Pregenerated sensors for HNF1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020679Ensembl transcript IDs: ENSMUST00000021016.10, ENSMUST00000108113.3, ENSMUST00000108114.9, ENSMUST00000146786.8
Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCAGGATGTCAGGTGAGCAGGGCCCTCTCCTGGGCTCCCAGGTaGCTGTCTGGTTGCTGGACTTCCCCAGAGACTGATGGTGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LAGCQVSRALSWAPR*LSGCWTSPETDGVE Trigger: TTCCACACCATCAGTCTCTGGGGAAGTCCAGCAACCAGACAGGCACCTGGGAGCCCAGGAGAGGGCCCTGCTCACCTGACATCCTGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CCA 90 bp | TATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCTCCTaGGCTCCCAGGTGCCTGTCTGGTTGCTGGACTTCCCCAGAGACT | + |
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Preference number: 1 (lower is better) Translates to: YLRCLAGCQVSRALS*APRCLSGCWTSPET Trigger: AGTCTCTGGGGAAGTCCAGCAACCAGACAGGCACCTGGGAGCCCAGGAGAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CCA 90 bp | CCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTaGGAGAGCCATCATGACAATACTGCAAAGAAGGGAAGCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: PQQARLWGTQEHLAS*ESHHDNTAKKGSWA Trigger: AGCCCAGCTTCCCTTCTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR TCA 90 bp | CCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATaGCAATACTGCAAAGAAGGGAAGCTGGGCTTCGGGCTGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PLGDTRALGILGEPS*QYCKEGKLGFGLQL Trigger: GAGCTGCAGCCCGAAGCCCAGCTTCCCTTCTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR GCA 90 bp | ACCCTCCTTGGTCCTCATCTTATTTCAGTAACAGATTCAAGTTTTTaGATCAGTTTGTTCGATGATGGGTTGCAGGGGAGACTCCACGGG | + |
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Preference number: 1 (lower is better) Translates to: TLLGPHLISVTDSSF*ISLFDDGLQGRLHG Trigger: CCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATGCAAAAACTTGAATCTGTTACTGAAATAAGATGAGGACCAAGGAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR TCA 90 bp | TCTTATTTCAGTAACAGATTCAAGTTTTTGCATCAGTTTGTTCGATaGTGGGTTGCAGGGGAGACTCCACGGGTTTCTCCCTTCTCGTTG | + |
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Preference number: 1 (lower is better) Translates to: SYFSNRFKFLHQFVR*WVAGETPRVSPFSL Trigger: CAACGAGAAGGGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATGCAAAAACTTGAATCTGTTACTGAAATAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CCA 90 bp | CAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTaGTCCTCATCTTATTTCAGTAACAGATTCAAGTTTTTGCATCAG | + |
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Preference number: 1 (lower is better) Translates to: QYLQCLAQFISTHPP*SSSYFSNRFKFLHQ Trigger: CTGATGCAAAAACTTGAATCTGTTACTGAAATAAGATGAGGACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGATGCGGTGGTTTCGGGTaGGGGAGAGGGAGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GFLRWPSASQCPRPGPQGCGGFG*GRGRER Trigger: CCTCTCCCTCCCTCTCCCCCACCCGAAACCACCGCA...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGACAGCAGGCCCGCCTCTaGGGGACACAAGAGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: GFLRWPSASQCPRPGPQGQQARL*GTQEHL Trigger: CAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTG...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGATCCTGGGCTCCCAGGTaGCTGTCTGGTTGCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: GFLRWPSASQCPRPGPQGSWAPR*LSGCWT Trigger: AGTCCAGCAACCAGACAGGCACCTGGGAGCCCAGGA...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTGGCAGGATGTCAGGTaGGCAGGGCCCTCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ARLWGTQEHLASWESHHDWQDVR*AGPSPG Trigger: CCCAGGAGAGGGCCCTGCTCACCTGACATCCTGCCA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCTCCCAGGTGCCTGTCTaGTTGCTGGACTTCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CPRPGPQGARGILLPLCPSQVPV*LLDFPR Trigger: TCTGGGGAAGTCCAGCAACCAGACAGGCACCTGGGA...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGACCAGAGGGATGCTGGTaGAGAGATTCATTTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: GFLRWPSASQCPRPGPQGPEGCW*RDSFPT Trigger: AGTGGGAAATGAATCTCTTCACCAGCATCCCTCTGG...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTCCTGGGCTCCCAGGTaGCTGTCTGGTTGCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: ARLWGTQEHLASWESHHDSWAPR*LSGCWT Trigger: AGTCCAGCAACCAGACAGGCACCTGGGAGCCCAGGA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGATCCCAGGTGCCTGTCTaGTTGCTGGACTTCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: HSAAGPPLGDTRALGILGSQVPV*LLDFPR Trigger: TCTGGGGAAGTCCAGCAACCAGACAGGCACCTGGGA...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCTCCCAGGTGCCTGTCTaGTTGCTGGACTTCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SGTAYLRCLAGCQVSRALSQVPV*LLDFPR Trigger: TCTGGGGAAGTCCAGCAACCAGACAGGCACCTGGGA...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCAGCAAAGAAGGGAAGCTaGGCTTCGGGCTGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGPPLGDTRALGILGEPSAKKGS*ASGCSS Trigger: AGAGCTGCAGCCCGAAGCCCAGCTTCCCTTCTTTGC...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGTCTTAACATGGGGGTaGGGAGTGTTATCTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GFLRWPSASQCPRPGPQGVLTWG*GVLSGS Trigger: ACTGCCAGATAACACTCCCCACCCCCATGTTAAGAC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCAACGGCTTATCTGAGGTaGCTGGCAGGATGTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: AGPPLGDTRALGILGEPSTAYLR*LAGCQV Trigger: CACCTGACATCCTGCCAGGCACCTCAGATAAGCCGT...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAATCTTGCTGCCATTATaGCCCATCCCTCTAGGAATC | + |
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Preference number: 2 (lower is better) Translates to: GFLRWPSASQCPRPGPQGILLPL*PIPLGI Trigger: GATTCCTAGAGGGATGGGGCATAATGGCAGCAAGAT...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACACGGCTTATCTGAGGTaGCTGGCAGGATGTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ARLWGTQEHLASWESHHDTAYLR*LAGCQV Trigger: CACCTGACATCCTGCCAGGCACCTCAGATAAGCCGT...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCCAGAGACTGATGGTGTaGAAAATGGGGTCCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: CPRPGPQGARGILLPLCPQRLMV*KMGSLL Trigger: CAACAAGGACCCCATTTTCCACACCATCAGTCTCTG...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGAGCACTTGGCATCTTaGGAGAGCCATCATGACAAT | + |
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Preference number: 2 (lower is better) Translates to: CPRPGPQGARGILLPLCPEHLAS*ESHHDN Trigger: ATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAAGCACACACCCTCCTTaGTCCTCATCTTATTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GFLRWPSASQCPRPGPQGSTHPP*SSSYFS Trigger: ACTGAAATAAGATGAGGACCAAGGAGGGTGTGTGCT...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCAGCACACACCCTCCTTaGTCCTCATCTTATTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: CPRPGPQGARGILLPLCPSTHPP*SSSYFS Trigger: ACTGAAATAAGATGAGGACCAAGGAGGGTGTGTGCT...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGAGCAGGGCCCTCTCCTaGGCTCCCAGGTGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GTQEHLASWESHHDNTAKSRALS*APRCLS Trigger: AGACAGGCACCTGGGAGCCCAGGAGAGGGCCCTGCT...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAATCCTGGGCTCCCAGGTaGCTGTCTGGTTGCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: GGHKSTWHLGRAIMTILQSWAPR*LSGCWT Trigger: AGTCCAGCAACCAGACAGGCACCTGGGAGCCCAGGA...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACCAGAGACTGATGGTGTaGAAAATGGGGTCCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: ARLWGTQEHLASWESHHDQRLMV*KMGSLL Trigger: CAACAAGGACCCCATTTTCCACACCATCAGTCTCTG...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCAGTATTTACAGTGTCTaGCTCAGTTCATTAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: CPRPGPQGARGILLPLCPSIYSV*LSSLAH Trigger: GTGTGCTAATGAACTGAGCCAGACACTGTAAATACT...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTTGGCAGGATGTCAGGTaGGCAGGGCCCTCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGWQDVR*AGPSPG Trigger: CCCAGGAGAGGGCCCTGCTCACCTGACATCCTGCCA...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTGCAAAGAAGGGAAGCTaGGCTTCGGGCTGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGAKKGS*ASGCSS Trigger: AGAGCTGCAGCCCGAAGCCCAGCTTCCCTTCTTTGC...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CAA 90 bp | TCAGTAACAGATTCAAGTTTTTGCATCAGTTTGTTCGATGATGGGTaGCAGGGGAGACTCCACGGGTTTCTCCCTTCTCGTTGCACCATT | + |
