Pregenerated sensors for HMGXB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034518Ensembl transcript IDs: ENSMUST00000041759.14, ENSMUST00000109940.2, ENSMUST00000145919.2
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGAGGCAGGGCCAGGTATCAGCCCGTGCTCCCGAGCAGTACCGTaGTCTCTGGCAGAGCTTCTCTTGGTCCGGGAGTGCCGCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LEAGPGISPCSRAVP*SLAELLLVRECRFS Trigger: GGAGAAGCGGCACTCCCGGACCAAGAGAAGCTCTGCCAGAGAGCACGGTACTGCTCGGGAGCACGGGCTGATACCTGGCCCTGCCTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | GCCCGTGCTCCCGAGCAGTACCGTGCTCTCTGGCAGAGCTTCTCTTaGTCCGGGAGTGCCGCTTCTCCTTGTGTCTGTCTTTGTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: ARAPEQYRALWQSFS*SGSAASPCVCLCPS Trigger: AGAAGGACAAAGACAGACACAAGGAGAAGCGGCACTCCCGGACCAAGAGAAGCTCTGCCAGAGAGCACGGTACTGCTCGGGAGCACGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | CAGCCTTCTGGGCCAGGAGAGGAGTGTGAGTCTGAGGATGACTTGTaGTTCTTCCGGGCCGTTTTCAGGAGGCTCTGTAGCTCGTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: QPSGPGEECESEDDL*FFRAVFRRLCSSCP Trigger: AGGGCACGAGCTACAGAGCCTCCTGAAAACGGCCCGGAAGAAGCACAAGTCATCCTCAGACTCACACTCCTCTCCTGGCCCAGAAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | GCTGGAGGATTTCTCCCCTGCCTTCTTAGAGGACTTGGCACCCGCTaGCAGTGGGGAGGTGATAGCTTTCAACAGGTCCATTGCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: AGGFLPCLLRGLGTR*QWGGDSFQQVHCCV Trigger: GACACAGCAATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | GCTCTCCACTGCTGCCATTGCCCTTCTTCTTGTGGTGCTCCTTCCTaGTCTCTGGATGGCTTGAAGAGCTGGAGGATTTCTCCCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: ALHCCHCPSSCGAPS*SLDGLKSWRISPLP Trigger: AGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | TGTGGGCATTGCTGTCATCCAGGGAGAGCTCTCCACTGCTGCCATTaGCCTTCTTCTTGTGGTGCTCCTTCCTGCTCTCTGGATGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: CGHCCHPGRALHCCH*PSSCGAPSCSLDGL Trigger: CAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | GGATTTCTCCCCTGCCTTCTTAGAGGACTTGGCACCCGCTGCCAGTaGGGAGGTGATAGCTTTCAACAGGTCCATTGCTGTGTCCGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GFLPCLLRGLGTRCQ*GGDSFQQVHCCVRR Trigger: TCTCCGGACACAGCAATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | TCCAGGGAGAGCTCTCCACTGCTGCCATTGCCCTTCTTCTTGTGGTaGTCCTTCCTGCTCTCTGGATGGCTTGAAGAGCTGGAGGATTTC | + |
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Preference number: 1 (lower is better) Translates to: SRESSPLLPLPFFLW*SFLLSGWLEELEDF Trigger: GAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | GACTTGTGCTTCTTCCGGGCCGTTTTCAGGAGGCTCTGTAGCTCGTaGCCTAGGAGTAAAGCACCTTGCTCGTCCCGAGCTAGTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: DLCFFRAVFRRLCSS*PRSKAPCSSRASFF Trigger: GAAGAAACTAGCTCGGGACGAGCAAGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCTCCTGAAAACGGCCCGGAAGAAGCACAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | TCATCCAGGGAGAGCTCTCCACTGCTGCCATTGCCCTTCTTCTTGTaGTGCTCCTTCCTGCTCTCTGGATGGCTTGAAGAGCTGGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SSRESSPLLPLPFFL*CSFLLSGWLEELED Trigger: ATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | GGCACCCGCTGCCAGTGGGGAGGTGATAGCTTTCAACAGGTCCATTaGTGTGTCCGGAGACTGTGGGCTAGACTTCTTCTTTTTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: GTRCQWGGDSFQQVH*CVRRLWARLLLFLL Trigger: CAGAAGAAAAAGAAGAAGTCTAGCCCACAGTCTCCGGACACAGCAATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | TGGATTTGTGGGCATTGCTGTCATCCAGGGAGAGCTCTCCACTGCTaGCATTGCCCTTCTTCTTGTGGTGCTCCTTCCTGCTCTCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: WICGHCCHPGRALHC*HCPSSCGAPSCSLD Trigger: ATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACAAATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | GTTTTCAGGAGGCTCTGTAGCTCGTGCCCTAGGAGTAAAGCACCTTaGTCGTCCCGAGCTAGTTTCTTCGAGGGCTTCTTCAGCGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: VFRRLCSSCPRSKAP*SSRASFFEGFFSEA Trigger: AGCTTCGCTGAAGAAGCCCTCGAAGAAACTAGCTCGGGACGAGCAAGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCTCCTGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | CTGCCATTGCCCTTCTTCTTGTGGTGCTCCTTCCTGCTCTCTGGATaGCTTGAAGAGCTGGAGGATTTCTCCCCTGCCTTCTTAGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LPLPFFLWCSFLLSG*LEELEDFSPAFLED Trigger: GTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR TCA 90 bp | ATTGCCCTTCTTCTTGTGGTGCTCCTTCCTGCTCTCTGGATGGCTTaGAGAGCTGGAGGATTTCTCCCCTGCCTTCTTAGAGGACTTGGC | + |
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Preference number: 1 (lower is better) Translates to: IALLLVVLLPALWMA*RAGGFLPCLLRGLG Trigger: GCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | TTTTGGATTTGTGGGCATTGCTGTCATCCAGGGAGAGCTCTCCACTaGTGCCATTGCCCTTCTTCTTGTGGTGCTCCTTCCTGCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: FWICGHCCHPGRALH*CHCPSSCGAPSCSL Trigger: CAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACAAATCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | GGGCAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTaGCCTCTCCTTGATACCATTTCTCACAGGAAACTTCTGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: GQWRTGCFLYHTCLP*PLLDTISHRKLLQG Trigger: ACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR TCA 90 bp | TGTGTGGAATGCAGAGCACAATGTACCCACCAGGGGAACCAGAGCTaGACCAAGAACCACCAAACAGCTAAGCAGCAGAATCCTCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: CVECRAQCTHQGNQS*TKNHQTAKQQNPQD Trigger: ATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTACATTGTGCTCTGCATTCCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR GCA 90 bp | CTGTGTTCACATAGAGTGGCTTCATCTTTTTGGATTTGTGGGCATTaGTGTCATCCAGGGAGAGCTCTCCACTGCTGCCATTGCCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LCSHRVASSFWICGH*CHPGRALHCCHCPS Trigger: AGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACAAATCCAAAAAGATGAAGCCACTCTATGTGAACACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | GCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTGCTaGCCAGACAAGCAGGTTCAACAGGTGGCACCAACAGCTTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: ASGRWQLWFLYTKPC*PDKQVQQVAPTALV Trigger: AACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | GAAGAGTCAGTGTCTCTGTGTTCACATAGAGTGGCTTCATCTTTTTaGATTTGTGGGCATTGCTGTCATCCAGGGAGAGCTCTCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: EESVSLCSHRVASSF*ICGHCCHPGRALHC Trigger: GCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACAAATCCAAAAAGATGAAGCCACTCTATGTGAACACAGAGACACTGACTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | GCCATCTGGCTCACGAAGAGTCAGTGTCTCTGTGTTCACATAGAGTaGCTTCATCTTTTTGGATTTGTGGGCATTGCTGTCATCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: AIWLTKSQCLCVHIE*LHLFGFVGIAVIQG Trigger: TCCCTGGATGACAGCAATGCCCACAAATCCAAAAAGATGAAGCCACTCTATGTGAACACAGAGACACTGACTCTTCGTGAGCCAGATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | CTTGCTGGCCAGACAAGCAGGTTCAACAGGTGGCACCAACAGCTTTaGTTTCTGCAAGGTATTTATTTCTCTGCTGCCAAGAATCACATA | + |
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Preference number: 1 (lower is better) Translates to: LAGQTSRFNRWHQQL*FLQGIYFSAAKNHI Trigger: TATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR TCA 90 bp | TTCCTTTCCCTATTTCTCAGATTAAATCTCAAAACTGCTCTGAGCTaGCACAGTCCTGTGAGAAGCTTAGCTGTGACAGCAGTCGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: FLSLFLRLNLKTALS*HSPVRSLAVTAVGL Trigger: TAGCCCGACTGCTGTCACAGCTAAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGAAATAGGGAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | TTTTATACACCAAGCCTTGCTGGCCAGACAAGCAGGTTCAACAGGTaGCACCAACAGCTTTGGTTTCTGCAAGGTATTTATTTCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: FYTPSLAGQTSRFNR*HQQLWFLQGIYFSA Trigger: AGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR CCA 90 bp | CTTTCATGGAACCTTCTGCGCTGGATGCTTTTCTCTTCACAGTTGTaGCTTCAGCTTTGTTCTGTTTGTGCTGCAGATACTGAGCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: LSWNLLRWMLFSSQL*LQLCSVCAADTEPF Trigger: AAAAGGCTCAGTATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCATGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR TCA 90 bp | GTCGAAATGTCTTGTGTATCACAAATGAAGACTGTTCTTCTATGCTaGATCCTCCAAAATACCAGCCCTCCACCTCTCTCCTCCTTCACA | + |
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Preference number: 1 (lower is better) Translates to: VEMSCVSQMKTVLLC*ILQNTSPPPLSSFT Trigger: TGTGAAGGAGGAGAGAGGTGGAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTTCATTTGTGATACACAAGACATTTCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR TCA 90 bp | TTCACAGTTGTGGCTTCAGCTTTGTTCTGTTTGTGCTGCAGATACTaGGCCTTTTGCTTCCAGATCAGTTTGTCTTTTTCTGGCAACTGC | + |
