGAACA...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTCAGAAAGTTTGTTTCCAGGCCCCCTGACCAGCACCAGGAAGGAAGAGGCACATCTGTCCATTGCTaGGGTGAGAGGGCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKFVSRPPDQHQEGRGTSVHC*GERASC Trigger: ACACGATGCCCTCTCACCTCAGCAATGGACAGATGT...GCCTCTTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATCGAGCCACTTGGTGGTaGTGGCTGTGGAGTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYRATWW*WLWSLG Trigger: CCCGAGACTCCACAGCCATCACCACCAAGTGGCTCG...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTTCCTCCAGGCTCACTTaGACCTGTGACCGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPPILFYLPMGLCPGCSSSRLT*TCDRSR Trigger: GCGGCTGCGGTCACAGGTGCAAGTGAGCCTGGAGGA...AGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAGCTCTCCTGCCTTCATGCAGGACAGTCTGAGCCATCTGGCTGGGGTCCCGAGAAGCATCTCCTaGAGCAGGTTGTCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPAFMQDSLSHLAGVPRSIS*SRLSIL Trigger: CAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGG...GACCCCAGCCAGATGGCTCAGACTGTCCTGCATGAAGGCAGGAGAGCTGAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGCTGCAGGAGTACATGTaGTTCTTCCTCACGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISLQEYM*FFLTLL Trigger: GAGGAGCGTGAGGAAGAACCACATGTACTCCTGCAG...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGACACCATGGACCTCTTaGTGGCTCCAAGCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISTPWTS*WLQAAD Trigger: ATCTGCTGCTTGGAGCCACCAAGAGGTCCATGGTGT...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTGGTGGTGATGGCTCCTaGCAGGAGCTTGTAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSGGDGS*QELVGF Trigger: GAATCCTACAAGCTCCTGCCAGGAGCCATCACCACC...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCTTGCTTGGTGATCGTTaGCTGGGGAATGGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLPSLSRDRCKARLFLLLGDR*LGNGRG Trigger: CCCTCTGCCATTCCCCAGCCAACGATCACCAAGCAA...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACGCTCACTTGCACCTGTaGCCGCAGCCGCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHAHLHL*PQPLDL Trigger: AAGATCAAGCGGCTGCGGTCACAGGTGCAAGTGAGC...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCGATCATCTGCCAGGTaGTGCTCTGCAGCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPPILFYLPMGLCPGCSRSSAR*CSAAWA Trigger: TGCCCACGCTGCAGAGCATCACCTGGCAGATGATCG...AGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATTCCTCCAGGCTCACTTaGACCTGTGACCGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNSSRLT*TCDRSR Trigger: GCGGCTGCGGTCACAGGTGCAAGTGAGCCTGGAGGA...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGATCTGTTCGATCATCTaGCAGGTGATGCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISICSII*QVMLCS Trigger: GCTGCAGAGCATCACCTGGCAGATGATCGAACAGAT...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGAGAGGAGTCCAGGCAGTGGAAGACAGTCCTCCCTGGGGTCTTCTCAAGCTGCAGGAGTACATGTaGTTCTTCCTCACGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLRGVQAVEDSPPWGLLKLQEYM*FFLTLL Trigger: GAGGAGCGTGAGGAAGAACCACATGTACTCCTGCAG...CTTGAGAAGACCCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTCTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATAGGCCGGGATGTACTTaGCCCACTCGACCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYRPGCT*PTRPGP Trigger: TGGTCCTGGTCGAGTGGGCCAAGTACATCCCGGCCT...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CAA 72 bp | ACACTTCCAGACCAGGGGACATTCCTCTTGTTCCCATaGACTAGTGACACTTTGCAGGGGCTCCGCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPDQGTFLLFP*TSDTLQGLRKA Trigger: GGCTTTGCGGAGCCCCTGCAAAGTGTCACTAGTCAATGGGAACAAGAGGAATGTCCCCTGGTCTGGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGTGGCGCACAGGGCACTaGCGCCCAGGCTGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FYLPMGLCPGCSPINWFVWRTGH*RPGCWM Trigger: CATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCA...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCGGTCCCGCTCATTTTaGACAGCTTCCTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSRSRSF*TASFFM Trigger: CATGAAGAAGGAAGCTGTCCAAAATGAGCGGGACCG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACCCATGGACCTCTTGGTaGCTCCAAGCAGCAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHPWTSW*LQAADA Trigger: AGCATCTGCTGCTTGGAGCCACCAAGAGGTCCATGG...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCGGTCACTCAGCCCCTTaGCATCTGGATCAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSLPSLSRDRCKARLFLGHSAP*HLDQRR Trigger: TCTTCTTTGATCCAGATGCCAAGGGGCTGAGTGACC...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CAA 72 bp | AGTACTATAAGGCAAGCTGACCCAGCCTCAGAAAGTTaGTTTCCAGGCCCCCTGACCAGCACCAGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: STIRQADPASES*FPGPLTSTRKE Trigger: TTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCTGGGTCAGCTTGCCTTATAGTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CAA 72 bp | CTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTaGGTCCCGTCATATCGTGTACTAGAAACAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWHPALSTTSLY*VPSYRVLETKL Trigger: GAGCTTTGTTTCTAGTACACGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATAGGCTGTTGGATGAATTaGGGTTGGCACCTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIGCWMN*GWHLQM Trigger: CATCTGAAGGTGCCAACCTCAATTCATCCAACAGCC...