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Preference number: 2 (lower is better) Translates to: SVTDSSFCISLFDDG*QGRLHGFLPSRCTI Trigger: AATGGTGCAACGAGAAGGGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATGCAAAAACTTGAATCTGTTACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CAA 90 bp | GGTCCTCATCTTATTTCAGTAACAGATTCAAGTTTTTGCATCAGTTaGTTCGATGATGGGTTGCAGGGGAGACTCCACGGGTTTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GPHLISVTDSSFCIS*FDDGLQGRLHGFLP Trigger: AGGGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATGCAAAAACTTGAATCTGTTACTGAAATAAGATGAGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR GCA 72 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTaGCTGGCAGGATGTCAGGTGAGCAGGGCCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: FGLQLSGTAYLR*LAGCQVSRALS Trigger: GGAGAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CAA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGACAGGTGCCTGTCTGGTaGCTGGACTTCCCCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: HSAAGPPLGDTRALGILGQVPVW*LDFPRD Trigger: GTCTCTGGGGAAGTCCAGCAACCAGACAGGCACCTG...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR-3UTR CAA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCCAGGTGCCTGTCTGGTaGCTGGACTTCCCCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: SGTAYLRCLAGCQVSRALQVPVW*LDFPRD Trigger: GTCTCTGGGGAAGTCCAGCAACCAGACAGGCACCTG...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CCA 72 bp | CCTTCTCGTTGCACCATTCCGCAGCAGGCCCGCCTCTaGGGGACACAAGAGCACTTGGCATCTTGGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: PSRCTIPQQARL*GTQEHLASWES Trigger: GCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATGGTGCAACGAGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR GCA 72 bp | AGGGCCCTCTCCTGGGCTCCCAGGTGCCTGTCTGGTTaGTGGACTTCCCCAGAGACTGATGGTGTGGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: RALSWAPRCLSG*WTSPETDGVEN Trigger: ATTTTCCACACCATCAGTCTCTGGGGAAGTCCAGCAACCAGACAGGCACCTGGGAGCCCAGGAGAGGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CCA 72 bp | GAGAGCCATCATGACAATACTGCAAAGAAGGGAAGCTaGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATC | + |
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Preference number: 3 (lower is better) Translates to: ESHHDNTAKKGS*ASGCSSRERLI Trigger: GATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTTCCCTTCTTTGCAGTATTGTCATGATGGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CCA 72 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTaGGAGAGCCATCATGACAATACTGCAAAGAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: ARLWGTQEHLAS*ESHHDNTAKKG Trigger: TCCCTTCTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR TCA 72 bp | AGTAACAGATTCAAGTTTTTGCATCAGTTTGTTCGATaGTGGGTTGCAGGGGAGACTCCACGGGTTTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: SNRFKFLHQFVR*WVAGETPRVSP Trigger: GGGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATGCAAAAACTTGAATCTGTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR GCA 72 bp | ATTCAAGTTTTTGCATCAGTTTGTTCGATGATGGGTTaGAGGGGAGACTCCACGGGTTTCTCCCTTCTCGTT | + |
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Preference number: 3 (lower is better) Translates to: IQVFASVCSMMG*RGDSTGFSLLV Trigger: AACGAGAAGGGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATGCAAAAACTTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| 3UTR CCA 72 bp | CAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTaGTCCTCATCTTATTTCAGTAACAGATTCAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QCLAQFISTHPP*SSSYFSNRFKF Trigger: AAACTTGAATCTGTTACTGAAATAAGATGAGGACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGAGTCACCGCGGCCATaGAGGGCTGCTGGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGESPRP*RAAGPC Trigger: ACATGGCCCAGCAGCCCTTCATGGCCGCGGTGACTC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATCCACCTCGGCCCGCTaGTCCGCGGCCTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSSTSAR*SAASSV Trigger: CACCGAGGAGGCCGCGGAGCAGCGGGCCGAGGTGGA...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGGTGAGAGGAGACTGTaGCCTGGGTCCAGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGGERRL*PGSRLA Trigger: AGCCAGCCTGGACCCAGGCCACAGTCTCCTCTCACC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGGTGAGAGGAGACTGTaGCCTGGGTCCAGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPGERRL*PGSRLA Trigger: AGCCAGCCTGGACCCAGGCCACAGTCTCCTCTCACC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCAGACACGGACCTCCGTaGCCAAGTTGGAGCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPRHGPP*PSWSLG Trigger: GCCTAGGCTCCAACTTGGTCACGGAGGTCCGTGTCT...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGACCACCATTGCAGATaGGAACCGGGAGGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGDHHCR*EPGGVG Trigger: TCCCACACCTCCCGGTTCCCATCTGCAATGGTGGTC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCATGGCCAGCTTCTGCCTaGACGCCTCTTCCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAWPASA*TPLPSG Trigger: GCCGGAAGGAAGAGGCGTTCAGGCAGAAGCTGGCCA...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGCACTCAGGAGTTCTTaGTGGAGCGACGTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGALRSS*WSDVSL Trigger: CAAGCTCACGTCGCTCCAGCAAGAACTCCTGAGTGC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCACAGGTGTCCTCCGACTaGCCAGGCCCCTGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSQVSSD*PGPWFC Trigger: ACAGAACCAGGGGCCTGGGCAGTCGGAGGACACCTG...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGCCTGGTACAAAATTTaGTGGGATGCGGGCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGAWYKI*WDAGPH Trigger: ATGGGGGCCCGCATCCCAGCAAATTTTGTACCAGGC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGGTGGAGAGGAGCTTaGCTGATGGTGAGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAGWRGA*LMVRGA Trigger: GGCTCCCCTCACCATCAGCCAAGCTCCTCTCCACCC...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGTGAGAGGAGACTGTaGCCTGGGTCCAGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAGERRL*PGSRLA Trigger: AGCCAGCCTGGACCCAGGCCACAGTCTCCTCTCACC...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGGCCATGTGACTGCCTaGGCTCTGCTGCATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGGHVTA*ALLHEG Trigger: CCCCTCATGCAGCAGAGCCCAGGCAGTCACATGGCC...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGACCACCATTGCAGATaGGAACCGGGAGGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPDHHCR*EPGGVG Trigger: TCCCACACCTCCCGGTTCCCATCTGCAATGGTGGTC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATCAGCACTTCCTTGGTaGCTCCGGAGCTCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSSALPW*LRSSAG Trigger: CCCTGCTGAGCTCCGGAGTCACCAAGGAAGTGCTGA...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGTTGTAGCGCACTCCTaGCATCTTGTTGGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGVVAHS*HLVGWR Trigger: TCTCCACCCAACAAGATGTCAGGAGTGCGCTACAAC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGCCTGGTACAAAATTTaGTGGGATGCGGGCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPAWYKI*WDAGPH Trigger: ATGGGGGCCCGCATCCCAGCAAATTTTGTACCAGGC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAAACTCCTCCAAGGCCTaGATCAGCACTTCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGNSSKA*ISTSLV Trigger: CACCAAGGAAGTGCTGATCCAGGCCTTGGAGGAGTT...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGGTTGTGCGTCTGGTTaGAGCTATAGGCATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGGCASG*SYRHPW Trigger: CCATGGATGCCTATAGCTCCAACCAGACGCACAACC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACGGGTGGAGAGGAGCTTaGCTGATGGTGAGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDGWRGA*LMVRGA Trigger: GGCTCCCCTCACCATCAGCCAAGCTCCTCTCCACCC...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAACTGGCTGGTCACCATaGCACTGTTACCATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGTGWSP*HCYHGD Trigger: GTCACCATGGTAACAGTGCCATGGTGACCAGCCAGT...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGATTGCTGGGGATTGTaGTGGGAGAGGCTGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGDCWGL*WERLWI Trigger: TATCCACAGCCTCTCCCACCACAATCCCCAGCAATC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGGGACACCCTGGGCTTaGGAGGTGTTGAGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGGTPWA*EVLRLC Trigger: ACAGAGCCTCAACACCTCCCAAGCCCAGGGTGTCCC...