Pregenerated sensors for HNF1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029556Ensembl transcript IDs: ENSMUST00000031535.12, ENSMUST00000176550.2, ENSMUST00000176911.8
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTTACTGGGAGAGAGGGTGGTTGTGGGCAGGCCGGGGGAACTGTaGGCAGGCAGCGCAGGGCCCGGGCCTGGCCCCGGTGGAGGTCCG | + |
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Preference number: 1 (lower is better) Translates to: TLLGERVVVGRPGEL*AGSAGPGPGPGGGP Trigger: CGGACCTCCACCGGGGCCAGGCCCGGGCCCTGCGCTGCCTGCTCACAGTTCCCCCGGCCTGCCCACAACCACCCTCTCTCCCAGTAAGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR GCA 90 bp | CAGATATCCTCCAGGCAGTGTGGCTGCGGCCCTCCTCACCCCCTATaGAGGCAGTGCAGGCCCTGGGGACCCAGCTCCTGGGAGGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: QISSRQCGCGPPHPL*RQCRPWGPSSWEAV Trigger: GACTGCCTCCCAGGAGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGCCACACTGCCTGGAGGATATCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CCA 90 bp | CAGGGCCCGGGCCTGGCCCCGGTGGAGGTCCGTTATAGGTGTCCATaGCCAACTTGTGCCGGAAGGCTTCCTCCTTGCGCCGGTTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: QGPGLAPVEVRYRCP*PTCAGRLPPCAGWQ Trigger: TTGCCAACCGGCGCAAGGAGGAAGCCTTCCGGCACAAGTTGGCCATGGACACCTATAACGGACCTCCACCGGGGCCAGGCCCGGGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | GGTGCTGGATGTTCGACGGGTCCTGGCTGGGGATGTGGATGGTGGTaGCTGGAGAGGGTGGCTCGTGAAGCCCGGGCTCACTGGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: GAGCSTGPGWGCGWW*LERVAREARAHWRP Trigger: AGGCCTCCAGTGAGCCCGGGCTTCACGAGCCACCCTCTCCAGCCACCACCATCCACATCCCCAGCCAGGACCCGTCGAACATCCAGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | GCAGGTGCTGGATGTTCGACGGGTCCTGGCTGGGGATGTGGATGGTaGTGGCTGGAGAGGGTGGCTCGTGAAGCCCGGGCTCACTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: AGAGCSTGPGWGCGW*WLERVAREARAHWR Trigger: CCTCCAGTGAGCCCGGGCTTCACGAGCCACCCTCTCCAGCCACCACCATCCACATCCCCAGCCAGGACCCGTCGAACATCCAGCACCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | GCTGCAGGTGCTGGATGTTCGACGGGTCCTGGCTGGGGATGTGGATaGTGGTGGCTGGAGAGGGTGGCTCGTGAAGCCCGGGCTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: AAGAGCSTGPGWGCG*WWLERVAREARAHW Trigger: CCAGTGAGCCCGGGCTTCACGAGCCACCCTCTCCAGCCACCACCATCCACATCCCCAGCCAGGACCCGTCGAACATCCAGCACCTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | GCCGGTGAGCAGGCTGCAGGTGCTGGATGTTCGACGGGTCCTGGCTaGGGATGTGGATGGTGGTGGCTGGAGAGGGTGGCTCGTGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: AGEQAAGAGCSTGPG*GCGWWWLERVAREA Trigger: GGCTTCACGAGCCACCCTCTCCAGCCACCACCATCCACATCCCCAGCCAGGACCCGTCGAACATCCAGCACCTGCAGCCTGCTCACCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR TCA 90 bp | AACACCAGGCTGCTGGAGGACACTGTGGGACTGGTGCTGAGCCGGTaGGCAGGCTGCAGGTGCTGGATGTTCGACGGGTCCTGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: NTRLLEDTVGLVLSR*AGCRCWMFDGSWLG Trigger: CCCCAGCCAGGACCCGTCGAACATCCAGCACCTGCAGCCTGCTCACCGGCTCAGCACCAGTCCCACAGTGTCCTCCAGCAGCCTGGTGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR GCA 90 bp | TGTCAGGTGGCATGGCAGGCTCAGATATCCTCCAGGCAGTGTGGCTaGGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: CQVAWQAQISSRQCG*GPPHPLCRQCRPWG Trigger: TCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGCCACACTGCCTGGAGGATATCTGAGCCTGCCATGCCACCTGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CCA 90 bp | CCTGTGTCAGGTGGCATGGCAGGCTCAGATATCCTCCAGGCAGTGTaGCTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PVSGGMAGSDILQAV*LRPSSPPMQAVQAL Trigger: CAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGCCACACTGCCTGGAGGATATCTGAGCCTGCCATGCCACCTGACACAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR GCA 90 bp | CGTGGTCAGGCTACTCCCCATGCTGTTGATGACAGGCACGCTCTGTaGCTGAGTGGAGGCCAGACCGATAACCAGGGTGGAGGCGCCCGT | + |
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Preference number: 1 (lower is better) Translates to: RGQATPHAVDDRHAL*LSGGQTDNQGGGAR Trigger: ACGGGCGCCTCCACCCTGGTTATCGGTCTGGCCTCCACTCAGGCACAGAGCGTGCCTGTCATCAACAGCATGGGGAGTAGCCTGACCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | ACCTCGGCTGCCTCACTGGTTGCAGACTGTCCGTACCGTACACCGTaGACCTTACTGGGAGAGAGGGTGGTTGTGGGCAGGCCGGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: TSAASLVADCPYRTP*TLLGERVVVGRPGE Trigger: TTCCCCCGGCCTGCCCACAACCACCCTCTCTCCCAGTAAGGTCCACGGTGTACGGTACGGACAGTCTGCAACCAGTGAGGCAGCCGAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | CCTCACTGGTTGCAGACTGTCCGTACCGTACACCGTGGACCTTACTaGGAGAGAGGGTGGTTGTGGGCAGGCCGGGGGAACTGTGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PHWLQTVRTVHRGPY*ERGWLWAGRGNCEQ Trigger: CTGCTCACAGTTCCCCCGGCCTGCCCACAACCACCCTCTCTCCCAGTAAGGTCCACGGTGTACGGTACGGACAGTCTGCAACCAGTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR TCA 90 bp | CCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTaGGACACCTCAGAGCCATCCCTTCCTGATGATGGAGGAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PDWAVLQLLEARLSG*DTSEPSLPDDGGAA Trigger: TGCTGCTCCTCCATCATCAGGAAGGGATGGCTCTGAGGTGTCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR GCA 90 bp | GGCCCGATGGTCATGACCCCAGGTAGCGAGGCCATGATAAGGTTCTaGGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: GPMVMTPGSEAMIRF*GCWLRPGDVCSKLC Trigger: GCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGTCATGACCATCGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | TCTGTGATCAACATGGTCTGCGGGAGCAGGCTGGTGTGCGTGTACTaGGCCACCTCAGGCTTGTGGCTGTATAAGGCGTGGGGGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SVINMVCGSRLVCVY*ATSGLWLYKAWGLC Trigger: GCAGAGCCCCCACGCCTTATACAGCCACAAGCCTGAGGTGGCCCAGTACACGCACACCAGCCTGCTCCCGCAGACCATGTTGATCACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR GCA 90 bp | GGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTaGAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: GWHQKTHPREQMACK*SPGAGRRDGLVGES Trigger: GCTTTCCCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR GCA 90 bp | TTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTaGAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: LPGWHQKTHPREQMA*KCSPGAGRRDGLVG Trigger: CCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR GCA 90 bp | AGGTTGGTGTCTGTGATCAACATGGTCTGCGGGAGCAGGCTGGTGTaGGTGTACTGGGCCACCTCAGGCTTGTGGCTGTATAAGGCGTGG | + |
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Preference number: 1 (lower is better) Translates to: RLVSVINMVCGSRLV*VYWATSGLWLYKAW Trigger: CCACGCCTTATACAGCCACAAGCCTGAGGTGGCCCAGTACACGCACACCAGCCTGCTCCCGCAGACCATGTTGATCACAGACACCAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | GCAAGTTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATaGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: ASCQAGIRRHIQGNR*PASAVLGLGEGMAW Trigger: CCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CCA 90 bp | GTCATGACCCCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTGCTaGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: VMTPGSEAMIRFCGC*LRPGDVCSKLCSAV Trigger: GACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGTCATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR GCA 90 bp | CTACAGTCCAGGATGACAAAGGAGCTGGCTGAAGGCCAGGTTCCCTaGAGTAGGCCCGAGGAGACAGTCATGTGTGCTGTGTTTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LQSRMTKELAEGQVP*SRPEETVMCAVFPW Trigger: CCAGGGAAACACAGCACACATGACTGTCTCCTCGGGCCTACTGCAGGGAACCTGGCCTTCAGCCAGCTCCTTTGTCATCCTGGACTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR GCA 90 bp | ATGGTCATGACCCCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTaGTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: MVMTPGSEAMIRFCG*WLRPGDVCSKLCSA Trigger: AGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGTCATGACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR TCA 90 bp | AACATACAGGCTCACTTATGGTTGGCCGTAGGCTACAGTCCAGGATaGCAAAGGAGCTGGCTGAAGGCCAGGTTCCCTGCAGTAGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: NIQAHLWLAVGYSPG*QRSWLKARFPAVGP Trigger: CGGGCCTACTGCAGGGAACCTGGCCTTCAGCCAGCTCCTTTGTCATCCTGGACTGTAGCCTACGGCCAACCATAAGTGAGCCTGTATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CCA 90 bp | TCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCAGTCCTaGGGCTGGGAGAAGGGATGGCTTGGTAGGGGAAAGCCTAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: SEDTSKGTDGLQVQS*GWEKGWLGRGKPRR Trigger: TCTCCTAGGCTTTCCCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CCA 90 bp | ACCCAGGATTTCTCAGAATGGCTGCTAGCCCCCAGGCCACTTAGGTaGCTTCTCTCTGCTGGTCTTGGTACCCTCTCCACTAGACACTGC | + |
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Preference number: 1 (lower is better) Translates to: TQDFSEWLLAPRPLR*LLSAGLGTLSTRHC Trigger: GCAGTGTCTAGTGGAGAGGGTACCAAGACCAGCAGAGAGAAGCCACCTAAGTGGCCTGGGGGCTAGCAGCCATTCTGAGAAATCCTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CCA 90 bp | GAAGAGGAGGCCATCTGGGTGGAGATAAAAGTCTCGATGACACTATaGTTGGATGGCAGCAGGTGGCTGTGCCCGTTGGAGTCGGAACTC | + |