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGTGTTCTTGCATCAGGTaGGGGTGCAGGGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STSFSEDLSFRLEFLDTGCSCIR*GCRGWW Trigger: CCACCACCCCCTGCACCCTCACCTGATGCAAGAACA...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACACATCTGTCCATTGCTaGGGTGAGAGGGCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHTSVHC*GERASC Trigger: ACACGATGCCCTCTCACCTCAGCAATGGACAGATGT...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACCAGCTTCCTTCTTCATaGCAGCCCGGAAGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHQLPSS*QPGSTS Trigger: AGAAGTGCTTCCGGGCTGGCATGAAGAAGGAAGCTG...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTATGGGAGAGGTGATCTaGTGGGACAGAACCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPPILFYLPMGLCPGCSMGEVI*WDRTSA Trigger: GGCAGAGGTTCTGTCCCAGCAGATCACCTCTCCCAT...AGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACACCAGGACCAGCAGCTaGTCCTTCATAGACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHTRTSS*SFIDSH Trigger: GTGTGAGTCTATGAAGGAGCAGCTGCTGGTCCTGGT...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATACCGAGAAGCATCTCCTaGAGCAGGTTGTCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIPRSIS*SRLSIL Trigger: CAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGG...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGACGTGTCATTGCCCATaGTCAACACCTGCACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVAPSSVHHQLVLGPVISTCHCP*STPAHF Trigger: AAAATGTGCAGGTGTTGACCATGGGCAATGACACGT...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACACACCATGGACCTCTTaGTGGCTCCAAGCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHTPWTS*WLQAAD Trigger: ATCTGCTGCTTGGAGCCACCAAGAGGTCCATGGTGT...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTTTGCTTGGTGATCGTTaGCTGGGGAATGGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPPILFYLPMGLCPGCSLLGDR*LGNGRG Trigger: CCCTCTGCCATTCCCCAGCCAACGATCACCAAGCAA...AGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATGCCCAGGCTGTTGGATaGATTGAGGTTGGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNAQAVG*IEVGTF Trigger: GAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGC...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGTCCTCACGCTCCTCCTaGAGAACCCCTTGCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FYLPMGLCPGCSPINWFVSSRSS*RTPCSR Trigger: ACGGCTGCAAGGGGTTCTTCAGGAGGAGCGTGAGGA...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCGTTGGCAATCTTCTTTaGCCGAATGTCGCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLPSLSRDRCKARLFLVGNLL*PNVAID Trigger: ATCAATGGCGACATTCGGGCAAAGAAGATTGCCAAC...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGGCTCCAAGCAGCAGATaGTCACCGGCGTGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWAPSSR*SPAWAL Trigger: CAGGGCCCACGCCGGTGAGCATCTGCTGCTTGGAGC...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACATCTGTTCGATCATCTaGCAGGTGATGCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHICSII*QVMLCS Trigger: GCTGCAGAGCATCACCTGGCAGATGATCGAACAGAT...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGGGAGAGGTGATCTGCTaGGACAGAACCTCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STSFSEDLSFRLEFLDTGGEVIC*DRTSAC Trigger: GCAGGCAGAGGTTCTGTCCCAGCAGATCACCTCTCC...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGCATCGAGGATGCGGATaGACACACGGCTCATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STSFSEDLSFRLEFLDTGHRGCG*THGSSP Trigger: CGGAGATGAGCCGTGTGTCCATCCGCATCCTCGATG...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATGGTGGTGATGGCTCCTaGCAGGAGCTTGTAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNGGDGS*QELVGF Trigger: GAATCCTACAAGCTCCTGCCAGGAGCCATCACCACC...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CAA 72 bp | GGAAAACTGTGGCACCCAGCTCTGTCCACCACCAGCTaGTACTTGGTCCCGTCATATCGTGTACTAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GKLWHPALSTTS*YLVPSYRVLET Trigger: TGTTTCTAGTACACGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGTTGACCTCCGCGTGCTaGTCCGGTCCCGCTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYLPMGLCPGCSPINWFVLTSAC*SGPAHF Trigger: AAAATGAGCGGGACCGGATCAGCACGCGGAGGTCAA...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGGCTGTCCTCGTAGCTTaGCCTCCGCGTGCTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWAVLVA*PPRADP Trigger: CGGATCAGCACGCGGAGGTCAAGCTACGAGGACAGC...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACCCCATGGTCAACACCTaGACATTTTCAAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHPMVNT*TFSNSR Trigger: CCTGGAGTTTGAAAATGTGCAGGTGTTGACCATGGG...