Pregenerated sensors for HMMR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020330Ensembl transcript IDs: ENSMUST00000020579.9
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCATaGCCTCTGCATCAGCTCCTACTTCCTGACCTGCTTGAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: AEQARGSKPVRNVPP*PLHQLLLPDLLEFQ Trigger: CTGGAACTCAAGCAGGTCAGGAAGTAGGAGCTGATGCAGAGGCCATGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 90 bp | GTTACAGCAAAGACAACAGTGTTTTGGAGATGCCAGTACCATAAATaGCTACCAAGAACAGCAGCAGCAGTGGAGTACAGGCATCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VTAKTTVFWRCQYHK*LPRTAAAVEYRHLE Trigger: CTCCAGATGCCTGTACTCCACTGCTGCTGCTGTTCTTGGTAGTCATTTATGGTACTGGCATCTCCAAAACACTGTTGTCTTTGCTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 90 bp | GTTATGTTTAAGAGTCATACTGGTTTTGAAGACATAAAGAGCAGCTaGGGCTTGGCATGTGAGAGGCCATGGAAGGCCACTGGTAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: VMFKSHTGFEDIKSS*GLACERPWKATGKG Trigger: ACCTTTACCAGTGGCCTTCCATGGCCTCTCACATGCCAAGCCTCAGCTGCTCTTTATGTCTTCAAAACCAGTATGACTCTTAAACATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR CCA 90 bp | TGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAGCTTGTTTCTTaGTCTGATGTTTATGCAGGAACAGAAACCCTGACTAAGACAGAG | + |
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Preference number: 1 (lower is better) Translates to: WKCKLNKPFPPQLVS*SDVYAGTETLTKTE Trigger: CTCTGTCTTAGTCAGGGTTTCTGTTCCTGCATAAACATCAGACCAAGAAACAAGCTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTTCCCTCCATGGCCTCTaGATCAGCTCCTACTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSSLHGL*ISSYFL Trigger: CAGGAAGTAGGAGCTGATGCAGAGGCCATGGAGGGA...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR GCA 90 bp | ATTATTGATCAAGGGTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTCCTACTTCCTGACCTaGTTGAGTTCCAGTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: IIDQGWEGPLWLVLSLGWSYFLT*LSSSPD Trigger: GTCAGGACTGGAACTCAAGCAGGTCAGGAAGTAGGA...CCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCACCCTTGATCAATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTCAGGAACAGAAACCCTaGCTAAGACAGAGAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSQEQKP*LRQRTN Trigger: ATTTGTTCTCTGTCTTAGTCAGGGTTTCTGTTCCTG...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR CCA 90 bp | TGCATCAGCTCCTACTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGCCCCAGCTTGTTTCTTaGTCTGATGTTTATGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: CISSYFLTCLSSSPDFLWPQLVS*SDVYAG Trigger: TCCTGCATAAACATCAGACCAAGAAACAAGCTGGGG...CCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGTAGGAGCTGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCAACAGAGAACAAATGCTaGATTACCGTTTCATATACC | + |
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Preference number: 2 (lower is better) Translates to: RKQAEQARGSKPVRNVPPTENKC*ITVSYT Trigger: GGTATATGAAACGGTAATTCAGCATTTGTTCTCTGT...TGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGCCTATGAGAGGCTATTGGTGAAGCCTAGTTACAGCAAAGACAACAGTAGACGTATACTTCCATaGTTCTTGAAGTTGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: KRAYERLLVKPSYSKDNSRRILP*FLKLHL Trigger: CAGATGCAACTTCAAGAATCATGGAAGTATACGTCT...ACTGTTGTCTTTGCTGTAACTAGGCTTCACCAATAGCCTCTCATAGGCTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR TCA 90 bp | GAGTTATCACAGAGAAAGGAGCTTCAGGTGAGAAAATGCCTTCATGAGATCCAAGCTTGTTTCTTGGTCTaGTGTTTATGCAGGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ELSQRKELQVRKCLHEIQACFLV*CLCRNR Trigger: TCTGTTCCTGCATAAACATCAGACCAAGAAACAAGC...TTGGATCTCATGAAGGCATTTTCTCACCTGAAGCTCCTTTCTCTGTGATAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGAGCACAAAGAGGCTGTGTTCCAGAGATAGACAAGGTTCTACCTTAGCTGAGGGCCCCTTGTGGTaGGTGCTGTCTCTAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SESTKRLCSRDRQGSTLAEGPLW*VLSLGW Trigger: CCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTC...AGCTAAGGTAGAACCTTGTCTATCTCTGGAACACAGCCTCTTTGTGCTCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR CCA 72 bp | TACCAAGAACAGCAGCAGCAGTGGAGTACAGGCATCTaGAGCCTAGAAGACAAGTTGTGTGCTACAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: YQEQQQQWSTGI*SLEDKLCATKG Trigger: GCCCTTTGTAGCACACAACTTGTCTTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGTTCTTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR CAA 90 bp | TGCATCAGCTCCTACTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGCCTTTCCTCCCCAGCTaGTTTCTTGGTCTGATGTTT | + |
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Preference number: 3 (lower is better) Translates to: CISSYFLTCLSSSPDFLWPFLPS*FLGLMF Trigger: AAACATCAGACCAAGAAACAAGCTGGGGAGGAAAGG...CCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGTAGGAGCTGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 72 bp | CAGCTCCTACTTCCTGACCTGCTTGAGTTCCAGTCCTaGCTTCCTTTGGTGATGAACAGCAGTATGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: QLLLPDLLEFQS*LPLVMNSSMEV Trigger: CACTTCCATACTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGTAGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 72 bp | AAGAGTCATACTGGTTTTGAAGACATAAAGAGCAGCTaGGGCTTGGCATGTGAGAGGCCATGGAAGGCCACT | + |