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Preference number: 1 (lower is better) Translates to: EEEAIWVEIKVSMTL*LDGSRWLCPLESEL Trigger: GAGTTCCGACTCCAACGGGCACAGCCACCTGCTGCCATCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGATGGCCTCCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 90 bp | GGCCATCTGGGTGGAGATAAAAGTCTCGATGACACTATGGTTGGATaGCAGCAGGTGGCTGTGCCCGTTGGAGTCGGAACTCTGATACAA | + |
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Preference number: 1 (lower is better) Translates to: GHLGGDKSLDDTMVG*QQVAVPVGVGTLIQ Trigger: TTGTATCAGAGTTCCGACTCCAACGGGCACAGCCACCTGCTGCCATCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGACCGATAACCAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGTACTGGGAGAGAGGGTaGTTGTGGGCAGGCCGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ARPITRVEAPVFVNVGPRYWERG*LWAGRG Trigger: CCCCCGGCCTGCCCACAACCACCCTCTCTCCCAGTA...CCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTGGTTATCGGTCTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGCCCCTATGCAGGCAGTaGAGGCCCTGGGGACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QMACKCSPGAGRRDGLVGPLCRQ*RPWGPS Trigger: GCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGG...CCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCAGACCGATAACCAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGACACGCACCTCCGTaGCAAGGTTGGAGCCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: EARPITRVEAPVFVNVGPRHAPP*QGWSLA Trigger: GGCTAGGCTCCAACCTTGTCACGGAGGTGCGTGTCT...GGGACCCACGTTCACGAACACGGGCGCCTCCACCCTGGTTATCGGTCTGGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGCTGCAGGTGCTGGATGTTCGACGGGTCCTGGCTGGGGATGTGGATGGTAAGGCGTGGGGGCTCTaGAGCTGGGCCATGGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SRLQVLDVRRVLAGDVDGKAWGL*SWAMVA Trigger: GGCAACCATGGCCCAGCTGCAGAGCCCCCACGCCTT...ACCATCCACATCCCCAGCCAGGACCCGTCGAACATCCAGCACCTGCAGCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGCACGTGGGTCTCTGGTaGAGGGTGGAATGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QMACKCSPGAGRRDGLVGHVGLW*RVEWPG Trigger: CCCAGGCCATTCCACCCTGCACCAGAGACCCACGTG...CCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTCTGGATGCACTCCGCCCTATTACACTCCTCCACCAAGGTCTCTCGCTCGCCTGGAACAGGATCTaGTGGGATGCGGGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PPLDALRPITLLHQGLSLAWNRI*WDAGPH Trigger: GTGGGGCCCCGCATCCCAGCAGATCCTGTTCCAGGC...GAGCGAGAGACCTTGGTGGAGGAGTGTAATAGGGCGGAGTGCATCCAGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTTACTGGGAGAGAGGGTGGTTGTGGGCAGGCCGGGGGAACTGTGAGCAGGTGGAACAGGATCTGCTaGGATGCGGGGCCCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: DLTGREGGCGQAGGTVSRWNRIC*DAGPHL Trigger: CAAGTGGGGCCCCGCATCCCAGCAGATCCTGTTCCA...CCTGCTCACAGTTCCCCCGGCCTGCCCACAACCACCCTCTCTCCCAGTAAGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGAGGGTGGCTCGTGAAGCCCGGGCTCACTGGAGGCCTCTGTGTCTGAGGTGGGCTCCAGGCCTGTaGGGGATACTTGGTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LERVAREARAHWRPLCLRWAPGL*GILGVR Trigger: CCTTACACCAAGTATCCCCCACAGGCCTGGAGCCCA...CCTCAGACACAGAGGCCTCCAGTGAGCCCGGGCTTCACGAGCCACCCTCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCTGCAGGTGCTGGATGTTCGACGGGTCCTGGCTGGGGATGTGGATGGTTCTGCGGGAGCAGGCTaGTGTGCGTGTACTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SRLQVLDVRRVLAGDVDGSAGAG*CACTGP Trigger: TGGCCCAGTACACGCACACCAGCCTGCTCCCGCAGA...ACCATCCACATCCCCAGCCAGGACCCGTCGAACATCCAGCACCTGCAGCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCAGGCACGCTCTGTGCCTaGGTGGAGGCCAGACCGATA | + |
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Preference number: 2 (lower is better) Translates to: DAVVGKTGPAAAWSGYSPGTLCA*VEARPI Trigger: TATCGGTCTGGCCTCCACTCAGGCACAGAGCGTGCC...TGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTTACTGGGAGAGAGGGTGGTTGTGGGCAGGCCGGGGGAACTGTGAGCAGGGGAAGGCTTCCTCCTTaGGCCGGTTGGCAAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: DLTGREGGCGQAGGTVSRGRLPP*AGWQTS Trigger: ACTGGTTTGCCAACCGGCGCAAGGAGGAAGCCTTCC...CCTGCTCACAGTTCCCCCGGCCTGCCCACAACCACCCTCTCTCCCAGTAAGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR GCA 90 bp | GATGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCAGACAGGCACGCTCTGTaGCTGAGTGGAGGCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: DAVVGKTGPAAAWSGYSPDRHAL*LSGGQT Trigger: GGTCTGGCCTCCACTCAGGCACAGAGCGTGCCTGTC...TGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGGGCTCACTGGAGGCCTCTGTGTCTGAGGTGAAGACCTGCTTGGTGGGTTGGGGGCTCTGCAGCTaGGCCATGGTTGCCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: SPGSLEASVSEVKTCLVGWGLCS*AMVAMK Trigger: CTTCATGGCAACCATGGCCCAGCTGCAGAGCCCCCA...ACCCACCAAGCAGGTCTTCACCTCAGACACAGAGGCCTCCAGTGAGCCCGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCCTAGGAGAGCCCCGAGTGGCTTCCCCTCAGCTCCCGAGCCTAGCAGAACTCAGCACAGATCCTTaGAGGCCTGCAGGCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: ESLGEPRVASPQLPSLAELSTDP*RPAGSD Trigger: GTCAGAGCCTGCAGGCCTTCAAGGATCTGTGCTGAG...TTCTGCTAGGCTCGGGAGCTGAGGGGAAGCCACTCGGGGCTCTCCTAGGCTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CAA 90 bp | GTGAAGACCTGCTTGGTGGGTGTGAGGCTGGCAAGGGTGCTGAGGTaGGTGTCTGTGATCAACATGGTCTGCGGGAGCAGGCTGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: VKTCLVGVRLARVLR*VSVINMVCGSRLVC Trigger: GCACACCAGCCTGCTCCCGCAGACCATGTTGATCACAGACACCAACCTCAGCACCCTTGCCAGCCTCACACCCACCAAGCAGGTCTTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCGGGCTCACTGGAGGCCTCTGTGTCTGAGGTGAAGACCTGCTTGGTGGGTGCCATGATAAGGTTCTaGGGCTGCTGGTTGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: SPGSLEASVSEVKTCLVGAMIRF*GCWLRP Trigger: GGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGC...ACCCACCAAGCAGGTCTTCACCTCAGACACAGAGGCCTCCAGTGAGCCCGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CAA 90 bp | ATGACCCCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTGCTGGTaGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: MTPGSEAMIRFCGCW*RPGDVCSKLCSAVR Trigger: CCTGACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGACACCTCAGAGCAGCAGTGTCAATGAATaGGTAGACTTCTGGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: GPSSSSSRLACQAETPQSSSVNE*VDFWEG Trigger: GCCTTCCCAGAAGTCTACGCATTCATTGACACTGCT...GCTCTGAGGTGTCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTGAGGTTGGTGTCTGTGATCAACATGGTCTGCGGGAGCAGGCTGGTGTGCACGCCCCTTCTTAGTTaGCAGCTCATCGCCTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLRLVSVINMVCGSRLVCTPLLS*QLIACG Trigger: CCCACAGGCGATGAGCTGCCAACTAAGAAGGGGCGT...GCACACCAGCCTGCTCCCGCAGACCATGTTGATCACAGACACCAACCTCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR CAA 90 bp | TCCTATTCTAAACAGCAGGGATGGTGGTCCACAATACTGCCCAGATaGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SYSKQQGWWSTILPR*GRPPAPRGSLVRLR Trigger: TCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCATCCCTGCTGTTTAGAATAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTGTGGTCTTGGCATGAGTTGCAGGTCCTAAGGAACAGGGATGACAACCCGCTGCAAGTGCAGTCCTaGGGCTGGGAGAAGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: MVWSWHELQVLRNRDDNPLQVQS*GWEKGW Trigger: CCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAG...CGGGTTGTCATCCCTGTTCCTTAGGACCTGCAACTCATGCCAAGACCACACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGGCTGCTGATAGGAGGGATGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTTATAGGTGTCCATaGCCAACTTGTGCCGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ERLLIGGMQWLGKLDRLQRYRCP*PTCAGR Trigger: CCTTCCGGCACAAGTTGGCCATGGACACCTATAACG...CTGCAGCCGGTCCAGTTTTCCCAACCACTGCATCCCTCCTATCAGCAGCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGATAAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCCTGTGGGGGATACTTaGTGTAAGGCCGCAGACACT | + |
|
Preference number: 2 (lower is better) Translates to: AMIRFCGCWLRPGDVCSKPVGDT*CKAADT Trigger: AGTGTCTGCGGCCTTACACCAAGTATCCCCCACAGG...CTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGAGGAGGCCATCTGGGTGGAGATAAAAGTCTCGATGACACTATGGTTGGACAGGATCTGCTGGGATaGGGGGCCCCACTTGAACCG | + |
|