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Preference number: 1 (lower is better) Translates to: FTVVASALFCLCCRY*AFCFQISLSFSGNC Trigger: GCAGTTGCCAGAAAAAGACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR TCA 90 bp | CTCTCCTTGATACCATTTCTCACAGGAAACTTCTGCAGGGTCAAATaGGGTTCTGACATGTTAACTCAAATGGAAATTTCTGCTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LSLIPFLTGNFCRVK*GSDMLTQMEISALL Trigger: AAGCAGAGCAGAAATTTCCATTTGAGTTAACATGTCAGAACCTCATTTGACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR TCA 90 bp | TCTTCTGTGATGATTCCAAAGTCGAAATGTCTTGTGTATCACAAATaGAGACTGTTCTTCTATGCTGAATCCTCCAAAATACCAGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SSVMIPKSKCLVYHK*RLFFYAESSKIPAL Trigger: GAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTTCATTTGTGATACACAAGACATTTCGACTTTGGAATCATCACAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CAA 90 bp | CCACAGCCTTCTGGGCCAGGAGAGGAGTGTGAGTCTGAGGATGACTaGTGCTTCTTCCGGGCCGTTTTCAGGAGGCTCTGTAGCTCGTGC | + |
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Preference number: 2 (lower is better) Translates to: PQPSGPGEECESEDD*CFFRAVFRRLCSSC Trigger: GCACGAGCTACAGAGCCTCCTGAAAACGGCCCGGAAGAAGCACAAGTCATCCTCAGACTCACACTCCTCTCCTGGCCCAGAAGGCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGATAGGACTTGGCACCCGCTaGCAGTGGGGAGGTGATAGC | + |
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Preference number: 2 (lower is better) Translates to: GGLAASSTTHVFPGLSLIGLGTR*QWGGDS Trigger: GCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCC...TATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTCAGGAAGTGGCAGGGTaGGGACACTGGAGGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SNPGALSYLLSNGEAGLGQEVAG*GHWRQG Trigger: GCCCTGCCTCCAGTGTCCCCACCCTGCCACTTCCTG...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CAA 90 bp | TGGCTTGAAGAGCTGGAGGATTTCTCCCCTGCCTTCTTAGAGGACTaGGCACCCGCTGCCAGTGGGGAGGTGATAGCTTTCAACAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: WLEELEDFSPAFLED*APAASGEVIAFNRS Trigger: GGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGATAGGCACCCGCTGCCAGTaGGGAGGTGATAGCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: GGLAASSTTHVFPGLSLIGTRCQ*GGDSFQ Trigger: TTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCC...TATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CAA 90 bp | TTGTGGGCATTGCTGTCATCCAGGGAGAGCTCTCCACTGCTGCCATaGCCCTTCTTCTTGTGGTGCTCCTTCCTGCTCTCTGGATGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LWALLSSRESSPLLP*PFFLWCSFLLSGWL Trigger: AAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTGGAGCACTCAGCTAGGAGGATTTCTCCCCTaGCTTCTTAGAGGACTTGGC | + |
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Preference number: 2 (lower is better) Translates to: AGKGISHRVPKQPWSTQLGGFLP*LLRGLG Trigger: GCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCC...TAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTACTGTGATGCTGCCGGGAGAGCTCTCCACTaGTGCCATTGCCCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLGCQLATWSPKVYCDAAGRALH*CHCPSS Trigger: AGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCC...GGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR CAA 90 bp | GATTCGGACTCTACTAGAATTGGGTCAAGCCCTGTGATGTCGAGATaGGCACTGTGGGGTTCTGGAAGCTGGGAGACGTCAGACCCACAG | + |
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Preference number: 2 (lower is better) Translates to: DSDSTRIGSSPVMSR*ALWGSGSWETSDPQ Trigger: CTGTGGGTCTGACGTCTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGACATCACAGGGCTTGACCCAATTCTAGTAGAGTCCGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGTCTGTATGCTCCACATaGTCCTGCTGGTGGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: NGGLAASSTTHVFPGLSLSVCST*SCWWRL Trigger: AAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGA...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTACACCAAGCCTTGCTaGCCAGACAAGCAGGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: KGNGGLAASSTTHVFPGLYTKPC*PDKQVQ Trigger: TTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTA...GAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTGGAGCACTCAGCTATACACCAAGCCTTGCTaGCCAGACAAGCAGGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: AGKGISHRVPKQPWSTQLYTKPC*PDKQVQ Trigger: TTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTA...TAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTTCGAGATTGGCACTGTaGGGTTCTGGAAGCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SNPGALSYLLSNGEAGLGSRLAL*GSGSWE Trigger: CTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGA...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTCTCCCAGCAACTGGAGATGAGCAGCGACATCAATGGGCTCTGTTTCAGGATGGGGAAGCAGGTCTaGGTCTTTGGGAATAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GLSQQLEMSSDINGLCFRMGKQV*VFGNKG Trigger: TCCCTTATTCCCAAAGACCCAGACCTGCTTCCCCAT...CCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACGTTCAGGTAGTTGTGTaGTCAGGCATGCCAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: NSAWFWQGRESLTEFPSNVQVVV*SGMPEG Trigger: GCCCTCTGGCATGCCTGACCACACAACTACCTGAAC...GTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGTTGTGCTGCAGATACTaGGCCTTTTGCTTCCAGATC | + |
|
Preference number: 2 (lower is better) Translates to: NGGLAASSTTHVFPGLSLLCCRY*AFCFQI Trigger: GATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAA...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTGGAGCACTCAGCTAAAGTTTGTAGTCAGCTaGCCTCCTCCCAAGATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AGKGISHRVPKQPWSTQLKFVVS*PPPKIF Trigger: AAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTT...TAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GTACCCACCAGGGGAACCAGAGCTGAACCAAGAACCACCAAACAGCTAAGCAGCAGCAGGTTCAACAGGTaGCACCAACAGCTTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VPTRGTRAEPRTTKQLSSSRFNR*HQQLWF Trigger: AAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCT...GCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTGGAGCACTCAGCTAATCCTCAGGATTTGTTaGGCAACCAATGCTGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: AGKGISHRVPKQPWSTQLILRIC*ATNAAS Trigger: ACTAGCAGCATTGGTTGCCCAACAAATCCTGAGGAT...TAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGATAAACTCAGCTTGGTTTTaGCAGGGAAGGGAATCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GGLAASSTTHVFPGLSLINSAWF*QGRESL Trigger: GAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTT...TATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTTTCCTGCTCTCTGGATaGCTTGAAGAGCTGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SNPGALSYLLSNGEAGLGFLLSG*LEELED Trigger: ATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAA...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCGGCACTGTGGGGTTCTaGAAGCTGGGAGACGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQPMLLVEDGSFGFYTPSGTVGF*KLGDVR Trigger: TCTGACGTCTCCCAGCTTCCAGAACCCCACAGTGCC...GCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCAAGCCCTGTGATGTCGAGATTGGCACTGTGGGGTTCTGGAAGCTGGGAGACACTGTTCTTCTATGCTaGATCCTCCAAAATACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VKPCDVEIGTVGFWKLGDTVLLC*ILQNTS Trigger: GCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGT...GTCTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGACATCACAGGGCTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAGGATTTCTCCCCTGCCTTCTTAGAGGACTTGGCACCCGCTGCCAGTGGGCTTGTGTATCACAAATaGAGACTGTTCTTCTATGCT | + |
|
Preference number: 2 (lower is better) Translates to: LEDFSPAFLEDLAPAASGLVYHK*RLFFYA Trigger: AGCATAGAAGAACAGTCTTCATTTGTGATACACAAG...CCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGATAAATGACAAATCTGTATaGTCCACATGCTCCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GGLAASSTTHVFPGLSLINDKSV*STCSCW Trigger: CCAGCAGGAGCATGTGGAGCATACAGATTTGTCATT...TATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTGCTCAGACACTGCCACCATaGCCTCTGTCTCCTGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PMLLVEDGSFGFYTPSLAQTLPP*PLSPVG Trigger: GCCTACAGGAGACAGAGGGCATGGTGGCAGTGTCTG...AGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACTCTCCCAGCAACTGGAGATGAGCAGCGACATCAATGGGCTCTGTTTCAGGGGTCAGTGGAGGGTCTaGAACAGTCATCTATACATA | + |
|
Preference number: 2 (lower is better) Translates to: GLSQQLEMSSDINGLCFRGQWRV*NSHLYI Trigger: TATGTATAGATGACTGTTCCAGACCCTCCACTGACC...CCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTAAGTTTGTAGTCAGCTaGCCTCCTCCCAAGATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: QWRTGCFLYHTCLPWPLLKFVVS*PPPKIF Trigger: AAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTT...AAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGATCCTCAGGATTTGTTaGGCAACCAATGCTGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: NGGLAASSTTHVFPGLSLILRIC*ATNAAS Trigger: ACTAGCAGCATTGGTTGCCCAACAAATCCTGAGGAT...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTATTGCCCTTCTTCTTGTaGTGCTCCTTCCTGCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLLPFFL*CSFLLS Trigger: AGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAA...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CAA 90 bp | CCCAGGCGTCTTGGAAGTCACAGTCCAGGCATAATGTATGCAATGTaGTCCAGCGTGTTTGACAAGACCTGTTTAGGACAGCCGTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PRRLGSHSPGIMYAM*SSVFDKTCLGQPFS Trigger: ACTGAACGGCTGTCCTAAACAGGTCTTGTCAAACACGCTGGACAACATTGCATACATTATGCCTGGACTGTGACTTCCAAGACGCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTAATGACAAATCTGTATaGTCCACATGCTCCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SNPGALSYLLSNGEAGLGNDKSV*STCSCW Trigger: CCAGCAGGAGCATGTGGAGCATACAGATTTGTCATT...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTGGTCAGTGGAGGGTCTaGAACAGTCATCTATACATA | + |