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Preference number: 3 (lower is better) Translates to: KSHTGFEDIKSS*GLACERPWKAT Trigger: AGTGGCCTTCCATGGCCTCTCACATGCCAAGCCTCAGCTGCTCTTTATGTCTTCAAAACCAGTATGACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR CCA 72 bp | AACTGTAAGGCATTTTTCTCAATTATTGATCAAGGGTaGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: NCKAFFSIIDQG*EGPLWLVLSLG Trigger: GCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCACCCTTGATCAATAATTGAGAAAAATGCCTTACAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR CCA 72 bp | AGTACCATAAATGACTACCAAGAACAGCAGCAGCAGTaGAGTACAGGCATCTGGAGCCTAGAAGACAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: STINDYQEQQQQ*STGIWSLEDKL Trigger: CAACTTGTCTTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGTTCTTGGTAGTCATTTATGGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGAGCACAAAGAGGCTGTGTTCCAGAGATAGACAAGGTTCTACCTTAGCTTCTAGGCTGGTAGACTaGGGTTCTGTAAGAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SESTKRLCSRDRQGSTLASRLVD*GSVRKQ Trigger: TTGCTTTCTTACAGAACCCAAGTCTACCAGCCTAGA...AGCTAAGGTAGAACCTTGTCTATCTCTGGAACACAGCCTCTTTGTGCTCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 72 bp | ACCACCTGGAGTTATCACAGAGAAAGGAGCTTCAGGTaGGAAAATGCCTTCATGAGATCCAACTGTAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: TTWSYHRERSFR*ENAFMRSNCKA Trigger: TGCCTTACAGTTGGATCTCATGAAGGCATTTTCTCACCTGAAGCTCCTTTCTCTGTGATAACTCCAGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 72 bp | AAGACAACAGTGTTTTGGAGATGCCAGTACCATAAATaGCTACCAAGAACAGCAGCAGCAGTGGAGTACAGG | + |
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Preference number: 3 (lower is better) Translates to: KTTVFWRCQYHK*LPRTAAAVEYR Trigger: CCTGTACTCCACTGCTGCTGCTGTTCTTGGTAGTCATTTATGGTACTGGCATCTCCAAAACACTGTTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 72 bp | TCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGCTaGATAAACCCTTTCCTCCCCAGCTTGTTTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SFGDEQQYGSVS*INPFLPSLFLG Trigger: ACCAAGAAACAAGCTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATACTGCTGTTCATCACCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR-3UTR CAA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACCATTTTTCTCAATTATaGATCAAGGGTGGGAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: CALIFFPLEGRKYFSGDHHFSQL*IKGGRA Trigger: GGCCCTCCCACCCTTGATCAATAATTGAGAAAAATG...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR TCA 72 bp | CTAAAAATCATACATGTAAAGTTTTTCAGATTTGCTTaGGAGCCTGGCCATGTGATGCTTGCCTTAAATCCT | + |
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Preference number: 3 (lower is better) Translates to: LKIIHVKFFRFA*EPGHVMLALNP Trigger: AGGATTTAAGGCAAGCATCACATGGCCAGGCTCTCAAGCAAATCTGAAAAACTTTACATGTATGATTTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | CAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCATGGCCTCTGCATCAGTGCACACTTTCCAACTaGGCAGTGACGTCCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QARGSKPVRNVPPWPLHQCTLSN*AVTSLR Trigger: TCTGAGGGACGTCACTGCTCAGTTGGAAAGTGTGCA...CTGATGCAGAGGCCATGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTAAGCCGTTTTTCCAGTaGAGCATTACTCGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSKPFFQ*SITRRE Trigger: CTCTCTGCGAGTAATGCTTCACTGGAAAAACGGCTT...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| 3UTR CAA 72 bp | CCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTaGGGTTCTGTAAGAAAGCAAGCTGAGCAAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLVVGAVSRLVD*GSVRKQAEQAR Trigger: CCTGGCTTGCTCAGCTTGCTTTCTTACAGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTCTCTTGCTGCAGAAGTaGCTGGCTTTGCAATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSLLLQK*LALQFF Trigger: AAAGAATTGCAAAGCCAGTCACTTCTGCAGCAAGAG...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | CAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCATGGCCTCTGCATCAGAGTTCCTTCTCTTGCTaGAGAAGTGACTGGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: QARGSKPVRNVPPWPLHQSSFSC*RSDWLC Trigger: GCAAAGCCAGTCACTTCTGCAGCAAGAGAAGGAACT...CTGATGCAGAGGCCATGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | TCTGAGAGCACAAAGAGGCTGTGTTCCAGAGATAGACAAGGTTCTACCTTAGCTTCCGTGAGGTCCTTCTaGGTGGCCTGCAGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SESTKRLCSRDRQGSTLASVRSF*VACSFS Trigger: GCTGAAGCTGCAGGCCACTCAGAAGGACCTCACGGA...AGCTAAGGTAGAACCTTGTCTATCTCTGGAACACAGCCTCTTTGTGCTCTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTTGCTGCATTGAGCTTTaGTTCTGTCTTCTCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSCCIEL*FCLLQF Trigger: GAATTGGAGAAGACAGAAGCAAAGCTCAATGCAGCA...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | AGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCAGACAGTTCCTTCTCTTaGTGCAGAAGTGACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RKQAEQARGSKPVRNVPPDSSFS*CRSDWL Trigger: AAGCCAGTCACTTCTGCAGCAAGAGAAGGAACTGTC...TGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | ATTATTGATCAAGGGTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTGTTTTCTCTCTGACTaGTGCATTGAGCTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: IIDQGWEGPLWLVLSLGWCFLSD*CIELCF Trigger: GAAGCAAAGCTCAATGCAGCAGTCAGAGAGAAAACA...CCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCACCCTTGATCAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | CAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCATGGCCTCTGCATCAGATTATACTTCTCTTGTaGAATCAAGATGGCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QARGSKPVRNVPPWPLHQIILLL*NQDGLG Trigger: GCCCAAGCCATCTTGATTGCACAAGAGAAGTATAAT...CTGATGCAGAGGCCATGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | TGCATCAGCTCCTACTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGAAGGGTCAAAGTGTCTaGTGCCCAGAGCTTTATCTA | + |