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGCTGGGACAGAACCTCTaGCTGCAGGAGCGCGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYLPMGLCPGCSPINWFVLGQNL*LQERVD Trigger: ATCAACGCGCTCCTGCAGGCAGAGGTTCTGTCCCAG...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTAAGAGCTTGATGAACTaGATCTGTTCGATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRRLLPLKANITYSSKSLMN*ICSIIC Trigger: GCAGATGATCGAACAGATCCAGTTCATCAAGCTCTT...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTGTTGGCAATCTTCTTTaGCCGAATGTCGCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLPPILFYLPMGLCPGCSVGNLL*PNVAID Trigger: ATCAATGGCGACATTCGGGCAAAGAAGATTGCCAAC...AGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATACGTGTCATTGCCCATaGTCAACACCTGCACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYTCHCP*STPAHF Trigger: AAAATGTGCAGGTGTTGACCATGGGCAATGACACGT...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGGGAGAGGTGATCTGCTaGGACAGAACCTCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWGEVIC*DRTSAC Trigger: GCAGGCAGAGGTTCTGTCCCAGCAGATCACCTCTCC...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATACTCACACACGTCTGTaGTGTTGGCAATCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNTHTRL*CWQSSL Trigger: CAAAGAAGATTGCCAACATCACAGACGTGTGTGAGT...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGATGGGAGAGGTGATCTaGTGGGACAGAACCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWMGEVI*WDRTSA Trigger: GGCAGAGGTTCTGTCCCAGCAGATCACCTCTCCCAT...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CAA 72 bp | CCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTaGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSHTILPTYGP*SRLFSNKLVCV Trigger: GACACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCACAGGAAGGTGCAGATTGATCTGATGGGACACAGCCTACTTCTGAATAAGAGCTTGATGAACTaGATCTGTTCGATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HNHRKVQIDLMGHSLLLNKSLMN*ICSIIC Trigger: GCAGATGATCGAACAGATCCAGTTCATCAAGCTCTT...ATTCAGAAGTAGGCTGTGTCCCATCAGATCAATCTGCACCTTCCTGTGGTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| 3UTR CAA 72 bp | TACCCTGTCACAACTCCATGGGAACTGATTTCTTCATaGCCTCCCTCCCATACTATTTTACCTACCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPVTTPWELISS*PPSHTILPTYG Trigger: CCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCAATGAAGAAATCAGTTCCCATGGAGTTGTGACAGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGACTCACACACGTCTGTaGTGTTGGCAATCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FYLPMGLCPGCSPINWFVTHTRL*CWQSSL Trigger: CAAAGAAGATTGCCAACATCACAGACGTGTGTGAGT...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGCGGTCCCGCTCATTTTaGACAGCTTCCTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWRSRSF*TASFFM Trigger: CATGAAGAAGGAAGCTGTCCAAAATGAGCGGGACCG...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGGGTCACTCAGCCCCTTaGCATCTGGATCAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWGHSAP*HLDQRR Trigger: TCTTCTTTGATCCAGATGCCAAGGGGCTGAGTGACC...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR GCA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGCCCATGGTCAACACCTaGACATTTTCAAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWPMVNT*TFSNSR Trigger: CCTGGAGTTTGAAAATGTGCAGGTGTTGACCATGGG...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS GCA 90 bp | GAGCCACTTGGTGGTGATGGCTGTGGAGTCTCGGGAGTGGCTGCCTaGCCCCTGGGTCGGGGCCACTCACACATCTGTCCATTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPLGGDGCGVSGVAA*PLGRGHSHICPLLR Trigger: CCTCAGCAATGGACAGATGTGTGAGTGGCCCCGACCCAGGGGGCAGGCAGCCACTCCCGAGACTCCACAGCCATCACCACCAAGTGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS CCA 90 bp | CCAAGCAGCAGATGCTCACCGGCGTGGGCCCTGAGCAGCGCCACCTaGTCATCCAGAAGGAGTTCGCAGAAGGCCGGGATGTACTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSSRCSPAWALSSAT*SSRRSSQKAGMYLA Trigger: GGCCAAGTACATCCCGGCCTTCTGCGAACTCCTTCTGGATGACCAGGTGGCGCTGCTCAGGGCCCACGCCGGTGAGCATCTGCTGCTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS TCA 90 bp | TCCTGGCAGGAGCTTGTAGGATTCAGATCCCGAGCCACTTGGTGGTaGTGGCTGTGGAGTCTCGGGAGTGGCTGCCTGCCCCCTGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SWQELVGFRSRATWW*WLWSLGSGCLPPGS Trigger: CGACCCAGGGGGCAGGCAGCCACTCCCGAGACTCCACAGCCATCACCACCAAGTGGCTCGGGATCTGAATCCTACAAGCTCCTGCCAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS TCA 90 bp | CTGCAGGAGCGCGTTGATGGAGGGCAGGCTGCTGTCCTCGTAGCTTaGCCTCCGCGTGCTGATCCGGTCCCGCTCATTTTGGACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQERVDGGQAAVLVA*PPRADPVPLILDSF Trigger: GAAGCTGTCCAAAATGAGCGGGACCGGATCAGCACGCGGAGGTCAAGCTACGAGGACAGCAGCCTGCCCTCCATCAACGCGCTCCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
||