|
Preference number: 2 (lower is better) Translates to: SNPGALSYLLSNGEAGLGGQWRV*NSHLYI Trigger: TATGTATAGATGACTGTTCCAGACCCTCCACTGACC...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTACACCCAGAGGTCAGTaGAGGGTCTGGAACAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TTKQLSSRILRICWATNATPRGQ*RVWNSH Trigger: ATGACTGTTCCAGACCCTCCACTGACCTCTGGGTGT...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACTCTCCCAGCAACTGGAGATGAGCAGCGACATCAATGGGCTCTGTTTCAGGATCTTTTTGGATTTGTaGGCATTGCTGTCATCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLSQQLEMSSDINGLCFRIFLDL*ALLSSR Trigger: CCTGGATGACAGCAATGCCCACAAATCCAAAAAGAT...CCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTGGAGCACTCAGCTAACAGACATTAAGAAATaGCAAATCTGTATGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: AGKGISHRVPKQPWSTQLTDIKK*QICMLH Trigger: GTGGAGCATACAGATTTGTCATTTCTTAATGTCTGT...TAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTACTGTGATGCTGCCAACAGCAAGAAGGCCTaGATCCAAAATTTTTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLGCQLATWSPKVYCDAANSKKA*IQNFSS Trigger: AGAGGAAAAATTTTGGATTCAGGCCTTCTTGCTGTT...GGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCCCCACCCAGGTTACTCCATGTCCAAAAGTTTGTAGTCAGCTGGCCTCCCCTTTGGTGAGAGAATaGGTTTCATCTTTAAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: HLPTQVTPCPKVCSQLASPLVRE*VSSLSH Trigger: ATGGCTTAAAGATGAAACTCATTCTCTCACCAAAGG...GGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGGGGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCTCCACTGCTGCCATTaGCCTTCTTCTTGTGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKLHCCH*PSSCGA Trigger: AGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAG...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | GAACCTTCTGCGCTGGATGCTTTTCTCTTCACAGTTGTGGCTTCAGCTTTGTTCAGAGCTCTCCACTGCTaGCATTGCCCTTCTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: EPSALDAFLFTVVASALFRALHC*HCPSSC Trigger: ACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCT...GAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGACACCCAGAGGTCAGTaGAGGGTCTGGAACAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKTPRGQ*RVWNSH Trigger: ATGACTGTTCCAGACCCTCCACTGACCTCTGGGTGT...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTAAAGTTTGTAGTCAGCTaGCCTCCTCCCAAGATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLKFVVS*PPPKIF Trigger: AAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTT...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTGCTGCTAGTGGAAGATaGCAGCTTTGGTTTTTATAC | + |
|
Preference number: 2 (lower is better) Translates to: SNPGALSYLLSNGEAGLGAASGR*QLWFLY Trigger: GTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGC...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTGTTCCCAAGCAACCCTaGAGCACTCAGCTATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TTKQLSSRILRICWATNAVPKQP*STQLSS Trigger: AGAAGATAGCTGAGTGCTCCAGGGTTGCTTGGGAAC...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGGATGGCTTGAAGAGCTaGAGGATTTCTCCCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKDGLKS*RISPLP Trigger: AGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATC...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CAA 90 bp | CCTTGCTGGCCAGACAAGCAGGTTCAACAGGTGGCACCAACAGCTTaGGTTTCTGCAAGGTATTTATTTCTCTGCTGCCAAGAATCACAT | + |
|
Preference number: 2 (lower is better) Translates to: PCWPDKQVQQVAPTA*VSARYLFLCCQESH Trigger: ATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACTCTCCCAGCAACTGGAGATGAGCAGCGACATCAATGGGCTCTGTTTCAGGACAGACATTAAGAAATaGCAAATCTGTATGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GLSQQLEMSSDINGLCFRTDIKK*QICMLH Trigger: GTGGAGCATACAGATTTGTCATTTCTTAATGTCTGT...CCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGTCCCTGGCCTCTCCTTaGTACCATTTCTCACAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKSLASP*YHFSQE Trigger: TTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGA...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTATCCCTTCTCCTTTGGTaGGAGAATGAGTTTCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLSLLLW*ENEFHL Trigger: AAGATGAAACTCATTCTCTCACCAAAGGAGAAGGGA...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGTTTCAACAGGTCCATTaGTGTGTCCGGAGACTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKFQQVH*CVRRLW Trigger: CCACAGTCTCCGGACACAGCAATGGACCTGTTGAAA...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTAGCAGGTTCAACAGGTaGCACCAACAGCTTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: TTKQLSSRILRICWATNASRFNR*HQQLWF Trigger: AAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCT...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTAGGAAGATGGCAGCTTTaGTTTTTATACACCAAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLGRWQL*FLYTKP Trigger: AGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCC...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGTGCCAGCTGGCTACATaGTCCCCAAAGGTTTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKCQLAT*SPKVYC Trigger: ACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCA...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | CAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTAACAGCTTTGGTTTCTaGAAGGTATTTATTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QWRTGCFLYHTCLPWPLLNSFGF*KVFISL Trigger: CAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTT...AAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | GTACCCACCAGGGGAACCAGAGCTGAACCAAGAACCACCAAACAGCTAAGCAGCAACAGCTTTGGTTTCTaGAAGGTATTTATTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VPTRGTRAEPRTTKQLSSNSFGF*KVFISL Trigger: CAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTT...GCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTACTGTGATGCTGCCAACAGCTTTGGTTTCTaGAAGGTATTTATTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLGCQLATWSPKVYCDAANSFGF*KVFISL Trigger: CAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTT...GGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTTCTGAGGATGACTTGTaGTTCTTCCGGGCCGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLSEDDL*FFRAVF Trigger: GAAAACGGCCCGGAAGAAGCACAAGTCATCCTCAGA...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTATTAACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCAGGTCAGTGGAGGGTCTaGAACAGTCATCTATACATA | + |
|
Preference number: 2 (lower is better) Translates to: VINSAWFWQGRESLTEFPGQWRV*NSHLYI Trigger: TATGTATAGATGACTGTTCCAGACCCTCCACTGACC...TGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTATTAACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCACCCAAAATCTATACCTaGATGGTCAGCCACAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: VINSAWFWQGRESLTEFPPKIYT*MVSHNG Trigger: ACCATTGTGGCTGACCATCCAGGTATAGATTTTGGG...TGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGATCCTCAGGATTTGTTaGGCAACCAATGCTGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKILRIC*ATNAAS Trigger: ACTAGCAGCATTGGTTGCCCAACAAATCCTGAGGAT...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTGTTATTAACTCAGCTTaGTTTTGGCAGGGAAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TTKQLSSRILRICWATNAVINSA*FWQGRE Trigger: TTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTGGTGGGGACTTCTTTTaGGGTGACAGTACTCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: SQIKSQNCSELTQSCEKLGGDFF*GDSTPT Trigger: TGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACC...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTATTAAATCTCAAAACTaGTCTGAGCTGACACAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TTKQLSSRILRICWATNAIKSQN*SELTQS Trigger: GGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAAT...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTTGGCACCAACAGCTTTaGTTTCTGCAAGGTATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: TTKQLSSRILRICWATNAWHQQL*FLQGIY Trigger: ATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCA...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTATTAACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCATGGCACCAACAGCTTTaGTTTCTGCAAGGTATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: VINSAWFWQGRESLTEFPWHQQL*FLQGIY Trigger: ATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCA...TGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGGGTCAAATGAGGTTCTaGCATGTTAACTCAAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKGQMRF*HVNSNG Trigger: TCCATTTGAGTTAACATGTCAGAACCTCATTTGACC...