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGGACACCCTGGGCTTaGGAGGTGTTGAGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAGTPWA*EVLRLC Trigger: ACAGAGCCTCAACACCTCCCAAGCCCAGGGTGTCCC...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCATGACCGGGACACCCTaGGCTTGGGAGGTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALMTGTP*AWEVLR Trigger: CCTCAACACCTCCCAAGCCCAGGGTGTCCCGGTCAT...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACGGCCATGTGACTGCCTaGGCTCTGCTGCATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDGHVTA*ALLHEG Trigger: CCCCTCATGCAGCAGAGCCCAGGCAGTCACATGGCC...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGGCCATGTGACTGCCTaGGCTCTGCTGCATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQGHVTA*ALLHEG Trigger: CCCCTCATGCAGCAGAGCCCAGGCAGTCACATGGCC...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGCGCCTGGAGCTCTTTaGGGATGGGAGGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGAPGAL*GWEECH Trigger: ATGACACTCCTCCCATCCTCAAAGAGCTCCAGGCGC...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCATATTCGTCAAGGTGCTaGCGGGAGGCAGTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAYSSRC*REAVLL Trigger: GAGGAGGACTGCCTCCCGTCAGCACCTTGACGAATA...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGGTGTTGAGGCTCTGTaGAATGGCCATGACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPGVEAL*NGHDSR Trigger: TCTGGAGTCATGGCCATTGCACAGAGCCTCAACACC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAAAGCGGCCCTTGGCGTaGCCATTGGTGAGAGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGKRPLA*PLVRVW Trigger: CCATACTCTCACCAATGGCCACGCCAAGGGCCGCTT...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAAAGCGGCCCTTGGCGTaGCCATTGGTGAGAGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAKRPLA*PLVRVW Trigger: CCATACTCTCACCAATGGCCACGCCAAGGGCCGCTT...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCGGCGCATCTTCTTGTTaGTGGGCTCGGAGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALGASSC*WARSRC Trigger: ACACCTGCTCCGAGCCCACCAACAAGAAGATGCGCC...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGCTAGGCCGTGGGCTTTaGAAGGGGAGACCCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQLGRGL*KGRPLV Trigger: AACGAGGGGTCTCCCCTTCCAAAGCCCACGGCCTAG...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGATTGCTGGGGATTGTaGTGGGAGAGGCTGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPDCWGL*WERLWI Trigger: TATCCACAGCCTCTCCCACCACAATCCCCAGCAATC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACATGACCGGGACACCCTaGGCTTGGGAGGTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDMTGTP*AWEVLR Trigger: CCTCAACACCTCCCAAGCCCAGGGTGTCCCGGTCAT...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGATGGCGTGGCCATTGGTaGGAGTATGGAAAACCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGWRGHW*EYGKPA Trigger: AGCCGGTTTTCCATACTCTCACCAATGGCCACGCCA...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGCACTGTTACCATGGTaGCTGATTGTCGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGALLPW*LIVEEE Trigger: TTCCTCTTCGACAATCAGTCACCATGGTAACAGTGC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTGGGAGTTCTGTAGCTaGGTCACCGCGGCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQWEFCS*VTAAMK Trigger: CTTCATGGCCGCGGTGACTCAGCTACAGAACTCCCA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCAGCACTCAGGAGTTCTTaGTGGAGCGACGTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSALRSS*WSDVSL Trigger: CAAGCTCACGTCGCTCCAGCAAGAACTCCTGAGTGC...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATCCATGGCCAGCTTCTaGCTGAACGCCTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSSMASF*LNASSF Trigger: GAAGGAAGAGGCGTTCAGGCAGAAGCTGGCCATGGA...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCACTGGCTGGGGAGACTTaGTGTAAAACCGACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLALAGET*CKTDWL Trigger: CAGCCAGTCGGTTTTACAGCAAGTCTCCCCAGCCAG...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCCTCAGGAGTTCTTGCTaGAGCGACGTGAGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALLRSSC*SDVSLD Trigger: GTCCAAGCTCACGTCGCTCCAGCAAGAACTCCTGAG...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGCATCTTCTTGTTGGTaGGCTCGGAGCAGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAASSCW*ARSRCP Trigger: AGGACACCTGCTCCGAGCCCACCAACAAGAAGATGC...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGATGGTACAAAATTTGCTaGGATGCGGGCCCCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGWYKIC*DAGPHL Trigger: TAAATGGGGGCCCGCATCCCAGCAAATTTTGTACCA...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGTAAAACCGACTGGCTaGTCACCATGGCACTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPVKPTG*SPWHCY Trigger: GTAACAGTGCCATGGTGACCAGCCAGTCGGTTTTAC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGATCACCAGGCTTGCAGTaGACACTGTTTACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRWPSASQCPRPGPQGSPGLQ*TLFTGR Trigger: TCTTCCAGTAAACAGTGTCCACTGCAAGCCTGGTGA...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTGGCGTGGCCATTGGTaGGAGTATGGAAAACCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDWRGHW*EYGKPA Trigger: AGCCGGTTTTCCATACTCTCACCAATGGCCACGCCA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCGTTGTAGCGCACTCCTaGCATCTTGTTGGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALVVAHS*HLVGWR Trigger: TCTCCACCCAACAAGATGTCAGGAGTGCGCTACAAC...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCCGGAGGATCTCCCGTTaGTTTCTGACGTACCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALRRISR*FLTYQV Trigger: CACTTGGTACGTCAGAAAGCAACGGGAGATCCTCCG...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCACGGAGGATCTCCCGTTaGTTTCTGACGTACCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLARRISR*FLTYQV Trigger: CACTTGGTACGTCAGAAAGCAACGGGAGATCCTCCG...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACGCCTGGTACAAAATTTaGTGGGATGCGGGCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDAWYKI*WDAGPH Trigger: ATGGGGGCCCGCATCCCAGCAAATTTTGTACCAGGC...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCAGGGGAGACCCCTCGTTaGAAACATTCTGCCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSGETPR*KHSALL Trigger: TAACAGGGCAGAATGTTTGCAACGAGGGGTCTCCCC...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCGGGGAGACCCCTCGTTaGAAACATTCTGCCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALGETPR*KHSALL Trigger: TAACAGGGCAGAATGTTTGCAACGAGGGGTCTCCCC...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCCCCGACACTGTGATCTaGATTTTACTGTCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPPDTVI*ILLSGE Trigger: CTCACCTGACAGTAAAATGCAGATCACAGTGTCGGG...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 59% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCGGTGTTGAGGCTCTGTaGAATGGCCATGACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALGVEAL*NGHDSR Trigger: TCTGGAGTCATGGCCATTGCACAGAGCCTCAACACC...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAAACTCCTCCAAGGCCTaGATCAGCACTTCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGNSSKA*ISTSLV Trigger: CACCAAGGAAGTGCTGATCCAGGCCTTGGAGGAGTT...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTCGGTGTTGAGCGCCTaGAGCTCTTTGAGGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDSVLSA*SSLRMG Trigger: TCCCATCCTCAAAGAGCTCCAGGCGCTCAACACCGA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGTTGTGCGTCTGGTTaGAGCTATAGGCATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAGCASG*SYRHPW Trigger: CCATGGATGCCTATAGCTCCAACCAGACGCACAACC...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCACTGGCTGGTCACCATaGCACTGTTACCATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALTGWSP*HCYHGD Trigger: GTCACCATGGTAACAGTGCCATGGTGACCAGCCAGT...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCTGCTGTAAAACCGACTaGCTGGTCACCATGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALCCKTD*LVTMAL Trigger: CAGTGCCATGGTGACCAGCCAGTCGGTTTTACAGCA...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGATGCTGTAAAACCGACTaGCTGGTCACCATGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGCCKTD*LVTMAL Trigger: CAGTGCCATGGTGACCAGCCAGTCGGTTTTACAGCA...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCTGCTGGGGATTGTGGTaGGAGAGGCTGTGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALCWGLW*ERLWIF Trigger: GAATATCCACAGCCTCTCCCACCACAATCCCCAGCA...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGCTGGGGATTGTGGTaGGAGAGGCTGTGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSCWGLW*ERLWIF Trigger: GAATATCCACAGCCTCTCCCACCACAATCCCCAGCA...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAGTCGTCGCCGTCCTCTaGGCCCTCGTCCCCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQVVAVL*ALVPRQ Trigger: TTGTCTGGGGACGAGGGCTCAGAGGACGGCGACGAC...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTCTCCCGTTGCTTTCTaGCGTACCAAGTGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQSPVAF*RTKCTG Trigger: CCCTGTACACTTGGTACGTCAGAAAGCAACGGGAGA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACGGCCCCTGGTTCTGTTaGCTGAACTCTGGAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDGPWFC*LNSGKR Trigger: TCTCTTTCCAGAGTTCAGTCAACAGAACCAGGGGCC...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