| CDS TCA 90 bp | GCAGCAGCTCTCCAAAGCGGCCCCGAGAGTCGTACTGCCGGTCGTTaGTGTAATCCTCCAGGCTCACTTGCACCTGTGACCGCAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAALQSGPESRTAGR*CNPPGSLAPVTAAA Trigger: AGCGGCTGCGGTCACAGGTGCAAGTGAGCCTGGAGGATTACATCAACGACCGGCAGTACGACTCTCGGGGCCGCTTTGGAGAGCTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS CCA 90 bp | TCTGCAGCTCTTGGAAGGGCAGGACCAGCTCATCGAGGATGCGGATaGACACACGGCTCATCTCCGCTAGCTCTGGACAGTGCCGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAALGRAGPAHRGCG*THGSSPLALDSAEG Trigger: TCCCTCGGCACTGTCCAGAGCTAGCGGAGATGAGCCGTGTGTCCATCCGCATCCTCGATGAGCTGGTCCTGCCCTTCCAAGAGCTGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS CCA 90 bp | GCATCAGGTGAGGGTGCAGGGGGTGGTGGGTGTGGGGTGCATCACTaGCAGACCCTCCGAGAAGCATCTCCTGCAGCAGGTTGTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: ASGEGAGGGGCGVHH*QTLREASPAAGCQS Trigger: AGATTGACAACCTGCTGCAGGAGATGCTTCTCGGAGGGTCTGCCAGTGATGCACCCCACACCCACCACCCCCTGCACCCTCACCTGATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATACGCAGCCGCTTGATCTaGCCCGGGTCACTCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIRSRLI*PGSLSP Trigger: GGGGCTGAGTGACCCGGGCAAGATCAAGCGGCTGCG...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS TCA 90 bp | GTCGCCACAGATGGCGCACAGGGCACTGACGCCCAGGCTGTTGGATaGATTGAGGTTGGCACCTTCAGATGGGGACGTGTCATTGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VATDGAQGTDAQAVG*IEVGTFRWGRVIAH Trigger: ATGGGCAATGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCATCTGTGGCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS TCA 90 bp | GTCGCCACAGATGGCGCACAGGGCACTGACGCCCAGGCTGTTGGATaGATTGAGGTTGGCACCTTCAGATGGGGACGTGTCTGTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: VATDGAQGTDAQAVG*IEVGTFRWGRVCQT Trigger: TGTCTGACAGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCATCTGTGGCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137449.2 |
||
| CDS GCA 90 bp | ATTGATCCCAGAGATGGGAGAGGTGATCTGCTGGGACAGAACCTCTaGCTGCAGGAGCGCGTTGATGGAGGGCAGGCTGCTGTCCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: IDPRDGRGDLLGQNL*LQERVDGGQAAVLV Trigger: TACGAGGACAGCAGCCTGCCCTCCATCAACGCGCTCCTGCAGGCAGAGGTTCTGTCCCAGCAGATCACCTCTCCCATCTCTGGGATCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
||
| CDS TCA 90 bp | GTCGCCACAGATGGCGCACAGGGCACTGACGCCCAGGCTGTTGGATaGATTGAGGTTGGCACCTTCAGATGGGGACGTGTCATAAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: VATDGAQGTDAQAVG*IEVGTFRWGRVIRT Trigger: AGTCCTTATGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCATCTGTGGCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143911.8 |
||
| CDS-3UTR CAA 90 bp | AACTTGAGAGGAGTCCAGGCAGTGGAAGACAGTCCTCCCTGGGGTCTTCTCAAGCTCCTGAAGAACCCCTaGCAGCCGTCACAGCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NLRGVQAVEDSPPWGLLKLLKNP*QPSQLE Trigger: CTCGAGCTGTGACGGCTGCAAGGGGTTCTTCAGGAG...CTTGAGAAGACCCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTCTCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATCGCAGCCGCTTGATCTaGCCCGGGTCACTCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYRSRLI*PGSLSP Trigger: GGGGCTGAGTGACCCGGGCAAGATCAAGCGGCTGCG...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS TCA 90 bp | TGCCCCCTGGGTCGGGGCCACTCACACATCTGTCCATTGCTGAGGTaGGAGGGCATCGTGTTAGCAACAATGACATTGGTGCCCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CPLGRGHSHICPLLR*EGIVLATMTLVPMC Trigger: ACACATGGGCACCAATGTCATTGTTGCTAACACGATGCCCTCTCACCTCAGCAATGGACAGATGTGTGAGTGGCCCCGACCCAGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS GCA 90 bp | TGGGTGTGGGGTGCATCACTGGCAGACCCTCCGAGAAGCATCTCCTaGAGCAGGTTGTCAATCTTGGCCATGCCGAAGAGCTTGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WVWGASLADPPRSIS*SRLSILAMPKSLMN Trigger: GTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGGAGGGTCTGCCAGTGATGCACCCCACACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGAAGCCTACCTTCCCTGTCAAGGGACAGATGCAAAGCTCGCCTCTTTCTCGCCCGAATGTCGCCATaGATCCCAGAGATGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARSLPSLSRDRCKARLFLARMSP*IPEMGE Trigger: CTCTCCCATCTCTGGGATCAATGGCGACATTCGGGC...GAGAAAGAGGCGAGCTTTGCATCTGTCCCTTGACAGGGAAGGTAGGCTTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTGGCACCCAGCTCTGTCCACCACCAGCTTGTACTTGGTCCCGTCATATCGATCTCCTGCAGCAGGTaGTCAATCTTGGCCATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TVAPSSVHHQLVLGPVISISCSR*SILAMP Trigger: CGGCATGGCCAAGATTGACAACCTGCTGCAGGAGAT...CGATATGACGGGACCAAGTACAAGCTGGTGGTGGACAGAGCTGGGTGCCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | AACTTGAGAGGAGTCCAGGCAGTGGAAGACAGTCCTCCCTGGGGTCTTCTCAAGATGGCAGAGGGAGGCTaGACGATGGTGGTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLRGVQAVEDSPPWGLLKMAEGG*TMVVMA Trigger: AGCCATCACCACCATCGTCAAGCCTCCCTCTGCCAT...CTTGAGAAGACCCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTCTCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS GCA 90 bp | CAGAAGGCCGGGATGTACTTGGCCCACTCGACCAGGACCAGCAGCTaGTCCTTCATAGACTCACACACGTCTGTGATGTTGGCAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QKAGMYLAHSTRTSS*SFIDSHTSVMLAIF Trigger: GAAGATTGCCAACATCACAGACGTGTGTGAGTCTATGAAGGAGCAGCTGCTGGTCCTGGTCGAGTGGGCCAAGTACATCCCGGCCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