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTTACAATAAAACTGGAGACACAGGTATCTCTTTAGTAGGAATTGGAATGAGTGCTCTCTGGATGGCTTaGAGAGCTGGAGGATTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GYNKTGDTGISLVGIGMSALWMA*RAGGFL Trigger: GAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGC...ACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCCCTCTTCCACTGAGCTaGTTCCCTTCTCCTTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCPLPLS*FPSPLV Trigger: CACCAAAGGAGAAGGGAAGCAGCTCAGTGGAAGAGG...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGCCTGAATCCAAAATTTTTCCTCTAATAGTACCAAATACCACAAGGTACAGGCTCTGTAGCTCGTaGCCTAGGAGTAAAGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: RRPESKIFPLIVPNTTRYRLCSS*PRSKAP Trigger: AGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCT...GTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGTGGCACCAACAGCTTTaGTTTCTGCAAGGTATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKWHQQL*FLQGIY Trigger: ATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCA...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTAAAATCTATACCTGGATaGTCAGCCACAATGGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: EMTNLYAPHAPAGGGLLLKSIPG*SATMVT Trigger: GGTAACCATTGTGGCTGACCATCCAGGTATAGATTT...TAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGACAGACATTAAGAAATaGCAAATCTGTATGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: WATNAASGRWQLWFLYTKTDIKK*QICMLH Trigger: GTGGAGCATACAGATTTGTCATTTCTTAATGTCTGT...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTAATTAAATCTCAAAACTaGTCTGAGCTGACACAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: EMTNLYAPHAPAGGGLLLIKSQN*SELTQS Trigger: GGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAAT...TAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGCTGGCCTCCTCCCAAGATCTTTACTACATTTCTGATTATAAGACAGGTGTGGCTTCATCTTTTTaGATTTGTGGGCATTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SQLASSQDLYYISDYKTGVASSF*ICGHCC Trigger: ACAGCAATGCCCACAAATCCAAAAAGATGAAGCCAC...ACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGCCTGAATCCAAAATTTTTCCTCTAATAGTACCAAATACCACAAGGTACTTATACACCAAGCCTTaGTGGCCAGACAAGCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RRPESKIFPLIVPNTTRYLYTKP*WPDKQV Trigger: AACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAA...GTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCAGCAGGTTCAACAGGTaGCACCAACAGCTTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCSRFNR*HQQLWF Trigger: AAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCT...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTACAATAAAACTGGAGACACAGGTATCTCTTTAGTAGGAATTGGAATGAGTTGTGTCCGGAGACTGTaGGCTAGACTTCTTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: GYNKTGDTGISLVGIGMSCVRRL*ARLLLF Trigger: AAAAAGAAGAAGTCTAGCCCACAGTCTCCGGACACA...ACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCCTGAATCCAAAATTTTTCCTCTAATAGTACCAAATACCACAAGGTACGGAAGATGGCAGCTTTaGTTTTTATACACCAAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RRPESKIFPLIVPNTTRYGRWQL*FLYTKP Trigger: AGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCC...GTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTACAATAAAACTGGAGACACAGGTATCTCTTTAGTAGGAATTGGAATGAGTGCTGCTAGTGGAAGATaGCAGCTTTGGTTTTTATAC | + |
|
Preference number: 2 (lower is better) Translates to: GYNKTGDTGISLVGIGMSAASGR*QLWFLY Trigger: GTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGC...ACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTTGTGTTCACATAGAGTaGCTTCATCTTTTTGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: SQIKSQNCSELTQSCEKLCVHIE*LHLFGF Trigger: AAATCCAAAAAGATGAAGCCACTCTATGTGAACACA...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTTACAATAAAACTGGAGACACAGGTATCTCTTTAGTAGGAATTGGAATGAGTACTTCTTCTTCTTCTTaGTCTCCCTGTAAGAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GYNKTGDTGISLVGIGMSTSSSS*SPCKSH Trigger: ATGACTCTTACAGGGAGATCAAGAAGAAGAAGAAGT...ACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CAA 90 bp | ATTAGGAATGGTGACATTCCTTTCTATTTCACTTTCCTAACATTATaGAGGGCCATGAAGTTCCTTTCTGAGTCACAACACCTTAACATA | + |
|
Preference number: 2 (lower is better) Translates to: IRNGDIPFYFTFLTL*RAMKFLSESQHLNI Trigger: TATGTTAAGGTGTTGTGACTCAGAAAGGAACTTCATGGCCCTCAATAATGTTAGGAAAGTGAAATAGAAAGGAATGTCACCATTCCTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | GTGGGGACACTGGAGGCAGGGCCAGGTATCAGCCCGTaGTCCCGAGCAGTACCGTGCTCTCTGGCAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VGTLEAGPGISP*SRAVPCSLAEL Trigger: AAGCTCTGCCAGAGAGCACGGTACTGCTCGGGAGCACGGGCTGATACCTGGCCCTGCCTCCAGTGTCCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | CCCGAGCAGTACCGTGCTCTCTGGCAGAGCTTCTCTTaGTCCGGGAGTGCCGCTTCTCCTTGTGTCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PEQYRALWQSFS*SGSAASPCVCL Trigger: AAGACAGACACAAGGAGAAGCGGCACTCCCGGACCAAGAGAAGCTCTGCCAGAGAGCACGGTACTGCTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | GGGCATTGCTGTCATCCAGGGAGAGCTCTCCACTGCTaGCATTGCCCTTCTTCTTGTGGTGCTCCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GHCCHPGRALHC*HCPSSCGAPSC Trigger: GCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | TTCTTCCGGGCCGTTTTCAGGAGGCTCTGTAGCTCGTaGCCTAGGAGTAAAGCACCTTGCTCGTCCCGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FFRAVFRRLCSS*PRSKAPCSSRA Trigger: AGCTCGGGACGAGCAAGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCTCCTGAAAACGGCCCGGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTGGAGCACTCAGCTATCTCCACTGCTGCCATaGCCCTTCTTCTTGTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AGKGISHRVPKQPWSTQLSPLLP*PFFLWC Trigger: GCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGA...TAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | TGTGGGCATTGCTGTCATCCAGGGAGAGCTCTCCACTaGTGCCATTGCCCTTCTTCTTGTGGTGCTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CGHCCHPGRALH*CHCPSSCGAPS Trigger: GGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | CCGTGCTCTCTGGCAGAGCTTCTCTTGGTCCGGGAGTaGCGCTTCTCCTTGTGTCTGTCTTTGTCCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PCSLAELLLVRE*RFSLCLSLSFF Trigger: GAAGAAGGACAAAGACAGACACAAGGAGAAGCGGCACTCCCGGACCAAGAGAAGCTCTGCCAGAGAGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | CCCTGCCTTCTTAGAGGACTTGGCACCCGCTGCCAGTaGGGAGGTGATAGCTTTCAACAGGTCCATTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PCLLRGLGTRCQ*GGDSFQQVHCC Trigger: ACAGCAATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGCCATTGCCCTTCTTCTaGTGGTGCTCCTTCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NGGLAASSTTHVFPGLSLPLPFF*WCSFLL Trigger: GAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGG...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | GAGGGCTTCTTCAGCGAAGCTTGTTGGGCAGGGTACTaGAAAGCCTCCTCTTCCACTGAGCTGCTTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EGFFSEACWAGY*KASSSTELLPF Trigger: GAAGGGAAGCAGCTCAGTGGAAGAGGAGGCTTTTCAGTACCCTGCCCAACAAGCTTCGCTGAAGAAGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | GACAGCAGTCGGGCTATGGGAAGGAGTTCCCTAGGATaGCAGCTGGCTACATGGTCCCCAAAGGTTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: DSSRAMGRSSLG*QLATWSPKVYC Trigger: ACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATAGCCCGACTGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | TTTCTCCCCTGCCTTCTTAGAGGACTTGGCACCCGCTaGCAGTGGGGAGGTGATAGCTTTCAACAGGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FLPCLLRGLGTR*QWGGDSFQQVH Trigger: ATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | AGGCTCTGTAGCTCGTGCCCTAGGAGTAAAGCACCTTaGTCGTCCCGAGCTAGTTTCTTCGAGGGCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RLCSSCPRSKAP*SSRASFFEGFF Trigger: GAAGAAGCCCTCGAAGAAACTAGCTCGGGACGAGCAAGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | ATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATaGTCCCCAAAGGTTTACTGTGATGCTGCCTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MGRSSLGCQLAT*SPKVYCDAASF Trigger: GAACGAGGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | AGTTCACTACTGTCTGTAGCAAGGGCAATGGAGGACTaGCTGCTTCCTCTACCACACATGTCTTCCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLLSVARAMED*LLPLPHMSSLA Trigger: GGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTTGCTACAGACAGTAGTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | CTTCTTGTGGTGCTCCTTCCTGCTCTCTGGATGGCTTaGAGAGCTGGAGGATTTCTCCCCTGCCTTCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLVVLLPALWMA*RAGGFLPCLLR Trigger: TCTAAGAAGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | TGCCAGTGGGGAGGTGATAGCTTTCAACAGGTCCATTaGTGTGTCCGGAGACTGTGGGCTAGACTTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CQWGGDSFQQVH*CVRRLWARLLL Trigger: AAGAAGAAGTCTAGCCCACAGTCTCCGGACACAGCAATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTAGCAGGTCTGGGTCTTaGGGAATAAGGGAAATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QWRTGCFLYHTCLPWPLLSRSGS*GIREIR Trigger: CCTAATTTCCCTTATTCCCAAAGACCCAGACCTGCT...AAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTCTCCCAGCAACTGGAGATGAGCAGCGACATCAATGGGCTCTGTTTCAGGAGCAGGTCTGGGTCTTaGGGAATAAGGGAAATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLSQQLEMSSDINGLCFRSRSGS*GIREIR Trigger: CCTAATTTCCCTTATTCCCAAAGACCCAGACCTGCT...CCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGGTTGTGGCTTCAGCTTaGTTCTGTTTGTGCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NGGLAASSTTHVFPGLSLVVASA*FCLCCR Trigger: TCTGCAGCACAAACAGAACAAAGCTGAAGCCACAAC...