Pregenerated sensors for HMX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050100Ensembl transcript IDs: ENSMUST00000051997.9, ENSMUST00000183219.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCACGTGCTGCCTGGGCAGCCCCAATATCCCGACCTTTAACCTCTaGGCCCAGCCCCACCCACACGTGGTGAGAGCAGAACCTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: VTCCLGSPNIPTFNL*AQPHPHVVRAEPWG Trigger: CCCCCAAGGTTCTGCTCTCACCACGTGTGGGTGGGGCTGGGCTCAGAGGTTAAAGGTCGGGATATTGGGGCTGCCCAGGCAGCACGTGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 90 bp | AGAGGCGACCGGGTCAGCAGCCAGGCTCCTGGCTTTGTCTTTCGCTaGGCGGGGCTGTGGATCTGGATTCCATCTCGAGTGCACCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: RGDRVSSQAPGFVFR*AGLWIWIPSRVHPN Trigger: GTTGGGGTGCACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCTGCTGACCCGGTCGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 90 bp | AGCCAGGCTCCTGGCTTTGTCTTTCGCTGCGCGGGGCTGTGGATCTaGATTCCATCTCGAGTGCACCCCAACCCGCACACCTGGGTCGTG | + |
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Preference number: 1 (lower is better) Translates to: SQAPGFVFRCAGLWI*IPSRVHPNPHTWVV Trigger: CACGACCCAGGTGTGCGGGTTGGGGTGCACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 90 bp | TGCTTGGCTCATTCCCAGAGGCGACCGGGTCAGCAGCCAGGCTCCTaGCTTTGTCTTTCGCTGCGCGGGGCTGTGGATCTGGATTCCATC | + |
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Preference number: 1 (lower is better) Translates to: CLAHSQRRPGQQPGS*LCLSLRGAVDLDSI Trigger: GATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCTGCTGACCCGGTCGCCTCTGGGAATGAGCCAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 90 bp | TATTTCTTAATATTTCTGGACACGCGCCGCTCTGCTCCGGAGCTCTaGGAAGGATCCCGACCGCGCCGGGCTATGCAGGCAGCTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: YFLIFLDTRRSAPEL*EGSRPRRAMQAAAG Trigger: GCCTGCAGCTGCCTGCATAGCCCGGCGCGGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR GCA 90 bp | CGTCTAGCCCAAAACAGCCCAGTATCGGGGAGATGTTCACCTCCTTaGTTGGCTCATTCCCAGAGGCGACCGGGTCAGCAGCCAGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RLAQNSPVSGRCSPP*LAHSQRRPGQQPGS Trigger: GGAGCCTGGCTGCTGACCCGGTCGCCTCTGGGAATGAGCCAAGCAAGGAGGTGAACATCTCCCCGATACTGGGCTGTTTTGGGCTAGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 90 bp | TGGGAACTGTGCTGTTCCTGTAAGCAGCCCCAGTCACGTGCTGCCTaGGCAGCCCCAATATCCCGACCTTTAACCTCTGAGCCCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: WELCCSCKQPQSRAA*AAPISRPLTSEPSP Trigger: GGGGCTGGGCTCAGAGGTTAAAGGTCGGGATATTGGGGCTGCCCAGGCAGCACGTGACTGGGGCTGCTTACAGGAACAGCACAGTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 90 bp | CCTGACGAAGCAGTTCTCCGGGTGCAGAGCCTCCCTAACCCTGCATaGAGGCAGGCAGCCGGGCACTGCAATCCTCAGTGCTCAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: PDEAVLRVQSLPNPA*RQAAGHCNPQCSIQ Trigger: CTGAATTGAGCACTGAGGATTGCAGTGCCCGGCTGCCTGCCTCCATGCAGGGTTAGGGAGGCTCTGCACCCGGAGAACTGCTTCGTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 90 bp | GTGCAGAGCCTCCCTAACCCTGCATGGAGGCAGGCAGCCGGGCACTaGAATCCTCAGTGCTCAATTCAGAAACAGCTGCTGCAAGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: VQSLPNPAWRQAAGH*NPQCSIQKQLLQVS Trigger: GCTAACTTGCAGCAGCTGTTTCTGAATTGAGCACTGAGGATTGCAGTGCCCGGCTGCCTGCCTCCATGCAGGGTTAGGGAGGCTCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 90 bp | AATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTaGTCCGGAGCTCTGCGAAGGATCCCGACCGCGCCGGGCTATGCA | + |
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Preference number: 1 (lower is better) Translates to: NTHGVFLNISGHAPL*SGALRRIPTAPGYA Trigger: TGCATAGCCCGGCGCGGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR GCA 90 bp | AGGCAGCCGGGCACTGCAATCCTCAGTGCTCAATTCAGAAACAGCTaGTGCAAGTTAGCCAGTGATCCGACCTTTTTGTCATTCACGGGC | + |
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Preference number: 1 (lower is better) Translates to: RQPGTAILSAQFRNS*CKLASDPTFLSFTG Trigger: GCCCGTGAATGACAAAAAGGTCGGATCACTGGCTAACTTGCAGCAGCTGTTTCTGAATTGAGCACTGAGGATTGCAGTGCCCGGCTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 90 bp | GCTGAGCTTGTGTCCTACCACATTTTCTATATACAGGTGTATATATaGGAGAAAGACTGCCTGGTTCTGTTGGTGGTTTTTCTGATGTTT | + |