||
| CDS-3UTR TCA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATTGTCGAAGAGGAAGTaGCCTCATTGTTTCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGPPLGDTRALGILGEPSLSKRK*PHCFPA Trigger: AGCCGGGAAACAATGAGGTCACTTCCTCTTCGACAA...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGTCATGATGAGGTTCTaGGATTGCTGGGGATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGVMMRF*DCWGLW Trigger: CCACAATCCCCAGCAATCTCAGAACCTCATCATGAC...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTTCCACCTCGGCCCGCTaGTCCGCGGCCTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGSTSAR*SAASSV Trigger: CACCGAGGAGGCCGCGGAGCAGCGGGCCGAGGTGGA...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGCGGAGGATCTCCCGTTaGTTTCTGACGTACCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQRRISR*FLTYQV Trigger: CACTTGGTACGTCAGAAAGCAACGGGAGATCCTCCG...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGCAGCTGATCCTGACTaGTTTTGTCTGTCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPAADPD*FCLSCF Trigger: GAAACATGACAGACAAAAGCAGTCAGGATCAGCTGC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTTCCTTCCGGCGGTTTaGGAACCAGTTGTAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQFLPAV*EPVVDT Trigger: CGTGTCTACAACTGGTTCGCAAACCGCCGGAAGGAA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGATCTGTGACCACCATTaGAGATGGGAACCGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQICDHH*RWEPGG Trigger: ACCTCCCGGTTCCCATCTGCAATGGTGGTCACAGAT...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACCTCCTGACATCTTGTTaGGTGGAGAGGAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDLLTSC*VERSLA Trigger: AGCCAAGCTCCTCTCCACCCAACAAGATGTCAGGAG...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTGCTGTAAAACCGACTaGCTGGTCACCATGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQCCKTD*LVTMAL Trigger: CAGTGCCATGGTGACCAGCCAGTCGGTTTTACAGCA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTGGTGGGAGAGGCTGTaGATATTCGTCAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDWWERL*IFVKVL Trigger: CAGCACCTTGACGAATATCCACAGCCTCTCCCACCA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTGGTGGGAGAGGCTGTaGATATTCGTCAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQWWERL*IFVKVL Trigger: CAGCACCTTGACGAATATCCACAGCCTCTCCCACCA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTTGCATGTATCCCTTaGTCATTTTGGCAGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQVACIP*SFWQPS Trigger: GGAGGGCTGCCAAAATGATCAAGGGATACATGCAAC...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTTGGCCAGCTTCTGCCTaGACGCCTCTTCCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSWPASA*TPLPSG Trigger: GCCGGAAGGAAGAGGCGTTCAGGCAGAAGCTGGCCA...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAGAGGGGAGCCATGGGTaGGCAGGGGGTTCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQEGSHG*AGGSGC Trigger: ACAACCTGAACCCCCTGCTCACCCATGGCTCCCCTC...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCGCACTGTTACCATGGTaGCTGATTGTCGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGTAYLRCLAGCQVSRALALLPW*LIVEEE Trigger: TTCCTCTTCGACAATCAGTCACCATGGTAACAGTGC...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACGTCATGATGAGGTTCTaGGATTGCTGGGGATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDVMMRF*DCWGLW Trigger: CCACAATCCCCAGCAATCTCAGAACCTCATCATGAC...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGGAGTCACCGCGGCCATaGAGGGCTGCTGGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKESPRP*RAAGPC Trigger: ACATGGCCCAGCAGCCCTTCATGGCCGCGGTGACTC...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCATCGTTGCAAACATTCTaGCCTGTTACACTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLASLQTF*PVTLLH Trigger: GTGGAGGAGTGTAACAGGGCAGAATGTTTGCAACGA...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGATGGTACAAAATTTGCTaGGATGCGGGCCCCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSAAGPPLGDTRALGILGWYKIC*DAGPHL Trigger: TAAATGGGGGCCCGCATCCCAGCAAATTTTGTACCA...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGGTGGAGAGGAGCTTaGCTGATGGTGAGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSGWRGA*LMVRGA Trigger: GGCTCCCCTCACCATCAGCCAAGCTCCTCTCCACCC...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACGTAAAACCGACTGGCTaGTCACCATGGCACTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDVKPTG*SPWHCY Trigger: GTAACAGTGCCATGGTGACCAGCCAGTCGGTTTTAC...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCATCACCAGGCTTGCAGTaGACACTGTTTACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLASPGLQ*TLFTGR Trigger: TCTTCCAGTAAACAGTGTCCACTGCAAGCCTGGTGA...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTGGCCAGCTTCTGCCTaGACGCCTCTTCCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSWPASA*TPLPSG Trigger: GCCGGAAGGAAGAGGCGTTCAGGCAGAAGCTGGCCA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGGAGGGGAGCCATGGGTaGGCAGGGGGTTCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKEGSHG*AGGSGC Trigger: ACAACCTGAACCCCCTGCTCACCCATGGCTCCCCTC...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGGGATATTGTGCTGTTaGATGTATCCCTTGATCATT | + |
|
Preference number: 4 (lower is better) Translates to: CPRPGPQGARGILLPLCPGILCC*MYPLII Trigger: AATGATCAAGGGATACATGCAACAGCACAATATCCC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGCAGGTGTCCTCCGACTaGCCAGGCCCCTGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKQVSSD*PGPWFC Trigger: ACAGAACCAGGGGCCTGGGCAGTCGGAGGACACCTG...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTCGTTGCAAACATTCTaGCCTGTTACACTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARLWGTQEHLASWESHHDSLQTF*PVTLLH Trigger: GTGGAGGAGTGTAACAGGGCAGAATGTTTGCAACGA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAATGTTTCCAGAGCTCTaGACTGTCTGGTTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAMFPEL*TVWLNC Trigger: ACAGTTCAACCAGACAGTCCAGAGCTCTGGAAACAT...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTCTAGGCCGTGGGCTTTaGAAGGGGAGACCCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSLGRGL*KGRPLV Trigger: AACGAGGGGTCTCCCCTTCCAAAGCCCACGGCCTAG...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAATGACCGGGACACCCTaGGCTTGGGAGGTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQMTGTP*AWEVLR Trigger: CCTCAACACCTCCCAAGCCCAGGGTGTCCCGGTCAT...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTCAGCACTTCCTTGGTaGCTCCGGAGCTCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSSALPW*LRSSAG Trigger: CCCTGCTGAGCTCCGGAGTCACCAAGGAAGTGCTGA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTAGACACGGACCTCCGTaGCCAAGTTGGAGCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSRHGPP*PSWSLG Trigger: GCCTAGGCTCCAACTTGGTCACGGAGGTCCGTGTCT...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGAGACACGGACCTCCGTaGCCAAGTTGGAGCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKRHGPP*PSWSLG Trigger: GCCTAGGCTCCAACTTGGTCACGGAGGTCCGTGTCT...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTGAGTCACCGCGGCCATaGAGGGCTGCTGGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGESPRP*RAAGPC Trigger: ACATGGCCCAGCAGCCCTTCATGGCCGCGGTGACTC...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTAGGGCAGCTCTCTTCTaGGTCTTCATGGGGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSRAALF*VFMGVP Trigger: GGGCACCCCCATGAAGACCCAGAAGAGAGCTGCCCT...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGCGCATCTTCTTGTTaGTGGGCTCGGAGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSGASSC*WARSRC Trigger: ACACCTGCTCCGAGCCCACCAACAAGAAGATGCGCC...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTCTAGGCCGTGGGCTTTaGAAGGGGAGACCCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSLGRGL*KGRPLV Trigger: AACGAGGGGTCTCCCCTTCCAAAGCCCACGGCCTAG...