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTATTAACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCACCTGTGATGTCGAGATaGGCACTGTGGGGTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VINSAWFWQGRESLTEFPPVMSR*ALWGSG Trigger: TCCAGAACCCCACAGTGCCAATCTCGACATCACAGG...TGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGTCTGTCCCAGGCGTCTaGGAAGTCACAGTCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WATNAASGRWQLWFLYTKSVPGV*EVTVQA Trigger: TGCCTGGACTGTGACTTCCAAGACGCCTGGGACAGA...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | TGCAGAGCACAATGTACCCACCAGGGGAACCAGAGCTaGACCAAGAACCACCAAACAGCTAAGCAGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CRAQCTHQGNQS*TKNHQTAKQQN Trigger: ATTCTGCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTACATTGTGCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | ATGCCAGCTGGCTACATGGTCCCCAAAGGTTTACTGTaGTGCTGCCTCGTTCCATCCAGGCCATTAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: MPAGYMVPKGLL*CCLVPSRPLEE Trigger: TTCTTCTAATGGCCTGGATGGAACGAGGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | CTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTaGTACCATTTCTCACAGGAAACTTCTGCAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPLPHMSSLASP*YHFSQETSAGS Trigger: TGACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | AGATGGCAGCTTTGGTTTTTATACACCAAGCCTTGCTaGCCAGACAAGCAGGTTCAACAGGTGGCACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: RWQLWFLYTKPC*PDKQVQQVAPT Trigger: TGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTaGTTTTTATACACCAAGCCTTGCTGGCCAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: WATNAASGRWQL*FLYTKPCWPDK Trigger: CTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | AGCGAAGGGGTAGACAGTCTTCTGTCCCAGGCGTCTTaGAAGTCACAGTCCAGGCATAATGTATGCAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: SEGVDSLLSQAS*KSQSRHNVCNV Trigger: AACATTGCATACATTATGCCTGGACTGTGACTTCCAAGACGCCTGGGACAGAAGACTGTCTACCCCTTCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTGTGGCTTCAGCTTTGTTCTGTTTGTGCTGCAGATACTGAGCCTTTTGCTTTGGATTTGTGGGCATaGCTGTCATCCAGGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLWLQLCSVCAADTEPFALDLWA*LSSRES Trigger: GCTCTCCCTGGATGACAGCAATGCCCACAAATCCAA...AGCAAAAGGCTCAGTATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGCAAAGTCGAAATGTCTaGTGTATCACAAATGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NGGLAASSTTHVFPGLSLQSRNV*CITNED Trigger: GTCTTCATTTGTGATACACAAGACATTTCGACTTTG...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTTGGAAGATGGCAGCTTaGGTTTTTATACACCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TTKQLSSRILRICWATNAWKMAA*VFIHQA Trigger: GGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCA...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTCTTTCAACAGGTCCATaGCTGTGTCCGGAGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SQIKSQNCSELTQSCEKLLSTGP*LCPETV Trigger: CACAGTCTCCGGACACAGCAATGGACCTGTTGAAAG...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | AGGATTTGTTGGGCAACCAATGCTGCTAGTGGAAGATaGCAGCTTTGGTTTTTATACACCAAGCCTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RICWATNAASGR*QLWFLYTKPCW Trigger: CCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCAACAAATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | GTGTCTCTGTGTTCACATAGAGTGGCTTCATCTTTTTaGATTTGTGGGCATTGCTGTCATCCAGGGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSLCSHRVASSF*ICGHCCHPGRA Trigger: AGCTCTCCCTGGATGACAGCAATGCCCACAAATCCAAAAAGATGAAGCCACTCTATGTGAACACAGAGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTAGCAGGTCTGGGTCTTaGGGAATAAGGGAAATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RNDKSVCSTCSCWWRLVISRSGS*GIREIR Trigger: CCTAATTTCCCTTATTCCCAAAGACCCAGACCTGCT...AATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTATTAACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCATTCATCTTTTTGGATTaGTGGGCATTGCTGTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: VINSAWFWQGRESLTEFPFIFLD*WALLSS Trigger: GGATGACAGCAATGCCCACAAATCCAAAAAGATGAA...TGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | GCAGGTTCAACAGGTGGCACCAACAGCTTTGGTTTCTaGAAGGTATTTATTTCTCTGCTGCCAAGAATCACA | + |
|
Preference number: 3 (lower is better) Translates to: AGSTGGTNSFGF*KVFISLLPRIT Trigger: TGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | TTAGAAGAAAGCATGGTTATTAACTCAGCTTGGTTTTaGCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LEESMVINSAWF*QGRESLTEFPS Trigger: GCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAACCATGCTTTCTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | AGGCCATTAGAAGAAAGCATGGTTATTAACTCAGCTTaGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RPLEESMVINSA*FWQGRESLTEF Trigger: GAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAACCATGCTTTCTTCTAATGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | AACCTTCTGCGCTGGATGCTTTTCTCTTCACAGTTGTaGCTTCAGCTTTGTTCTGTTTGTGCTGCAGATACT | + |
|
Preference number: 3 (lower is better) Translates to: NLLRWMLFSSQL*LQLCSVCAADT Trigger: AGTATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | TCTTGTGTATCACAAATGAAGACTGTTCTTCTATGCTaGATCCTCCAAAATACCAGCCCTCCACCTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SCVSQMKTVLLC*ILQNTSPPPLS Trigger: GGAGAGAGGTGGAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTTCATTTGTGATACACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR CCA 72 bp | CCCAGGTTACTCCATGTCCAAAAGTTTGTAGTCAGCTaGCCTCCTCCCAAGATCTTTACTACATTTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: PRLLHVQKFVVS*PPPKIFTTFLI Trigger: AATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTAAATTTCTGCTCTGCTaGATTTCAGTTCCCACATAT | + |
|
Preference number: 3 (lower is better) Translates to: TTKQLSSRILRICWATNAKFLLC*ISVPTY Trigger: ATATGTGGGAACTGAAATCAAGCAGAGCAGAAATTT...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | GTTCCTTTCCCTATTTCTCAGATTAAATCTCAAAACTaGTCTGAGCTGACACAGTCCTGTGAGAAGCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VPFPISQIKSQN*SELTQSCEKLS Trigger: GCTAAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGAAATAGGGAAAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGCCTGAATCCAAAATTTTTCCTCTAATAGTACCAAATACCACAAGGTACTTCCCTGGCCTCTCCTaGATACCATTTCTCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRPESKIFPLIVPNTTRYFPGLS*IPFLTG Trigger: TCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAA...GTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTACAATAAAACTGGAGACACAGGTATCTCTTTAGTAGGAATTGGAATGAGTTTCCCTGGCCTCTCCTaGATACCATTTCTCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GYNKTGDTGISLVGIGMSFPGLS*IPFLTG Trigger: TCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAA...ACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | TCTCACAGGAAACTTCTGCAGGGTCAAATGAGGTTCTaGCATGTTAACTCAAATGGAAATTTCTGCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SHRKLLQGQMRF*HVNSNGNFCSA Trigger: AGCAGAGCAGAAATTTCCATTTGAGTTAACATGTCAGAACCTCATTTGACCCTGCAGAAGTTTCCTGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | GCTTTTAGACAGACATTAAGAAATGACAAATCTGTATaGTCCACATGCTCCTGCTGGTGGAGGCTTGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: AFRQTLRNDKSV*STCSCWWRLVI Trigger: AATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGCAAGGTATTTATTTCTCTGCTGCCAAGAATCACATAGCTGAGGCTATAAGTGGCTTCATCTTTTaGGATTTGTGGGCATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLQGIYFSAAKNHIAEAISGFIF*DLWALL Trigger: CAGCAATGCCCACAAATCCAAAAAGATGAAGCCACT...TATAGCCTCAGCTATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCTGGAAGATGGCAGCTTaGGTTTTTATACACCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCWKMAA*VFIHQA Trigger: GGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCA...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | ATACCATTTCTCACAGGAAACTTCTGCAGGGTCAAATaGGGTTCTGACATGTTAACTCAAATGGAAATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IPFLTGNFCRVK*GSDMLTQMEIS Trigger: AGAAATTTCCATTTGAGTTAACATGTCAGAACCTCATTTGACCCTGCAGAAGTTTCCTGTGAGAAATGGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR GCA 72 bp | TTAAGAAATGACAAATCTGTATGCTCCACATGCTCCTaGTGGTGGAGGCTTGTTATTAAATTATATATACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRNDKSVCSTCS*WWRLVIKLYIQ Trigger: CTGTATATATAATTTAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
||