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Preference number: 4 (lower is better) Translates to: CISSYFLTCLSSSPDFLWKGQSV*CPELYL Trigger: TAGATAAAGCTCTGGGCATCAGACACTTTGACCCTT...CCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGTAGGAGCTGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CCA 90 bp | TGCATCAGCTCCTACTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGAGCTTTCCCTCCAGCTaGACTATTTTTCCCTTAGAC | + |
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Preference number: 4 (lower is better) Translates to: CISSYFLTCLSSSPDFLWSFPSS*TIFPLD Trigger: GTCTAAGGGAAAAATAGTCCAGCTGGAGGGAAAGCT...CCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGTAGGAGCTGATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CCA 90 bp | GTTTCTTGGTCTGATGTTTATGCAGGAACAGAAACCCTGACTAAGACAGAGAACTGCTCCTCCTTCTGCTaGACCGCATCCAACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VSWSDVYAGTETLTKTENCSSFC*TASNSA Trigger: GGCTGAGTTGGATGCGGTCCAGCAGAAGGAGGAGCA...GTTCTCTGTCTTAGTCAGGGTTTCTGTTCCTGCATAAACATCAGACCAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | ATTATTGATCAAGGGTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTCTTTATCATTCTTCTaGGAGTCCTTCTTTGACACA | + |
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Preference number: 4 (lower is better) Translates to: IIDQGWEGPLWLVLSLGWSLSFF*ESFFDT Trigger: TGTGTCAAAGAAGGACTCTCAGAAGAATGATAAAGA...CCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCACCCTTGATCAATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | AGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCATTGACACCTCCGATTTaGGTTGGCTATTTTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: RKQAEQARGSKPVRNVPPLTPPI*VGYFHL Trigger: AAGATGAAAATAGCCAACTCAAATCGGAGGTGTCAA...TGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACAACCCGAAGGGTCATTaGATCTCTTCAGGGGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: CALIFFPLEGRKYFSGDHNPKGH*ISSGAP Trigger: AGGCGCCCCTGAAGAGATTCAATGACCCTTCGGGTT...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAGCCTATGAGAGGCTATTGGTGAAGCCTAGTTACAGCAAAGACAACAGTTCTGCATCTCAGCACTaGGAGTTTCAGCCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: KRAYERLLVKPSYSKDNSSASQH*EFQPFL Trigger: GAGAAAGGGCTGAAACTCTCAGTGCTGAGATGCAGA...ACTGTTGTCTTTGCTGTAACTAGGCTTCACCAATAGCCTCTCATAGGCTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACACCAGCCTTTCACTCTaGTCCTCCTTCTGCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: CALIFFPLEGRKYFSGDHTSLSL*SSFCWT Trigger: GGTCCAGCAGAAGGAGGAGCAGAGTGAAAGGCTGGT...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | ATTATTGATCAAGGGTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGAAAATTCTCCTTAGATaGATGACAAAAAGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: IIDQGWEGPLWLVLSLGWKILLR*MTKSLG Trigger: TCCAAGGCTTTTTGTCATGCATCTAAGGAGAATTTT...CCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCACCCTTGATCAATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | GAGTTATCACAGAGAAAGGAGCTTCAGGTGAGAAAATGCCTTCATGAGATCCAAAAGATGGCTTGGGCGTaGGCAGCAATATGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ELSQRKELQVRKCLHEIQKMAWA*AAICFS Trigger: GGAGAAACATATTGCTGCTCACGCCCAAGCCATCTT...TTGGATCTCATGAAGGCATTTTCTCACCTGAAGCTCCTTTCTCTGTGATAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR GCA 90 bp | CAAGAACAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAAGACAAGTTGATGTTCATTCAACAATaGCTGTTTCTCGGCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QEQQQQWSTGIWSLEDKLMFIQQ*LFLGFK Trigger: TTTGAAGCCGAGAAACAGGCATTGTTGAATGAACAT...CAACTTGTCTTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | CAGCTGGACTTGGTTATGTTTAAGAGTCATACTGGTTTTGAAGACATAAAGAGCTGCTCACTTTCCAACTaGGCAGTGACGTCCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QLDLVMFKSHTGFEDIKSCSLSN*AVTSLR Trigger: TCTGAGGGACGTCACTGCTCAGTTGGAAAGTGAGCA...GCTCTTTATGTCTTCAAAACCAGTATGACTCTTAAACATAACCAAGTCCAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR TCA 90 bp | GAGTTATCACAGAGAAAGGAGCTTCAGGTGAGAAAATGCCTTCATGAGATCCAACTGAGATCGGAGTTTTaGCACCTCCGATTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSQRKELQVRKCLHEIQLRSEF*HLRFEL Trigger: CAACTCAAATCGGAGGTGTCAAAACTCCGATCTCAG...TTGGATCTCATGAAGGCATTTTCTCACCTGAAGCTCCTTTCTCTGTGATAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTGGTCTGATGTTTATGCAGGAACAGAAACCCTGACTAAGACAGAGAACGTCCCTCAGACTCTGTaGTGTGTCATTGTACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSWSDVYAGTETLTKTENVPQTL*CVIVLL Trigger: GAGAAGTACAATGACACAGCACAGAGTCTGAGGGAC...GTTCTCTGTCTTAGTCAGGGTTTCTGTTCCTGCATAAACATCAGACCAAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGAGCACAAAGAGGCTGTGTTCCAGAGATAGACAAGGTTCTACCTTAGCTTCTGTTTCAAGTAGCTaGCATTTAACAGTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SESTKRLCSRDRQGSTLASVSSS*HLTVRS