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Preference number: 1 (lower is better) Translates to: AELVSYHIFYIQVYI*EKDCLVLLVVFLMF Trigger: AAACATCAGAAAAACCACCAACAGAACCAGGCAGTCTTTCTCCCATATATACACCTGTATATAGAAAATGTGGTAGGACACAAGCTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTGCGAGGGCTGCAAGCCAGTCGCCTGTGGCTCTGGAACCCAAGCGGACGCCCGACCTTTAACCTCTaGGCCCAGCCCCACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: PLRGLQASRLWLWNPSGRPTFNL*AQPHPH Trigger: GTGTGGGTGGGGCTGGGCTCAGAGGTTAAAGGTCGG...GCGTCCGCTTGGGTTCCAGAGCCACAGGCGACTGGCTTGCAGCCCTCGCAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CAA 90 bp | GGCTCATTCCCAGAGGCGACCGGGTCAGCAGCCAGGCTCCTGGCTTaGTCTTTCGCTGCGCGGGGCTGTGGATCTGGATTCCATCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: GSFPEATGSAARLLA*SFAARGCGSGFHLE Trigger: CTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCTGCTGACCCGGTCGCCTCTGGGAATGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR GCA 90 bp | GATCCTGACGAAGCAGTTCTCCGGGTGCAGAGCCTCCCTAACCCTGCATGGAGGGCAGCCCCAGTCACGTaGTGCCTGGGCAGCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: DPDEAVLRVQSLPNPAWRAAPVT*CLGSPN Trigger: ATTGGGGCTGCCCAGGCAGCACGTGACTGGGGCTGC...CCTCCATGCAGGGTTAGGGAGGCTCTGCACCCGGAGAACTGCTTCGTCAGGATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CAA 90 bp | CTAGCCCAAAACAGCCCAGTATCGGGGAGATGTTCACCTCCTTGCTaGGCTCATTCCCAGAGGCGACCGGGTCAGCAGCCAGGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LAQNSPVSGRCSPPC*AHSQRRPGQQPGSW Trigger: CCAGGAGCCTGGCTGCTGACCCGGTCGCCTCTGGGAATGAGCCAAGCAAGGAGGTGAACATCTCCCCGATACTGGGCTGTTTTGGGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTCACCCCACGTTTTACTCCGCGCAGGAGGACGCCAAGAACGCCAAGAGCTCGGGTCGTGGGAACTGTaGTGTTCCTGTAAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LSPHVLLRAGGRQERQELGSWEL*CSCKQP Trigger: GGGCTGCTTACAGGAACAGCACAGTTCCCACGACCC...GAGCTCTTGGCGTTCTTGGCGTCCTCCTGCGCGGAGTAAAACGTGGGGTGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCAGCCCCACCCACACGTGGTGAGAGCAGAACCTTGGGGGCTGAGGGAGGAGGGAGAAAGACTGCCTaGTTCTGTTGGTGGTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SPAPPTRGESRTLGAEGGGRKTA*FCWWFF Trigger: GAAAAACCACCAACAGAACCAGGCAGTCTTTCTCCC...TCCTCCCTCAGCCCCCAAGGTTCTGCTCTCACCACGTGTGGGTGGGGCTGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR GCA 90 bp | CACCCCACGTTTTACTCCGCGCAGGAGGACGCCAAGAACGCCAAGAGCTCCGGCATATGGGAGAAAGACTaGCTGGTTCTGTTGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: HPTFYSAQEDAKNAKSSGIWEKD*LVLLVV Trigger: AACCACCAACAGAACCAGGCAGTCTTTCTCCCATAT...GCCGGAGCTCTTGGCGTTCTTGGCGTCCTCCTGCGCGGAGTAAAACGTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR GCA 90 bp | GATCCTGACGAAGCAGTTCTCCGGGTGCAGAGCCTCCCTAACCCTGCATGGAGGCACTGCAATCCTCAGTaGTCAATTCAGAAACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: DPDEAVLRVQSLPNPAWRHCNPQ*SIQKQL Trigger: CAGCTGTTTCTGAATTGAGCACTGAGGATTGCAGTG...CCTCCATGCAGGGTTAGGGAGGCTCTGCACCCGGAGAACTGCTTCGTCAGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CAA 90 bp | AAGAAAGAAATAGATAGGGCCTTGGCGCTGCAGACTCCTAGCTCTTaGCACCCTGATCAACCACTGAGGGGAGGCGGGCTGGACCTAATA | + |
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Preference number: 2 (lower is better) Translates to: KKEIDRALALQTPSS*HPDQPLRGGGLDLI Trigger: TATTAGGTCCAGCCCGCCTCCCCTCAGTGGTTGATCAGGGTGCAAAGAGCTAGGAGTCTGCAGCGCCAAGGCCCTATCTATTTCTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAGCCAGGCTCCTGGCTTTGTCTTTCGCTGCGCGGGGCTGTGGATCTGGAGGGAATAAAGAGAAGTaGTTAGTTCAACGACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SAARLLALSFAARGCGSGGNKEK*LVQRPK Trigger: CTTTGGTCGTTGAACTAATCACTTCTCTTTATTCCC...TCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCGGTGCATTCTTGTGTAGCATCCATCTAATGTCACCTAGGAGGAGTTGCAAGCAGTTCTCCGGGTaGAGAGCCTCCCTAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: LPGAFLCSIHLMSPRRSCKQFSG*RASLTL Trigger: CAGGGTTAGGGAGGCTCTGCACCCGGAGAACTGCTT...GCAACTCCTCCTAGGTGACATTAGATGGATGCTACACAAGAATGCACCGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CAA 90 bp | ACAGGTGGATGCTATGAAAACGTAGAGAAAATACAGTGCTGTGATTaGCATGATCCTGACGAAGCAGTTCTCCGGGTGCAGAGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TGGCYENVEKIQCCD*HDPDEAVLRVQSLP Trigger: AGGGAGGCTCTGCACCCGGAGAACTGCTTCGTCAGGATCATGCAAATCACAGCACTGTATTTTCTCTACGTTTTCATAGCATCCACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CAA 90 bp | ATTAGTTCAACGACCAAAGCCCTAGTTGGTTCGGCTCGGCTGAGCTaGTGTCCTACCACATTTTCTATATACAGGTGTATATATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ISSTTKALVGSARLS*CPTTFSIYRCIYGR Trigger: TCTCCCATATATACACCTGTATATAGAAAATGTGGTAGGACACAAGCTCAGCCGAGCCGAACCAACTAGGGCTTTGGTCGTTGAACTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTATATACAGGTGTATATATGGGAGAAAGACTGCCTGGTTCTGTTGGTGGTTCAAACGCGAGTTGTTTaGTTTTGTGTAGAAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FYIQVYIWEKDCLVLLVVQTRVV*FCVESR Trigger: CCTGCTTTCTACACAAAACCAAACAACTCGCGTTTG...AACCACCAACAGAACCAGGCAGTCTTTCTCCCATATATACACCTGTATATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR GCA 72 bp | CGAAGGATCCCGACCGCGCCGGGCTATGCAGGCAGCTaGAGGCGACCAGGGGCGTCCCGGGAGCCGGCGGGC | + |
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Preference number: 3 (lower is better) Translates to: RRIPTAPGYAGS*RRPGASREPAG Trigger: GCCCGCCGGCTCCCGGGACGCCCCTGGTCGCCTGCAGCTGCCTGCATAGCCCGGCGCGGTCGGGATCCTTCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR CCA 72 bp | GGGAGACCCCTGCGAGGGCTGCAAGCCAGTCGCCTGTaGCTCTGGAACCCAAGCGGACGCTTTCTCTCACCC | + |