| 3UTR TCA 72 bp | ATGATTCCAAAGTCGAAATGTCTTGTGTATCACAAATaGAGACTGTTCTTCTATGCTGAATCCTCCAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: MIPKSKCLVYHK*RLFFYAESSKI Trigger: TATTTTGGAGGATTCAGCATAGAAGAACAGTCTTCATTTGTGATACACAAGACATTTCGACTTTGGAATCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCGGACTTGGCACCCGCTaGCAGTGGGGAGGTGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGNGGLAASSTTHVFPGLGLGTR*QWGGDS Trigger: GCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCC...GAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR CCA 90 bp | GTACCCACCAGGGGAACCAGAGCTGAACCAAGAACCACCAAACAGCTAAGCAGCCAGGAAGTGGCAGGGTaGGGACACTGGAGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPTRGTRAEPRTTKQLSSQEVAG*GHWRQG Trigger: GCCCTGCCTCCAGTGTCCCCACCCTGCCACTTCCTG...GCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| 3UTR CAA 72 bp | GAGCTGGAGGATTTCTCCCCTGCCTTCTTAGAGGACTaGGCACCCGCTGCCAGTGGGGAGGTGATAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELEDFSPAFLED*APAASGEVIAF Trigger: GAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| CDS-3UTR TCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTTCTTGGAAGAGCTCCTaGCCTGCGCGGCGACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNPGALSYLLSNGEAGLGSWKSS*PARRLL Trigger: AAGAAGTCGCCGCGCAGGTCAGGAGCTCTTCCAAGA...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGCAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCGCTCTCTGGATGGCTTaGAGAGCTGGAGGATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGNGGLAASSTTHVFPGLALWMA*RAGGFL Trigger: GAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGC...GAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR GCA 90 bp | GGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGATAGGGAGAGCTCTCCACTaGTGCCATTGCCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLAASSTTHVFPGLSLIGRALH*CHCPSS Trigger: AGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCC...TATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR TCA 90 bp | AACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCCAGCAACTGGAGATaGGCAGCGACATCAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSAWFWQGRESLTEFPSNPSNWR*AATSMG Trigger: GCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGG...GTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR GCA 90 bp | CAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGGAGGATTTCTCCCCTaGCTTCTTAGAGGACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QWRTGCFLYHTCLPWPLLGGFLP*LLRGLG Trigger: GCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCC...AAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR GCA 90 bp | CAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTCTCCACTGCTGCCATTaGCCTTCTTCTTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QWRTGCFLYHTCLPWPLLLHCCH*PSSCGA Trigger: AGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAG...AAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTACTGTGATGCTGCCAGGCTCTGTAGCTCGTaGCCTAGGAGTAAAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLGCQLATWSPKVYCDAARLCSS*PRSKAP Trigger: AGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCT...GGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| 3UTR CAA 72 bp | TCTACTAGAATTGGGTCAAGCCCTGTGATGTCGAGATaGGCACTGTGGGGTTCTGGAAGCTGGGAGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STRIGSSPVMSR*ALWGSGSWETS Trigger: TGACGTCTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGACATCACAGGGCTTGACCCAATTCTAGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
||
| CDS-3UTR TCA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGCTACAGAAGAGGCTCTaGCTTTCATGGAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGGLAASSTTHVFPGLSLLQKRL*LSWNLL Trigger: CAGAAGGTTCCATGAAAGTCAGAGCCTCTTCTGTAG...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTGGAGCACTCAGCTATGTGTCCGGAGACTGTaGGCTAGACTTCTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGKGISHRVPKQPWSTQLCVRRL*ARLLLF Trigger: AAAAAGAAGAAGTCTAGCCCACAGTCTCCGGACACA...TAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR CCA 90 bp | GTTATTAACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCAGGCACCCGCTGCCAGTaGGGAGGTGATAGCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VINSAWFWQGRESLTEFPGTRCQ*GGDSFQ Trigger: TTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCC...TGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR CCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTGGTGGGGACTTCTTTTaGGGTGACAGTACTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SNPGALSYLLSNGEAGLGGGDFF*GDSTPT Trigger: TGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACC...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR CCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTCTGTTTCAGGAGCTTTaGCTGGTGAGGCTGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SNPGALSYLLSNGEAGLGLFQEL*LVRLAK Trigger: TTTTGCCAGCCTCACCAGCCAAAGCTCCTGAAACAG...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR TCA 90 bp | AGCAACCCTGGAGCACTCAGCTATCTTCTCTCTAATGGGGAAGCAGGTCTGGGTCTACAGAAGAGGCTCTaGCTTTCATGGAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNPGALSYLLSNGEAGLGLQKRL*LSWNLL Trigger: CAGAAGGTTCCATGAAAGTCAGAGCCTCTTCTGTAG...ACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR CCA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTAGATGGTCAGCCACAATaGTTACCCGGTACTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLDGQPQ*LPGTPY Trigger: GTAAGGAGTACCGGGTAACCATTGTGGCTGACCATC...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CCA 90 bp | GGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCGTTCAGGTAGTTGTGTaGTCAGGCATGCCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQPMLLVEDGSFGFYTPSVQVVV*SGMPEG Trigger: GCCCTCTGGCATGCCTGACCACACAACTACCTGAAC...GCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| 3UTR CAA 72 bp | TGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTaGCTGGCCAGACAAGCAGGTTCAACAGGTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: WKMAALVFIHQA*LARQAGSTGGT Trigger: GGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| CDS-3UTR TCA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGATGTCCTCAAAGCTGTaGTCACCATCAAAGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NGGLAASSTTHVFPGLSLMSSKL*SPSKQS Trigger: AGATTGCTTTGATGGTGATCACAGCTTTGAGGACAT...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR TCA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTATTGTGCTGCAGATACTaGGCCTTTTGCTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLLCCRY*AFCFQI Trigger: GATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAA...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR CCA 90 bp | GTTATTAACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCACGCTTCTTTTCTCGTTaGCTTCGGCCAGCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VINSAWFWQGRESLTEFPRFFSR*LRPAAS Trigger: ACTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCG...TGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCTGGCCTCCTCCCAAGATCTTTACTACATTTCTGATTATAAGACAGGTTCTTGGAAGAGCTCCTaGCCTGCGCGGCGACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLASSQDLYYISDYKTGSWKSS*PARRLL Trigger: AAGAAGTCGCCGCGCAGGTCAGGAGCTCTTCCAAGA...ACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTCCCAGCAACTGGAGATaGGCAGCGACATCAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLPSNWR*AATSMG Trigger: GCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGG...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTGAAGAGCTCCTGACCTaGGCGGCGACTTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLEELLT*AATSSS Trigger: AGAGGAAGAAGTCGCCGCGCAGGTCAGGAGCTCTTC...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR GCA 90 bp | GGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCTTTCAACAGGTCCATTaGTGTGTCCGGAGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQPMLLVEDGSFGFYTPSFQQVH*CVRRLW Trigger: CCACAGTCTCCGGACACAGCAATGGACCTGTTGAAA...GCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR GCA 90 bp | GGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCAGAGCTCTCCACTGCTaGCATTGCCCTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQPMLLVEDGSFGFYTPSRALHC*HCPSSC Trigger: ACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCT...GCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CCA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTTCGAGATTGGCACTGTaGGGTTCTGGAAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLSRLAL*GSGSWE Trigger: CTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGA...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CCA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTGTTCAGGTAGTTGTGTaGTCAGGCATGCCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLVQVVV*SGMPEG Trigger: GCCCTCTGGCATGCCTGACCACACAACTACCTGAAC...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR CCA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTAAAATCTATACCTGGATaGTCAGCCACAATGGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLKSIPG*SATMVT Trigger: GGTAACCATTGTGGCTGACCATCCAGGTATAGATTT...