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTGCGCCTGGAGCTCTTTaGGGATGGGAGGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSAPGAL*GWEECH Trigger: ATGACACTCCTCCCATCCTCAAAGAGCTCCAGGCGC...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGTATTCGTCAAGGTGCTaGCGGGAGGCAGTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKYSSRC*REAVLL Trigger: GAGGAGGACTGCCTCCCGTCAGCACCTTGACGAATA...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTGGGAGTTCTGTAGCTaGGTCACCGCGGCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSWEFCS*VTAAMK Trigger: CTTCATGGCCGCGGTGACTCAGCTACAGAACTCCCA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTGGCCCCTGGTTCTGTTaGCTGAACTGTCGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSGPWFC*LNCRRI Trigger: GATCCTCCGACAGTTCAGTCAACAGAACCAGGGGCC...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAACTGGCTGGGGAGACTTaGTGTAAAACCGACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQLAGET*CKTDWL Trigger: CAGCCAGTCGGTTTTACAGCAAGTCTCCCCAGCCAG...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTCTGGCTGGGGAGACTTaGTGTAAAACCGACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSLAGET*CKTDWL Trigger: CAGCCAGTCGGTTTTACAGCAAGTCTCCCCAGCCAG...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTCTCAGGAGTTCTTGCTaGAGCGACGTGAGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSLRSSC*SDVSLD Trigger: GTCCAAGCTCACGTCGCTCCAGCAAGAACTCCTGAG...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAATCGGTGTTGAGCGCCTaGAGCTCTTTGAGGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQSVLSA*SSLRMG Trigger: TCCCATCCTCAAAGAGCTCCAGGCGCTCAACACCGA...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGGGCGCATCTTCTTGTTaGTGGGCTCGGAGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKGASSC*WARSRC Trigger: ACACCTGCTCCGAGCCCACCAACAAGAAGATGCGCC...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAATTCCTTCCGGCGGTTTaGGAACCAGTTGTAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQFLPAV*EPVVDT Trigger: CGTGTCTACAACTGGTTCGCAAACCGCCGGAAGGAA...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGTCCATGGCCAGCTTCTaGCTGAACGCCTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKSMASF*LNASSF Trigger: GAAGGAAGAGGCGTTCAGGCAGAAGCTGGCCATGGA...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAGGTGTTGAGGCTCTGTaGAATGGCCATGACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQGVEAL*NGHDSR Trigger: TCTGGAGTCATGGCCATTGCACAGAGCCTCAACACC...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTAGGGCAGCTCTCTTCTaGGTCTTCATGGGGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGRAALF*VFMGVP Trigger: GGGCACCCCCATGAAGACCCAGAAGAGAGCTGCCCT...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAACCCTCTCTTCCTTGCTaGGATTCTTTTGCCGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQPSLPC*DSFAGR Trigger: ACGACCGGCAAAAGAATCCCAGCAAGGAAGAGAGGG...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAGGTTGTGCGTCTGGTTaGAGCTATAGGCATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQGCASG*SYRHPW Trigger: CCATGGATGCCTATAGCTCCAACCAGACGCACAACC...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAACTCCTGACATCTTGTTaGGTGGAGAGGAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQLLTSC*VERSLA Trigger: AGCCAAGCTCCTCTCCACCCAACAAGATGTCAGGAG...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTCTCCTGACATCTTGTTaGGTGGAGAGGAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSLLTSC*VERSLA Trigger: AGCCAAGCTCCTCTCCACCCAACAAGATGTCAGGAG...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTACTGGCTGGTCACCATaGCACTGTTACCATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSTGWSP*HCYHGD Trigger: GTCACCATGGTAACAGTGCCATGGTGACCAGCCAGT...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTGGGACACCCTGGGCTTaGGAGGTGTTGAGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGGTPWA*EVLRLC Trigger: ACAGAGCCTCAACACCTCCCAAGCCCAGGGTGTCCC...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTCTCCCGTTGCTTTCTaGCGTACCAAGTGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSSPVAF*RTKCTG Trigger: CCCTGTACACTTGGTACGTCAGAAAGCAACGGGAGA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTGGCCCCTGGTTCTGTTaGCTGAACTCTGGAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSGPWFC*LNSGKR Trigger: TCTCTTTCCAGAGTTCAGTCAACAGAACCAGGGGCC...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTGTTGTAGCGCACTCCTaGCATCTTGTTGGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSVVAHS*HLVGWR Trigger: TCTCCACCCAACAAGATGTCAGGAGTGCGCTACAAC...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTTATTCGTCAAGGTGCTaGCGGGAGGCAGTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGYSSRC*REAVLL Trigger: GAGGAGGACTGCCTCCCGTCAGCACCTTGACGAATA...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAGTCATGATGAGGTTCTaGGATTGCTGGGGATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQVMMRF*DCWGLW Trigger: CCACAATCCCCAGCAATCTCAGAACCTCATCATGAC...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTTGGGAGTTCTGTAGCTaGGTCACCGCGGCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGWEFCS*VTAAMK Trigger: CTTCATGGCCGCGGTGACTCAGCTACAGAACTCCCA...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTTCCTTCCGGCGGTTTaGGAACCAGTTGTAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSFLPAV*EPVVDT Trigger: CGTGTCTACAACTGGTTCGCAAACCGCCGGAAGGAA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGATCTGTGACCACCATTaGAGATGGGAACCGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKICDHH*RWEPGG Trigger: ACCTCCCGGTTCCCATCTGCAATGGTGGTCACAGAT...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGCCCTCTCTTCCTTGCTaGGATTCTTTTGCCGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKPSLPC*DSFAGR Trigger: ACGACCGGCAAAAGAATCCCAGCAAGGAAGAGAGGG...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGTGGTGGGAGAGGCTGTaGATATTCGTCAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKWWERL*IFVKVL Trigger: CAGCACCTTGACGAATATCCACAGCCTCTCCCACCA...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTGCTGGGGATTGTGGTaGGAGAGGCTGTGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSCWGLW*ERLWIF Trigger: GAATATCCACAGCCTCTCCCACCACAATCCCCAGCA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTGTTGCATGTATCCCTTaGTCATTTTGGCAGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSVACIP*SFWQPS Trigger: GGAGGGCTGCCAAAATGATCAAGGGATACATGCAAC...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTTGTCGAAGAGGAAGTaGCCTCATTGTTTCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSLSKRK*PHCFPA Trigger: AGCCGGGAAACAATGAGGTCACTTCCTCTTCGACAA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAATCGTTGCAAACATTCTaGCCTGTTACACTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGHKSTWHLGRAIMTILQSLQTF*PVTLLH Trigger: GTGGAGGAGTGTAACAGGGCAGAATGTTTGCAACGA...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTTCCATGGCCAGCTTCTaGCTGAACGCCTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGSMASF*LNASSF Trigger: GAAGGAAGAGGCGTTCAGGCAGAAGCTGGCCATGGA...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTCCCGACACTGTGATCTaGATTTTACTGTCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PETDGVENGVLVAVHRVSPDTVI*ILLSGE Trigger: CTCACCTGACAGTAAAATGCAGATCACAGTGTCGGG...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTCCATTGGTGAGAGTATaGAAAACCGGCTTGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSPLVRV*KTGLVS Trigger: CGACACCAAGCCGGTTTTCCATACTCTCACCAATGG...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTGCATCTTCTTGTTGGTaGGCTCGGAGCAGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGASSCW*ARSRCP Trigger: AGGACACCTGCTCCGAGCCCACCAACAAGAAGATGC...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGGTAAAACCGACTGGCTaGTCACCATGGCACTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKVKPTG*SPWHCY Trigger: GTAACAGTGCCATGGTGACCAGCCAGTCGGTTTTAC...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTATCTGTGACCACCATTaGAGATGGGAACCGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGICDHH*RWEPGG Trigger: ACCTCCCGGTTCCCATCTGCAATGGTGGTCACAGAT...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGTCACCAGGCTTGCAGTaGACACTGTTTACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKSPGLQ*TLFTGR Trigger: TCTTCCAGTAAACAGTGTCCACTGCAAGCCTGGTGA...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| 3UTR CAA 72 bp | GATTCAAGTTTTTGCATCAGTTTGTTCGATGATGGGTaGCAGGGGAGACTCCACGGGTTTCTCCCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSFCISLFDDG*QGRLHGFLPSR Trigger: ACGAGAAGGGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATGCAAAAACTTGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTTTGTCGAAGAGGAAGTaGCCTCATTGTTTCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGLSKRK*PHCFPA Trigger: AGCCGGGAAACAATGAGGTCACTTCCTCTTCGACAA...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTGCAGCTGATCCTGACTaGTTTTGTCTGTCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVENGVLVAVHRVSGYVSAADPD*FCLSCF Trigger: GAAACATGACAGACAAAAGCAGTCAGGATCAGCTGC...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