Preference number: 2 (lower is better) Translates to: GRGGHLGGDKSLDDTMVGQDLLG*GAPLEP Trigger: CGGTTCAAGTGGGGCCCCGCATCCCAGCAGATCCTG...TCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGATGGCCTCCTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR CCA 90 bp | GTCATGTGTGCTGTGTTTCCCTGGGCTGCTCGGGACCCAGGATTTCTCAGAATGCTGTGTCAGGTGGCATaGCAGGCTCAGATATCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VMCAVFPWAARDPGFLRMLCQVA*QAQISS Trigger: GGAGGATATCTGAGCCTGCCATGCCACCTGACACAG...CATTCTGAGAAATCCTGGGTCCCGAGCAGCCCAGGGAAACACAGCACACATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGAGGAGGCCATCTGGGTGGAGATAAAAGTCTCGATGACACTATGGTTGGATCGACGGGTCCTGGCTaGGGATGTGGATGGTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GRGGHLGGDKSLDDTMVGSTGPG*GCGWWW Trigger: CCACCACCATCCACATCCCCAGCCAGGACCCGTCGA...TCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGATGGCCTCCTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGATGCAAGTTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGGCTGGGAGAAGGGATaGCTTGGTAGGGGAAAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SGCKLPGWHQKTHPREQMGWEKG*LGRGKP Trigger: AGGCTTTCCCCTACCAAGCCATCCCTTCTCCCAGCC...CATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGCATCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CAA 90 bp | ATAGCAGGAAGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGATaGTCCATGGTGTGGTCTTGGCATGAGTTGCAGGTCCTAAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: IAGRKLSGAYRQRSG*SMVWSWHELQVLRN Trigger: GTTCCTTAGGACCTGCAACTCATGCCAAGACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCTTCCTGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR-3UTR CCA 90 bp | GTCATGTGTGCTGTGTTTCCCTGGGCTGCTCGGGACCCAGGATTTCTCAGAATGTGCAAGTTGCCAGGCTaGCATCAGAAGACACATCCA | + |
|
Preference number: 2 (lower is better) Translates to: VMCAVFPWAARDPGFLRMCKLPG*HQKTHP Trigger: TGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGCA...CATTCTGAGAAATCCTGGGTCCCGAGCAGCCCAGGGAAACACAGCACACATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGAGGAGGCCATCTGGGTGGAGATAAAAGTCTCGATGACACTATGGTTGGAATGTTCGACGGGTCCTaGCTGGGGATGTGGATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GRGGHLGGDKSLDDTMVGMFDGS*LGMWMV Trigger: CACCATCCACATCCCCAGCCAGGACCCGTCGAACAT...TCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGATGGCCTCCTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR GCA 72 bp | TCCAGGCAGTGTGGCTGCGGCCCTCCTCACCCCCTATaGAGGCAGTGCAGGCCCTGGGGACCCAGCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SRQCGCGPPHPL*RQCRPWGPSSW Trigger: CCAGGAGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGCCACACTGCCTGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR TCA 72 bp | AGGCGTGGGGGCTCTGCAGCTGGGCCATGGTTGCCATaGAGGGGCTCTGGGCCACGTGGCTCTGTACGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RRGGSAAGPWLP*RGSGPRGSVRG Trigger: CCCCCGTACAGAGCCACGTGGCCCAGAGCCCCTTCATGGCAACCATGGCCCAGCTGCAGAGCCCCCACGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR CCA 72 bp | GGTGGCATGGCAGGCTCAGATATCCTCCAGGCAGTGTaGCTGCGGCCCTCCTCACCCCCTATGCAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GGMAGSDILQAV*LRPSSPPMQAV Trigger: CACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGCCACACTGCCTGGAGGATATCTGAGCCTGCCATGCCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CCA 72 bp | GGCCTGGCCCCGGTGGAGGTCCGTTATAGGTGTCCATaGCCAACTTGTGCCGGAAGGCTTCCTCCTTGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLAPVEVRYRCP*PTCAGRLPPCA Trigger: GGCGCAAGGAGGAAGCCTTCCGGCACAAGTTGGCCATGGACACCTATAACGGACCTCCACCGGGGCCAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR CCA 72 bp | AGGCTGGTGTGCGTGTACTGGGCCACCTCAGGCTTGTaGCTGTATAAGGCGTGGGGGCTCTGCAGCTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLVCVYWATSGL*LYKAWGLCSWA Trigger: GGCCCAGCTGCAGAGCCCCCACGCCTTATACAGCCACAAGCCTGAGGTGGCCCAGTACACGCACACCAGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCGGGCTCACTGGAGGCCTCTGTGTCTGAGGTGAAGACCTGCTTGGTGGGTCGGAAGGCTTCCTCCTaGCGCCGGTTGGCAAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPGSLEASVSEVKTCLVGRKASS*RRLANQ Trigger: CTGGTTTGCCAACCGGCGCAAGGAGGAAGCCTTCCG...ACCCACCAAGCAGGTCTTCACCTCAGACACAGAGGCCTCCAGTGAGCCCGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR GCA 72 bp | TGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTGACGGGAGGCAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CWLRPGDVCSKL*SAVRVLTGGRG Trigger: TCCCCTGCCTCCCGTCAGCACCCTGACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| 3UTR GCA 72 bp | ACCTCAGGCTTGTGGCTGTATAAGGCGTGGGGGCTCTaGAGCTGGGCCATGGTTGCCATGAAGGGGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TSGLWLYKAWGL*SWAMVAMKGLW Trigger: CCAGAGCCCCTTCATGGCAACCATGGCCCAGCTGCAGAGCCCCCACGCCTTATACAGCCACAAGCCTGAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR TCA 72 bp | GCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTaGGACACCTCAGAGCCATCCCTTCCTGATGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVLQLLEARLSG*DTSEPSLPDDG Trigger: TCCATCATCAGGAAGGGATGGCTCTGAGGTGTCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR GCA 72 bp | AGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTaGTCCAAGCTGTGCAGTGCTGTCAGGGTGCTGACG | + |
|
Preference number: 3 (lower is better) Translates to: RFCGCWLRPGDV*SKLCSAVRVLT Trigger: CGTCAGCACCCTGACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| 3UTR GCA 72 bp | AGGGTGCTGAGGTTGGTGTCTGTGATCAACATGGTCTaGGGGAGCAGGCTGGTGTGCGTGTACTGGGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RVLRLVSVINMV*GSRLVCVYWAT Trigger: GGTGGCCCAGTACACGCACACCAGCCTGCTCCCGCAGACCATGTTGATCACAGACACCAACCTCAGCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR CCA 72 bp | GCCTCACTGGTTGCAGACTGTCCGTACCGTACACCGTaGACCTTACTGGGAGAGAGGGTGGTTGTGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLVADCPYRTP*TLLGERVVVGR Trigger: CCTGCCCACAACCACCCTCTCTCCCAGTAAGGTCCACGGTGTACGGTACGGACAGTCTGCAACCAGTGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR CCA 72 bp | AGCAGGCTGCTGGGCTCCAGGCCTGTGGGGGATACTTaGTGTAAGGCCGCAGACACTGTGACTAAGGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: SRLLGSRPVGDT*CKAADTVTKGP Trigger: AGGTCCCTTAGTCACAGTGTCTGCGGCCTTACACCAAGTATCCCCCACAGGCCTGGAGCCCAGCAGCCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| 3UTR CCA 72 bp | AACATGGTCTGCGGGAGCAGGCTGGTGTGCGTGTACTaGGCCACCTCAGGCTTGTGGCTGTATAAGGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NMVCGSRLVCVY*ATSGLWLYKAW Trigger: CCACGCCTTATACAGCCACAAGCCTGAGGTGGCCCAGTACACGCACACCAGCCTGCTCCCGCAGACCATGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR GCA 72 bp | ACCCCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTaGTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TPGSEAMIRFCG*WLRPGDVCSKL Trigger: CAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR GCA 72 bp | GTCATGACCCCAGGTAGCGAGGCCATGATAAGGTTCTaGGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VMTPGSEAMIRF*GCWLRPGDVCS Trigger: GGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGTCATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| 3UTR GCA 72 bp | GCTACTCCCCATGCTGTTGATGACAGGCACGCTCTGTaGCTGAGTGGAGGCCAGACCGATAACCAGGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ATPHAVDDRHAL*LSGGQTDNQGG Trigger: TCCACCCTGGTTATCGGTCTGGCCTCCACTCAGGCACAGAGCGTGCCTGTCATCAACAGCATGGGGAGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| 3UTR CCA 72 bp | AACAGCAGGGATGGTGGTCCACAATACTGCCCAGATTaGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NSRDGGPQYCPD*AVLQLLEARLS Trigger: TGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCATCCCTGCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CCA 72 bp | AAGGGAACAGATGGCCTGCAAGTGCAGTCCTGGGGCTaGGAGAAGGGATGGCTTGGTAGGGGAAAGCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: KGTDGLQVQSWG*EKGWLGRGKPR Trigger: CCTAGGCTTTCCCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CCA 72 bp | CAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATaGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QAGIRRHIQGNR*PASAVLGLGEG Trigger: CCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CCA 72 bp | CCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTGCTaGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PGSEAMIRFCGC*LRPGDVCSKLC Trigger: GCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| 3UTR GCA 72 bp | TGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTaGAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: WHQKTHPREQMA*KCSPGAGRRDG Trigger: GCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR GCA 72 bp | TCTGTGATCAACATGGTCTGCGGGAGCAGGCTGGTGTaGGTGTACTGGGCCACCTCAGGCTTGTGGCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SVINMVCGSRLV*VYWATSGLWLY Trigger: ATACAGCCACAAGCCTGAGGTGGCCCAGTACACGCACACCAGCCTGCTCCCGCAGACCATGTTGATCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR CCA 72 bp | ACATCCAAGGGAACAGATGGCCTGCAAGTGCAGTCCTaGGGCTGGGAGAAGGGATGGCTTGGTAGGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSKGTDGLQVQS*GWEKGWLGRGK Trigger: CTTTCCCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CCA 72 bp | CACTATGGTTGGATGGCAGCAGGTGGCTGTGCCCGTTaGAGTCGGAACTCTGATACAACACCAGGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HYGWMAAGGCAR*SRNSDTTPGCW Trigger: CCAGCAGCCTGGTGTTGTATCAGAGTTCCGACTCCAACGGGCACAGCCACCTGCTGCCATCCAACCATAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGATTGTCCATGGTGTGGTCTTGGGGGAGAAGGGATGGCTaGGTAGGGGAAAGCCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLSGAYRQRSGLSMVWSWGRRDG*VGESLG Trigger: TCCTAGGCTTTCCCCTACCAAGCCATCCCTTCTCCC...CCAAGACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGACAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR TCA 72 bp | GCTCACTTATGGTTGGCCGTAGGCTACAGTCCAGGATaGCAAAGGAGCTGGCTGAAGGCCAGGTTCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AHLWLAVGYSPG*QRSWLKARFPA Trigger: TGCAGGGAACCTGGCCTTCAGCCAGCTCCTTTGTCATCCTGGACTGTAGCCTACGGCCAACCATAAGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR GCA 72 bp | CCTATTCTAAACAGCAGGGATGGTGGTCCACAATACTaGCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PILNSRDGGPQY*PDWAVLQLLEA Trigger: AGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCATCCCTGCTGTTTAGAATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CCA 72 bp | TGGAGGAGCAGCAGTGTCAATGAATGCGTAGACTTCTaGGAAGGCCAGCAGCCTGTGTCAGGTGGCATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WRSSSVNECVDF*EGQQPVSGGMA Trigger: TGCCATGCCACCTGACACAGGCTGCTGGCCTTCCCAGAAGTCTACGCATTCATTGACACTGCTGCTCCTCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CCA 72 bp | GCCATCTGGGTGGAGATAAAAGTCTCGATGACACTATaGTTGGATGGCAGCAGGTGGCTGTGCCCGTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AIWVEIKVSMTL*LDGSRWLCPLE Trigger: CTCCAACGGGCACAGCCACCTGCTGCCATCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR TCA 72 bp | CATCCCTTCCTGATGATGGAGGAGCAGCAGTGTCAATaGATGCGTAGACTTCTGGGAAGGCCAGCAGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HPFLMMEEQQCQ*MRRLLGRPAAC Trigger: ACAGGCTGCTGGCCTTCCCAGAAGTCTACGCATTCATTGACACTGCTGCTCCTCCATCATCAGGAAGGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR GCA 72 bp | CCGAGCCCTGAAATGGCCTTTCTAGTGGATGCAAGTTaGCAGGCTGGCATCAGAAGACACATCCAAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSPEMAFLVDAS*QAGIRRHIQGN Trigger: GTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGCATCCACTAGAAAGGCCATTTCAGGGCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CCA 72 bp | GGTGGAGATAAAAGTCTCGATGACACTATGGTTGGATaGCAGCAGGTGGCTGTGCCCGTTGGAGTCGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GGDKSLDDTMVG*QQVAVPVGVGT Trigger: AGTTCCGACTCCAACGGGCACAGCCACCTGCTGCCATCCAACCATAGTGTCATCGAGACTTTTATCTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| 3UTR CCA 72 bp | TACAGGCAGAGGAGTGGATTGTCCATGGTGTGGTCTTaGCATGAGTTGCAGGTCCTAAGGAACAGGGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: YRQRSGLSMVWS*HELQVLRNRDD Trigger: GTCATCCCTGTTCCTTAGGACCTGCAACTCATGCCAAGACCACACCATGGACAATCCACTCCTCTGCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR TCA 90 bp | CTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTCCTGTGGGACTGGTGCTaGGCCGGTGAGCAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPSSPPMQAVQALGTQLLWDWC*AGEQAA Trigger: TGCAGCCTGCTCACCGGCTCAGCACCAGTCCCACAG...GAGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTCCTGGGAGCCTGGAACAGGATCTaGTGGGATGCGGGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSSPPMQAVQALGTQLLGAWNRI*WDAGPH Trigger: GTGGGGCCCCGCATCCCAGCAGATCCTGTTCCAGGC...TCCCAGGAGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | GCTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTGGCTCCCCCAAGGCCTaGATCAGGGCCTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAALLTPYAGSAGPGDPAGSPKA*IRASLL Trigger: GAGCAAAGAGGCCCTGATCCAGGCCTTGGGGGAGCC...AGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTCTGGCTGTATAAGGCGTaGGGGCTCTGCAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPSSPPMQAVQALGTQLWLYKA*GLCSWA Trigger: GGCCCAGCTGCAGAGCCCCCACGCCTTATACAGCCA...GAGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCTAGGAGAGCCCCGAGTGGCTTCCCCTCAGCTCCCGAGCCTAGCAGAAAGGCCGGGGGAACTGTaGGCAGGCAGCGCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGEPRVASPQLPSLAERPGEL*AGSAGP Trigger: GGGCCCTGCGCTGCCTGCTCACAGTTCCCCCGGCCT...TTCTGCTAGGCTCGGGAGCTGAGGGGAAGCCACTCGGGGCTCTCCTAGGCTTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR TCA 90 bp | GGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGACACCTCAGAGCCGGGCCCGATGGTCATaGCCCCAGGTAGCGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSSSSSRLACQAETPQSRARWS*PQVARP Trigger: TGGCCTCGCTACCTGGGGTCATGACCATCGGGCCCG...GCTCTGAGGTGTCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | GCCAGACCGATAACCAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGCCTGGAACAGGATCTaGTGGGATGCGGGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARPITRVEAPVFVNVGPRAWNRI*WDAGPH Trigger: GTGGGGCCCCGCATCCCAGCAGATCCTGTTCCAGGC...CCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTGGTTATCGGTCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTAGGTGCTGTGACAGGTaGGACTGGTTGAGACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAALLTPYAGSAGPGDPARCCDR*DWLRPV Trigger: CACGGGTCTCAACCAGTCCCACCTGTCACAGCACCT...AGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGAGGCAGGCTCCCCACGCCCCTTCTTAGTTaGCAGCTCATCGCCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGGARVRERGSQGGRLPTPLLS*QLIACG Trigger: CCCACAGGCGATGAGCTGCCAACTAAGAAGGGGCGT...GGGGAGCCTGCCTCCCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGAGGCAGGCTCCCCGTCCTCCTGAAGAAGTaGCTCCACCACGGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGGGARVRERGSQGGRLPVLLKK*LHHGFL Trigger: CAGAAAGCCGTGGTGGAGTCACTTCTTCAGGAGGAC...GGGGAGCCTGCCTCCCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGAGGCAGGCTCCCCCTTGTTGAGGTGCTGTaGCAGGTGGGACTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGGARVRERGSQGGRLPLVEVL*QVGLVE Trigger: CTCAACCAGTCCCACCTGTCACAGCACCTCAACAAG...GGGGAGCCTGCCTCCCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCCAGACCGATAACCAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCCAGGATCTGCTGGGATaGGGGGCCCCACTTGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: EARPITRVEAPVFVNVGPQDLLG*GAPLEP Trigger: CGGTTCAAGTGGGGCCCCGCATCCCAGCAGATCCTG...GGGACCCACGTTCACGAACACGGGCGCCTCCACCCTGGTTATCGGTCTGGCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTAGACCCGGAGATGTCTaGTCCAAGCTGTGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAALLTPYAGSAGPGDPARPGDV*SKLCSA Trigger: AGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCT...AGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | GGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGACACCTCAGAGCGGGAGCAGGCTGGTGTaGGTGTACTGGGCCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSSSSSRLACQAETPQSGSRLV*VYWATS Trigger: TGAGGTGGCCCAGTACACGCACACCAGCCTGCTCCC...GCTCTGAGGTGTCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAGGGTGGCTCGTGAAGCCCGGGCTCACTGGAGGCCTCTGTGTCTGAGGGTGGGCTGCCTCCTCTaGGCTGAGGTTCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LERVAREARAHWRPLCLRVGCLL*AEVLQL Trigger: GAGCTGGAGAACCTCAGCCCAGAGGAGGCAGCCCAC...CCTCAGACACAGAGGCCTCCAGTGAGCCCGGGCTTCACGAGCCACCCTCTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGCTGGTGCTGAGCCGGTaGGCAGGCTGCAGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDGLQVQSWGWEKGWLGRLVLSR*AGCRCW Trigger: CCAGCACCTGCAGCCTGCTCACCGGCTCAGCACCAG...CCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | GGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGACACCTCAGAGCCTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPSSSSSRLACQAETPQSLQAVQ*CQGADG Trigger: CCCGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...GCTCTGAGGTGTCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGAGGTGCAGGAGGCAGCAGGCAGCTGTGTTGATCTAGGGCCTCAGAGCCATCAGGTAGGGCCCTaGCTCCCCCAAGGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGEVQEAAGSCVDLGPQSHQVGP*LPQGLD Trigger: ATCCAGGCCTTGGGGGAGCCAGGGCCCTACCTGATG...GCTCTGAGGCCCTAGATCAACACAGCTGCCTGCTGCCTCCTGCACCTCCCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTCCTCTTTCAGAATGGGTaGCGCGAAGTCTTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRPSSPPMQAVQALGTQLLFQNG*REVFPI Trigger: GATGGGGAAGACTTCGCGCCACCCATTCTGAAAGAG...GAGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | GGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGACACCTCAGAGCTGGAACAGGATCTGCTaGGATGCGGGGCCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPSSSSSRLACQAETPQSWNRIC*DAGPHL Trigger: CAAGTGGGGCCCCGCATCCCAGCAGATCCTGTTCCA...GCTCTGAGGTGTCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CAA 72 bp | AGCAGGCTGGTGTGCGTGTACTGGGCCACCTCAGGCTaGTGGCTGTATAAGGCGTGGGGGCTCTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLVCVYWATSG*WLYKAWGLCSW Trigger: CCAGCTGCAGAGCCCCCACGCCTTATACAGCCACAAGCCTGAGGTGGCCCAGTACACGCACACCAGCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGAGGTGCAGGAGGCAGCAGGCAGCTGTGTTGATCTAGGGCCTCAGAGCTGGGTGTGCCCTTGTTaGGGTGCTGTGACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGEVQEAAGSCVDLGPQSWVCPC*GAVTGG Trigger: CCCACCTGTCACAGCACCTCAACAAGGGCACACCCA...GCTCTGAGGCCCTAGATCAACACAGCTGCCTGCTGCCTCCTGCACCTCCCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGAGGTGCAGGAGGCAGCAGGCAGCTGTGTTGATCTAGGGCCTCAGAGCAGACACGCACCTCCGTaGCAAGGTTGGAGCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGEVQEAAGSCVDLGPQSRHAPP*QGWSLA