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR TCA 90 bp | AACTCAGCTTGGTTTTGGCAGGGAAGGGAATCTCTCACCGAGTTCCCAAGCAACCCTTTGGTGAGAGAATaGGTTTCATCTTTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSAWFWQGRESLTEFPSNPLVRE*VSSLSH Trigger: ATGGCTTAAAGATGAAACTCATTCTCTCACCAAAGG...GTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCAAGGTATTTATTTCTCTGCTGCCAAGAATCACATAGCTGAGGCTATAGAAGAGCTCCTGACCTaGGCGGCGACTTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLQGIYFSAAKNHIAEAIEELLT*AATSSS Trigger: AGAGGAAGAAGTCGCCGCGCAGGTCAGGAGCTCTTC...TATAGCCTCAGCTATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTCCTCTTCCACTGAGCTaGTTCCCTTCTCCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLPLPLS*FPSPLV Trigger: CACCAAAGGAGAAGGGAAGCAGCTCAGTGGAAGAGG...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR GCA 90 bp | GAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTATCTGAGGATGACTTGTaGTTCTTCCGGGCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EMTNLYAPHAPAGGGLLLSEDDL*FFRAVF Trigger: GAAAACGGCCCGGAAGAAGCACAAGTCATCCTCAGA...TAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCAAGGTATTTATTTCTCTGCTGCCAAGAATCACATAGCTGAGGCTATACAGACACTGCCACCATaGCCTCTGTCTCCTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLQGIYFSAAKNHIAEAIQTLPP*PLSPVG Trigger: GCCTACAGGAGACAGAGGGCATGGTGGCAGTGTCTG...TATAGCCTCAGCTATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CCA 90 bp | GAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTATTCCTGCTCTCTGGATaGCTTGAAGAGCTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EMTNLYAPHAPAGGGLLLFLLSG*LEELED Trigger: ATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAA...TAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CCA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTGGTGGGGACTTCTTTTaGGGTGACAGTACTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLGGDFF*GDSTPT Trigger: TGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACC...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| 3UTR CAA 72 bp | TGGAACCTTCTGCGCTGGATGCTTTTCTCTTCACAGTaGTGGCTTCAGCTTTGTTCTGTTTGTGCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WNLLRWMLFSSQ*WLQLCSVCAAD Trigger: ATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTTTGGCTTCGGCCAGCTaGAAGTCCTATGTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLLASAS*KSYVLK Trigger: TTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAA...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR CCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTTTGCCCTTCTTCTTGTaGTGCTCCTTCCTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLLPFFL*CSFLLS Trigger: AGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAA...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CCA 90 bp | AGAAGGCCTGAATCCAAAATTTTTCCTCTAATAGTACCAAATACCACAAGGTACGGCACTGTGGGGTTCTaGAAGCTGGGAGACGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRPESKIFPLIVPNTTRYGTVGF*KLGDVR Trigger: TCTGACGTCTCCCAGCTTCCAGAACCCCACAGTGCC...GTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CCA 90 bp | AGTCAGCTGGCCTCCTCCCAAGATCTTTACTACATTTCTGATTATAAGACAGGTGATGGTCAGCCACAATaGTTACCCGGTACTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLASSQDLYYISDYKTGDGQPQ*LPGTPY Trigger: GTAAGGAGTACCGGGTAACCATTGTGGCTGACCATC...ACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTTGGAACCTTCTGCGCTaGATGCTTTTCTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RNDKSVCSTCSCWWRLVIWNLLR*MLFSSQ Trigger: CTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCA...AATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CCA 90 bp | GAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTATGGAACCTTCTGCGCTaGATGCTTTTCTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EMTNLYAPHAPAGGGLLLWNLLR*MLFSSQ Trigger: CTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCA...TAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| 3UTR CAA 72 bp | CTTGGAAGTCACAGTCCAGGCATAATGTATGCAATGTaGTCCAGCGTGTTTGACAAGACCTGTTTAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSHSPGIMYAM*SSVFDKTCLGQ Trigger: CTGTCCTAAACAGGTCTTGTCAAACACGCTGGACAACATTGCATACATTATGCCTGGACTGTGACTTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| CDS-3UTR TCA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTACTTCTTCTTCTTCTTaGTCTCCCTGTAAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTKQLSSRILRICWATNATSSSS*SPCKSH Trigger: ATGACTCTTACAGGGAGATCAAGAAGAAGAAGAAGT...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR TCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTTTGTGCTGCAGATACTaGGCCTTTTGCTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLLCCRY*AFCFQI Trigger: GATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAA...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR GCA 90 bp | TGGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGTTTCATGGAACCTTCTaGGCTGGATGCTTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WATNAASGRWQLWFLYTKFHGTF*AGCFSL Trigger: AAGAGAAAAGCATCCAGCGCAGAAGGTTCCATGAAA...CTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGCAAGGTATTTATTTCTCTGCTGCCAAGAATCACATAGCTGAGGCTATAGATGGCTTGAAGAGCTaGAGGATTTCTCCCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLQGIYFSAAKNHIAEAIDGLKS*RISPLP Trigger: AGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATC...TATAGCCTCAGCTATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CCA 90 bp | CCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTGCTAAATCTATACCTGGATaGTCAGCCACAATGGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: PMLLVEDGSFGFYTPSLAKSIPG*SATMVT Trigger: GGTAACCATTGTGGCTGACCATCCAGGTATAGATTT...AGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR TCA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTATGTCCTCAAAGCTGTaGTCACCATCAAAGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLMSSKL*SPSKQS Trigger: AGATTGCTTTGATGGTGATCACAGCTTTGAGGACAT...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR GCA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTTTTCATGGAACCTTCTaGGCTGGATGCTTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLFHGTF*AGCFSL Trigger: AAGAGAAAAGCATCCAGCGCAGAAGGTTCCATGAAA...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR CCA 90 bp | GGTTACAATAAAACTGGAGACACAGGTATCTCTTTAGTAGGAATTGGAATGAGTCGCTTCTTTTCTCGTTaGCTTCGGCCAGCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYNKTGDTGISLVGIGMSRFFSR*LRPAAS Trigger: ACTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCG...ACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTCCCAAAATCTATACCTaGATGGTCAGCCACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLPKIYT*MVSHNG Trigger: ACCATTGTGGCTGACCATCCAGGTATAGATTTTGGG...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTTCCCTTCTCCTTTGGTaGGAGAATGAGTTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQIKSQNCSELTQSCEKLSLLLW*ENEFHL Trigger: AAGATGAAACTCATTCTCTCACCAAAGGAGAAGGGA...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGATCTTTACTACATTTCTGATTATAAGACAGGTAAGGCAAATGGTCAGTTTGGCTTCGGCCAGCTaGAAGTCCTATGTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKIFTTFLIIRQVRQMVSLASAS*KSYVLK Trigger: TTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAA...ACTGACCATTTGCCTTACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
||
| CDS-3UTR GCA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCAGGAGTAAAGCACCTTaGTCGTCCCGAGCTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCRSKAP*SSRASF Trigger: GAAACTAGCTCGGGACGAGCAAGGTGCTTTACTCCT...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR CCA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTTGTGTTCACATAGAGTaGCTTCATCTTTTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLCVHIE*LHLFGF Trigger: AAATCCAAAAAGATGAAGCCACTCTATGTGAACACA...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
||
| CDS-3UTR CCA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCCCCAAAATCTATACCTaGATGGTCAGCCACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCPKIYT*MVSHNG Trigger: ACCATTGTGGCTGACCATCCAGGTATAGATTTTGGG...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| 3UTR CAA 72 bp | GGTGACATTCCTTTCTATTTCACTTTCCTAACATTATaGAGGGCCATGAAGTTCCTTTCTGAGTCACAACAC | + |
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Preference number: 4 (lower is better) Translates to: GDIPFYFTFLTL*RAMKFLSESQH Trigger: GTGTTGTGACTCAGAAAGGAACTTCATGGCCCTCAATAATGTTAGGAAAGTGAAATAGAAAGGAATGTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 ENSMUST00000145919.2 |