Trigger: AGACCTGACTGTTAAATGCCAGCTACTTGAAACAGA...AGCTAAGGTAGAACCTTGTCTATCTCTGGAACACAGCCTCTTTGTGCTCTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGACTTGGTTATGTTTAAGAGTCATACTGGTTTTGAAGACATAAAGAGCCAGTTGTTCTGCAGTTaGCTTCGTTTCCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLDLVMFKSHTGFEDIKSQLFCS*LRFLFQ Trigger: CTGGAAGAGGAAACGAAGTCAACTGCAGAACAACTG...GCTCTTTATGTCTTCAAAACCAGTATGACTCTTAAACATAACCAAGTCCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGAGCACAAAGAGGCTGTGTTCCAGAGATAGACAAGGTTCTACCTTAGCTGGGCAATATCTACTTTaGATTTTTCCACTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SESTKRLCSRDRQGSTLAGQYLL*IFPLDQ Trigger: CTGATCAAGTGGAAAAATGCAAAGTAGATATTGCCC...AGCTAAGGTAGAACCTTGTCTATCTCTGGAACACAGCCTCTTTGTGCTCTCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR GCA 90 bp | CTGGACTTGGTTATGTTTAAGAGTCATACTGGTTTTGAAGACATAAAGAGCAGCCTCTCTGTCAGGATCTaGATCTCAGCACTGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDLVMFKSHTGFEDIKSSLSVRI*ISALRV Trigger: AACTCTCAGTGCTGAGATGCAGATCCTGACAGAGAG...GCTGCTCTTTATGTCTTCAAAACCAGTATGACTCTTAAACATAACCAAGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR TCA 90 bp | CTAAGACAGAGAACAAATGCTGAATTACCGTTTCATATACCTAAGACTAGGCAGTTCTCCTTAGATGCATaGCAAAAAGCCTTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRQRTNAELPFHIPKTRQFSLDA*QKALEG Trigger: CCCTTCCAAGGCTTTTTGTCATGCATCTAAGGAGAA...CTGCCTAGTCTTAGGTATATGAAACGGTAATTCAGCATTTGTTCTCTGTCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTGGTCTGATGTTTATGCAGGAACAGAAACCCTGACTAAGACAGAGAACTGCTGCAGAAGTGACTaGCTTTGCAATTCTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSWSDVYAGTETLTKTENCCRSD*LCNSFC Trigger: ACAAAAAGAATTGCAAAGCCAGTCACTTCTGCAGCA...GTTCTCTGTCTTAGTCAGGGTTTCTGTTCCTGCATAAACATCAGACCAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR TCA 90 bp | CTAAGACAGAGAACAAATGCTGAATTACCGTTTCATATACCTAAGACTAGGCAGCTGAGAGTCCTTCTTTaGCACAGACTTCTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRQRTNAELPFHIPKTRQLRVLL*HRLLCF Trigger: AAAGCAAAGAAGTCTGTGTCAAAGAAGGACTCTCAG...CTGCCTAGTCTTAGGTATATGAAACGGTAATTCAGCATTTGTTCTCTGTCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACTCTCTCTCTTATTTCTaGGTTTCATCAATTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CALIFFPLEGRKYFSGDHSLSYF*VSSIPG Trigger: GCCTGGAATTGATGAAACTCAGAAATAAGAGAGAGA...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGACAGAGAACAAATGCTGAATTACCGTTTCATATACCTAAGACTAGGCAGTTTCTCTCTGACTGCTaGATTGAGCTTTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRQRTNAELPFHIPKTRQFLSDC*IELCFC Trigger: ACAGAAGCAAAGCTCAATGCAGCAGTCAGAGAGAAA...CTGCCTAGTCTTAGGTATATGAAACGGTAATTCAGCATTTGTTCTCTGTCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGCCTATGAGAGGCTATTGGTGAAGCCTAGTTACAGCAAAGACAACAGTCATATTCTTGATTTGTaGTCTCAGCTGTCAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: KRAYERLLVKPSYSKDNSHILDL*SQLSIS Trigger: AGATATTGACAGCTGAGAGCACAAATCAAGAATATG...ACTGTTGTCTTTGCTGTAACTAGGCTTCACCAATAGCCTCTCATAGGCTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGCCTATGAGAGGCTATTGGTGAAGCCTAGTTACAGCAAAGACAACAGTATCTTGAACCATCCTTaGATATTCTTGATTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRAYERLLVKPSYSKDNSILNHP*IFLICA Trigger: AGCACAAATCAAGAATATGCAAGGATGGTTCAAGAT...ACTGTTGTCTTTGCTGTAACTAGGCTTCACCAATAGCCTCTCATAGGCTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR TCA 90 bp | CTGGACTTGGTTATGTTTAAGAGTCATACTGGTTTTGAAGACATAAAGAGCAGCTTATCTAATTCTCCCTaGAGTCTGAGCTCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDLVMFKSHTGFEDIKSSLSNSP*SLSSFC Trigger: ACAAAATGAGCTCAGACTTCAGGGAGAATTAGATAA...GCTGCTCTTTATGTCTTCAAAACCAGTATGACTCTTAAACATAACCAAGTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| 3UTR CAA 72 bp | TCTAAAAATCATACATGTAAAGTTTTTCAGATTTGCTaGAGAGCCTGGCCATGTGATGCTTGCCTTAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SKNHTCKVFQIC*RAWPCDACLKS Trigger: GGATTTAAGGCAAGCATCACATGGCCAGGCTCTCAAGCAAATCTGAAAAACTTTACATGTATGATTTTTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS GCA 90 bp | GTTGACTTCGTTTCCTCTTCCAGCTGTTTAACCAGCCTTTCACTCTaGTCCTCCTTCTGCTGGACCGCATCCAACTCAGCCAGGGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDFVSSSSCLTSLSL*SSFCWTASNSARAS Trigger: GCTCGCCCTGGCTGAGTTGGATGCGGTCCAGCAGAAGGAGGAGCAGAGTGAAAGGCTGGTTAAACAGCTGGAAGAGGAAACGAAGTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS TCA 90 bp | CCCTCCAGCTGGACTATTTTTCCCTTAGACTCCGTGAGGTCCTTCTaGGTGGCCTGCAGCTTCAGCTCCATGCCTTCCTGTTTGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: PSSWTIFPLDSVRSF*VACSFSSMPSCLTI Trigger: GATGGTCAAACAGGAAGGCATGGAGCTGAAGCTGCAGGCCACTCAGAAGGACCTCACGGAGTCTAAGGGAAAAATAGTCCAGCTGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS GCA 90 bp | TCCTCTTCCAGCTGTTTAACCAGCCTTTCACTCTGCTCCTCCTTCTaGTGGACCGCATCCAACTCAGCCAGGGCGAGCTTTAGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSCLTSLSLCSSF*WTASNSARASFSSS Trigger: AGAAGAGCTAAAGCTCGCCCTGGCTGAGTTGGATGCGGTCCAGCAGAAGGAGGAGCAGAGTGAAAGGCTGGTTAAACAGCTGGAAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CAA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTGCCCTTTCTCTATCCTaGCTGACAAGGTTGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSALSLS*LTRLSL Trigger: AAGAGACAACCTTGTCAGCAAGGATAGAGAAAGGGC...