Trigger: GGCTAGGCTCCAACCTTGTCACGGAGGTGCGTGTCT...GCTCTGAGGCCCTAGATCAACACAGCTGCCTGCTGCCTCCTGCACCTCCCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGTCCACAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGGGCCATGGTTGCCATaGAGGGGCTCTGGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: MVVHNTAQIGPSSSSSRLGPWLP*RGSGPR Trigger: ACGTGGCCCAGAGCCCCTTCATGGCAACCATGGCCC...GAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | GATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGGACAGGATCTGCTGGGATaGGGGGCCCCACTTGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: DGLQVQSWGWEKGWLGRGQDLLG*GAPLEP Trigger: CGGTTCAAGTGGGGCCCCGCATCCCAGCAGATCCTG...TCCCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTATAAGGCGTGGGGGCTCTGCAGCTGGGCCATGGTTGCCATGAAGGGGGGCTCCCCCAAGGCCTaGATCAGGGCCTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLYKAWGLCSWAMVAMKGGSPKA*IRASLL Trigger: GAGCAAAGAGGCCCTGATCCAGGCCTTGGGGGAGCC...CCCCTTCATGGCAACCATGGCCCAGCTGCAGAGCCCCCACGCCTTATACAGCCA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTCCTGGGAGCGTTATAGGTGTCCATaGCCAACTTGTGCCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPHPLCRQCRPWGPSSWERYRCP*PTCAGR Trigger: CCTTCCGGCACAAGTTGGCCATGGACACCTATAACG...CTCCCAGGAGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCGGCTGGGGATGTGGATaGTGGTGGCTGGAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QYCPDWAVLQLLEARLSGGWGCG*WWLERV Trigger: CACCCTCTCCAGCCACCACCATCCACATCCCCAGCC...GCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGCCTGCCCTGCGTGGGTaGATTGCTGAGCCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGLQVQSWGWEKGWLGRPALRG*IAEPPL Trigger: GAGAGGTGGCTCAGCAATTCACCCACGCAGGGCAGG...CCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGATCAATCAGTCCGCCCTaGCCTGCGTGGGTGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPRLGRPPAPRGSLVRLRSISPP*PAWVNC Trigger: GCAATTCACCCACGCAGGGCAGGGCGGACTGATTGA...TCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | ACAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGACAGGCACGCTCTGTaGCTGAGTGGAGGCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TDGLQVQSWGWEKGWLGRDRHAL*LSGGQT Trigger: GGTCTGGCCTCCACTCAGGCACAGAGCGTGCCTGTC...CCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCATGGGCTCCCCCAAGGCCTaGATCAGGGCCTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSGWENWTGCSVVRLLPMGSPKA*IRASLL Trigger: GAGCAAAGAGGCCCTGATCCAGGCCTTGGGGGAGCC...CATGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCATGCTGTGTGGGCTGCCTCCTCTaGGCTGAGGTTCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVGKTGPAAAWSGYSPCCVGCLL*AEVLQL Trigger: GAGCTGGAGAACCTCAGCCCAGAGGAGGCAGCCCAC...ACAGCATGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCGTAGACTTCTGGGAAGGCCAGCAGCCTGTGTCAGGTGGCATGGCAGGCTCCACCACGGCTTTCTaGTGGGCTGCCTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECVDFWEGQQPVSGGMAGSTTAF*WAASSG Trigger: CCCAGAGGAGGCAGCCCACCAGAAAGCCGTGGTGGA...GCCTGCCATGCCACCTGACACAGGCTGCTGGCCTTCCCAGAAGTCTACGCATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | GATGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCATCCACCACGGCTTTCTaGTGGGCTGCCTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DAVVGKTGPAAAWSGYSPSTTAF*WAASSG Trigger: CCCAGAGGAGGCAGCCCACCAGAAAGCCGTGGTGGA...TGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| CDS-3UTR CCA 90 bp | AGACCGATAACCAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGAGTGTGACAGGTGGGACTaGTTGAGACCCGTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPITRVEAPVFVNVGPRECDRWD*LRPVVS Trigger: GGACACCACGGGTCTCAACCAGTCCCACCTGTCACA...CTCCCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTGGTTATCGGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGAACGCCCCTTCTTAGTTaGCAGCTCATCGCCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRLGRPPAPRGSLVRLRTPLLS*QLIACG Trigger: CCCACAGGCGATGAGCTGCCAACTAAGAAGGGGCGT...TCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGCTGGTGTGCGTGTACTaGGCCACCTCAGGCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QMACKCSPGAGRRDGLVGLVCVY*ATSGLW Trigger: CCACAAGCCTGAGGTGGCCCAGTACACGCACACCAG...CCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | GAATGCGTAGACTTCTGGGAAGGCCAGCAGCCTGTGTCAGGTGGCATGGCAGGCGAAGCCCGGGCTCACTaGAGGCCTCTGTGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ECVDFWEGQQPVSGGMAGEARAH*RPLCLR Trigger: CCTCAGACACAGAGGCCTCCAGTGAGCCCGGGCTTC...GCCTGCCATGCCACCTGACACAGGCTGCTGGCCTTCCCAGAAGTCTACGCATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | GATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGGAGGATGTGGATGGTGGTaGCTGGAGAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DGLQVQSWGWEKGWLGRGGCGWW*LERVAR Trigger: ACGAGCCACCCTCTCCAGCCACCACCATCCACATCC...TCCCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGAGACACTATGGTTGGATaGCAGCAGGTGGCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRLGRPPAPRGSLVRLRDTMVG*QQVAVP Trigger: GGGCACAGCCACCTGCTGCCATCCAACCATAGTGTC...TCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR TCA 90 bp | CTGCTGATAGGAGGGATGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCCTGCCCTGCGTGGGTaGATTGCTGAGCCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLIGGMQWLGKLDRLQRGPALRG*IAEPPL Trigger: GAGAGGTGGCTCAGCAATTCACCCACGCAGGGCAGG...ACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCATCCCTCCTATCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGTAGGAAATCCCCGTGGTGGGGAGGGTAATCCTCAAACAGGCACGTGGGGCACGCTCTGTGCCTaGGTGGAGGCCAGACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: SWVGNPRGGEGNPQTGTWGTLCA*VEARPI Trigger: TATCGGTCTGGCCTCCACTCAGGCACAGAGCGTGCC...CCACGTGCCTGTTTGAGGATTACCCTCCCCACCACGGGGATTTCCTACCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | GGATGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCGCCAGGAGCTCCGTCTaGAGCTGGCTCAGCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCSGWENWTGCSVVRLLPARSSV*SWLSLE Trigger: TTCTAAGCTGAGCCAGCTGCAGACGGAGCTCCTGGC...GGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGATCCATGGCCAACTTGTaGCGGAAGGCTTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPRLGRPPAPRGSLVRLRSMANL*RKASSL Trigger: CAAGGAGGAAGCCTTCCGGCACAAGTTGGCCATGGA...TCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGTCTGAGGTGAAGACCTaGTTGGTGGGTGTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAQIGPSSSSSRLACQAESEVKT*LVGVRL Trigger: CAGCCTCACACCCACCAAGCAGGTCTTCACCTCAGA...CTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTTCCCTGCAGTAGGCCCGAGGAGACAGTCATGTGTGCTGTGTTTCCCTGTGGGCTGCCTCCTCTaGGCTGAGGTTCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARFPAVGPRRQSCVLCFPVGCLL*AEVLQL Trigger: GAGCTGGAGAACCTCAGCCCAGAGGAGGCAGCCCAC...AGGGAAACACAGCACACATGACTGTCTCCTCGGGCCTACTGCAGGGAACCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGATACTTGGTGTAAGGCCGCAGACACTGTGACTAAGGGACCTCCGCTGTCCACCACGGCTTTCTaGTGGGCTGCCTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGDTWCKAADTVTKGPPLSTTAF*WAASSG Trigger: CCCAGAGGAGGCAGCCCACCAGAAAGCCGTGGTGGA...CAGCGGAGGTCCCTTAGTCACAGTGTCTGCGGCCTTACACCAAGTATCCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCATGCTGTTGGAACAGGATCTGCTaGGATGCGGGGCCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVGKTGPAAAWSGYSPCCWNRIC*DAGPHL Trigger: CAAGTGGGGCCCCGCATCCCAGCAGATCCTGTTCCA...ACAGCATGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR CCA 90 bp | ACAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGTGGCTGAGACCAGCTTaGCCTCTGTGCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDGLQVQSWGWEKGWLGRWLRPA*PLCSAG Trigger: GCCTGCTGAGCACAGAGGCCAAGCTGGTCTCAGCCA...CCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCTCATAGCAGGAAGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGGCCATGAAGGGGCTCTaGGCCACGTGGCTCTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: GLPHSRKEVVRGLQAEEWAMKGL*ATWLCT Trigger: CGTACAGAGCCACGTGGCCCAGAGCCCCTTCATGGC...CCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCTTCCTGCTATGAGGGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | ATGGTGGTCCACAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCTTGGATGGCAGCAGGTaGCTGTGCCCGTTGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MVVHNTAQIGPSSSSSRLLDGSR*LCPLES Trigger: CGACTCCAACGGGCACAGCCACCTGCTGCCATCCAA...GAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CAA 72 bp | CCCCCAGGCCACTTAGGTGGCTTCTCTCTGCTGGTCTaGGTACCCTCTCCACTAGACACTGCCCAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGHLGGFSLLV*VPSPLDTAQAL Trigger: CAAGGCCTGGGCAGTGTCTAGTGGAGAGGGTACCAAGACCAGCAGAGAGAAGCCACCTAAGTGGCCTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | GGTCTCCCTCATAGCAGGAAGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGGCTGCAAGTACGACTTaGCCATCTTCGCCACGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLPHSRKEVVRGLQAEEWAASTT*PSSPRA