||
| CDS-3UTR CAA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGGCCTGCAGGAGCGCGTaGATGGAGGGCAGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STSFSEDLSFRLEFLDTGACRSA*MEGRLL Trigger: CAGCAGCCTGCCCTCCATCAACGCGCTCCTGCAGGC...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGAAAGTTTGTTTCCAGGCCCCCTGACCAGCACCAGGAAGGAAGAGGCGCCATGCCGAAGAGCTaGATGAACTGGATCTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLRKFVSRPPDQHQEGRGAMPKS*MNWICS Trigger: CGAACAGATCCAGTTCATCAAGCTCTTCGGCATGGC...GCCTCTTCCTTCCTGGTGCTGGTCAGGGGGCCTGGAAACAAACTTTCTGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | AACTTGAGAGGAGTCCAGGCAGTGGAAGACAGTCCTCCCTGGGGTCTTCTCAAGATCTCCTGCAGCAGGTaGTCAATCTTGGCCATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NLRGVQAVEDSPPWGLLKISCSR*SILAMP Trigger: CGGCATGGCCAAGATTGACAACCTGCTGCAGGAGAT...CTTGAGAAGACCCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTCTCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATAGGTGCCCATGTGTTCTaGCATCAGGTGAGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIGAHVF*HQVRVQ Trigger: CTGCACCCTCACCTGATGCAAGAACACATGGGCACC...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATACTGACGCCCAGGCTGTaGGATGAATTGAGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QMAEEGIEDGSRSPEVGILTPRL*DELRLA Trigger: TGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAG...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTCCCTCCCATACTATTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCTCCTGAAGAACCCCTaGCAGCCGTCACAGCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLPPILFYLPMGLCPGCSLLKNP*QPSQLE Trigger: CTCGAGCTGTGACGGCTGCAAGGGGTTCTTCAGGAG...AGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAATAGTATGGGAGGGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | AACTTGAGAGGAGTCCAGGCAGTGGAAGACAGTCCTCCCTGGGGTCTTCTCAAGCCGGTCCCGCTCATTTaGGACAGCTTCCTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NLRGVQAVEDSPPWGLLKPVPLI*DSFLLH Trigger: ATGAAGAAGGAAGCTGTCCAAAATGAGCGGGACCGG...CTTGAGAAGACCCCAGGGAGGACTGTCTTCCACTGCCTGGACTCCTCTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCCGGTCCCGCTCATTTaGGACAGCTTCCTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DPCPRRLLPLKANITYSSPVPLI*DSFLLH Trigger: ATGAAGAAGGAAGCTGTCCAAAATGAGCGGGACCGG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATGCCCGAATGTCGCCATaGATCCCAGAGATGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYARMSP*IPEMGE Trigger: CTCTCCCATCTCTGGGATCAATGGCGACATTCGGGC...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTCACACGTCTGTGATGTaGGCAATCTTCTTTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: DPCPRRLLPLKANITYSSHTSVM*AIFFAR Trigger: TCGGGCAAAGAAGATTGCCAACATCACAGACGTGTG...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATAGCCATGCCGAAGAGCTaGATGAACTGGATCTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIAMPKS*MNWICS Trigger: CGAACAGATCCAGTTCATCAAGCTCTTCGGCATGGC...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGGCCTGCAGGAGCGCGTaGATGGAGGGCAGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWACRSA*MEGRLL Trigger: CAGCAGCCTGCCCTCCATCAACGCGCTCCTGCAGGC...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTTGGTTCCTCTTATCTTaGTCTACCACACATTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: DPCPRRLLPLKANITYSSWFLLS*STTHCR Trigger: CCGACAATGTGTGGTAGACAAAGATAAGAGGAACCA...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCATATCCTACCTCTGCGGGATGCTGTATTCATCTTCTGACAGCCCCACACCACACGTCTGTGATGTaGGCAATCTTCTTTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSYPTSAGCCIHLLTAPHHTSVM*AIFFAR Trigger: TCGGGCAAAGAAGATTGCCAACATCACAGACGTGTG...GTGTGGGGCTGTCAGAAGATGAATACAGCATCCCGCAGAGGTAGGATATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GACCCCTGCCCCAGAAGACTGCTACCACTGAAGGCCAACATTACCTACTCCTCTAGGCAGGCATATTCATaGTCATCAATCTGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DPCPRRLLPLKANITYSSRQAYS*SSICSS Trigger: AGAGCTGCAGATTGATGACAATGAATATGCCTGCCT...AGAGGAGTAGGTAATGTTGGCCTTCAGTGGTAGCAGTCTTCTGGGGCAGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTTTCTCGATGCTTTCCCAATGACGGCCACCCACTCTCCACATTCTGTTATAGCAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLSRCFPNDGHPLSTFCYSRLSI*AMPKSL Trigger: CAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCT...ATAACAGAATGTGGAGAGTGGGTGGCCGTCATTGGGAAAGCATCGAGAAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGGGTGCCCATGTGTTCTaGCATCAGGTGAGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: STSFSEDLSFRLEFLDTGGAHVF*HQVRVQ Trigger: CTGCACCCTCACCTGATGCAAGAACACATGGGCACC...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS GCA 90 bp | CTCCTTCATAGACTCACACACGTCTGTGATGTTGGCAATCTTCTTTaGCCGAATGTCGCCATTGATCCCAGAGATGGGAGAGGTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLHRLTHVCDVGNLL*PNVAIDPRDGRGDL Trigger: CAGATCACCTCTCCCATCTCTGGGATCAATGGCGACATTCGGGCAAAGAAGATTGCCAACATCACAGACGTGTGTGAGTCTATGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