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS CCA 90 bp | TCTTCCAGCTGTTTAACCAGCCTTTCACTCTGCTCCTCCTTCTGCTaGACCGCATCCAACTCAGCCAGGGCGAGCTTTAGCTCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSCLTSLSLCSSFC*TASNSARASFSSSL Trigger: TAAAGAAGAGCTAAAGCTCGCCCTGGCTGAGTTGGATGCGGTCCAGCAGAAGGAGGAGCAGAGTGAAAGGCTGGTTAAACAGCTGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCATGGCCTCTGCATCAGCTCTGTGCTGTGTCATaGTACTTCTCTTGCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: QARGSKPVRNVPPWPLHQLCAVS*YFSCTL Trigger: AAGTGTGCAAGAGAAGTACAATGACACAGCACAGAG...CTGATGCAGAGGCCATGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCATGGCCTCTGCATCAGTCTGAGAGTCCTTCTTaGACACAGACTTCTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QARGSKPVRNVPPWPLHQSESPS*TQTSLL Trigger: AAGCAAAGAAGTCTGTGTCAAAGAAGGACTCTCAGA...CTGATGCAGAGGCCATGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTTTTGACACCTCCGATTaGAGTTGGCTATTTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSFDTSD*SWLFSS Trigger: AGATGAAAATAGCCAACTCAAATCGGAGGTGTCAAA...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGGAATGTCCCTCCACTCTGTGCTGTGTCATaGTACTTCTCTTGCTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RKQAEQARGSKPVRNVPPLCAVS*YFSCSL Trigger: AAGTGAGCAAGAGAAGTACAATGACACAGCACAGAG...TGGAGGGACATTCCTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CAA 90 bp | GTGGGAGGGCCCCTTGTGGTTGGTGCTGTCTCTAGGCTGGTAGACTTGGGTTCTAATCTTGAACCATCCTaGCATATTCTTGATTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGGPLVVGAVSRLVDLGSNLEPS*HILDLC Trigger: GCACAAATCAAGAATATGCAAGGATGGTTCAAGATT...AGAACCCAAGTCTACCAGCCTAGAGACAGCACCAACCACAAGGGGCCCTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | GAGCAGAGCTGCTGCTGCAGACGAGCAGACAGTTCCTTCTCTTGCTaGAGAAGTGACTGGCTTTGCAATTCTTTTTGTTGCAGCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQSCCCRRADSSFSC*RSDWLCNSFCCSFS Trigger: TGAAAAGCTGCAACAAAAAGAATTGCAAAGCCAGTCACTTCTGCAGCAAGAGAAGGAACTGTCTGCTCGTCTGCAGCAGCAGCTCTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | CTCTTGCTCACTTTCCAACTGAGCAGTGACGTCCCTCAGACTCTGTaGTGTGTCATTGTACTTCTCTTGCTCACTTTCCAACTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLTFQLSSDVPQTL*CVIVLLLLTFQLSS Trigger: ACTGCTCAGTTGGAAAGTGAGCAAGAGAAGTACAATGACACAGCACAGAGTCTGAGGGACGTCACTGCTCAGTTGGAAAGTGAGCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | CTCTTGCACACTTTCCAACTGAGCAGTGACGTCCCTCAGACTCTGTaGTGTGTCATTGTACTTCTCTTGCTCACTTTCCAACTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLHTFQLSSDVPQTL*CVIVLLLLTFQLSS Trigger: ACTGCTCAGTTGGAAAGTGAGCAAGAGAAGTACAATGACACAGCACAGAGTCTGAGGGACGTCACTGCTCAGTTGGAAAGTGTGCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | AAAGAGCAGAGCTGCTGCTGCAGACGAGCAGACAGTTCCTTCTCTTaGTGCAGAAGTGACTGGCTTTGCAATTCTTTTTGTTGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KEQSCCCRRADSSFS*CRSDWLCNSFCCSF Trigger: AAAGCTGCAACAAAAAGAATTGCAAAGCCAGTCACTTCTGCAGCAAGAGAAGGAACTGTCTGCTCGTCTGCAGCAGCAGCTCTGCTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | AGTGACGTCCCTCAGACTCTGTGCTGTGTCATTATACTTCTCTTGTaGAATCAAGATGGCTTGGGCGTGAGCAGCAATATGTTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDVPQTLCCVIILLL*NQDGLGVSSNMFLQ Trigger: CTGGAGAAACATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACAGCACAGAGTCTGAGGGACGTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 90 bp | TCTGTCTTCTCCAATTCAGATTCCATGTCCTGGATCCGTTTGTCCTaGGTCCCTCGCTCTTGCAAAAGAGCGCGAATCTCTTTTTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SVFSNSDSMSWIRLS*VPRSCKRARISFSN Trigger: ATTAGAAAAAGAGATTCGCGCTCTTTTGCAAGAGCGAGGGACTCAGGACAAACGGATCCAGGACATGGAATCTGAATTGGAGAAGACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 90 bp | CTGCTGCTGCAGACGAGCAGACAGTTCCTTCTCTTGCTGCAGAAGTaGCTGGCTTTGCAATTCTTTTTGTTGCAGCTTTTCATATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQTSRQFLLLLQK*LALQFFLLQLFIFL Trigger: CAAGAATATGAAAAGCTGCAACAAAAAGAATTGCAAAGCCAGTCACTTCTGCAGCAAGAGAAGGAACTGTCTGCTCGTCTGCAGCAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | AGTGACTGGCTTTGCAATTCTTTTTGTTGCAGCTTTTCATATTCTTaGCTTTCCAGAGCCAGCCTCTCTGTCAGGATCTGCATCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDWLCNSFCCSFSYS*LSRASLSVRICISA Trigger: TGCTGAGATGCAGATCCTGACAGAGAGGCTGGCTCTGGAAAGGCAAGAATATGAAAAGCTGCAACAAAAAGAATTGCAAAGCCAGTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | TCCTTCTCTTGCTGCAGAAGTGACTGGCTTTGCAATTCTTTTTGTTaGAGCTTTTCATATTCTTGCCTTTCCAGAGCCAGCCTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSCCRSDWLCNSFC*SFSYSCLSRASLSV Trigger: GACAGAGAGGCTGGCTCTGGAAAGGCAAGAATATGAAAAGCTGCAACAAAAAGAATTGCAAAGCCAGTCACTTCTGCAGCAAGAGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CAA 90 bp | GTTTCTTGGTCTGATGTTTATGCAGGAACAGAAACCCTGACTAAGACAGAGAACTCTCTGACTGCTGCATaGAGCTTTGCTTCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSWSDVYAGTETLTKTENSLTAA*SFASVF Trigger: GAAGACAGAAGCAAAGCTCAATGCAGCAGTCAGAGA...GTTCTCTGTCTTAGTCAGGGTTTCTGTTCCTGCATAAACATCAGACCAAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CAA 90 bp | GAGTTATCACAGAGAAAGGAGCTTCAGGTGAGAAAATGCCTTCATGAGATCCAAAGAAGTCATTTCCTCTaGGAAAGAGCAGAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELSQRKELQVRKCLHEIQRSHFL*ERAELL