||
| CDS-3UTR CCA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGATGTTTCCAGAGCTCTaGACTGTCTGGTTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEHLASWESHHDNTAKMFPEL*TVWLNC Trigger: ACAGTTCAACCAGACAGTCCAGAGCTCTGGAAACAT...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTCCCGACACTGTGATCTaGATTTTACTGTCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGPDTVI*ILLSGE Trigger: CTCACCTGACAGTAAAATGCAGATCACAGTGTCGGG...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS GCA 90 bp | GCCCTCCACGGGTCCTCGCTGAGCATCCGGTCCACCTCGGCCCGCTaGTCCGCGGCCTCCTCGGTGTTGAGCGCCTGGAGCTCTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALHGSSLSIRSTSAR*SAASSVLSAWSSLR Trigger: CCTCAAAGAGCTCCAGGCGCTCAACACCGAGGAGGCCGCGGAGCAGCGGGCCGAGGTGGACCGGATGCTCAGCGAGGACCCGTGGAGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGACGGGACACCCTGGGCTaGGGAGGTGTTGAGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFLRWPSASQCPRPGPQGRDTLG*GGVEAL Trigger: CAGAGCCTCAACACCTCCCAAGCCCAGGGTGTCCCG...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCCGGGACACCCTGGGCTaGGGAGGTGTTGAGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPRPGPQGARGILLPLCPRDTLG*GGVEAL Trigger: CAGAGCCTCAACACCTCCCAAGCCCAGGGTGTCCCG...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCACCTCCGTGACCAAGTaGGAGCCTAGGCCGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPRPGPQGARGILLPLCPTSVTK*EPRPWA Trigger: AGCCCACGGCCTAGGCTCCAACTTGGTCACGGAGGT...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGATGGGCTTGGGAGGTGTaGAGGCTCTGTGCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GFLRWPSASQCPRPGPQGWAWEV*RLCAMA Trigger: GGCCATTGCACAGAGCCTCAACACCTCCCAAGCCCA...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGGCACTCAGGAGTTCTaGCTGGAGCGACGTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GFLRWPSASQCPRPGPQGGTQEF*LERREL Trigger: AAGCTCACGTCGCTCCAGCAAGAACTCCTGAGTGCC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCGGCCTGGTACAAAATTaGCTGGGATGCGGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPRPGPQGARGILLPLCPGLVQN*LGCGPP Trigger: TGGGGGCCCGCATCCCAGCAAATTTTGTACCAGGCC...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGACCTAGGCCGTGGGCTTaGGAAGGGGAGACCCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HSAAGPPLGDTRALGILGPRPWA*EGETPR Trigger: ACGAGGGGTCTCCCCTTCCAAAGCCCACGGCCTAGG...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAAGCAGGGGGTTCAGGTaGTGCGTCTGGTTGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GFLRWPSASQCPRPGPQGSRGFR*CVWLEL Trigger: TAGCTCCAACCAGACGCACAACCTGAACCCCCTGCT...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCTGGGCTTGGGAGGTGTaGAGGCTCTGTGCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPRPGPQGARGILLPLCPWAWEV*RLCAMA Trigger: GGCCATTGCACAGAGCCTCAACACCTCCCAAGCCCA...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCCGGGACACCCTGGGCTaGGGAGGTGTTGAGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGTAYLRCLAGCQVSRALRDTLG*GGVEAL Trigger: CAGAGCCTCAACACCTCCCAAGCCCAGGGTGTCCCG...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCACCAGACAAGCGGCCCTaGGCGTGGCCATTGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAPDKRP*AWPLVR Trigger: TCTCACCAATGGCCACGCCAAGGGCCGCTTGTCTGG...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGCGGCCTCCTCGGTGTaGAGCGCCTGGAGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQAASSV*SAWSSL Trigger: CAAAGAGCTCCAGGCGCTCAACACCGAGGAGGCCGC...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGACGGCGCATCTTCTTGTaGGTGGGCTCGGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSAAGPPLGDTRALGILGRRIFL*VGSEQV Trigger: CACCTGCTCCGAGCCCACCAACAAGAAGATGCGCCG...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACCCTAGGCCGTGGGCTTaGGAAGGGGAGACCCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: ARLWGTQEHLASWESHHDPRPWA*EGETPR Trigger: ACGAGGGGTCTCCCCTTCCAAAGCCCACGGCCTAGG...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCACCTCCGTGACCAAGTaGGAGCCTAGGCCGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTAYLRCLAGCQVSRALTSVTK*EPRPWA Trigger: AGCCCACGGCCTAGGCTCCAACTTGGTCACGGAGGT...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAACCTCCGTGACCAAGTaGGAGCCTAGGCCGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLATSVTK*EPRPWA Trigger: AGCCCACGGCCTAGGCTCCAACTTGGTCACGGAGGT...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS CCA 90 bp | TCGCCGTCCTCTGAGCCCTCGTCCCCAGACAAGCGGCCCTTGGCGTaGCCATTGGTGAGAGTATGGAAAACCGGCTTGGTGTCGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSEPSSPDKRPLA*PLVRVWKTGLVSRS Trigger: GGATCTCGACACCAAGCCGGTTTTCCATACTCTCACCAATGGCCACGCCAAGGGCCGCTTGTCTGGGGACGAGGGCTCAGAGGACGGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGCCAGACAAGCGGCCCTaGGCGTGGCCATTGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQPDKRP*AWPLVR Trigger: TCTCACCAATGGCCACGCCAAGGGCCGCTTGTCTGG...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGATCCCTCTGGGGGATATaGTGCTGTTGCATGTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GFLRWPSASQCPRPGPQGSLWGI*CCCMYP Trigger: GGGATACATGCAACAGCACAATATCCCCCAGAGGGA...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCATTGCGGCGCATCTTCTaGTTGGTGGGCTCGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLALRRIF*LVGSEQ Trigger: CTGCTCCGAGCCCACCAACAAGAAGATGCGCCGCAA...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCAGGCCTGGTACAAAATTaGCTGGGATGCGGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGPPLGDTRALGILGEPSGLVQN*LGCGPP Trigger: TGGGGGCCCGCATCCCAGCAAATTTTGTACCAGGCC...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGGCCTGGTACAAAATTaGCTGGGATGCGGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSAAGPPLGDTRALGILGGLVQN*LGCGPP Trigger: TGGGGGCCCGCATCCCAGCAAATTTTGTACCAGGCC...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCAGGGGAGACCCCTCGTaGCAAACATTCTGCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPRPGPQGARGILLPLCPRGDPS*QTFCPV Trigger: AACAGGGCAGAATGTTTGCAACGAGGGGTCTCCCCT...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCAAGCGCCTGGAGCTCTTaGAGGATGGGAGGAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGPPLGDTRALGILGEPSSAWSS*RMGGVS Trigger: TGACACTCCTCCCATCCTCAAAGAGCTCCAGGCGCT...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAAGCGCCTGGAGCTCTTaGAGGATGGGAGGAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLASAWSS*RMGGVS Trigger: TGACACTCCTCCCATCCTCAAAGAGCTCCAGGCGCT...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCGCCCAGGCCCACAGGGAGCTAGGGGCATCTTGCTGCCATTATGCCCCTCCCTCTGGGGGATATaGTGCTGTTGCATGTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPRPGPQGARGILLPLCPSLWGI*CCCMYP Trigger: GGGATACATGCAACAGCACAATATCCCCCAGAGGGA...GGGGCATAATGGCAGCAAGATGCCCCTAGCTCCCTGTGGGCCTGGGCGGGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTTGCGGCGCATCTTCTaGTTGGTGGGCTCGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARLWGTQEHLASWESHHDLRRIF*LVGSEQ Trigger: CTGCTCCGAGCCCACCAACAAGAAGATGCGCCGCAA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAAGCAGGGGGTTCAGGTaGTGCGTCTGGTTGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLASRGFR*CVWLEL Trigger: TAGCTCCAACCAGACGCACAACCTGAACCCCCTGCT...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACTGGGCTTGGGAGGTGTaGAGGCTCTGTGCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARLWGTQEHLASWESHHDWAWEV*RLCAMA Trigger: GGCCATTGCACAGAGCCTCAACACCTCCCAAGCCCA...