||
| CDS-3UTR CAA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATATGGTTCCTCTTATCTTaGTCTACCACACATTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIWFLLS*STTHCR Trigger: CCGACAATGTGTGGTAGACAAAGATAAGAGGAACCA...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGGCGGAGGAAGGTATAGAGGATGGTAGCAGGTCACCTGAGGTTGGCATAAGGCAGGCATATTCATaGTCATCAATCTGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QMAEEGIEDGSRSPEVGIRQAYS*SSICSS Trigger: AGAGCTGCAGATTGATGACAATGAATATGCCTGCCT...TATGCCAACCTCAGGTGACCTGCTACCATCCTCTATACCTTCCTCCGCCATCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACCTACCTATGGGCCTTTGTCCAGGCTGTTCTCCAATAAACTGGTTTGTGATCAATCTGCAGCTCTaGGAAGGGCAGGACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FYLPMGLCPGCSPINWFVINLQL*EGQDQL Trigger: GAGCTGGTCCTGCCCTTCCAAGAGCTGCAGATTGAT...CACAAACCAGTTTATTGGAGAACAGCCTGGACAAAGGCCCATAGGTAGGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCTCTTTTTCAGAGGACCTGTCATTTAGGCTGGAATTTTTGGACACTGGGAGCAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: STSFSEDLSFRLEFLDTGSRLSI*AMPKSL Trigger: CAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCT...CCCAGTGTCCAAAAATTCCAGCCTAAATGACAGGTCCTCTGAAAAAGAGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGATCAATCTGCAGCTCTaGGAAGGGCAGGACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWINLQL*EGQDQL Trigger: GAGCTGGTCCTGCCCTTCCAAGAGCTGCAGATTGAT...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS-3UTR CAA 90 bp | GATGGTGGCTGTTTAATGCCTTATAACATCATCTGGAAGTATGGAAAAGCTTGGTTAGCAACAATGACATaGGTGCCCATGTGTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DGGCLMPYNIIWKYGKAWLATMT*VPMCSC Trigger: GCAAGAACACATGGGCACCAATGTCATTGTTGCTAA...CCAAGCTTTTCCATACTTCCAGATGATGTTATAAGGCATTAAACAGCCACCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS TCA 72 bp | TGGCTCCAAGCAGCAGATGCTCACCGGCGTGGGCCCTaGGCAGCGCCACCTGGTCATCCAGAAGGAGTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: WLQAADAHRRGP*AAPPGHPEGVR Trigger: GCGAACTCCTTCTGGATGACCAGGTGGCGCTGCTCAGGGCCCACGCCGGTGAGCATCTGCTGCTTGGAGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
||
| CDS TCA 72 bp | CCTCCAGGCTCACTTGCACCTGTGACCGCAGCCGCTTaGTCTTGCCCGGGTCACTCAGCCCCTTGGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPGSLAPVTAAA*SCPGHSAPWHL Trigger: CAGATGCCAAGGGGCTGAGTGACCCGGGCAAGATCAAGCGGCTGCGGTCACAGGTGCAAGTGAGCCTGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | GCCCGGTCGCCACAGATGGCGCACAGGGCACTGACGCCCAGGCTGTaGGATGAATTGAGGTTGGCACCTTCAGATGGGGACGTGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ARSPQMAHRALTPRL*DELRLAPSDGDVSV Trigger: GACAGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCATCTGTGGCGACCGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137449.2 |
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| CDS CAA 72 bp | TCCTCCAGGCTCACTTGCACCTGTGACCGCAGCCGCTaGATCTTGCCCGGGTCACTCAGCCCCTTGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SSRLTCTCDRSR*ILPGSLSPLAS Trigger: AGATGCCAAGGGGCTGAGTGACCCGGGCAAGATCAAGCGGCTGCGGTCACAGGTGCAAGTGAGCCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | GCCCGGTCGCCACAGATGGCGCACAGGGCACTGACGCCCAGGCTGTaGGATGAATTGAGGTTGGCACCTTCAGATGGGGACGTGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: ARSPQMAHRALTPRL*DELRLAPSDGDVSL Trigger: CAATGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCATCTGTGGCGACCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS GCA 72 bp | AGAGATGGGAGAGGTGATCTGCTGGGACAGAACCTCTaGCTGCAGGAGCGCGTTGATGGAGGGCAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RDGRGDLLGQNL*LQERVDGGQAA Trigger: AGCAGCCTGCCCTCCATCAACGCGCTCCTGCAGGCAGAGGTTCTGTCCCAGCAGATCACCTCTCCCATCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS CAA 72 bp | AGGCTCACTTGCACCTGTGACCGCAGCCGCTTGATCTaGCCCGGGTCACTCAGCCCCTTGGCATCTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: RLTCTCDRSRLI*PGSLSPLASGS Trigger: TGATCCAGATGCCAAGGGGCTGAGTGACCCGGGCAAGATCAAGCGGCTGCGGTCACAGGTGCAAGTGAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS TCA 72 bp | GCAGGCTGCTGTCCTCGTAGCTTGACCTCCGCGTGCTaGTCCGGTCCCGCTCATTTTGGACAGCTTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AGCCPRSLTSAC*SGPAHFGQLPS Trigger: AGAAGGAAGCTGTCCAAAATGAGCGGGACCGGATCAGCACGCGGAGGTCAAGCTACGAGGACAGCAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS TCA 72 bp | CTCCAAAGCGGCCCCGAGAGTCGTACTGCCGGTCGTTaGTGTAATCCTCCAGGCTCACTTGCACCTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: LQSGPESRTAGR*CNPPGSLAPVT Trigger: GGTCACAGGTGCAAGTGAGCCTGGAGGATTACATCAACGACCGGCAGTACGACTCTCGGGGCCGCTTTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CCA 