Trigger: CAGCAGCTCTGCTCTTTCCAAGAGGAAATGACTTCT...TTGGATCTCATGAAGGCATTTTCTCACCTGAAGCTCCTTTCTCTGTGATAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGCCTATGAGAGGCTATTGGTGAAGCCTAGTTACAGCAAAGACAACAGTGTCATTGTACTTCTCTaGCTCACTTTCCAACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KRAYERLLVKPSYSKDNSVIVLL*LTFQLS Trigger: GCTCAGTTGGAAAGTGAGCAAGAGAAGTACAATGAC...ACTGTTGTCTTTGCTGTAACTAGGCTTCACCAATAGCCTCTCATAGGCTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CCA 90 bp | TCAGACTCTGTGCTGTGTCATTATACTTCTCTTGTGCAATCAAGATaGCTTGGGCGTGAGCAGCAATATGTTTCTCCAGTTCAACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SDSVLCHYTSLVQSR*LGREQQYVSPVQLL Trigger: AAGAAGTTGAACTGGAGAAACATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACAGCACAGAGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACTCCATGCCTTCCTGTTaGACCATCATACTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CALIFFPLEGRKYFSGDHSMPSC*TIILLI Trigger: GATGAGGAGTATGATGGTCAAACAGGAAGGCATGGA...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTTGGTCTGATGTTTATGCAGGAACAGAAACCCTGACTAAGACAGAGAACTCAGTTGTTCTGCAGTaGACTTCGTTTCCTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSWSDVYAGTETLTKTENSVVLQ*TSFPLP Trigger: TGGAAGAGGAAACGAAGTCAACTGCAGAACAACTGA...GTTCTCTGTCTTAGTCAGGGTTTCTGTTCCTGCATAAACATCAGACCAAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | GAGTTATCACAGAGAAAGGAGCTTCAGGTGAGAAAATGCCTTCATGAGATCCAACATCCTTGCATATTCTaGATTTGTGCTCTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ELSQRKELQVRKCLHEIQHPCIF*ICALSC Trigger: ACAGCTGAGAGCACAAATCAAGAATATGCAAGGATG...TTGGATCTCATGAAGGCATTTTCTCACCTGAAGCTCCTTTCTCTGTGATAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGAGCACAAAGAGGCTGTGTTCCAGAGATAGACAAGGTTCTACCTTAGCTAAAGGCATCCAGTTGTaGCTGAAAAGGTTTAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SESTKRLCSRDRQGSTLAKGIQL*LKRFSF Trigger: AAAACTAAACCTTTTCAGCAACAACTGGATGCCTTT...AGCTAAGGTAGAACCTTGTCTATCTCTGGAACACAGCCTCTTTGTGCTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACTTAGCTGCTCCTGAGTaGCACCATGTTCATTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: CALIFFPLEGRKYFSGDHLAAPE*HHVHST Trigger: TGTTGAATGAACATGGTGCAACTCAGGAGCAGCTAA...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACTCCTTGCTGACAAGGTaGTCTCTTTCTGTTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CALIFFPLEGRKYFSGDHSLLTR*SLSVSS Trigger: ACTTGAAACAGAAAGAGACAACCTTGTCAGCAAGGA...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACTTGGTTATGTTTAAGAGTCATACTGGTTTTGAAGACATAAAGAGCAGCGTCATTATACTTCTCTaGCACACTTTCCAACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LDLVMFKSHTGFEDIKSSVIILL*HTFQLS Trigger: GCTCAGTTGGAAAGTGTGCAAGAGAAGTATAATGAC...GCTGCTCTTTATGTCTTCAAAACCAGTATGACTCTTAAACATAACCAAGTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | GAGTTATCACAGAGAAAGGAGCTTCAGGTGAGAAAATGCCTTCATGAGATCCAAAAGTCTGAGCTCATTTaGTTTCCTTTTAACAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELSQRKELQVRKCLHEIQKSELI*FPFNKL Trigger: CAGCTTGTTAAAAGGAAACAAAATGAGCTCAGACTT...TTGGATCTCATGAAGGCATTTTCTCACCTGAAGCTCCTTTCTCTGTGATAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
||
| CDS-3UTR CAA 90 bp | CTAAGACAGAGAACAAATGCTGAATTACCGTTTCATATACCTAAGACTAGGCAGGTCATTATACTTCTCTaGTGCAATCAAGATGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LRQRTNAELPFHIPKTRQVIILL*CNQDGL Trigger: CAAGCCATCTTGATTGCACAAGAGAAGTATAATGAC...CTGCCTAGTCTTAGGTATATGAAACGGTAATTCAGCATTTGTTCTCTGTCTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CAA 90 bp | TGTGCCCTGATATTTTTCCCTCTTGAAGGAAGAAAGTATTTTAGTGGAGACCACTTGCATATTCTTGATTaGTGCTCTCAGCTGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: CALIFFPLEGRKYFSGDHLHILD*CSQLSI Trigger: TATTGACAGCTGAGAGCACAAATCAAGAATATGCAA...GTGGTCTCCACTAAAATACTTTCTTCCTTCAAGAGGGAAAAATATCAGGGCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 90 bp | ATCTGTTCTGCAAATCTTGAACCATCCTTGCATATTCTTGATTTGTaGTCTCAGCTGTCAATATCTGCTGTTGAACATCTTCTACACTTT | + |
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Preference number: 5 (lower is better) Translates to: ICSANLEPSLHILDL*SQLSISAVEHLLHF Trigger: AAAGTGTAGAAGATGTTCAACAGCAGATATTGACAGCTGAGAGCACAAATCAAGAATATGCAAGGATGGTTCAAGATTTGCAGAACAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CCA 90 bp | TCTCTATCCTTGCTGACAAGGTTGTCTCTTTCTGTTTCAAGTAGCTaGCATTTAACAGTCAGGTCTTCTATTTGCTTAGAAAATGTAATG | + |
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Preference number: 5 (lower is better) Translates to: SLSLLTRLSLSVSSS*HLTVRSSICLENVM Trigger: CATTACATTTTCTAAGCAAATAGAAGACCTGACTGTTAAATGCCAGCTACTTGAAACAGAAAGAGACAACCTTGTCAGCAAGGATAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGGTTATGTTTAAGAGTCATACTGGTTTTGAAGACATAAAGAGCAGCTTTGCATTTTTCCACTaGATCAGATGCACAGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: LDLVMFKSHTGFEDIKSSFAFFH*IRCTAN Trigger: ATTAGCTGTGCATCTGATCAAGTGGAAAAATGCAAA...GCTGCTCTTTATGTCTTCAAAACCAGTATGACTCTTAAACATAACCAAGTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 72 bp | GTTTCCTCTTCCAGCTGTTTAACCAGCCTTTCACTCTaGTCCTCCTTCTGCTGGACCGCATCCAACTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VSSSSCLTSLSL*SSFCWTASNSA Trigger: GGCTGAGTTGGATGCGGTCCAGCAGAAGGAGGAGCAGAGTGAAAGGCTGGTTAAACAGCTGGAAGAGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 72 bp | TCTTGCCTTTCCAGAGCCAGCCTCTCTGTCAGGATCTaGATCTCAGCACTGAGAGTTTCAGCCCTTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SCLSRASLSVRI*ISALRVSALSL Trigger: TAGAGAAAGGGCTGAAACTCTCAGTGCTGAGATGCAGATCCTGACAGAGAGGCTGGCTCTGGAAAGGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | GTCCCTCAGACTCTGTGCTGTGTCATTGTACTTCTCTaGCTCACTTTCCAACTGAGCAGTGACGTCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VPQTLCCVIVLL*LTFQLSSDVPQ Trigger: CTGAGGGACGTCACTGCTCAGTTGGAAAGTGAGCAAGAGAAGTACAATGACACAGCACAGAGTCTGAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | GTCCCTCAGACTCTGTGCTGTGTCATTGTACTTCTCTaGCACACTTTCCAACTGAGCAGTGACGTCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VPQTLCCVIVLL*HTFQLSSDVPQ Trigger: CTGAGGGACGTCACTGCTCAGTTGGAAAGTGTGCAAGAGAAGTACAATGACACAGCACAGAGTCTGAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 72 bp | TCCAATTCAGATTCCATGTCCTGGATCCGTTTGTCCTaGGTCCCTCGCTCTTGCAAAAGAGCGCGAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SNSDSMSWIRLS*VPRSCKRARIS Trigger: AGAGATTCGCGCTCTTTTGCAAGAGCGAGGGACTCAGGACAAACGGATCCAGGACATGGAATCTGAATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 72 bp | GCTGTGTCATTGTACTTCTCTTGCTCACTTTCCAACTaGGCAGTGACGTCCCTCAGACTCTGTGCTGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: AVSLYFSCSLSN*AVTSLRLCAVS Trigger: TGACACAGCACAGAGTCTGAGGGACGTCACTGCTCAGTTGGAAAGTGAGCAAGAGAAGTACAATGACACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 72 bp | TGCTGCTGCAGACGAGCAGACAGTTCCTTCTCTTGCTaGAGAAGTGACTGGCTTTGCAATTCTTTTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CCCRRADSSFSC*RSDWLCNSFCC Trigger: GCAACAAAAAGAATTGCAAAGCCAGTCACTTCTGCAGCAAGAGAAGGAACTGTCTGCTCGTCTGCAGCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 72 bp | AGCTGCTGCTGCAGACGAGCAGACAGTTCCTTCTCTTaGTGCAGAAGTGACTGGCTTTGCAATTCTTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SCCCRRADSSFS*CRSDWLCNSFC Trigger: ACAAAAAGAATTGCAAAGCCAGTCACTTCTGCAGCAAGAGAAGGAACTGTCTGCTCGTCTGCAGCAGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 72 bp | GCTTTCCAACTGAGCAGTGACGTCCCTCAGACTCTGTaGTGTGTCATTGTACTTCTCTTGCACACTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: AFQLSSDVPQTL*CVIVLLLHTFQ Trigger: TTGGAAAGTGTGCAAGAGAAGTACAATGACACAGCACAGAGTCTGAGGGACGTCACTGCTCAGTTGGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | TGTTTCTCCAGTTCAACTTCTTTCTCTCTCAGCAGGTaGTCCAGCCGCGTCAGTTGTTCTGCAGTTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: CFSSSTSFSLSR*SSRVSCSAVDF Trigger: GAAGTCAACTGCAGAACAACTGACGCGGCTGGACAACCTGCTGAGAGAGAAAGAAGTTGAACTGGAGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | GTCCCTCAGACTCTGTGCTGTGTCATTATACTTCTCTaGTGCAATCAAGATGGCTTGGGCGTGAGCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VPQTLCCVIILL*CNQDGLGVSSN Trigger: ATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACAGCACAGAGTCTGAGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | GCAGCAATATGTTTCTCCAGTTCAACTTCTTTCTCTCTCAGCAGGTaGTCCAGCCGCGTCAGTTGTTCTGCAGTTGACTTCGTTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: AAICFSSSTSFSLSR*SSRVSCSAVDFVSS Trigger: AGAGGAAACGAAGTCAACTGCAGAACAACTGACGCGGCTGGACAACCTGCTGAGAGAGAAAGAAGTTGAACTGGAGAAACATATTGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | AGCAGTGACGTCCCTCAGACTCTGTGCTGTGTCATTATACTTCTCTaGTGCAATCAAGATGGCTTGGGCGTGAGCAGCAATATGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSDVPQTLCCVIILL*CNQDGLGVSSNMFL Trigger: GAGAAACATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACAGCACAGAGTCTGAGGGACGTCACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 72 bp | CATTGTACTTCTCTTGCTCACTTTCCAACTGAGCAGTaGCGTCCCTCAGACTCTGTGCTGTGTCATTGTACT | + |
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Preference number: 6 (lower is better) Translates to: HCTSLAHFPTEQ*RPSDSVLCHCT Trigger: AGTACAATGACACAGCACAGAGTCTGAGGGACGTCACTGCTCAGTTGGAAAGTGAGCAAGAGAAGTACAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 72 bp | CCTCAGACTCTGTGCTGTGTCATTATACTTCTCTTGTaGAATCAAGATGGCTTGGGCGTGAGCAGCAATATG | + |
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Preference number: 6 (lower is better) Translates to: PQTLCCVIILLL*NQDGLGVSSNM Trigger: CATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACAGCACAGAGTCTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | GAAGCATTACTCGCAGAGAGAGATGTTTTCTCTCTGACTGCTGCATaGAGCTTTGCTTCTGTCTTCTCCAATTCAGATTCCATGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: EALLAERDVFSLTAA*SFASVFSNSDSMSW Trigger: CCAGGACATGGAATCTGAATTGGAGAAGACAGAAGCAAAGCTCAATGCAGCAGTCAGAGAGAAAACATCTCTCTCTGCGAGTAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 72 bp | CATTGTACTTCTCTTGCTCACTTTCCAACTGAGCAGTaGCGTCCCTCAGACTCTGTGCTGTGTCATTATACT | + |
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Preference number: 6 (lower is better) Translates to: HCTSLAHFPTEQ*RPSDSVLCHYT Trigger: AGTATAATGACACAGCACAGAGTCTGAGGGACGTCACTGCTCAGTTGGAAAGTGAGCAAGAGAAGTACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | TCAGCACTGAGAGTTTCAGCCCTTTCTCTATCCTTGCTGACAAGGTaGTCTCTTTCTGTTTCAAGTAGCTGGCATTTAACAGTCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SALRVSALSLSLLTR*SLSVSSSWHLTVRS Trigger: AGACCTGACTGTTAAATGCCAGCTACTTGAAACAGAAAGAGACAACCTTGTCAGCAAGGATAGAGAAAGGGCTGAAACTCTCAGTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | AGGATCTGCATCTCAGCACTGAGAGTTTCAGCCCTTTCTCTATCCTaGCTGACAAGGTTGTCTCTTTCTGTTTCAAGTAGCTGGCATTTA | + |