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Preference number: 3 (lower is better) Translates to: GRPLRGLQASRL*LWNPSGRFLSP Trigger: GGGTGAGAGAAAGCGTCCGCTTGGGTTCCAGAGCCACAGGCGACTGGCTTGCAGCCCTCGCAGGGGTCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 72 bp | GCTGCGCGGGGCTGTGGATCTGGATTCCATCTCGAGTaGACCCCAACCCGCACACCTGGGTCGTGGGAACTG | + |
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Preference number: 3 (lower is better) Translates to: AARGCGSGFHLE*TPTRTPGSWEL Trigger: CAGTTCCCACGACCCAGGTGTGCGGGTTGGGGTGCACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | CATTCCCAGAGGCGACCGGGTCAGCAGCCAGGCTCCTaGCTTTGTCTTTCGCTGCGCGGGGCTGTGGATCTG | + |
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Preference number: 3 (lower is better) Translates to: HSQRRPGQQPGS*LCLSLRGAVDL Trigger: CAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCTGCTGACCCGGTCGCCTCTGGGAATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | CCCCTGCGAGGGCTGCAAGCCAGTCGCCTGTGGCTCTaGAACCCAAGCGGACGCTTTCTCTCACCCCACGTT | + |
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Preference number: 3 (lower is better) Translates to: PLRGLQASRLWL*NPSGRFLSPHV Trigger: AACGTGGGGTGAGAGAAAGCGTCCGCTTGGGTTCCAGAGCCACAGGCGACTGGCTTGCAGCCCTCGCAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | GCAGTTCTCCGGGTGCAGAGCCTCCCTAACCCTGCATaGAGGCAGGCAGCCGGGCACTGCAATCCTCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: AVLRVQSLPNPA*RQAAGHCNPQC Trigger: GCACTGAGGATTGCAGTGCCCGGCTGCCTGCCTCCATGCAGGGTTAGGGAGGCTCTGCACCCGGAGAACTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 72 bp | TGCACCCCAACCCGCACACCTGGGTCGTGGGAACTGTaGTGTTCCTGTAAGCAGCCCCAGTCACGTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: CTPTRTPGSWEL*CSCKQPQSRAA Trigger: GGCAGCACGTGACTGGGGCTGCTTACAGGAACAGCACAGTTCCCACGACCCAGGTGTGCGGGTTGGGGTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 72 bp | CGGGTCAGCAGCCAGGCTCCTGGCTTTGTCTTTCGCTaGGCGGGGCTGTGGATCTGGATTCCATCTCGAGTG | + |
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Preference number: 3 (lower is better) Translates to: RVSSQAPGFVFR*AGLWIWIPSRV Trigger: CACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCTGCTGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | CCTGGCTTTGTCTTTCGCTGCGCGGGGCTGTGGATCTaGATTCCATCTCGAGTGCACCCCAACCCGCACACC | + |
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Preference number: 3 (lower is better) Translates to: PGFVFRCAGLWI*IPSRVHPNPHT Trigger: GGTGTGCGGGTTGGGGTGCACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | CAGGCTCCTGGCTTTGTCTTTCGCTGCGCGGGGCTGTaGATCTGGATTCCATCTCGAGTGCACCCCAACCCG | + |
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Preference number: 3 (lower is better) Translates to: QAPGFVFRCAGL*IWIPSRVHPNP Trigger: CGGGTTGGGGTGCACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR TCA 72 bp | TGCCTGGGCAGCCCCAATATCCCGACCTTTAACCTCTaGGCCCAGCCCCACCCACACGTGGTGAGAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: CLGSPNIPTFNL*AQPHPHVVRAE Trigger: TTCTGCTCTCACCACGTGTGGGTGGGGCTGGGCTCAGAGGTTAAAGGTCGGGATATTGGGGCTGCCCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | ACAGCCCAGTATCGGGGAGATGTTCACCTCCTTGCTTaGCTCATTCCCAGAGGCGACCGGGTCAGCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TAQYRGDVHLLA*LIPRGDRVSSQ Trigger: CTGGCTGCTGACCCGGTCGCCTCTGGGAATGAGCCAAGCAAGGAGGTGAACATCTCCCCGATACTGGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 72 bp | GGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTaGTCCGGAGCTCTGCGAAGGATCCCGACCGCGCCG | + |
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Preference number: 3 (lower is better) Translates to: GVFLNISGHAPL*SGALRRIPTAP Trigger: CGGCGCGGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR-3UTR CAA 90 bp | GAACTGTGCTGTTCCTGTAAGCAGCCCCAGTCACGTGCTGCCTGGGCAGCCCCATCGGCTCGGCTGAGCTaGTGTCCTACCACATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ELCCSCKQPQSRAAWAAPSARLS*CPTTFS Trigger: AGAAAATGTGGTAGGACACAAGCTCAGCCGAGCCGA...TGGGGCTGCCCAGGCAGCACGTGACTGGGGCTGCTTACAGGAACAGCACAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR TCA 72 bp | ACTGAGGGGAGGCGGGCTGGACCTAATAACTCTACCTaGGGCCTCCTCCAAGCTCCAGGCCCATTTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: TEGRRAGPNNST*GLLQAPGPFLT Trigger: TGTCAGAAATGGGCCTGGAGCTTGGAGGAGGCCTCAGGTAGAGTTATTAGGTCCAGCCCGCCTCCCCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 72 bp | CAAAACAGCCCAGTATCGGGGAGATGTTCACCTCCTTaGTTGGCTCATTCCCAGAGGCGACCGGGTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: QNSPVSGRCSPP*LAHSQRRPGQQ Trigger: CTGCTGACCCGGTCGCCTCTGGGAATGAGCCAAGCAAGGAGGTGAACATCTCCCCGATACTGGGCTGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 