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS CCA 90 bp | AGCTTCACCCCGAAATTCGGGGACGGCAGTAACTCCTCCAAGGCCTaGATCAGCACTTCCTTGGTGACTCCGGAGCTCAGCAGGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SFTPKFGDGSNSSKA*ISTSLVTPELSRAL Trigger: GAGTGCCCTGCTGAGCTCCGGAGTCACCAAGGAAGTGCTGATCCAGGCCTTGGAGGAGTTACTGCCGTCCCCGAATTTCGGGGTGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTGGATCAGCACTTCCTaGGTGACTCCGGAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQWISTS*VTPELS Trigger: GCTGAGCTCCGGAGTCACCAAGGAAGTGCTGATCCA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATATCCCTTGATCATTTaGGCAGCCCTCCACGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGPPLGDTRALGILGEPSYPLII*AALHGS Trigger: GGACCCGTGGAGGGCTGCCAAAATGATCAAGGGATA...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCACTTGCTGGGATTCTTTaGCCGGTCGTAGGCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLALAGIL*PVVGLV Trigger: TACCAGGCCTACGACCGGCAAAAGAATCCCAGCAAG...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCCGCACTCCTGACATCTaGTTGGGTGGAGAGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGTAYLRCLAGCQVSRALRTPDI*LGGEEL Trigger: AAGCTCCTCTCCACCCAACAAGATGTCAGGAGTGCG...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCACGCACTCCTGACATCTaGTTGGGTGGAGAGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPPLGDTRALGILGEPSRTPDI*LGGEEL Trigger: AAGCTCCTCTCCACCCAACAAGATGTCAGGAGTGCG...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCTGAGATGGCCGTCAGCCAGTCAGTGTCCCCGCCCAGGCCCACAGGGAGGGGATATTGTGCTGTaGCATGTATCCCTTGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: GFLRWPSASQCPRPGPQGGDIVL*HVSLDH Trigger: ATGATCAAGGGATACATGCAACAGCACAATATCCCC...TCCCTGTGGGCCTGGGCGGGGACACTGACTGGCTGACGGCCATCTCAGGAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCATCCCTCTGGGGGATATaGTGCTGTTGCATGTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLASLWGI*CCCMYP Trigger: GGGATACATGCAACAGCACAATATCCCCCAGAGGGA...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAAGGCCCCTGGTTCTGTaGACTGAACTCTGGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLARPLVL*TELWKE Trigger: CTCTTTCCAGAGTTCAGTCAACAGAACCAGGGGCCT...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
||
| CDS-3UTR CAA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGACCCCATTTAAACCGGTaGCGGCGCATCTTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSAAGPPLGDTRALGILGPHLNR*RRIFLL Trigger: CAACAAGAAGATGCGCCGCAACCGGTTTAAATGGGG...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCACCCCATTTAAACCGGTaGCGGCGCATCTTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAPHLNR*RRIFLL Trigger: CAACAAGAAGATGCGCCGCAACCGGTTTAAATGGGG...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAGGGGAGACCCCTCGTaGCAAACATTCTGCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARLWGTQEHLASWESHHDRGDPS*QTFCPV Trigger: AACAGGGCAGAATGTTTGCAACGAGGGGTCTCCCCT...GTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCGCAGCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGATGAGGTTCTGAGATaGCTGGGGATTGTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSAAGPPLGDTRALGILGDEVLR*LGIVVG Trigger: TCCCACCACAATCCCCAGCAATCTCAGAACCTCATC...TCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGCTGCGGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGGTGAGCAGGGCCCTCGATGAGGTTCTGAGATaGCTGGGGATTGTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGTAYLRCLAGCQVSRALDEVLR*LGIVVG Trigger: TCCCACCACAATCCCCAGCAATCTCAGAACCTCATC...GAGGGCCCTGCTCACCTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAGCGGCCTCCTCGGTGTaGAGCGCCTGGAGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGHKSTWHLGRAIMTILQAASSV*SAWSSL Trigger: CAAAGAGCTCCAGGCGCTCAACACCGAGGAGGCCGC...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTCGGAGGATCTCCCGTaGCTTTCTGACGTACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQSEDLP*LSDVPS Trigger: ACTTGGTACGTCAGAAAGCAACGGGAGATCCTCCGA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTCCTAGGCCGTGGGCTTaGGAAGGGGAGACCCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSPRPWA*EGETPR Trigger: ACGAGGGGTCTCCCCTTCCAAAGCCCACGGCCTAGG...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAACGGCGCATCTTCTTGTaGGTGGGCTCGGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGHKSTWHLGRAIMTILQRRIFL*VGSEQV Trigger: CACCTGCTCCGAGCCCACCAACAAGAAGATGCGCCG...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGCTTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAATGCTGGTGAGAGTGTaGATGCTACTGGTATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLGFGLQLSGTAYLRCLAMLVRV*MLLVSV Trigger: CACAGATACCAGTAGCATCAACACTCTCACCAGCAT...TGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAAGCCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGGCTGCAGCTCTCGGGAACGGCTTATCTGAGGTGCCTGGCAGGATGTCAGTGTTGCATGTATCCCTaGATCATTTTGGCAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGLQLSGTAYLRCLAGCQCCMYP*IILAAL Trigger: GAGGGCTGCCAAAATGATCAAGGGATACATGCAACA...CTGACATCCTGCCAGGCACCTCAGATAAGCCGTTCCCGAGAGCTGCAGCCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCCGCCTCTGGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCAGGGGATATTGTGCTGTaGCATGTATCCCTTGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGPPLGDTRALGILGEPSGDIVL*HVSLDH Trigger: ATGATCAAGGGATACATGCAACAGCACAATATCCCC...TGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCCAGAGGCGGGCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTCGGCGCATCTTCTTGTaGGTGGGCTCGGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVENGVLVAVHRVSGYVSRRIFL*VGSEQV Trigger: CACCTGCTCCGAGCCCACCAACAAGAAGATGCGCCG...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTTGGATCAGCACTTCCTaGGTGACTCCGGAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSWISTS*VTPELS Trigger: GCTGAGCTCCGGAGTCACCAAGGAAGTGCTGATCCA...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTTTGCGGCGCATCTTCTaGTTGGTGGGCTCGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVENGVLVAVHRVSGYVSLRRIF*LVGSEQ Trigger: CTGCTCCGAGCCCACCAACAAGAAGATGCGCCGCAA...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTAGCAGGGGGTTCAGGTaGTGCGTCTGGTTGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSSRGFR*CVWLEL Trigger: TAGCTCCAACCAGACGCACAACCTGAACCCCCTGCT...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGGGCACTCAGGAGTTCTaGCTGGAGCGACGTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTQEHLASWESHHDNTAKGTQEF*LERREL Trigger: AAGCTCACGTCGCTCCAGCAAGAACTCCTGAGTGCC...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAACCCTTGGCGTGGCCATaGGTGAGAGTATGGAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: GGHKSTWHLGRAIMTILQPLAWP*VRVWKT Trigger: GGTTTTCCATACTCTCACCAATGGCCACGCCAAGGG...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTTATCCCTTGATCATTTaGGCAGCCCTCCACGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSYPLII*AALHGS Trigger: GGACCCGTGGAGGGCTGCCAAAATGATCAAGGGATA...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTCTTGCTGGGATTCTTTaGCCGGTCGTAGGCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSLAGIL*PVVGLV Trigger: TACCAGGCCTACGACCGGCAAAAGAATCCCAGCAAG...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS TCA 90 bp | TGCTGTAAAACCGACTGGCTGGTCACCATGGCACTGTTACCATGGTaGCTGATTGTCGAAGAGGAAGTGACCTCATTGTTTCCCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCKTDWLVTMALLPW*LIVEEEVTSLFPGW Trigger: CCAGCCGGGAAACAATGAGGTCACTTCCTCTTCGACAATCAGTCACCATGGTAACAGTGCCATGGTGACCAGCCAGTCGGTTTTACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTTCGGAGGATCTCCCGTaGCTTTCTGACGTACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSSEDLP*LSDVPS Trigger: ACTTGGTACGTCAGAAAGCAACGGGAGATCCTCCGA...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAACCCCATTTAAACCGGTaGCGGCGCATCTTCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: GGHKSTWHLGRAIMTILQPHLNR*RRIFLL Trigger: CAACAAGAAGATGCGCCGCAACCGGTTTAAATGGGG...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGCTTGCTGGGATTCTTTaGCCGGTCGTAGGCCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: GTQEHLASWESHHDNTAKLAGIL*PVVGLV Trigger: TACCAGGCCTACGACCGGCAAAAGAATCCCAGCAAG...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTCGCACTCCTGACATCTaGTTGGGTGGAGAGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: GVENGVLVAVHRVSGYVSRTPDI*LGGEEL Trigger: AAGCTCCTCTCCACCCAACAAGATGTCAGGAGTGCG...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | GGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAAGTCGGAGGATCTCCCGTaGCTTTCTGACGTACCAAGT | + |
