Pregenerated sensors for HMOX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005413Ensembl transcript IDs: ENSMUST00000005548.8
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTaGCTGGATGTGCTTTTGGTGAGGGAACTGTGTCAGGTATCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LCCRIWGCWFQSSGH*LDVLLVRELCQVSP Trigger: GGGAGATACCTGACACAGTTCCCTCACCAAAAGCACATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR TCA 90 bp | GCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATGTGCTTTTGGTaGGGGAACTGTGTCAGGTATCTCCCTCCATTCCAGAGAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: AAGFKVQATGWMCFW*GNCVRYLPPFQRER Trigger: CCTTTCTCTCTGGAATGGAGGGAGATACCTGACACAGTTCCCTCACCAAAAGCACATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR CCA 90 bp | GTCAGGTATCTCCCTCCATTCCAGAGAGAAAGGAAACACAGGGAGTaGGCTAGGGACCCCAAAAGCTTTCTTAGAGGCCCAAGAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VRYLPPFQRERKHRE*ARDPKSFLRGPREE Trigger: CTCTTCTCTTGGGCCTCTAAGAAAGCTTTTGGGGTCCCTAGCCCACTCCCTGTGTTTCCTTTCTCTCTGGAATGGAGGGAGATACCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR CCA 90 bp | CGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGCACTaGGGGACAGCAGTCGTGGTCAGTCAACATGGATGCTTACAACCA | + |
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Preference number: 1 (lower is better) Translates to: RDRNVWKRISKWPWH*GTAVVVSQHGCLQP Trigger: TGGTTGTAAGCATCCATGTTGACTGACCACGACTGCTGTCCCCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR CAA 90 bp | TGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATGTGCTTTaGGTGAGGGAACTGTGTCAGGTATCTCCCTCCATTCCAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: WGCWFQSSGHWLDVL*VRELCQVSPSIPER Trigger: TCTCTCTGGAATGGAGGGAGATACCTGACACAGTTCCCTCACCAAAAGCACATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAAAGGAAACACAGGGAGTGGGCTAGGGACCCCAAAAGCTTTCTTAGAGGAGAGAAGGCCACATTaGACAGAGTTCACAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: REKGNTGSGLGTPKAFLEERRPH*TEFTAP Trigger: AGGGGCTGTGAACTCTGTCCAATGTGGCCTTCTCTC...CTCTAAGAAAGCTTTTGGGGTCCCTAGCCCACTCCCTGTGTTTCCTTTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR-3UTR GCA 90 bp | AAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGCACTGGGGTCAGTCAACATGGATaGTTACAACCATGGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: KYETEMSGNGYQSGHGTGVSQHG*LQPWAL Trigger: CAGTGCCCATGGTTGTAAGCATCCATGTTGACTGAC...CCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR CCA 72 bp | AGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTaGCTGGATGTGCTTTTGGTGAGGGAACTGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: RIWGCWFQSSGH*LDVLLVRELCQ Trigger: CTGACACAGTTCCCTCACCAAAAGCACATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR CCA 72 bp | AATGTCTGGAAACGGATATCAAAGTGGCCATGGCACTaGGGGACAGCAGTCGTGGTCAGTCAACATGGATGC | + |
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Preference number: 3 (lower is better) Translates to: NVWKRISKWPWH*GTAVVVSQHGC Trigger: GCATCCATGTTGACTGACCACGACTGCTGTCCCCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGGTGAGGGAACTGTGTCAGGTATCTCCCTCCATTCCAGAGAGAAAGGAAACAGAGAGAAGGCCACATaGGACAGAGTTCACAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FGEGTVSGISLHSREKGNREKAT*DRVHSP Trigger: GGGGCTGTGAACTCTGTCCAATGTGGCCTTCTCTCT...GTTTCCTTTCTCTCTGGAATGGAGGGAGATACCTGACACAGTTCCCTCACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR CCA 72 bp | ATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTaGCCATGGCACTGGGGGACAGCAGTCGTGGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: IRDRNVWKRISK*PWHWGTAVVVS Trigger: ACTGACCACGACTGCTGTCCCCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR-3UTR CAA 