72 bp | CTTGGAAGGGCAGGACCAGCTCATCGAGGATGCGGATaGACACACGGCTCATCTCCGCTAGCTCTGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: LGRAGPAHRGCG*THGSSPLALDS Trigger: ACTGTCCAGAGCTAGCGGAGATGAGCCGTGTGTCCATCCGCATCCTCGATGAGCTGGTCCTGCCCTTCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CCA 72 bp | GGCAGAGGGAGGCTTGACGATGGTGGTGATGGCTCCTaGCAGGAGCTTGTAGGATTCAGATCCCGAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: GRGRLDDGGDGS*QELVGFRSRAT Trigger: AGTGGCTCGGGATCTGAATCCTACAAGCTCCTGCCAGGAGCCATCACCACCATCGTCAAGCCTCCCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 72 bp | CTGGCAGGAGCTTGTAGGATTCAGATCCCGAGCCACTaGGTGGTGATGGCTGTGGAGTCTCGGGAGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LAGACRIQIPSH*VVMAVESREWL Trigger: CAGCCACTCCCGAGACTCCACAGCCATCACCACCAAGTGGCTCGGGATCTGAATCCTACAAGCTCCTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 72 bp | GCGCACAGGGCACTGACGCCCAGGCTGTTGGATGAATaGAGGTTGGCACCTTCAGATGGGGACGTGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AHRALTPRLLDE*RLAPSDGDVSV Trigger: GACAGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137449.2 |
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| CDS CAA 90 bp | CCACAGATGGCGCACAGGGCACTGACGCCCAGGCTGTTGGATGAATaGAGGTTGGCACCTTCAGATGGGGACGTGTCATTGCCCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: PQMAHRALTPRLLDE*RLAPSDGDVSLPMV Trigger: GACCATGGGCAATGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCATCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | GCCACCTGGTCATCCAGAAGGAGTTCGCAGAAGGCCGGGATGTACTaGGCCCACTCGACCAGGACCAGCAGCTGCTCCTTCATAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: ATWSSRRSSQKAGMY*AHSTRTSSCSFIDS Trigger: TGAGTCTATGAAGGAGCAGCTGCTGGTCCTGGTCGAGTGGGCCAAGTACATCCCGGCCTTCTGCGAACTCCTTCTGGATGACCAGGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | CCACAGATGGCGCACAGGGCACTGACGCCCAGGCTGTTGGATGAATaGAGGTTGGCACCTTCAGATGGGGACGTGTCTGTCAGACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PQMAHRALTPRLLDE*RLAPSDGDVSVRQS Trigger: GCTCTGTCTGACAGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCATCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137449.2 |
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| CDS CAA 90 bp | ATGGCGCACAGGGCACTGACGCCCAGGCTGTTGGATGAATTGAGGTaGGCACCTTCAGATGGGGACGTGTCATTGCCCATGGTCAACACC | + |
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Preference number: 6 (lower is better) Translates to: MAHRALTPRLLDELR*APSDGDVSLPMVNT Trigger: GGTGTTGACCATGGGCAATGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS TCA 72 bp | TGCAGGAGTACATGTGGTTCTTCCTCACGCTCCTCCTaGAGAACCCCTTGCAGCCGTCACAGCTCGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CRSTCGSSSRSS*RTPCSRHSSRL Trigger: GAGCCTCGAGCTGTGACGGCTGCAAGGGGTTCTTCAGGAGGAGCGTGAGGAAGAACCACATGTACTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 ENSMUST00000143911.8 |
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| CDS GCA 72 bp | ATGTCGCCATTGATCCCAGAGATGGGAGAGGTGATCTaGTGGGACAGAACCTCTGCCTGCAGGAGCGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: MSPLIPEMGEVI*WDRTSACRSAL Trigger: CAACGCGCTCCTGCAGGCAGAGGTTCTGTCCCAGCAGATCACCTCTCCCATCTCTGGGATCAATGGCGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS GCA 72 bp | GGTGCATCACTGGCAGACCCTCCGAGAAGCATCTCCTaGAGCAGGTTGTCAATCTTGGCCATGCCGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GASLADPPRSIS*SRLSILAMPKS Trigger: GCTCTTCGGCATGGCCAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGGAGGGTCTGCCAGTGATGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 72 bp | GCGCACAGGGCACTGACGCCCAGGCTGTTGGATGAATaGAGGTTGGCACCTTCAGATGGGGACGTGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: AHRALTPRLLDE*RLAPSDGDVSL Trigger: CAATGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | ATGGCGCACAGGGCACTGACGCCCAGGCTGTTGGATGAATTGAGGTaGGCACCTTCAGATGGGGACGTGTCTGTCAGACAGAGCATCATC | + |
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Preference number: 6 (lower is better) Translates to: MAHRALTPRLLDELR*APSDGDVSVRQSII Trigger: GATGATGCTCTGTCTGACAGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCTGTGCGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137449.2 |
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| CDS CAA 72 bp | AGGGCACTGACGCCCAGGCTGTTGGATGAATTGAGGTaGGCACCTTCAGATGGGGACGTGTCATTGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: RALTPRLLDELR*APSDGDVSLPM Trigger: CATGGGCAATGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 72 bp | AGGGCACTGACGCCCAGGCTGTTGGATGAATTGAGGTaGGCACCTTCAGATGGGGACGTGTCTGTCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: RALTPRLLDELR*APSDGDVSVRQ Trigger: CTGTCTGACAGACACGTCCCCATCTGAAGGTGCCAACCTCAATTCATCCAACAGCCTGGGCGTCAGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137449.2 |