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| CDS-3UTR TCA 90 bp | CCCAAGATCTTTACTACATTTCTGATTATAAGACAGGTAAGGCAAATGGTCAGTCAAATCACTGTCCTTTaGCTTCTTCTTGGAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PKIFTTFLIIRQVRQMVSQITVL*LLLGRA Trigger: AGCTCTTCCAAGAAGAAGTCAAAGGACAGTGATTTG...ACTGACCATTTGCCTTACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR CCA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCATCTTTTTGGATTTGTaGGCATTGCTGTCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCIFLDL*ALLSSR Trigger: CCTGGATGACAGCAATGCCCACAAATCCAAAAAGAT...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CCA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCGTGGCTTCATCTTTTTaGATTTGTGGGCATTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCVASSF*ICGHCC Trigger: ACAGCAATGCCCACAAATCCAAAAAGATGAAGCCAC...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | TCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTACTGTGATGCTGCCCTGGCAGAGCTTCTCTaGGTCCGGGAGTGCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLGCQLATWSPKVYCDAALAELL*VRECRF Trigger: GAAGCGGCACTCCCGGACCAAGAGAAGCTCTGCCAG...GGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | GTCCCCTACCCAGTCCACCTAAGCTCCACCTCCCCACCCAGGTTACTCCATGTCTTGGATTTGTGGGCATaGCTGTCATCCAGGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VPYPVHLSSTSPPRLLHVLDLWA*LSSRES Trigger: GCTCTCCCTGGATGACAGCAATGCCCACAAATCCAA...GACATGGAGTAACCTGGGTGGGGAGGTGGAGCTTAGGTGGACTGGGTAGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | GTCCCCTACCCAGTCCACCTAAGCTCCACCTCCCCACCCAGGTTACTCCATGTCTCCTTTGACTTCTTCTaGGAAGAGCTCCTGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: VPYPVHLSSTSPPRLLHVSFDFF*EELLTC Trigger: GCAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGA...GACATGGAGTAACCTGGGTGGGGAGGTGGAGCTTAGGTGGACTGGGTAGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR CAA 90 bp | CACCTCCCCACCCAGGTTACTCCATGTCCAAAAGTTTGTAGTCAGCTGGCCTCCGAGTCTGAGGATGACTaGTGCTTCTTCCGGGCCGTT | + |
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Preference number: 5 (lower is better) Translates to: HLPTQVTPCPKVCSQLASESEDD*CFFRAV Trigger: AACGGCCCGGAAGAAGCACAAGTCATCCTCAGACTC...GGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGGGGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | TATGGGAAGGAGTTCCCTAGGATGCCAGCTGGCTACATGGTCCCCAAAGGTTTACCGCTTCTTTTCTCGTaGGCTTCGGCCAGCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: YGKEFPRMPAGYMVPKGLPLLFS*ASASCK Trigger: CTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCGG...TAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR CAA 90 bp | GGGCAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCCGCTTCTTTTCTCGTaGGCTTCGGCCAGCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: GQPMLLVEDGSFGFYTPSPLLFS*ASASCK Trigger: CTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCGG...GCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR CAA 90 bp | CACCTCCCCACCCAGGTTACTCCATGTCCAAAAGTTTGTAGTCAGCTGGCCTCCGTTGTGGCTTCAGCTTaGTTCTGTTTGTGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: HLPTQVTPCPKVCSQLASVVASA*FCLCCR Trigger: TCTGCAGCACAAACAGAACAAAGCTGAAGCCACAAC...GGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGGGGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CAA 90 bp | AGATGGCAGCTTTGGTTTTTATACACCAAGCCTTGCTGGCCAGACAAGCAGGTTCCATTGCCCTTCTTCTaGTGGTGCTCCTTCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RWQLWFLYTKPCWPDKQVPLPFF*WCSFLL Trigger: GAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGG...AACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | AATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTGCAGATACTGAGCCTTTaGCTTCCAGATCAGTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: NGGLAASSTTHVFPGLSLQILSL*LPDQFV Trigger: GACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTG...CAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CAA 90 bp | CAATGGAGGACTGGCTGCTTCCTCTACCACACATGTCTTCCCTGGCCTCTCCTTACAAATCACTGTCCTTaGACTTCTTCTTGGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: QWRTGCFLYHTCLPWPLLTNHCP*TSSWKS Trigger: GCTCTTCCAAGAAGAAGTCAAAGGACAGTGATTTGT...AAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR CAA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTCTTTCAACAGGTCCATaGCTGTGTCCGGAGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: TTKQLSSRILRICWATNALSTGP*LCPETV Trigger: CACAGTCTCCGGACACAGCAATGGACCTGTTGAAAG...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS GCA 90 bp | GAAGTCTTTGTAAGACCGCTTCTTTTCTCGTTGGCTTCGGCCAGCTaGAAGTCCTATGTCCTCAAAGCTGTGATCACCATCAAAGCAATC | + |
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Preference number: 5 (lower is better) Translates to: EVFVRPLLFSLASAS*KSYVLKAVITIKAI Trigger: GATTGCTTTGATGGTGATCACAGCTTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCGGTCTTACAAAGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGCTGGCCTCCTCCCAAGATCTTTACTACATTTCTGATTATAAGACAGGTTCTCCACTGCTGCCATaGCCCTTCTTCTTGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SQLASSQDLYYISDYKTGSPLLP*PFFLWC Trigger: GCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGA...ACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | GAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTATGCTCTCTGGATGGCTaGAAGAGCTGGAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: EMTNLYAPHAPAGGGLLLCSLDG*KSWRIS Trigger: AGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCA...TAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | ATCACAAATGAAGACTGTTCTTCTATGCTGAATCCTCCAAAATACCAGCCCTCCTCCTTTGACTTCTTCTaGGAAGAGCTCCTGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: ITNEDCSSMLNPPKYQPSSFDFF*EELLTC Trigger: GCAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGA...GGAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTTCATTTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145919.2 |
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| CDS-3UTR CAA 90 bp | ACCACCAAACAGCTAAGCAGCAGAATCCTCAGGATTTGTTGGGCAACCAATGCTTCCTTGTGTCTGTCTTaGTCCTTCTTCTTTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: TTKQLSSRILRICWATNASLCLS*SFFFLL Trigger: GAGCAAAAAGAAGAAGGACAAAGACAGACACAAGGA...AGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | AGAAATGACAAATCTGTATGCTCCACATGCTCCTGCTGGTGGAGGCTTGTTATTGTTGTGGCTTCAGCTTaGTTCTGTTTGTGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RNDKSVCSTCSCWWRLVIVVASA*FCLCCR Trigger: TCTGCAGCACAAACAGAACAAAGCTGAAGCCACAAC...AATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CAA 90 bp | CAACCAATGCTGCTAGTGGAAGATGGCAGCTTTGGTTTTTATACACCAAGCCTTCAGATACTGAGCCTTTaGCTTCCAGATCAGTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: QPMLLVEDGSFGFYTPSLQILSL*LPDQFV Trigger: GACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTG...AAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTAGTGGCTTCATCTTTTaGGATTTGTGGGCATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SQIKSQNCSELTQSCEKLSGFIF*DLWALL Trigger: CAGCAATGCCCACAAATCCAAAAAGATGAAGCCACT...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | TCTCAGATTAAATCTCAAAACTGCTCTGAGCTGACACAGTCCTGTGAGAAGCTTTTCATCTTTTTGGATTaGTGGGCATTGCTGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: SQIKSQNCSELTQSCEKLFIFLD*WALLSS Trigger: GGATGACAGCAATGCCCACAAATCCAAAAAGATGAA...AAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041759.14 |
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| CDS-3UTR CAA 90 bp | AGTCAGCTGGCCTCCTCCCAAGATCTTTACTACATTTCTGATTATAAGACAGGTCTTTTCTCTTCACAGTaGTGGCTTCAGCTTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SQLASSQDLYYISDYKTGLFSSQ*WLQLCS Trigger: AGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAG...ACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS-3UTR CAA 90 bp | TATGGACGTCTTGGAGCTTTTAGACAGACATTAAGAAATGACAAATCTGTATGCCTTTTCTCTTCACAGTaGTGGCTTCAGCTTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: YGRLGAFRQTLRNDKSVCLFSSQ*WLQLCS Trigger: AGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAG...GCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000109940.2 |
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| CDS GCA 72 bp | GTAAGACCGCTTCTTTTCTCGTTGGCTTCGGCCAGCTaGAAGTCCTATGTCCTCAAAGCTGTGATCACCATC | + |
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Preference number: 6 (lower is better) Translates to: VRPLLFSLASAS*KSYVLKAVITI Trigger: GATGGTGATCACAGCTTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCGGTCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS GCA 72 bp | CTGTCCTTTGACTTCTTCTTGGAAGAGCTCCTGACCTaGGCGGCGACTTCTTCCTCTTCCCTTAAGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSFDFFLEELLT*AATSSSSLKKS Trigger: AGACTTCTTAAGGGAAGAGGAAGAAGTCGCCGCGCAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS CAA 72 bp | CCCAAGAAGAACAAATCACTGTCCTTTGACTTCTTCTaGGAAGAGCTCCTGACCTGCGCGGCGACTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PKKNKSLSFDFF*EELLTCAATSS Trigger: GGAAGAAGTCGCCGCGCAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGACAGTGATTTGTTCTTCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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| CDS TCA 72 bp | AATCACTGTCCTTTGACTTCTTCTTGGAAGAGCTCCTaGCCTGCGCGGCGACTTCTTCCTCTTCCCTTAAGA | + |
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Preference number: 6 (lower is better) Translates to: NHCPLTSSWKSS*PARRLLPLPLR Trigger: TCTTAAGGGAAGAGGAAGAAGTCGCCGCGCAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGACAGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041759.14 ENSMUST00000145919.2 |
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