72 bp | CTCCCTAACCCTGCATGGAGGCAGGCAGCCGGGCACTaGAATCCTCAGTGCTCAATTCAGAAACAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LPNPAWRQAAGH*NPQCSIQKQLL Trigger: CAGCAGCTGTTTCTGAATTGAGCACTGAGGATTGCAGTGCCCGGCTGCCTGCCTCCATGCAGGGTTAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | TGCTGTTCCTGTAAGCAGCCCCAGTCACGTGCTGCCTaGGCAGCCCCAATATCCCGACCTTTAACCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: CCSCKQPQSRAA*AAPISRPLTSE Trigger: CTCAGAGGTTAAAGGTCGGGATATTGGGGCTGCCCAGGCAGCACGTGACTGGGGCTGCTTACAGGAACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR GCA 72 bp | GCATGGAGGCAGGCAGCCGGGCACTGCAATCCTCAGTaGTCAATTCAGAAACAGCTGCTGCAAGTTAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: AWRQAAGHCNPQ*SIQKQLLQVSQ Trigger: CTGGCTAACTTGCAGCAGCTGTTTCTGAATTGAGCACTGAGGATTGCAGTGCCCGGCTGCCTGCCTCCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR-3UTR CAA 90 bp | TCAACGACCAAAGCCCTAGTTGGTTCGGCTCGGCTGAGCTTGTGTCCTACCACAGCGAGTTGTTTGGTTTaGTGTAGAAAGCAGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: STTKALVGSARLSLCPTTASCLV*CRKQVL Trigger: GAGCACCTGCTTTCTACACAAAACCAAACAACTCGC...TGTGGTAGGACACAAGCTCAGCCGAGCCGAACCAACTAGGGCTTTGGTCGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| 3UTR GCA 72 bp | GGCACTGCAATCCTCAGTGCTCAATTCAGAAACAGCTaGTGCAAGTTAGCCAGTGATCCGACCTTTTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: GTAILSAQFRNS*CKLASDPTFLS Trigger: TGACAAAAAGGTCGGATCACTGGCTAACTTGCAGCAGCTGTTTCTGAATTGAGCACTGAGGATTGCAGTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
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| 3UTR CCA 72 bp | AATTTCTACAAAATGCAAGTCATTTCGATGCCCCCTTaGCTCAAAGAGACCGGTCCCTCAGGCACCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: NFYKMQVISMPP*LKETGPSGTRF Trigger: AAACCTGGTGCCTGAGGGACCGGTCTCTTTGAGCCAAGGGGGCATCGAAATGACTTGCATTTTGTAGAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| 3UTR TCA 72 bp | CGGAATGATATGGGCCATGTAAACGTTTACATTCTGTaGATTTCTACAAAATGCAAGTCATTTCGATGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RNDMGHVNVYIL*ISTKCKSFRCP Trigger: GGGGCATCGAAATGACTTGCATTTTGTAGAAATTCACAGAATGTAAACGTTTACATGGCCCATATCATTCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR CCA 90 bp | GGATCCCGACCGCGCCGGGCTATGCAGGCAGCTGCAGGCGACCAGGGGCGTCCCTTGGCCGCTCCGGTTTaGCGCTCCGCACCGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRPRRAMQAAAGDQGRPLAAPV*RSAPPS Trigger: GGACGGCGGTGCGGAGCGCCAAACCGGAGCGGCCAA...GGGACGCCCCTGGTCGCCTGCAGCTGCCTGCATAGCCCGGCGCGGTCGGGATCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | GGATCCCGACCGCGCCGGGCTATGCAGGCAGCTGCAGGCGACCAGGGGCGTCCCGGGGCCGTGCGGATCTaGGCAGAAGCAAGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRPRRAMQAAAGDQGRPGAVRI*AEASRS Trigger: GCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCC...GGGACGCCCCTGGTCGCCTGCAGCTGCCTGCATAGCCCGGCGCGGTCGGGATCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCGACCGCGCCGGGCTATGCAGGCAGCTGCAGGCGACCAGGGGCGTCCCGCTGCGCCGACGCGTGTaGCATGTTGGCTGCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPDRAGLCRQLQATRGVPLRRRV*HVGCLK Trigger: CTTGAGGCAGCCAACATGGCACACGCGTCGGCGCAG...CGGGACGCCCCTGGTCGCCTGCAGCTGCCTGCATAGCCCGGCGCGGTCGGGATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | GGATCCCGACCGCGCCGGGCTATGCAGGCAGCTGCAGGCGACCAGGGGCGTCCCGAAACACGAGCGGCATaGCCACGAGAGTCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRPRRAMQAAAGDQGRPETRAA*PRESAP Trigger: CGGCGCAGACTCTCGTGGGCATGCCGCTCGTGTTTC...GGGACGCCCCTGGTCGCCTGCAGCTGCCTGCATAGCCCGGCGCGGTCGGGATCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | ACCGCGCCGGGCTATGCAGGCAGCTGCAGGCGACCAGGGGCGTCCCGGGAGCCGTGCGCGTCTTCTTCTTaGCCGCTCCGGTTTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAPGYAGSCRRPGASREPCASSS*PLRFGA Trigger: AGCGCCAAACCGGAGCGGCCAAGAAGAAGACGCGCA...CGGCTCCCGGGACGCCCCTGGTCGCCTGCAGCTGCCTGCATAGCCCGGCGCGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | CAACTGTGTCACCAGCGGGAGACCCCTGCGAGGGCTGCAAGCCAGTCGCCTGTGGCCCTGCGCCTCCGCTaGCCTTGGGGGTACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLCHQRETPARAASQSPVALRLR*PWGYPG Trigger: GCCTGGGTACCCCCAAGGGCAGCGGAGGCGCAGGGC...CACAGGCGACTGGCTTGCAGCCCTCGCAGGGGTCTCCCGCTGGTGACACAGTTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCGCGCCGGGATGGACTGGATGGTaGAGCTGGAGACGCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGHAPLCSGALRRIPTAPGWTGW*SWRRHR Trigger: CCGGTGGCGTCTCCAGCTTCACCATCCAGTCCATCC...CGGCGCGGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCGCGCCGGGCTCCTTGGGGCCGTaGGGATCTGGGCAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGHAPLCSGALRRIPTAPGSLGP*GSGQKQ Trigger: TTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCC...CGGCGCGGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCGCGCCGCCGCCCAGGATGGACTaGATGGTGAAGCTGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SGHAPLCSGALRRIPTAPPPRMD*MVKLET