Trigger: GGCGCGTGGCGAAGATGGTCAAGTCGTACTTGCAGC...CCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCTTCCTGCTATGAGGGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | AAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGGCTGCAAGTACGACTTaGCCATCTTCGCCACGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVLRLLVETRRCLLQAVQAASTT*PSSPRA Trigger: GGCGCGTGGCGAAGATGGTCAAGTCGTACTTGCAGC...CTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR TCA 90 bp | AGTGGATGCAAGTTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGTGCTGTCAGGGTGCTaGCGGGAGGCAGGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGCKLPGWHQKTHPREQMVLSGC*REAGDP Trigger: GGGGTCCCCTGCCTCCCGTCAGCACCCTGACAGCAC...CATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGCATCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | ATGGTGGTCCACAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCCAGGAGCTCCGTCTaGAGCTGGCTCAGCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MVVHNTAQIGPSSSSSRLARSSV*SWLSLE Trigger: TTCTAAGCTGAGCCAGCTGCAGACGGAGCTCCTGGC...GAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | CCTGGGGAGGTGCAGGAGGCAGCAGGCAGCTGTGTTGATCTAGGGCCTCAGAGCTGGGGGATGTTGTGCTaGTGCAAGTACGACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PGEVQEAAGSCVDLGPQSWGMLC*CKYDLT Trigger: GGTCAAGTCGTACTTGCAGCAGCACAACATCCCCCA...GCTCTGAGGCCCTAGATCAACACAGCTGCCTGCTGCCTCCTGCACCTCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | ACCCCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTGCTGGTTGAGACCCGGATCAATCAGTCCGCCCTaGCCTGCGTGGGTGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSEAMIRFCGCWLRPGSISPP*PAWVNC Trigger: GCAATTCACCCACGCAGGGCAGGGCGGACTGATTGA...TCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR GCA 90 bp | AAGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGATTGTCCATGGTGTGGTCAAGGCGTGGGGGCTCTaGAGCTGGGCCATGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEVVRGLQAEEWIVHGVVKAWGL*SWAMVA Trigger: GGCAACCATGGCCCAGCTGCAGAGCCCCCACGCCTT...GACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | GCCATGATAAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCATCAGGTAGGGCCCTaGCTCCCCCAAGGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AMIRFCGCWLRPGDVCSKHQVGP*LPQGLD Trigger: ATCCAGGCCTTGGGGGAGCCAGGGCCCTACCTGATG...CTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR CCA 90 bp | GGATGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCCCAGCTCTTTCAGAATaGGTGGCGCGAAGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GCSGWENWTGCSVVRLLPPALSE*VARSLP Trigger: GGGAAGACTTCGCGCCACCCATTCTGAAAGAGCTGG...GGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCATCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR CCA 90 bp | GAATGCGTAGACTTCTGGGAAGGCCAGCAGCCTGTGTCAGGTGGCATGGCAGGCTGTGACAGGTGGGACTaGTTGAGACCCGTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ECVDFWEGQQPVSGGMAGCDRWD*LRPVVS Trigger: GGACACCACGGGTCTCAACCAGTCCCACCTGTCACA...GCCTGCCATGCCACCTGACACAGGCTGCTGGCCTTCCCAGAAGTCTACGCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | CTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGCTGTAGGTGCTGTGACAGGTaGGACTGGTTGAGACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLVETRRCLLQAVQCCRCCDR*DWLRPV Trigger: CACGGGTCTCAACCAGTCCCACCTGTCACAGCACCT...ACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR CCA 90 bp | TGCAGTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCATGGCAGCTCATCGCCTGTaGGCTCTTCAATCAGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSGWENWTGCSVVRLLPMAAHRL*ALQSVR Trigger: GCGGACTGATTGAAGAGCCCACAGGCGATGAGCTGC...CATGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR CCA 90 bp | CTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCAGTCCTGGTACTGGGAGAGAGGGTaGTTGTGGGCAGGCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LASEDTSKGTDGLQVQSWYWERG*LWAGRG Trigger: CCCCCGGCCTGCCCACAACCACCCTCTCTCCCAGTA...CCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CAA 72 bp | AAACAGCAGGGATGGTGGTCCACAATACTGCCCAGATaGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGWWSTILPR*GRPPAPRGSLV Trigger: GACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCATCCCTGCTGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CAA 72 bp | TGCTTGGTGGGTGTGAGGCTGGCAAGGGTGCTGAGGTaGGTGTCTGTGATCAACATGGTCTGCGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVGVRLARVLR*VSVINMVCGSR Trigger: CCTGCTCCCGCAGACCATGTTGATCACAGACACCAACCTCAGCACCCTTGCCAGCCTCACACCCACCAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| CDS-3UTR TCA 90 bp | GTTGGCCGTAGGCTACAGTCCAGGATGACAAAGGAGCTGGCTGAAGGCCAGGTTACAGGTGGGACTGGTTaGGACCCGTGGTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRRLQSRMTKELAEGQVTGGTG*DPWCPP Trigger: TGGTGGACACCACGGGTCTCAACCAGTCCCACCTGT...AACCTGGCCTTCAGCCAGCTCCTTTGTCATCCTGGACTGTAGCCTACGGCCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | GCCATGATAAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGTGGGTGTGCCCTTGTTaGGGTGCTGTGACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMIRFCGCWLRPGDVCSKWVCPC*GAVTGG Trigger: CCCACCTGTCACAGCACCTCAACAAGGGCACACCCA...CTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR GCA 90 bp | GTGGGGGATACTTGGTGTAAGGCCGCAGACACTGTGACTAAGGGACCTCCGCTGGCCAGGAGCTCCGTCTaGAGCTGGCTCAGCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGDTWCKAADTVTKGPPLARSSV*SWLSLE Trigger: TTCTAAGCTGAGCCAGCTGCAGACGGAGCTCCTGGC...CAGCGGAGGTCCCTTAGTCACAGTGTCTGCGGCCTTACACCAAGTATCCCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR GCA 90 bp | GATAAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGGGCTTTCTGGTGGGCTaGCTCCTCTGGGCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DKVLRLLVETRRCLLQAVGFLVG*LLWAEV Trigger: AACCTCAGCCCAGAGGAGGCAGCCCACCAGAAAGCC...CACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR GCA 90 bp | CTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGCTGTCGCTGGGGGATGTTGTaGTGCTGCAAGTACGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLVETRRCLLQAVQCCRWGML*CCKYDL Trigger: CAAGTCGTACTTGCAGCAGCACAACATCCCCCAGCG...ACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR GCA 90 bp | CTTCTGGGAAGGCCAGCAGCCTGTGTCAGGTGGCATGGCAGGCTCAGATATCCTGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGRPAACVRWHGRLRYPVCSKL*SAVRVL Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...AGGATATCTGAGCCTGCCATGCCACCTGACACAGGCTGCTGGCCTTCCCAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | GCCAGGTTCCCTGCAGTAGGCCCGAGGAGACAGTCATGTGTGCTGTGTTTCCCTGAAAACTGGACCGGCTaGAGCGTGGTCAGGCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: ARFPAVGPRRQSCVLCFPENWTG*SVVRLL Trigger: GAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTC...AGGGAAACACAGCACACATGACTGTCTCCTCGGGCCTACTGCAGGGAACCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | ATGGTGGTCCACAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGATACAACACCAGGCTaGTGGAGGACACTGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MVVHNTAQIGPSSSSSRLDTTPG*WRTLWD Trigger: GTCCCACAGTGTCCTCCAGCAGCCTGGTGTTGTATC...GAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | GTGGTTGGGAAAACTGGACCGGCTGCAGCGTGGTCAGGCTACTCCCCATGCTGTCAGTCCGCCCTGCCCTaGGTGGGTGAATTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVGKTGPAAAWSGYSPCCQSALP*VGEFEE Trigger: TTCTTCAAATTCACCCACGCAGGGCAGGGCGGACTG...ACAGCATGGGGAGTAGCCTGACCACGCTGCAGCCGGTCCAGTTTTCCCAACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCTCATAGCAGGAAGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGCCGTACCGTACACCGTaGACCTTACTGGGAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPHSRKEVVRGLQAEEWPYRTP*TLLGER Trigger: CCTCTCTCCCAGTAAGGTCCACGGTGTACGGTACGG...CCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCTTCCTGCTATGAGGGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | GTTGGCCGTAGGCTACAGTCCAGGATGACAAAGGAGCTGGCTGAAGGCCAGGTTTGGGGGCTCTGCAGCTaGGCCATGGTTGCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGRRLQSRMTKELAEGQVWGLCS*AMVAMK Trigger: CTTCATGGCAACCATGGCCCAGCTGCAGAGCCCCCA...AACCTGGCCTTCAGCCAGCTCCTTTGTCATCCTGGACTGTAGCCTACGGCCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCTCTGCGGGAGCAGGCTaGTGTGCGTGTACTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGWHQKTHPREQMACKCSAGAG*CACTGP Trigger: TGGCCCAGTACACGCACACCAGCCTGCTCCCGCAGA...GCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | AAGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGATTGTCCATGGTGTGGTCTCGACGGGTCCTGGCTaGGGATGTGGATGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEVVRGLQAEEWIVHGVVSTGPG*GCGWWW Trigger: CCACCACCATCCACATCCCCAGCCAGGACCCGTCGA...GACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | CAGATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGGTCTCGATGACACTATaGTTGGATGGCAGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QMACKCSPGAGRRDGLVGVSMTL*LDGSRW