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| CDS GCA 72 bp | GGGATGTACTTGGCCCACTCGACCAGGACCAGCAGCTaGTCCTTCATAGACTCACACACGTCTGTGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: GMYLAHSTRTSS*SFIDSHTSVML Trigger: CAACATCACAGACGTGTGTGAGTCTATGAAGGAGCAGCTGCTGGTCCTGGTCGAGTGGGCCAAGTACATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS GCA 72 bp | AACTGGATCTGTTCGATCATCTGCCAGGTGATGCTCTaGAGCGTGGGCAACAGCAGCAGCAGCTCTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: NWICSIICQVML*SVGNSSSSSPK Trigger: CTTTGGAGAGCTGCTGCTGCTGTTGCCCACGCTGCAGAGCATCACCTGGCAGATGATCGAACAGATCCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 72 bp | CTGGCAGACCCTCCGAGAAGCATCTCCTGCAGCAGGTaGTCAATCTTGGCCATGCCGAAGAGCTTGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: LADPPRSISCSR*SILAMPKSLMN Trigger: GTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGGAGGGTCTGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | GGTGCATCACTGGCAGACCCTCCGAGAAGCATCTCCTGCAGCAGGTaGTCAATCTTGGCCATGCCGAAGAGCTTGATGAACTGGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: GASLADPPRSISCSR*SILAMPKSLMNWIC Trigger: ACAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGGAGGGTCTGCCAGTGATGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS TCA 72 bp | GGTCGGGGCCACTCACACATCTGTCCATTGCTGAGGTaGGAGGGCATCGTGTTAGCAACAATGACATTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GRGHSHICPLLR*EGIVLATMTLV Trigger: CACCAATGTCATTGTTGCTAACACGATGCCCTCTCACCTCAGCAATGGACAGATGTGTGAGTGGCCCCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | CTGGCAGACCCTCCGAGAAGCATCTCCTGCAGCAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTGATGAACTGGATCTGTTCGATCATC | + |
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Preference number: 6 (lower is better) Translates to: LADPPRSISCSRLSI*AMPKSLMNWICSII Trigger: GATGATCGAACAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGGAGGGTCTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CCA 72 bp | ACCACACATTGTCGGCTAAACCTGCAGGAGTACATGTaGTTCTTCCTCACGCTCCTCCTGAAGAACCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TTHCRLNLQEYM*FFLTLLLKNPL Trigger: CAAGGGGTTCTTCAGGAGGAGCGTGAGGAAGAACCACATGTACTCCTGCAGGTTTAGCCGACAATGTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 ENSMUST00000143911.8 |
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| CDS CAA 72 bp | GTGATGTTGGCAATCTTCTTTGCCCGAATGTCGCCATaGATCCCAGAGATGGGAGAGGTGATCTGCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: VMLAIFFARMSP*IPEMGEVICWD Trigger: GTCCCAGCAGATCACCTCTCCCATCTCTGGGATCAATGGCGACATTCGGGCAAAGAAGATTGCCAACATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS CAA 72 bp | CCTCCGAGAAGCATCTCCTGCAGCAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTGATGAACTGGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: PPRSISCSRLSI*AMPKSLMNWIC Trigger: ACAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCTGCAGGAGATGCTTCTCGGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS CAA 90 bp | CACACGTCTGTGATGTTGGCAATCTTCTTTGCCCGAATGTCGCCATaGATCCCAGAGATGGGAGAGGTGATCTGCTGGGACAGAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: HTSVMLAIFFARMSP*IPEMGEVICWDRTS Trigger: AGAGGTTCTGTCCCAGCAGATCACCTCTCCCATCTCTGGGATCAATGGCGACATTCGGGCAAAGAAGATTGCCAACATCACAGACGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS CAA 90 bp | AGGACCAGCAGCTGCTCCTTCATAGACTCACACACGTCTGTGATGTaGGCAATCTTCTTTGCCCGAATGTCGCCATTGATCCCAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: RTSSCSFIDSHTSVM*AIFFARMSPLIPEM Trigger: CATCTCTGGGATCAATGGCGACATTCGGGCAAAGAAGATTGCCAACATCACAGACGTGTGTGAGTCTATGAAGGAGCAGCTGCTGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS CAA 72 bp | TGCAGCAGGTTGTCAATCTTGGCCATGCCGAAGAGCTaGATGAACTGGATCTGTTCGATCATCTGCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CSRLSILAMPKS*MNWICSIICQV Trigger: CACCTGGCAGATGATCGAACAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGCTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 |
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| CDS GCA 72 bp | AGACTCACACACGTCTGTGATGTTGGCAATCTTCTTTaGCCGAATGTCGCCATTGATCCCAGAGATGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RLTHVCDVGNLL*PNVAIDPRDGR Trigger: TCTCCCATCTCTGGGATCAATGGCGACATTCGGGCAAAGAAGATTGCCAACATCACAGACGTGTGTGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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| CDS CAA 72 bp | AGCTGCTCCTTCATAGACTCACACACGTCTGTGATGTaGGCAATCTTCTTTGCCCGAATGTCGCCATTGATC | + |
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Preference number: 6 (lower is better) Translates to: SCSFIDSHTSVM*AIFFARMSPLI Trigger: GATCAATGGCGACATTCGGGCAAAGAAGATTGCCAACATCACAGACGTGTGTGAGTCTATGAAGGAGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018094.13 ENSMUST00000109411.8 ENSMUST00000137449.2 |
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