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Preference number: 6 (lower is better) Translates to: RICISALRVSALSLS*LTRLSLSVSSSWHL Trigger: TAAATGCCAGCTACTTGAAACAGAAAGAGACAACCTTGTCAGCAAGGATAGAGAAAGGGCTGAAACTCTCAGTGCTGAGATGCAGATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 72 bp | CATTATACTTCTCTTGCACACTTTCCAACTGAGCAGTaGCGTCCCTCAGACTCTGTGCTGTGTCATTATACT | + |
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Preference number: 6 (lower is better) Translates to: HYTSLAHFPTEQ*RPSDSVLCHYT Trigger: AGTATAATGACACAGCACAGAGTCTGAGGGACGTCACTGCTCAGTTGGAAAGTGTGCAAGAGAAGTATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 72 bp | ATGCATGACAAAAAGCCTTGGAAGGGTCAAAGTGTCTaGTGCCCAGAGCTTTATCTAATTCTCCCTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: MHDKKPWKGQSV*CPELYLILPEV Trigger: GACTTCAGGGAGAATTAGATAAAGCTCTGGGCATCAGACACTTTGACCCTTCCAAGGCTTTTTGTCATGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CCA 72 bp | GTGCTGTGTCATTATACTTCTCTTGTGCAATCAAGATaGCTTGGGCGTGAGCAGCAATATGTTTCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VLCHYTSLVQSR*LGREQQYVSPV Trigger: AACTGGAGAAACATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | ATCTCAGCACTGAGAGTTTCAGCCCTTTCTCTATCCTaGCTGACAAGGTTGTCTCTTTCTGTTTCAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ISALRVSALSLS*LTRLSLSVSSS Trigger: GCTACTTGAAACAGAAAGAGACAACCTTGTCAGCAAGGATAGAGAAAGGGCTGAAACTCTCAGTGCTGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | ACTCTGTGCTGTGTCATTATACTTCTCTTGTGCAATCAAGATGGCTaGGGCGTGAGCAGCAATATGTTTCTCCAGTTCAACTTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TLCCVIILLLCNQDG*GVSSNMFLQFNFFL Trigger: GAGAAAGAAGTTGAACTGGAGAAACATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACAGCACAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | TGTGTCATTATACTTCTCTTGTGCAATCAAGATGGCTaGGGCGTGAGCAGCAATATGTTTCTCCAGTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: CVIILLLCNQDG*GVSSNMFLQFN Trigger: GTTGAACTGGAGAAACATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAATGACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS TCA 72 bp | TTATACTTCTCTTGTGCAATCAAGATGGCTTGGGCGTaGGCAGCAATATGTTTCTCCAGTTCAACTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LYFSCAIKMAWA*AAICFSSSTSF Trigger: GAAAGAAGTTGAACTGGAGAAACATATTGCTGCTCACGCCCAAGCCATCTTGATTGCACAAGAGAAGTATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | AGAGTTTCAGCCCTTTCTCTATCCTTGCTGACAAGGTaGTCTCTTTCTGTTTCAAGTAGCTGGCATTTAACA | + |
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Preference number: 6 (lower is better) Translates to: RVSALSLSLLTR*SLSVSSSWHLT Trigger: TGTTAAATGCCAGCTACTTGAAACAGAAAGAGACAACCTTGTCAGCAAGGATAGAGAAAGGGCTGAAACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | TCTGTTCTGCAAATCTTGAACCATCCTTGCATATTCTaGATTTGTGCTCTCAGCTGTCAATATCTGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SVLQILNHPCIF*ICALSCQYLLL Trigger: CAACAGCAGATATTGACAGCTGAGAGCACAAATCAAGAATATGCAAGGATGGTTCAAGATTTGCAGAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | TTGATCTGTTCTGCAAATCTTGAACCATCCTTGCATATTCTTGATTaGTGCTCTCAGCTGTCAATATCTGCTGTTGAACATCTTCTACAC | + |
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Preference number: 6 (lower is better) Translates to: LICSANLEPSLHILD*CSQLSISAVEHLLH Trigger: GTGTAGAAGATGTTCAACAGCAGATATTGACAGCTGAGAGCACAAATCAAGAATATGCAAGGATGGTTCAAGATTTGCAGAACAGATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS GCA 72 bp | GCAAATCTTGAACCATCCTTGCATATTCTTGATTTGTaGTCTCAGCTGTCAATATCTGCTGTTGAACATCTT | + |
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Preference number: 6 (lower is better) Translates to: ANLEPSLHILDL*SQLSISAVEHL Trigger: AAGATGTTCAACAGCAGATATTGACAGCTGAGAGCACAAATCAAGAATATGCAAGGATGGTTCAAGATTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CCA 72 bp | TTGCTGACAAGGTTGTCTCTTTCTGTTTCAAGTAGCTaGCATTTAACAGTCAGGTCTTCTATTTGCTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLTRLSLSVSSS*HLTVRSSICLE Trigger: TTCTAAGCAAATAGAAGACCTGACTGTTAAATGCCAGCTACTTGAAACAGAAAGAGACAACCTTGTCAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 72 bp | TCTGCAAATCTTGAACCATCCTTGCATATTCTTGATTaGTGCTCTCAGCTGTCAATATCTGCTGTTGAACAT | + |
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Preference number: 6 (lower is better) Translates to: SANLEPSLHILD*CSQLSISAVEH Trigger: ATGTTCAACAGCAGATATTGACAGCTGAGAGCACAAATCAAGAATATGCAAGGATGGTTCAAGATTTGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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| CDS CAA 90 bp | CTTCTTCTTTTAAGGTTGATCTGTTCTGCAAATCTTGAACCATCCTaGCATATTCTTGATTTGTGCTCTCAGCTGTCAATATCTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LLLLRLICSANLEPS*HILDLCSQLSISAV Trigger: AACAGCAGATATTGACAGCTGAGAGCACAAATCAAGAATATGCAAGGATGGTTCAAGATTTGCAGAACAGATCAACCTTAAAAGAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020579.9 |
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