Trigger: CCACCTGCTGCCATCCAACCATAGTGTCATCGAGAC...CCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | ATGGTGGTCCACAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCTTGGAGTCGGAACTCTaGTACAACACCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MVVHNTAQIGPSSSSSRLLESEL*YNTRLL Trigger: CAGCAGCCTGGTGTTGTATCAGAGTTCCGACTCCAA...GAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | GTCATGTGTGCTGTGTTTCCCTGGGCTGCTCGGGACCCAGGATTTCTCAGAATGGGCTTTCTGGTGGGCTaGCTCCTCTGGGCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VMCAVFPWAARDPGFLRMGFLVG*LLWAEV Trigger: AACCTCAGCCCAGAGGAGGCAGCCCACCAGAAAGCC...CATTCTGAGAAATCCTGGGTCCCGAGCAGCCCAGGGAAACACAGCACACATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | GTTGGCCGTAGGCTACAGTCCAGGATGACAAAGGAGCTGGCTGAAGGCCAGGTTGTGATCAACATGGTCTaGGGGAGCAGGCTGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRRLQSRMTKELAEGQVVINMV*GSRLVC Trigger: GCACACCAGCCTGCTCCCGCAGACCATGTTGATCAC...AACCTGGCCTTCAGCCAGCTCCTTTGTCATCCTGGACTGTAGCCTACGGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | AAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTCAATCAGTCCGCCCTaGCCTGCGTGGGTGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVLRLLVETRRCLLQAVQSISPP*PAWVNL Trigger: CAAATTCACCCACGCAGGGCAGGGCGGACTGATTGA...CTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| CDS-3UTR CCA 90 bp | CTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGCTGTCTCTTTCAGAATGGGTaGCGCGAAGTCTTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLVETRRCLLQAVQCCLFQNG*REVFPI Trigger: GATGGGGAAGACTTCGCGCCACCCATTCTGAAAGAG...ACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCTCATAGCAGGAAGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGCCAGCTCTTTCAGAATaGGTGGCGCGAAGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLPHSRKEVVRGLQAEEWPALSE*VARSLP Trigger: GGGAAGACTTCGCGCCACCCATTCTGAAAGAGCTGG...CCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCTTCCTGCTATGAGGGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGAGGTTGGTGTCTGTGATCAACATGGTCTGCGGGAGCAGGCTGGTGTGCCCAGCTCTTTCAGAATaGGTGGCGCGAAGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLRLVSVINMVCGSRLVCPALSE*VARSLP Trigger: GGGAAGACTTCGCGCCACCCATTCTGAAAGAGCTGG...GCACACCAGCCTGCTCCCGCAGACCATGTTGATCACAGACACCAACCTCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGGAAGGCCAGCAGCCTGTGTCAGGTGGCATGGCAGGCTCAGATATCCTCCTGTGGGGGATACTTaGTGTAAGGCCGCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: LLGRPAACVRWHGRLRYPPVGDT*CKAADT Trigger: AGTGTCTGCGGCCTTACACCAAGTATCCCCCACAGG...AGGATATCTGAGCCTGCCATGCCACCTGACACAGGCTGCTGGCCTTCCCAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | CTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCAGTCCTGGTGGGGATGTGGATGGTaGTGGCTGGAGAGGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LASEDTSKGTDGLQVQSWWGCGW*WLERVA Trigger: AGCCACCCTCTCCAGCCACCACCATCCACATCCCCA...CCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGCCTACAGGCAGAGGAGTGGATTGTCCATGGTGTGGTCTTGGCATGAGATGTTCGACGGGTCCTaGCTGGGGATGTGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGAYRQRSGLSMVWSWHEMFDGS*LGMWMV Trigger: CACCATCCACATCCCCAGCCAGGACCCGTCGAACAT...CTCATGCCAAGACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| 3UTR CAA 72 bp | GGTAGCGAGGCCATGATAAGGTTCTGCGGCTGCTGGTaGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSEAMIRFCGCW*RPGDVCSKLCS Trigger: ACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR GCA 90 bp | ATGGTGGTCCACAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGGGATGTTGTGCTGCTaGAAGTACGACTTGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: MVVHNTAQIGPSSSSSRLGMLCC*KYDLTI Trigger: GATGGTCAAGTCGTACTTGCAGCAGCACAACATCCC...GAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGGGATGTTGTGCTGCTaGAAGTACGACTTGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSEAMIRFCGCWLRPGGMLCC*KYDLTI Trigger: GATGGTCAAGTCGTACTTGCAGCAGCACAACATCCC...TCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTCTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGGGGGATGTTGTGCTaGTGCAAGTACGACTTGACC | + |
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Preference number: 4 (lower is better) Translates to: KVLRLLVETRRCLLQAVQWGMLC*CKYDLT Trigger: GGTCAAGTCGTACTTGCAGCAGCACAACATCCCCCA...CTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAGAACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGGATACTTGGTGTAAGGCCGCAGACACTGTGACTAAGGGACCTCCGCTGCTCTTTCAGAATGGGTaGCGCGAAGTCTTCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: VGDTWCKAADTVTKGPPLLFQNG*REVFPI Trigger: GATGGGGAAGACTTCGCGCCACCCATTCTGAAAGAG...CAGCGGAGGTCCCTTAGTCACAGTGTCTGCGGCCTTACACCAAGTATCCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR CCA 90 bp | CTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCAGTCCTGGTGGGCTCCAGGCCTGTaGGGGATACTTGGTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: LASEDTSKGTDGLQVQSWWAPGL*GILGVR Trigger: CCTTACACCAAGTATCCCCCACAGGCCTGGAGCCCA...CCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCGTCCTCCTGAAGAAGTaGCTCCACCACGGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPGWHQKTHPREQMACKCVLLKK*LHHGFL Trigger: CAGAAAGCCGTGGTGGAGTCACTTCTTCAGGAGGAC...GCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | AAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGATTGTCCATGGTGTGGTCTTGGCTTGTTGAGGTGCTGTaGCAGGTGGGACTGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KLSGAYRQRSGLSMVWSWLVEVL*QVGLVE Trigger: CTCAACCAGTCCCACCTGTCACAGCACCTCAACAAG...CCAAGACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGACAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | CTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCAGTCCTGGCGCTGGGGGATGTTGTaGTGCTGCAAGTACGACTTG | + |
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Preference number: 4 (lower is better) Translates to: LASEDTSKGTDGLQVQSWRWGML*CCKYDL Trigger: CAAGTCGTACTTGCAGCAGCACAACATCCCCCAGCG...CCAGGACTGCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | ATGGTGTGGTCTTGGCATGAGTTGCAGGTCCTAAGGAACAGGGATGACAACCCGGGAAGGCTTCCTCCTTaGGCCGGTTGGCAAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: MVWSWHELQVLRNRDDNPGRLPP*AGWQTS Trigger: ACTGGTTTGCCAACCGGCGCAAGGAGGAAGCCTTCC...CGGGTTGTCATCCCTGTTCCTTAGGACCTGCAACTCATGCCAAGACCACACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR GCA 90 bp | AAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGATTGTCCATGGTGTGGTCTTGGGCCATGATAAGGTTCTaGGGCTGCTGGTTGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: KLSGAYRQRSGLSMVWSWAMIRF*GCWLRP Trigger: GGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGC...CCAAGACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGACAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | ATGGTGTGGTCTTGGCATGAGTTGCAGGTCCTAAGGAACAGGGATGACAACCCGCACCGTGGACCTTACTaGGAGAGAGGGTGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: MVWSWHELQVLRNRDDNPHRGPY*ERGWLW Trigger: CCACAACCACCCTCTCTCCCAGTAAGGTCCACGGTG...CGGGTTGTCATCCCTGTTCCTTAGGACCTGCAACTCATGCCAAGACCACACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | AGTGGATGCAAGTTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGTGGATGGTGGTGGCTaGAGAGGGTGGCTCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGCKLPGWHQKTHPREQMVDGGG*RGWLVK Trigger: CTTCACGAGCCACCCTCTCCAGCCACCACCATCCAC...CATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGCATCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CAA 72 bp | AGGAAGTTGTCAGGGGCCTACAGGCAGAGGAGTGGATaGTCCATGGTGTGGTCTTGGCATGAGTTGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RKLSGAYRQRSG*SMVWSWHELQV Trigger: GACCTGCAACTCATGCCAAGACCACACCATGGACAATCCACTCCTCTGCCTGTAGGCCCCTGACAACTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CCA 90 bp | AGTGGATGCAAGTTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGCAGCTCATCGCCTGTaGGCTCTTCAATCAGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SGCKLPGWHQKTHPREQMAAHRL*ALQSVR Trigger: GCGGACTGATTGAAGAGCCCACAGGCGATGAGCTGC...CATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGCATCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CAA 72 bp | AGGAGTGGATTGTCCATGGTGTGGTCTTGGCATGAGTaGCAGGTCCTAAGGAACAGGGATGACAACCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: RSGLSMVWSWHE*QVLRNRDDNPS Trigger: GCTCGGGTTGTCATCCCTGTTCCTTAGGACCTGCAACTCATGCCAAGACCACACCATGGACAATCCACTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| 3UTR CAA 72 bp | ATCTGGGTGGAGATAAAAGTCTCGATGACACTATGGTaGGATGGCAGCAGGTGGCTGTGCCCGTTGGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: IWVEIKVSMTLW*DGSRWLCPLES Trigger: CGACTCCAACGGGCACAGCCACCTGCTGCCATCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| CDS-3UTR CCA 90 bp | AGTGGATGCAAGTTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGAAGAGGAGGCCATCTaGGTGGAGATAAAAGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: SGCKLPGWHQKTHPREQMEEEAI*VEIKVS Trigger: CGAGACTTTTATCTCCACCCAGATGGCCTCCTCTTC...CATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAACTTGCATCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | AAATTTCCTATTCTAAACAGCAGGGATGGTGGTCCACAATACTGCCCAGATTGGCCTCTGTGTCTGAGGTaGAGACCTGCTTGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KFPILNSRDGGPQYCPDWPLCLR*RPAWWV Trigger: CACCCACCAAGCAGGTCTTCACCTCAGACACAGAGG...CCAATCTGGGCAGTATTGTGGACCACCATCCCTGCTGTTTAGAATAGGAAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | AAATTTCCTATTCTAAACAGCAGGGATGGTGGTCCACAATACTGCCCAGATTGGGGAGGCCTCTGTGTCTaGGGTGAAGACCTGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: KFPILNSRDGGPQYCPDWGGLCV*GEDLLG Trigger: ACCAAGCAGGTCTTCACCTCAGACACAGAGGCCTCC...CCAATCTGGGCAGTATTGTGGACCACCATCCCTGCTGTTTAGAATAGGAAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGAGGCCATCTGGGTGGAGATAAAAGTCTCGATGACACTATGGTTGGAGTGAATTTGAAGAAGTaGCTCCACCACGGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GRGGHLGGDKSLDDTMVGVNLKK*LHHGFL Trigger: CAGAAAGCCGTGGTGGAGTCACTTCTTCAAATTCAC...TCCAACCATAGTGTCATCGAGACTTTTATCTCCACCCAGATGGCCTCCTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| CDS-3UTR CAA 90 bp | CAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGAGGCAGGCTCCCCGACAGGTGGGACTGGTaGAGACCCGTGGTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: QGGGARVRERGSQGGRLPDRWDW*RPVVST Trigger: GGTGGACACCACGGGTCTCAACCAGTCCCACCTGTC...GGGGAGCCTGCCTCCCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR CAA 90 bp | GCTGCGGCCCTCCTCACCCCCTATGCAGGCAGTGCAGGCCCTGGGGACCCAGCTTTCATGGGTGTGCCCTaGTTGAGGTGCTGTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: AAALLTPYAGSAGPGDPAFMGVP*LRCCDR Trigger: CCTGTCACAGCACCTCAACAAGGGCACACCCATGAA...AGCTGGGTCCCCAGGGCCTGCACTGCCTGCATAGGGGGTGAGGAGGGCCGCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CAA 90 bp | CAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGAGGCAGGCTCCCCTTCATGGGTGTGCCCTaGTTGAGGTGCTGTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: QGGGARVRERGSQGGRLPFMGVP*LRCCDR Trigger: CCTGTCACAGCACCTCAACAAGGGCACACCCATGAA...GGGGAGCCTGCCTCCCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR CAA 90 bp | ATAACCAGGGTGGAGGCGCCCGTGTTCGTGAACGTGGGTCCCAGGGAGGCAGGCTGGATCAGGGCCTCTTaGCTCAGGCCAGACTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: ITRVEAPVFVNVGPREAGWIRAS*LRPDSS Trigger: GCTCGAGTCTGGCCTGAGCAAAGAGGCCCTGATCCA...GCCTGCCTCCCTGGGACCCACGTTCACGAACACGGGCGCCTCCACCCTGGTTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGTAGCGAGGCCATGATAAGGTTCTGCGGCTGCTGGTTGAGACCCGGACCGCAGGACTCCCCCTaGTCCAGGGGACCCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TPGSEAMIRFCGCWLRPGPQDSP*SRGPSP Trigger: TGGAGAGGGTCCCCTGGACAAGGGGGAGTCCTGCGG...TCCGGGTCTCAACCAGCAGCCGCAGAACCTTATCATGGCCTCGCTACCTGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGATGGATCAGGGCCTCTTaGCTCAGGCCAGACTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: LPRLGRPPAPRGSLVRLRWIRAS*LRPDSS Trigger: GCTCGAGTCTGGCCTGAGCAAAGAGGCCCTGATCCA...TCTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CAA 90 bp | ACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCGCTTGTCAGGCTGAGTGGGCCACCTCAGGCTaGTGGCTGTATAAGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: TAQIGPSSSSSRLACQAEWATSG*WLYKAW Trigger: CCACGCCTTATACAGCCACAAGCCTGAGGTGGCCCA...CTCAGCCTGACAAGCGAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CAA 90 bp | AGCCCGGGCTCACTGGAGGCCTCTGTGTCTGAGGTGAAGACCTGCTTGGTGGGTTGGATCAGGGCCTCTTaGCTCAGGCCAGACTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SPGSLEASVSEVKTCLVGWIRAS*LRPDSS Trigger: GCTCGAGTCTGGCCTGAGCAAAGAGGCCCTGATCCA...ACCCACCAAGCAGGTCTTCACCTCAGACACAGAGGCCTCCAGTGAGCCCGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| CDS-3UTR CAA 90 bp | ATGGTGGTCCACAATACTGCCCAGATTGGGCCGTCCTCCAGCTCCTCGAGGCTCCGGAAGGCTTCCTCCTaGCGCCGGTTGGCAAACCAG | + |
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Preference number: 5 (lower is better) Translates to: MVVHNTAQIGPSSSSSRLRKASS*RRLANQ Trigger: CTGGTTTGCCAACCGGCGCAAGGAGGAAGCCTTCCG...GAGCCTCGAGGAGCTGGAGGACGGCCCAATCTGGGCAGTATTGTGGACCACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCCCGCAGGACTCCCCCTaGTCCAGGGGACCCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LPGWHQKTHPREQMACKCPQDSP*SRGPSP Trigger: TGGAGAGGGTCCCCTGGACAAGGGGGAGTCCTGCGG...GCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CAA 90 bp | GATGGCCTGCAAGTGCAGTCCTGGGGCTGGGAGAAGGGATGGCTTGGTAGGGGATGCTGCAAGTACGACTaGACCATCTTCGCCACGCGC | + |
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Preference number: 5 (lower is better) Translates to: DGLQVQSWGWEKGWLGRGCCKYD*TIFATR Trigger: GCGCGTGGCGAAGATGGTCAAGTCGTACTTGCAGCA...TCCCCTACCAAGCCATCCCTTCTCCCAGCCCCAGGACTGCACTTGCAGGCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CAA 90 bp | AGCTGGGTAGGAAATCCCCGTGGTGGGGAGGGTAATCCTCAAACAGGCACGTGGGACAGGTGGGACTGGTaGAGACCCGTGGTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: SWVGNPRGGEGNPQTGTWDRWDW*RPVVST Trigger: GGTGGACACCACGGGTCTCAACCAGTCCCACCTGTC...CCACGTGCCTGTTTGAGGATTACCCTCCCCACCACGGGGATTTCCTACCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS TCA 90 bp | GAAGTGACTCCACCACGGCTTTCTGGTGGGCTGCCTCCTCTGGGCTaGGGTTCTCCAGCTCTTTCAGAATGGGTGGCGCGAAGTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVTPPRLSGGLPPLG*GSPALSEWVARSLP Trigger: GGGAAGACTTCGCGCCACCCATTCTGAAAGAGCTGGAGAACCTCAGCCCAGAGGAGGCAGCCCACCAGAAAGCCGTGGTGGAGTCACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031535.12 ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS-3UTR CAA 90 bp | CTGCGGCTGCTGGTTGAGACCCGGAGATGTCTGCTCCAAGCTGTGCAGTGCTGTTGCTGCAAGTACGACTaGACCATCTTCGCCACGCGC | + |
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Preference number: 5 (lower is better) Translates to: LRLLVETRRCLLQAVQCCCCKYD*TIFATR Trigger: GCGCGTGGCGAAGATGGTCAAGTCGTACTTGCAGCA...ACAGCACTGCACAGCTTGGAGCAGACATCTCCGGGTCTCAACCAGCAGCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176550.2 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGCTGGCATCAGAAGACACATCCAAGGGAACAGATGGCCTGCAAGTGCGAGGTGAAGACCTGCTaGGTGGGTGTGAGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGWHQKTHPREQMACKCEVKTC*VGVRLA Trigger: TGCCAGCCTCACACCCACCAAGCAGGTCTTCACCTC...GCACTTGCAGGCCATCTGTTCCCTTGGATGTGTCTTCTGATGCCAGCCTGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS-3UTR CAA 90 bp | AGCTGGGTAGGAAATCCCCGTGGTGGGGAGGGTAATCCTCAAACAGGCACGTGGTCGATGACACTATGGTaGGATGGCAGCAGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SWVGNPRGGEGNPQTGTWSMTLW*DGSRWL Trigger: CAGCCACCTGCTGCCATCCAACCATAGTGTCATCGA...CCACGTGCCTGTTTGAGGATTACCCTCCCCACCACGGGGATTTCCTACCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031535.12 |
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| CDS TCA 72 bp | CCACCACGGCTTTCTGGTGGGCTGCCTCCTCTGGGCTaGGGTTCTCCAGCTCTTTCAGAATGGGTGGCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PPRLSGGLPPLG*GSPALSEWVAR Trigger: TCGCGCCACCCATTCTGAAAGAGCTGGAGAACCTCAGCCCAGAGGAGGCAGCCCACCAGAAAGCCGTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031535.12 ENSMUST00000176550.2 ENSMUST00000176911.8 |
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| CDS TCA 72 bp | AGTCCGCCCTGCCCTGCGTGGGTGAATTTGAAGAAGTaGCTCCACCACGGCTTTCTGGTGGGCTGCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SPPCPAWVNLKK*LHHGFLVGCLL Trigger: GAGGAGGCAGCCCACCAGAAAGCCGTGGTGGAGTCACTTCTTCAAATTCACCCACGCAGGGCAGGGCGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176911.8 |
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| CDS GCA 72 bp | ATCGCCTGTGGGCTCTTCAATCAGTCCGCCCTGCCCTaGGTGGGTGAATTGCTGAGCCACCTCTCGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: IACGLFNQSALP*VGELLSHLSLL Trigger: AAGCAGCGAGAGGTGGCTCAGCAATTCACCCACGCAGGGCAGGGCGGACTGATTGAAGAGCCCACAGGCGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031535.12 ENSMUST00000176550.2 |
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| CDS CAA 72 bp | GCGGCCCGCTTCTGTGTCTTCATGGGTGTGCCCTTGTaGAGGTGCTGTGACAGGTGGGACTGGTTGAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: AARFCVFMGVPL*RCCDRWDWLRP Trigger: GGGTCTCAACCAGTCCCACCTGTCACAGCACCTCAACAAGGGCACACCCATGAAGACACAGAAGCGGGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031535.12 ENSMUST00000176550.2 |
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| CDS CCA 72 bp | GCCCCACTTGAACCGGTTCCTACGCCCCTTCTTAGTTaGCAGCTCATCGCCTGTGGGCTCTTCAATCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: APLEPVPTPLLS*QLIACGLFNQS Trigger: GGACTGATTGAAGAGCCCACAGGCGATGAGCTGCCAACTAAGAAGGGGCGTAGGAACCGGTTCAAGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031535.12 ENSMUST00000176550.2 |
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