Trigger: CGTCTCCAGCTTCACCATCCAGTCCATCCTGGGCGG...CGGCGCGGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCCCCACCCACACGTGGTGAGAGCAGAACCTTGGGGGCTGAGGGAGGAGGGGCCGTGCGGATCTaGGCAGAAGCAAGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAPPTRGESRTLGAEGGGAVRI*AEASRS Trigger: GCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCC...TCCTCCCTCAGCCCCCAAGGTTCTGCTCTCACCACGTGTGGGTGGGGCTGGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCCGGAGCTCTGCGAAGGATCCCGACCGCGCCGGGCTATGCAGGCAGCTGCAGGACACAGACAGGCTaGGTTTCCTGGCTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSGALRRIPTAPGYAGSCRTQTG*VSWLAT Trigger: GGTGGCCAGCCAGGAAACGCAGCCTGTCTGTGTCCT...GCAGCTGCCTGCATAGCCCGGCGCGGTCGGGATCCTTCGCAGAGCTCCGGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | AATATTTCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCGCCCTGCGCCTCCGCTaGCCTTGGGGGTACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NISGHAPLCSGALRRIPTALRLR*PWGYPG Trigger: GCCTGGGTACCCCCAAGGGCAGCGGAGGCGCAGGGC...GGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATATT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTGCGAGGGCTGCAAGCCAGTCGCCTGTGGCTCTGGAACCCAAGCGGACGCGGGATGGGGGTATGGTaGTTAGGGCTTGGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRGLQASRLWLWNPSGRGMGVW*LGLGSL Trigger: CAAGGAGCCAAGCCCTAAGCACCATACCCCCATCCC...GCGTCCGCTTGGGTTCCAGAGCCACAGGCGACTGGCTTGCAGCCCTCGCAGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCCAGCCCCACCCACACGTGGTGAGAGCAGAACCTTGGGGGCTGAGGGAGAAACACGAGCGGCATaGCCACGAGAGTCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSPAPPTRGESRTLGAEGETRAA*PRESAP Trigger: CGGCGCAGACTCTCGTGGGCATGCCGCTCGTGTTTC...TCCCTCAGCCCCCAAGGTTCTGCTCTCACCACGTGTGGGTGGGGCTGGGCTCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| 3UTR CAA 72 bp | CCAGAGGCGACCGGGTCAGCAGCCAGGCTCCTGGCTTaGTCTTTCGCTGCGCGGGGCTGTGGATCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PEATGSAARLLA*SFAARGCGSGF Trigger: GAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAGGAGCCTGGCTGCTGACCCGGTCGCCTCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR GCA 90 bp | TATTTCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCGCTGGGTCTCGGTGAGCTaGAGGCTGGAGGCGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFWTRAALLRSSAKDPDRWVSVS*RLEARQ Trigger: TTGCCTCGCCTCCAGCCTGCAGCTCACCGAGACCCA...GCGGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCCCCACCCACACGTGGTGAGAGCAGAACCTTGGGGGCTGAGGGAGGACCGCCCAGGATGGACTaGATGGTGAAGCTGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPPTRGESRTLGAEGGPPRMD*MVKLET Trigger: CGTCTCCAGCTTCACCATCCAGTCCATCCTGGGCGG...TCCTCCCTCAGCCCCCAAGGTTCTGCTCTCACCACGTGTGGGTGGGGCTGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGTGTCACCAGCGGGAGACCCCTGCGAGGGCTGCAAGCCAGTCGCCTGTGAGAAGGAGAAAGGAATaGCGTGCGCTCCGAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLCHQRETPARAASQSPVRRRKE*RALRGR Trigger: GCGGCCTCGGAGCGCACGCCATTCCTTTCTCCTTCT...CACAGGCGACTGGCTTGCAGCCCTCGCAGGGGTCTCCCGCTGGTGACACAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR GCA 90 bp | CTGCGCGGGGCTGTGGATCTGGATTCCATCTCGAGTGCACCCCAACCCGCACACAGGACACAGACAGGCTaGGTTTCCTGGCTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LRGAVDLDSISSAPQPAHRTQTG*VSWLAT Trigger: GGTGGCCAGCCAGGAAACGCAGCCTGTCTGTGTCCT...GTGTGCGGGTTGGGGTGCACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR GCA 90 bp | AATATTTCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCGCTGGTACACTTGGCTaGGGGAGAAGACGGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NISGHAPLCSGALRRIPTAGTLG*GRRRCA Trigger: CGCGCACCGTCTTCTCCCGCAGCCAAGTGTACCAGC...GGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTTGTCTTTCGCTGCGCGGGGCTGTGGATCTGGATTCCATCTCGAGTGCTGGGTCTCGGTGAGCTaGAGGCTGGAGGCGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LALSFAARGCGSGFHLECWVSVS*RLEARQ Trigger: TTGCCTCGCCTCCAGCCTGCAGCTCACCGAGACCCA...GCACTCGAGATGGAATCCAGATCCACAGCCCCGCGCAGCGAAAGACAAAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR CCA 90 bp | AATATTTCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCAGAAGGAGAAAGGAATaGCGTGCGCTCCGAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NISGHAPLCSGALRRIPTRRRKE*RALRGR Trigger: GCGGCCTCGGAGCGCACGCCATTCCTTTCTCCTTCT...GGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| 3UTR CAA 72 bp | ATAGATAGGGCCTTGGCGCTGCAGACTCCTAGCTCTTaGCACCCTGATCAACCACTGAGGGGAGGCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDRALALQTPSS*HPDQPLRGGGL Trigger: CAGCCCGCCTCCCCTCAGTGGTTGATCAGGGTGCAAAGAGCTAGGAGTCTGCAGCGCCAAGGCCCTATCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTTCGGCTCGGCTGAGCTTGTGTCCTACCACATTTTCTATATACAGGTGCGCCTCCGCTGCCCTTaGGGGTACCCAGGCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWFGSAELVSYHIFYIQVRLRCP*GYPGKG