90 bp | AAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGCACTGGGGCTCTGCTGCAGGATTaGGGGCTGCTGGTTTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: KYETEMSGNGYQSGHGTGALLQD*GLLVSK Trigger: CTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAGC...CCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR GCA 90 bp | GGCTCTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGGCAGCTCAGGGTGAGTaGGCCCCACCTCGTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: GSAAGFGAAGFKVQATGWAAQGE*APPRGD Trigger: GTCTCCACGAGGTGGGGCGCACTCACCCTGAGCTGC...CCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATCAGAAGGCCATGTCCTaGTCCAGGGCAGCCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LCCRIWGCWFQSSGHWLDQKAMS*SRAALR Trigger: CCGAAGGGCTGCCCTGGAGCAGGACATGGCCTTCTG...ATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATCCCTCGGGGTGTCTCTaGAGGGGCAGTATCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LCCRIWGCWFQSSGHWLDPSGCL*RGSILH Trigger: GTGCAAGATACTGCCCCTGCAGAGACACCCCGAGGG...ATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | CTCTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATGAGTGGGGCATAGACTaGGTTCTGCTTGTTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LCCRIWGCWFQSSGHWLDEWGID*VLLVAL Trigger: GAGCGCAACAAGCAGAACCCAGTCTATGCCCCACTC...ATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGAAAGGAAACACAGGGAGTGGGCTAGGGACCCCAAAAGCTTTCTTAGAGCTGGCGTGCAAGGGATaGTTTCCTGCCAGTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: REKGNTGSGLGTPKAFLELACKG*FPASEA Trigger: GGCCTCACTGGCAGGAAATCATCCCTTGCACGCCAG...CTCTAAGAAAGCTTTTGGGGTCCCTAGCCCACTCCCTGTGTTTCCTTTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR TCA 90 bp | AAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGCACTGGGCAGGACCTGACCCCCTaGGAGGTCACCCAGGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: KYETEMSGNGYQSGHGTGQDLTP*EVTQVA Trigger: CGCTACCTGGGTGACCTCTCAGGGGGTCAGGTCCTG...CCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR TCA 90 bp | CTCTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATCACGATAGAGCTGTTTaGACTTGGTGGGGCTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: LCCRIWGCWFQSSGHWLDHDRAV*TWWGCR Trigger: TCGACAGCCCCACCAAGTTCAAACAGCTCTATCGTG...ATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATGTCTCAGGGAAGTAGAGTaGGGCATAGACTGGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLQDLGLLVSKFRPLAGCLREVE*GIDWVL Trigger: CAGAACCCAGTCTATGCCCCACTCTACTTCCCTGAG...ACATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR TCA 90 bp | ACAAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATACCAGCAGCTCAGGGTaGGTGCGCCCCACCTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: TRQKYETEMSGNGYQSGHTSSSG*VRPTSW Trigger: CCACGAGGTGGGGCGCACTCACCCTGAGCTGCTGGT...ATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | AAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGGGCCCTCCCCAGAGCTaGGCAAGGCCATGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KTEIRDRNVWKRISKWPWGPPQS*ARPWPS Trigger: AGAAGGCCATGGCCTTGCCCAGCTCTGGGGAGGGCC...CCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGATGTATCTGTGAGGGACTCTaGTCTTTGTGTTCCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLQDLGLLVSKFRPLAGCICEGL*SLCSSV Trigger: GACAGAGGAACACAAAGACCAGAGTCCCTCACAGAT...ACATCCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAAGGAAACACAGGGAGTGGGCTAGGGACCCCAAAAGCTTTCTTAGAGTGGAGGAGCGGTGTCTaGGATGAGCTAGTGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: REKGNTGSGLGTPKAFLEWRSGV*DELVLI Trigger: GATCAGCACTAGCTCATCCCAGACACCGCTCCTCCA...CTCTAAGAAAGCTTTTGGGGTCCCTAGCCCACTCCCTGTGTTTCCTTTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR TCA 90 bp | AAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGCACTGGGATCTTCTTCAGGACCTaGCCCCCTGAGAGGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: KYETEMSGNGYQSGHGTGIFFRT*PPERSP Trigger: GGGTGACCTCTCAGGGGGTCAGGTCCTGAAGAAGAT...CCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | AAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGCACTGGGGCCTCAGACAAATCCTaGGGCATGCTGTCGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KYETEMSGNGYQSGHGTGASDKS*GMLSGC Trigger: ACAGCCCGACAGCATGCCCCAGGATTTGTCTGAGGC...CCCAGTGCCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | TTTGGTGAGGGAACTGTGTCAGGTATCTCCCTCCATTCCAGAGAGAAAGGAAACTGTGTACCTCCTTGGTaGCCTCCTTCAAGGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FGEGTVSGISLHSREKGNCVPPW*PPSRPQ Trigger: CTGAGGCCTTGAAGGAGGCCACCAAGGAGGTACACA...GTTTCCTTTCTCTCTGGAATGGAGGGAGATACCTGACACAGTTCCCTCACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| 3UTR CAA 72 bp | TGGTTTCAAAGTTCAGGCCACTGGCTGGATGTGCTTTaGGTGAGGGAACTGTGTCAGGTATCTCCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: WFQSSGHWLDVL*VRELCQVSPSI Trigger: AATGGAGGGAGATACCTGACACAGTTCCCTCACCAAAAGCACATCCAGCCAGTGGCCTGAACTTTGAAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR GCA 90 bp | TTTGGTGAGGGAACTGTGTCAGGTATCTCCCTCCATTCCAGAGAGAAAGGAAACTCTTCTGTCACCCTGTaGTTGACCTCAGGTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: FGEGTVSGISLHSREKGNSSVTL*LTSGVI Trigger: GATGACACCTGAGGTCAAGCACAGGGTGACAGAAGA...GTTTCCTTTCTCTCTGGAATGGAGGGAGATACCTGACACAGTTCCCTCACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR TCA 90 bp | AAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGATGATTTCCTGCCAGTaGGGCCCATACCAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KTEIRDRNVWKRISKWPWMISCQ*GPYQKA Trigger: GGCCTTCTGGTATGGGCCTCACTGGCAGGAAATCAT...CCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR GCA 90 bp | AAAGCTTTCTTAGAGGCCCAAGAGAAGAGAGCCAGGCAAGATTCTCCCTTACAGGGCATAAATTCCCACTaGCACTGTTGCCAACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KAFLEAQEKRARQDSPLQGINSH*HCCQQE Trigger: TTCCTGTTGGCAACAGTGGCAGTGGGAATTTATGCC...CTGTAAGGGAGAATCTTGCCTGGCTCTCTTCTCTTGGGCCTCTAAGAAAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR GCA 90 bp | AAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGGGCCATGGCCTTCTGTaGAATCTTCTTCAGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: KTEIRDRNVWKRISKWPWGHGLL*NLLQDL Trigger: CAGGTCCTGAAGAAGATTGCACAGAAGGCCATGGCC...CCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | ACAAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGATGTGTACCTCCTTaGTGGCCTCCTTCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TRQKYETEMSGNGYQSGHGCVPP*WPPSRP Trigger: AGGCCTTGAAGGAGGCCACCAAGGAGGTACACATCC...ATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CCA 90 bp | AAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGTCAGCATTCTCGGCTTaGATGTGTACCTCCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KTEIRDRNVWKRISKWPWSAFSA*MCTSLV Trigger: CACCAAGGAGGTACACATCCAAGCCGAGAATGCTGA...CCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CCA 90 bp | CCCACTGCCACTGTTGCCAACAGGAAGCTGAGAGTGAGGACCCACTaGAGGAGCGGTGTCTGGGATGAGCTAGTGCTGATCTGGGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PTATVANRKLRVRTH*RSGVWDELVLIWGF Trigger: GAAACCCCAGATCAGCACTAGCTCATCCCAGACACCGCTCCTCCAGTGGGTCCTCACTCTCAGCTTCCTGTTGGCAACAGTGGCAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS TCA 90 bp | GGTGTCTCTGCAGGGGCAGTATCTTGCACCAGGCTAGCAGGCCTCTaGCGAAGTGACGCCATCTGTGAGGGACTCTGGTCTTTGTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: GVSAGAVSCTRLAGL*RSDAICEGLWSLCS Trigger: GGAACACAAAGACCAGAGTCCCTCACAGATGGCGTCACTTCGTCAGAGGCCTGCTAGCCTGGTGCAAGATACTGCCCCTGCAGAGACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CCA 90 bp | AGTGCGCCCCACCTCGTGGAGACGCTTTACATAGTGCTGTGTGGCTaGCGTGCAAGGGATGATTTCCTGCCAGTGAGGCCCATACCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SAPHLVETLYIVLCG*RARDDFLPVRPIPE Trigger: TTCTGGTATGGGCCTCACTGGCAGGAAATCATCCCTTGCACGCCAGCCACACAGCACTATGTAAAGCGTCTCCACGAGGTGGGGCGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS TCA 90 bp | CGTGGAGACGCTTTACATAGTGCTGTGTGGCTGGCGTGCAAGGGATaGTTTCCTGCCAGTGAGGCCCATACCAGAAGGCCATGTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RGDALHSAVWLACKG*FPASEAHTRRPCPA Trigger: AGCAGGACATGGCCTTCTGGTATGGGCCTCACTGGCAGGAAATCATCCCTTGCACGCCAGCCACACAGCACTATGTAAAGCGTCTCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTGCTGCAGGATTTGGGGCTGCTGGTTTCAAAGTTCAGGCCACTGGCTGGCTCAGCATTCTCGGCTaGGATGTGTACCTCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: GSAAGFGAAGFKVQATGWLSILG*DVYLLG Trigger: ACCAAGGAGGTACACATCCAAGCCGAGAATGCTGAG...CCAGCCAGTGGCCTGAACTTTGAAACCAGCAGCCCCAAATCCTGCAGCAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS GCA 90 bp | TCAATGTTGAGCAGGAAGGCGGTCTTAGCCTCTTCTGTCACCCTGTaGTTGACCTCAGGTGTCATCTCCAGAGTGTTCATTCGAGCACGA | + |
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Preference number: 5 (lower is better) Translates to: SMLSRKAVLASSVTL*LTSGVISRVFIRAR Trigger: TCGTGCTCGAATGAACACTCTGGAGATGACACCTGAGGTCAAGCACAGGGTGACAGAAGAGGCTAAGACCGCCTTCCTGCTCAACATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS GCA 90 bp | ATCTGTGAGGGACTCTGGTCTTTGTGTTCCTCTGTCAGCATCACCTaGAGCTCCTCAAACAGCTCAATGTTGAGCAGGAAGGCGGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: ICEGLWSLCSSVSIT*SSSNSSMLSRKAVL Trigger: TAAGACCGCCTTCCTGCTCAACATTGAGCTGTTTGAGGAGCTGCAGGTGATGCTGACAGAGGAACACAAAGACCAGAGTCCCTCACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CAA 90 bp | AAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATGGTGCAGGGGCAGTATCTaGCACCAGGCTAGCAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KTEIRDRNVWKRISKWPWCRGSI*HQASRP Trigger: AGGCCTGCTAGCCTGGTGCAAGATACTGCCCCTGCA...CCATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGAAAGGAAACACAGGGAGTGGGCTAGGGACCCCAAAAGCTTTCTTAGAGTCAAACAGCTCAATGTaGAGCAGGAAGGCGGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: REKGNTGSGLGTPKAFLESNSSM*SRKAVL Trigger: TAAGACCGCCTTCCTGCTCAACATTGAGCTGTTTGA...CTCTAAGAAAGCTTTTGGGGTCCCTAGCCCACTCCCTGTGTTTCCTTTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CAA 90 bp | ACAAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATTGGATGTGTACCTCCTaGGTGGCCTCCTTCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: TRQKYETEMSGNGYQSGHWMCTS*VASFKA Trigger: GGCCTTGAAGGAGGCCACCAAGGAGGTACACATCCA...ATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS-3UTR CAA 90 bp | ACAAGACAGAAATACGAGACAGAAATGTCTGGAAACGGATATCAAAGTGGCCATTCTGTCACCCTGTGCTaGACCTCAGGTGTCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: TRQKYETEMSGNGYQSGHSVTLC*TSGVIS Trigger: GGAGATGACACCTGAGGTCAAGCACAGGGTGACAGA...ATGGCCACTTTGATATCCGTTTCCAGACATTTCTGTCTCGTATTTCTGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS TCA 72 bp | GAGAGTGAGGACCCACTGGAGGAGCGGTGTCTGGGATaGGCTAGTGCTGATCTGGGGTTTCCCTCGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ESEDPLEERCLG*ASADLGFPSGC Trigger: ACACCCCGAGGGAAACCCCAGATCAGCACTAGCTCATCCCAGACACCGCTCCTCCAGTGGGTCCTCACTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS TCA 72 bp | GGCCTTCTGTGCAATCTTCTTCAGGACCTGACCCCCTaGGAGGTCACCCAGGTAGCGGGTATATGCGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GLLCNLLQDLTP*EVTQVAGICVG Trigger: GCCCACGCATATACCCGCTACCTGGGTGACCTCTCAGGGGGTCAGGTCCTGAAGAAGATTGCACAGAAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CCA 72 bp | AAGCTGAGAGTGAGGACCCACTGGAGGAGCGGTGTCTaGGATGAGCTAGTGCTGATCTGGGGTTTCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: KLRVRTHWRSGV*DELVLIWGFPR Trigger: CCGAGGGAAACCCCAGATCAGCACTAGCTCATCCCAGACACCGCTCCTCCAGTGGGTCCTCACTCTCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CCA 72 bp | CACCTCGTGGAGACGCTTTACATAGTGCTGTGTGGCTaGCGTGCAAGGGATGATTTCCTGCCAGTGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: HLVETLYIVLCG*RARDDFLPVRP Trigger: GGGCCTCACTGGCAGGAAATCATCCCTTGCACGCCAGCCACACAGCACTATGTAAAGCGTCTCCACGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS TCA 72 bp | GCTTTACATAGTGCTGTGTGGCTGGCGTGCAAGGGATaGTTTCCTGCCAGTGAGGCCCATACCAGAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ALHSAVWLACKG*FPASEAHTRRP Trigger: TGGCCTTCTGGTATGGGCCTCACTGGCAGGAAATCATCCCTTGCACGCCAGCCACACAGCACTATGTAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CCA 72 bp | ACTCAGCATTCTCGGCTTGGATGTGTACCTCCTTGGTaGCCTCCTTCAAGGCCTCAGACAAATCCTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TQHSRLGCVPPW*PPSRPQTNPGA Trigger: TGCCCCAGGATTTGTCTGAGGCCTTGAAGGAGGCCACCAAGGAGGTACACATCCAAGCCGAGAATGCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CAA 90 bp | TGTTCCTCTGTCAGCATCACCTGCAGCTCCTCAAACAGCTCAATGTaGAGCAGGAAGGCGGTCTTAGCCTCTTCTGTCACCCTGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CSSVSITCSSSNSSM*SRKAVLASSVTLCL Trigger: CAAGCACAGGGTGACAGAAGAGGCTAAGACCGCCTTCCTGCTCAACATTGAGCTGTTTGAGGAGCTGCAGGTGATGCTGACAGAGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS GCA 72 bp | AGCAGGAAGGCGGTCTTAGCCTCTTCTGTCACCCTGTaGTTGACCTCAGGTGTCATCTCCAGAGTGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SRKAVLASSVTL*LTSGVISRVFI Trigger: AATGAACACTCTGGAGATGACACCTGAGGTCAAGCACAGGGTGACAGAAGAGGCTAAGACCGCCTTCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CAA 72 bp | ATGAACTCAGCATTCTCGGCTTGGATGTGTACCTCCTaGGTGGCCTCCTTCAAGGCCTCAGACAAATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: MNSAFSAWMCTS*VASFKASDKSW Trigger: CCAGGATTTGTCTGAGGCCTTGAAGGAGGCCACCAAGGAGGTACACATCCAAGCCGAGAATGCTGAGTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CAA 72 bp | AGGAAGGCGGTCTTAGCCTCTTCTGTCACCCTGTGCTaGACCTCAGGTGTCATCTCCAGAGTGTTCATTCGA | + |
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Preference number: 6 (lower is better) Translates to: RKAVLASSVTLC*TSGVISRVFIR Trigger: TCGAATGAACACTCTGGAGATGACACCTGAGGTCAAGCACAGGGTGACAGAAGAGGCTAAGACCGCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CAA 90 bp | AAGTTCTTCATGAACTCAGCATTCTCGGCTTGGATGTGTACCTCCTaGGTGGCCTCCTTCAAGGCCTCAGACAAATCCTGGGGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: KFFMNSAFSAWMCTS*VASFKASDKSWGML Trigger: CAGCATGCCCCAGGATTTGTCTGAGGCCTTGAAGGAGGCCACCAAGGAGGTACACATCCAAGCCGAGAATGCTGAGTTCATGAAGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CAA 90 bp | CACCTGACCCTTCTGAAAGTTCTTCATGAACTCAGCATTCTCGGCTaGGATGTGTACCTCCTTGGTGGCCTCCTTCAAGGCCTCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: HLTLLKVLHELSILG*DVYLLGGLLQGLRQ Trigger: TTGTCTGAGGCCTTGAAGGAGGCCACCAAGGAGGTACACATCCAAGCCGAGAATGCTGAGTTCATGAAGAACTTTCAGAAGGGTCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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| CDS CAA 72 bp | CTTCTGAAAGTTCTTCATGAACTCAGCATTCTCGGCTaGGATGTGTACCTCCTTGGTGGCCTCCTTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLKVLHELSILG*DVYLLGGLLQG Trigger: GCCTTGAAGGAGGCCACCAAGGAGGTACACATCCAAGCCGAGAATGCTGAGTTCATGAAGAACTTTCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005548.8 |
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