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Preference number: 5 (lower is better) Translates to: GTQEHLASWESHHDNTAKSEDLP*LSDVPS Trigger: ACTTGGTACGTCAGAAAGCAACGGGAGATCCTCCGA...CTTTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | GGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGTTATGTGAGTAGGCCCCTGGTTCTGTaGACTGAACTCTGGAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: GVENGVLVAVHRVSGYVSRPLVL*TELWKE Trigger: CTCTTTCCAGAGTTCAGTCAACAGAACCAGGGGCCT...ACTCACATAACCACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
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| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTTGTTGCATGTATCCCTaGATCATTTTGGCAGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSCCMYP*IILAAL Trigger: GAGGGCTGCCAAAATGATCAAGGGATACATGCAACA...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTAGGGGAGACCCCTCGTaGCAAACATTCTGCCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGRGDPS*QTFCPV Trigger: AACAGGGCAGAATGTTTGCAACGAGGGGTCTCCCCT...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | GGGGGACACAAGAGCACTTGGCATCTTGGGAGAGCCATCATGACAATACTGCAAATGCTGGTGAGAGTGTaGATGCTACTGGTATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GGHKSTWHLGRAIMTILQMLVRV*MLLVSV Trigger: CACAGATACCAGTAGCATCAACACTCTCACCAGCAT...TTGCAGTATTGTCATGATGGCTCTCCCAAGATGCCAAGTGCTCTTGTGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGACTGATGGTGTGGAAAATGGGGTCCTTGTTGCTGTGCACAGAGTGAGTGGGGATATTGTGCTGTaGCATGTATCCCTTGATCAT | + |
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Preference number: 5 (lower is better) Translates to: PETDGVENGVLVAVHRVSGDIVL*HVSLDH Trigger: ATGATCAAGGGATACATGCAACAGCACAATATCCCC...ACTCACTCTGTGCACAGCAACAAGGACCCCATTTTCCACACCATCAGTCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTGATGAGGTTCTGAGATaGCTGGGGATTGTGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGDEVLR*LGIVVG Trigger: TCCCACCACAATCCCCAGCAATCTCAGAACCTCATC...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS-3UTR CAA 90 bp | TCTGTCAGTATTTACAGTGTCTGGCTCAGTTCATTAGCACACACCCTCCTTGGTATGCTGGTGAGAGTGTaGATGCTACTGGTATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SVSIYSVWLSSLAHTLLGMLVRV*MLLVSV Trigger: CACAGATACCAGTAGCATCAACACTCTCACCAGCAT...ACCAAGGAGGGTGTGTGCTAATGAACTGAGCCAGACACTGTAAATACTGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS GCA 72 bp | GGGTCCTCGCTGAGCATCCGGTCCACCTCGGCCCGCTaGTCCGCGGCCTCCTCGGTGTTGAGCGCCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GSSLSIRSTSAR*SAASSVLSAWS Trigger: GCTCCAGGCGCTCAACACCGAGGAGGCCGCGGAGCAGCGGGCCGAGGTGGACCGGATGCTCAGCGAGGACCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
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| CDS CAA 90 bp | TGGGATGCGGGCCCCCATTTAAACCGGTTGCGGCGCATCTTCTTGTaGGTGGGCTCGGAGCAGGTGTCCTCCGACTGCCCAGGCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WDAGPHLNRLRRIFL*VGSEQVSSDCPGPW Trigger: CCAGGGGCCTGGGCAGTCGGAGGACACCTGCTCCGAGCCCACCAACAAGAAGATGCGCCGCAACCGGTTTAAATGGGGGCCCGCATCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 ENSMUST00000146786.8 |
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| CDS CAA 72 bp | CCGTCCTCTGAGCCCTCGTCCCCAGACAAGCGGCCCTaGGCGTGGCCATTGGTGAGAGTATGGAAAACCGGC | + |
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Preference number: 6 (lower is better) Translates to: PSSEPSSPDKRP*AWPLVRVWKTG Trigger: GCCGGTTTTCCATACTCTCACCAATGGCCACGCCAAGGGCCGCTTGTCTGGGGACGAGGGCTCAGAGGACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
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| CDS CAA 72 bp | GCGGGCCCCCATTTAAACCGGTTGCGGCGCATCTTCTaGTTGGTGGGCTCGGAGCAGGTGTCCTCCGACTGC | + |
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Preference number: 6 (lower is better) Translates to: AGPHLNRLRRIF*LVGSEQVSSDC Trigger: GCAGTCGGAGGACACCTGCTCCGAGCCCACCAACAAGAAGATGCGCCGCAACCGGTTTAAATGGGGGCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 ENSMUST00000146786.8 |
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| CDS CCA 72 bp | GACAAGCGGCCCTTGGCGTGGCCATTGGTGAGAGTATaGAAAACCGGCTTGGTGTCGAGATCCGCCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: DKRPLAWPLVRV*KTGLVSRSAPL Trigger: GAGCGGGGCGGATCTCGACACCAAGCCGGTTTTCCATACTCTCACCAATGGCCACGCCAAGGGCCGCTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
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| CDS CAA 72 bp | GGCCCCCATTTAAACCGGTTGCGGCGCATCTTCTTGTaGGTGGGCTCGGAGCAGGTGTCCTCCGACTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GPHLNRLRRIFL*VGSEQVSSDCP Trigger: TGGGCAGTCGGAGGACACCTGCTCCGAGCCCACCAACAAGAAGATGCGCCGCAACCGGTTTAAATGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 ENSMUST00000146786.8 |
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| CDS TCA 72 bp | CGTCCCCAGACAAGCGGCCCTTGGCGTGGCCATTGGTaGGAGTATGGAAAACCGGCTTGGTGTCGAGATCCG | + |
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Preference number: 6 (lower is better) Translates to: RPQTSGPWRGHW*EYGKPAWCRDP Trigger: CGGATCTCGACACCAAGCCGGTTTTCCATACTCTCACCAATGGCCACGCCAAGGGCCGCTTGTCTGGGGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
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| CDS TCA 72 bp | ACATGTGGGAGTTCTGTAGCTGAGTCACCGCGGCCATaGAGGGCTGCTGGGCCATGTGACTGCCTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TCGSSVAESPRP*RAAGPCDCLGS Trigger: AGAGCCCAGGCAGTCACATGGCCCAGCAGCCCTTCATGGCCGCGGTGACTCAGCTACAGAACTCCCACATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS CAA 90 bp | TTCGGGGACGGCAGTAACTCCTCCAAGGCCTGGATCAGCACTTCCTaGGTGACTCCGGAGCTCAGCAGGGCACTCAGGAGTTCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FGDGSNSSKAWISTS*VTPELSRALRSSCW Trigger: CCAGCAAGAACTCCTGAGTGCCCTGCTGAGCTCCGGAGTCACCAAGGAAGTGCTGATCCAGGCCTTGGAGGAGTTACTGCCGTCCCCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
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| CDS CCA 72 bp | CCGAAATTCGGGGACGGCAGTAACTCCTCCAAGGCCTaGATCAGCACTTCCTTGGTGACTCCGGAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PKFGDGSNSSKA*ISTSLVTPELS Trigger: GCTGAGCTCCGGAGTCACCAAGGAAGTGCTGATCCAGGCCTTGGAGGAGTTACTGCCGTCCCCGAATTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108114.9 |
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| CDS CAA 72 bp | GCAGGTGTCCTCCGACTGCCCAGGCCCCTGGTTCTGTaGACTGAACTGTCGGAGGATCTCCCGTTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AGVLRLPRPLVL*TELSEDLPLLS Trigger: AGAAAGCAACGGGAGATCCTCCGACAGTTCAGTCAACAGAACCAGGGGCCTGGGCAGTCGGAGGACACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108114.9 ENSMUST00000146786.8 |
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| CDS GCA 72 bp | CCTAGGCCGTGGGCTTTGGAAGGGGAGACCCCTCGTTaGAAACATTCTGCCCTGTTACACTCCTCCACTAAG | + |
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Preference number: 6 (lower is better) Translates to: PRPWALEGETPR*KHSALLHSSTK Trigger: CTTAGTGGAGGAGTGTAACAGGGCAGAATGTTTGCAACGAGGGGTCTCCCCTTCCAAAGCCCACGGCCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 ENSMUST00000146786.8 |
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| CDS GCA 72 bp | CTGACGGGAGGCAGTCCTCCTCCCGACACTGTGATCTaGATTTTACTGTCAGGTGAGAGGAGACTGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTGGSPPPDTVI*ILLSGERRLWP Trigger: AGGCCACAGTCTCCTCTCACCTGACAGTAAAATGCAGATCACAGTGTCGGGAGGAGGACTGCCTCCCGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS GCA 72 bp | TGGACTGTCTGGTTGAACTGTCGGAGGATCTCCCGTTaGTTTCTGACGTACCAAGTGTACAGGGCAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: WTVWLNCRRISR*FLTYQVYRAAL Trigger: GAGAGCTGCCCTGTACACTTGGTACGTCAGAAAGCAACGGGAGATCCTCCGACAGTTCAACCAGACAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 |
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| CDS GCA 72 bp | GAGAGTGTTGATGCTACTGGTATCTGTGACCACCATTaGAGATGGGAACCGGGAGGTGTGGGAATACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ESVDATGICDHH*RWEPGGVGILG Trigger: CCCCAGTATTCCCACACCTCCCGGTTCCCATCTGCAATGGTGGTCACAGATACCAGTAGCATCAACACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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| CDS CAA 90 bp | GCTTGCAGTGGACACTGTTTACTGGAAGACATGCTGGTGAGAGTGTaGATGCTACTGGTATCTGTGACCACCATTGCAGATGGGAACCGG | + |
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Preference number: 6 (lower is better) Translates to: ACSGHCLLEDMLVRV*MLLVSVTTIADGNR Trigger: CCGGTTCCCATCTGCAATGGTGGTCACAGATACCAGTAGCATCAACACTCTCACCAGCATGTCTTCCAGTAAACAGTGTCCACTGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021016.10 ENSMUST00000108113.3 ENSMUST00000108114.9 |
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