Trigger: TCCCTTGCCTGGGTACCCCCAAGGGCAGCGGAGGCG...CACCTGTATATAGAAAATGTGGTAGGACACAAGCTCAGCCGAGCCGAACCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGCCCTAGTTGGTTCGGCTCGGCTGAGCTTGTGTCCTACCACATTTTCTATGGATGGACTGGATGGTaGAGCTGGAGACGCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSPSWFGSAELVSYHIFYGWTGW*SWRRHR Trigger: CCGGTGGCGTCTCCAGCTTCACCATCCAGTCCATCC...ATAGAAAATGTGGTAGGACACAAGCTCAGCCGAGCCGAACCAACTAGGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTGCTCCGGGCTCCTTGGGGCCGTaGGGATCTGGGCAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIHMVYFLIFLDTRRSAPGSLGP*GSGQKQ Trigger: TTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCC...CGGAGCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGTTCGGCTCGGCTGAGCTTGTGTCCTACCACATTTTCTATATACAGGTGATGCCCACGAGAGTCTaGGCCGACGCGTGTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SWFGSAELVSYHIFYIQVMPTRV*ADACAM Trigger: CATGGCACACGCGTCGGCGCAGACTCTCGTGGGCAT...CACCTGTATATAGAAAATGTGGTAGGACACAAGCTCAGCCGAGCCGAACCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | ATAACGAATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTGCTTGGCCGCTCCGGTTTaGCGCTCCGCACCGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITNTHGVFLNISGHAPLCLAAPV*RSAPPS Trigger: GGACGGCGGTGCGGAGCGCCAAACCGGAGCGGCCAA...GCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATTCGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | AAACTCCTCTGCCGCTGTCTCCTGGGACAATCCATCCCTCCAAAGTTAGCAACCGTAAGGCCGAGAGATTaGTGCTCGGGTAATAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLLCRCLLGQSIPPKLATVRPRD*CSGNKA Trigger: CGCTTTATTACCCGAGCAGCAATCTCTCGGCCTTAC...GGTTGCTAACTTTGGAGGGATGGATTGTCCCAGGAGACAGCGGCAGAGGAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS-3UTR GCA 90 bp | ATAACGAATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTGCGCTGGTACACTTGGCTaGGGGAGAAGACGGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ITNTHGVFLNISGHAPLCAGTLG*GRRRCA Trigger: CGCGCACCGTCTTCTCCCGCAGCCAAGTGTACCAGC...GCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATTCGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | ATAACGAATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTGCCTGCGCCGACGCGTGTaGCATGTTGGCTGCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITNTHGVFLNISGHAPLCLRRRV*HVGCLK Trigger: CTTGAGGCAGCCAACATGGCACACGCGTCGGCGCAG...GCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATTCGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTGCTCCGAAAGGGATGGGGGTATaGTGCTTAGGGCTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIHMVYFLIFLDTRRSAPKGMGV*CLGLGS Trigger: GGAGCCAAGCCCTAAGCACCATACCCCCATCCCTTT...CGGAGCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | TCTATATACAGGTGTATATATGGGAGAAAGACTGCCTGGTTCTGTTGGTGGTTTATGCCCACGAGAGTCTaGGCCGACGCGTGTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SIYRCIYGRKTAWFCWWFMPTRV*ADACAM Trigger: CATGGCACACGCGTCGGCGCAGACTCTCGTGGGCAT...AAACCACCAACAGAACCAGGCAGTCTTTCTCCCATATATACACCTGTATATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGCCCTAGTTGGTTCGGCTCGGCTGAGCTTGTGTCCTACCACATTTTCTATGTAAGGCCGAGAGATTaGTGCTCGGGTAATAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSPSWFGSAELVSYHIFYVRPRD*CSGNKA Trigger: CGCTTTATTACCCGAGCAGCAATCTCTCGGCCTTAC...ATAGAAAATGTGGTAGGACACAAGCTCAGCCGAGCCGAACCAACTAGGGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CCA 90 bp | ATAACGAATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTGCTGCGCGTCTTCTTCTTaGCCGCTCCGGTTTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITNTHGVFLNISGHAPLCCASSS*PLRFGA Trigger: AGCGCCAAACCGGAGCGGCCAAGAAGAAGACGCGCA...GCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATTCGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| 3UTR CAA 72 bp | GAATTTCTACAAAATGCAAGTCATTTCGATGCCCCCTaGGCTCAAAGAGACCGGTCCCTCAGGCACCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EFLQNASHFDAP*AQRDRSLRHQV Trigger: AACCTGGTGCCTGAGGGACCGGTCTCTTTGAGCCAAGGGGGCATCGAAATGACTTGCATTTTGTAGAAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| 3UTR CAA 72 bp | TGCTATGAAAACGTAGAGAAAATACAGTGCTGTGATTaGCATGATCCTGACGAAGCAGTTCTCCGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYENVEKIQCCD*HDPDEAVLRVQ Trigger: CTGCACCCGGAGAACTGCTTCGTCAGGATCATGCAAATCACAGCACTGTATTTTCTCTACGTTTTCATAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| 3UTR CAA 72 bp | TGTAAGCAAACCAACCTAGTATTGCCCGGTGCATTCTaGTGTAGCATCCATCTAATGTCACCTAGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CKQTNLVLPGAF*CSIHLMSPRRS Trigger: ACTCCTCCTAGGTGACATTAGATGGATGCTACACAAGAATGCACCGGGCAATACTAGGTTGGTTTGCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| 3UTR CAA 72 bp | AACAGCTGCTGCAAGTTAGCCAGTGATCCGACCTTTTaGTCATTCACGGGCAAATTTAACAACTACAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSCCKLASDPTF*SFTGKFNNYKK Trigger: CTTTTTGTAGTTGTTAAATTTGCCCGTGAATGACAAAAAGGTCGGATCACTGGCTAACTTGCAGCAGCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS CCA 90 bp | GCGGGCTCCCGCGGTGCCTCGGAGGGGCCCCCGCCCAGGATGGACTaGATGGTGAAGCTGGAGACGCCACCGGCCGCCGGACATCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGSRGASEGPPPRMD*MVKLETPPAAGHPF Trigger: GAAGGGATGTCCGGCGGCCGGTGGCGTCTCCAGCTTCACCATCCAGTCCATCCTGGGCGGGGGCCCCTCCGAGGCACCGCGGGAGCCCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS CCA 90 bp | CTTCTTCTTGGCCGCTCCGGTTTGGCGCTCCGCACCGCCGTCCCGTaGCCGCTCCGGGCCCGGAGAAGGCGAGCCCGCCGGCAAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLGRSGLALRTAVP*PLRARRRRARRQKP Trigger: AGGCTTTTGCCGGCGGGCTCGCCTTCTCCGGGCCCGGAGCGGCCACGGGACGGCGGTGCGGAGCGCCAAACCGGAGCGGCCAAGAAGAAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS GCA 90 bp | AGACAGGCTGCGTTTCCTGGCTGGCCACCCGGCGGGCTCCCGCGGTaGCTCGGAGGGGCCCCCGCCCAGGATGGACTGGATGGTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQAAFPGWPPGGLPR*LGGAPAQDGLDGEA Trigger: AGCTTCACCATCCAGTCCATCCTGGGCGGGGGCCCCTCCGAGGCACCGCGGGAGCCCGCCGGGTGGCCAGCCAGGAAACGCAGCCTGTCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGCGGGAGACCCCTGCGAGGGCTGCAAGCCAGTCGCCTGTGGCTCTGGAAGCGCCTCCGCTGCCCTaGGGGGTACCCAGGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQRETPARAASQSPVALEAPPLP*GVPRQG Trigger: CCCTTGCCTGGGTACCCCCAAGGGCAGCGGAGGCGC...TTCCAGAGCCACAGGCGACTGGCTTGCAGCCCTCGCAGGGGTCTCCCGCTGGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051997.9 |
||
| CDS GCA 90 bp | GCACCGGCACTCGCAGCAGCGAACTGTCCCGAAACACGAGCGGCATaGCCACGAGAGTCTGCGCCGACGCGTGTGCCATGTTGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: APALAAANCPETRAA*PRESAPTRVPCWLP Trigger: AGGCAGCCAACATGGCACACGCGTCGGCGCAGACTCTCGTGGGCATGCCGCTCGTGTTTCGGGACAGTTCGCTGCTGCGAGTGCCGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CCA 90 bp | GGGGGTATGGTGCTTAGGGCTTGGCTCCTTGGGGCCGTGCGGATCTaGGCAGAAGCAAGCCGGAGCCTTCCAACCTTCCTCCGGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GGMVLRAWLLGAVRI*AEASRSLPTFLRLL Trigger: GAGGAGCCGGAGGAAGGTTGGAAGGCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCACCATACCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 90 bp | AGCAGCGAACTGTCCCGAAACACGAGCGGCATGCCCACGAGAGTCTaGGCCGACGCGTGTGCCATGTTGGCTGCCTCAAGCTCGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSELSRNTSGMPTRV*ADACAMLAASSSAE Trigger: CTCAGCCGAGCTTGAGGCAGCCAACATGGCACACGCGTCGGCGCAGACTCTCGTGGGCATGCCGCTCGTGTTTCGGGACAGTTCGCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CCA 90 bp | GGTACCCAGGCAAGGGAAAGGGATGGGGGTATGGTGCTTAGGGCTTaGCTCCTTGGGGCCGTGCGGATCTGGGCAGAAGCAAGCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GTQARERDGGMVLRA*LLGAVRIWAEASRS Trigger: GCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCACCATACCCCCATCCCTTTCCCTTGCCTGGGTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS-3UTR CAA 90 bp | AATATTTCTGGACACGCGCCGCTCTGCTCCGGAGCTCTGCGAAGGATCCCGACCGTGCGCGTCTTCTTCTaGGCCGCTCCGGTTTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: NISGHAPLCSGALRRIPTVRVFF*AAPVWR Trigger: GCGCCAAACCGGAGCGGCCAAGAAGAAGACGCGCAC...GGTCGGGATCCTTCGCAGAGCTCCGGAGCAGAGCGGCGCGTGTCCAGAAATATT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS TCA 90 bp | GAGCCCGCCGGCAAAAGCCTCTCCTTCTCTTCCTTAAAGTCCGGGTaGGAAGGAGAAAGGAATGGCGTGCGCTCCGAGGCCGCAGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: EPAGKSLSFSSLKSG*EGERNGVRSEAAGP Trigger: AGGGCCTGCGGCCTCGGAGCGCACGCCATTCCTTTCTCCTTCTCACCCGGACTTTAAGGAAGAGAAGGAGAGGCTTTTGCCGGCGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 90 bp | AAAGGGATGGGGGTATGGTGCTTAGGGCTTGGCTCCTTGGGGCCGTaGGGATCTGGGCAGAAGCAAGCCGGAGCCTTCCAACCTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KGMGVWCLGLGSLGP*GSGQKQAGAFQPSS Trigger: GGAGGAAGGTTGGAAGGCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCACCATACCCCCATCCCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 90 bp | CAAGCTTGTTGTACAGGTTGTAGAGCGGTAAGGCCGAGAGATTGCTaGTCGGGTAATAAAGCGGAGCCGGGAAGGCCAGAGAGCGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: QACCTGCRAVRPRDC*SGNKAEPGRPESAA Trigger: TGCCGCGCTCTCTGGCCTTCCCGGCTCCGCTTTATTACCCGAGCAGCAATCTCTCGGCCTTACCGCTCTACAACCTGTACAACAAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 90 bp | AGTCAAGCTTGTTGTACAGGTTGTAGAGCGGTAAGGCCGAGAGATTaGTGCTCGGGTAATAAAGCGGAGCCGGGAAGGCCAGAGAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: SQACCTGCRAVRPRD*CSGNKAEPGRPESA Trigger: CGCGCTCTCTGGCCTTCCCGGCTCCGCTTTATTACCCGAGCAGCAATCTCTCGGCCTTACCGCTCTACAACCTGTACAACAAGCTTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS-3UTR CAA 90 bp | CGAATACACATGGTGTATTTCTTAATATTTCTGGACACGCGCCGCTCTGCTCCGGTGCGCGTCTTCTTCTaGGCCGCTCCGGTTTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RIHMVYFLIFLDTRRSAPVRVFF*AAPVWR Trigger: GCGCCAAACCGGAGCGGCCAAGAAGAAGACGCGCAC...CGGAGCAGAGCGGCGCGTGTCCAGAAATATTAAGAAATACACCATGTGTATTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS-3UTR CAA 90 bp | TTCTATATACAGGTGTATATATGGGAGAAAGACTGCCTGGTTCTGTTGGTGGTTGCGCCTCCGCTGCCCTaGGGGGTACCCAGGCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: FYIQVYIWEKDCLVLLVVAPPLP*GVPRQG Trigger: CCCTTGCCTGGGTACCCCCAAGGGCAGCGGAGGCGC...AACCACCAACAGAACCAGGCAGTCTTTCTCCCATATATACACCTGTATATAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CCA 72 bp | CGCGGTGCCTCGGAGGGGCCCCCGCCCAGGATGGACTaGATGGTGAAGCTGGAGACGCCACCGGCCGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: RGASEGPPPRMD*MVKLETPPAAG Trigger: TCCGGCGGCCGGTGGCGTCTCCAGCTTCACCATCCAGTCCATCCTGGGCGGGGGCCCCTCCGAGGCACCGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CCA 72 bp | CTCCTCCGAGGACACAGACAGGCTGCGTTTCCTGGCTaGCCACCCGGCGGGCTCCCGCGGTGCCTCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LLRGHRQAAFPG*PPGGLPRCLGG Trigger: CCCTCCGAGGCACCGCGGGAGCCCGCCGGGTGGCCAGCCAGGAAACGCAGCCTGTCTGTGTCCTCGGAGGAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS TCA 72 bp | CCTCGGAGGGGCCCCCGCCCAGGATGGACTGGATGGTaGAGCTGGAGACGCCACCGGCCGCCGGACATCCCT | + |
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Preference number: 6 (lower is better) Translates to: PRRGPRPGWTGW*SWRRHRPPDIP Trigger: AGGGATGTCCGGCGGCCGGTGGCGTCTCCAGCTTCACCATCCAGTCCATCCTGGGCGGGGGCCCCTCCGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 72 bp | CTGTCCCGAAACACGAGCGGCATGCCCACGAGAGTCTaGGCCGACGCGTGTGCCATGTTGGCTGCCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LSRNTSGMPTRV*ADACAMLAASS Trigger: GCTTGAGGCAGCCAACATGGCACACGCGTCGGCGCAGACTCTCGTGGGCATGCCGCTCGTGTTTCGGGACAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 72 bp | CTCGCAGCAGCGAACTGTCCCGAAACACGAGCGGCATaGCCACGAGAGTCTGCGCCGACGCGTGTGCCATGT | + |
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Preference number: 6 (lower is better) Translates to: LAAANCPETRAA*PRESAPTRVPC Trigger: ACATGGCACACGCGTCGGCGCAGACTCTCGTGGGCATGCCGCTCGTGTTTCGGGACAGTTCGCTGCTGCGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 72 bp | GGGGTATGGTGCTTAGGGCTTGGCTCCTTGGGGCCGTaGGGATCTGGGCAGAAGCAAGCCGGAGCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: GVWCLGLGSLGP*GSGQKQAGAFQ Trigger: TTGGAAGGCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCACCATACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CCA 72 bp | GTGCTTAGGGCTTGGCTCCTTGGGGCCGTGCGGATCTaGGCAGAAGCAAGCCGGAGCCTTCCAACCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VLRAWLLGAVRI*AEASRSLPTFL Trigger: GAGGAAGGTTGGAAGGCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CCA 72 bp | CTCTTCCTTAAAGTCCGGGTGAGAAGGAGAAAGGAATaGCGTGCGCTCCGAGGCCGCAGGCCCTGCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFLKVRVRRRKE*RALRGRRPCAS Trigger: GGAGGCGCAGGGCCTGCGGCCTCGGAGCGCACGCCATTCCTTTCTCCTTCTCACCCGGACTTTAAGGAAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CAA 90 bp | AGGCAAGGGAAAGGGATGGGGGTATGGTGCTTAGGGCTTGGCTCCTaGGGGCCGTGCGGATCTGGGCAGAAGCAAGCCGGAGCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: RQGKGMGVWCLGLGS*GPCGSGQKQAGAFQ Trigger: TTGGAAGGCTCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCACCATACCCCCATCCCTTTCCCTTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CCA 72 bp | GCAAGGGAAAGGGATGGGGGTATGGTGCTTAGGGCTTaGCTCCTTGGGGCCGTGCGGATCTGGGCAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: ARERDGGMVLRA*LLGAVRIWAEA Trigger: TGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCACCATACCCCCATCCCTTTCCCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS CAA 72 bp | AAAGGGATGGGGGTATGGTGCTTAGGGCTTGGCTCCTaGGGGCCGTGCGGATCTGGGCAGAAGCAAGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: KGMGVWCLGLGS*GPCGSGQKQAG Trigger: TCCGGCTTGCTTCTGCCCAGATCCGCACGGCCCCAAGGAGCCAAGCCCTAAGCACCATACCCCCATCCCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 72 bp | TGTACAGGTTGTAGAGCGGTAAGGCCGAGAGATTGCTaGTCGGGTAATAAAGCGGAGCCGGGAAGGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CTGCRAVRPRDC*SGNKAEPGRPE Trigger: CTCTGGCCTTCCCGGCTCCGCTTTATTACCCGAGCAGCAATCTCTCGGCCTTACCGCTCTACAACCTGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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| CDS GCA 72 bp | TGTTGTACAGGTTGTAGAGCGGTAAGGCCGAGAGATTaGTGCTCGGGTAATAAAGCGGAGCCGGGAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CCTGCRAVRPRD*CSGNKAEPGRP Trigger: TGGCCTTCCCGGCTCCGCTTTATTACCCGAGCAGCAATCTCTCGGCCTTACCGCTCTACAACCTGTACAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051997.9 ENSMUST00000183219.8 |
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