Pregenerated sensors for HMGCS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027875Ensembl transcript IDs: ENSMUST00000090746.3, ENSMUST00000120541.8
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCACAGGGGAGCTCTGGTCCACAGCAGCATGAGCCTGTGGCGCTaGTTGTGTCAGGGAGAGACACCCAGGATTCACAGAGGGAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: LHRGALVHSSMSLWR*LCQGETPRIHRGRP Trigger: CGGCCTCCCTCTGTGAATCCTGGGTGTCTCTCCCTGACACAATCAGCGCCACAGGCTCATGCTGCTGTGGACCAGAGCTCCCCTGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR TCA 90 bp | CAAGAAGTTCTGGAAAGATCGAGGGTCTCATGTGCATGGAGGGGCTaGGGAGGGGCTAGGGCTGGATTAGCTGCTCAGCCTGGGCCTCGC | + |
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Preference number: 1 (lower is better) Translates to: QEVLERSRVSCAWRG*GGARAGLAAQPGPR Trigger: GCGAGGCCCAGGCTGAGCAGCTAATCCAGCCCTAGCCCCTCCTCAGCCCCTCCATGCACATGAGACCCTCGATCTTTCCAGAACTTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR GCA 90 bp | AACAAATGGCTGCTCTGCCGGGCTGTGGGGAAAGATCTGCATCCCTaGAGGTCAGCGGCTCCCCTTTCTTTCATCTCCCTCTTCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: NKWLLCRAVGKDLHP*RSAAPLSFISLFTG Trigger: CCCTGTGAAGAGGGAGATGAAAGAAAGGGGAGCCGCTGACCTGCAGGGATGCAGATCTTTCCCCACAGCCCGGCAGAGCAGCCATTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR TCA 90 bp | TCTTTCATCTCCCTCTTCACAGGGGAGCTCTGGTCCACAGCAGCATaGGCCTGTGGCGCTGATTGTGTCAGGGAGAGACACCCAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: SFISLFTGELWSTAA*ACGADCVRERHPGF Trigger: GAATCCTGGGTGTCTCTCCCTGACACAATCAGCGCCACAGGCTCATGCTGCTGTGGACCAGAGCTCCCCTGTGAAGAGGGAGATGAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR GCA 90 bp | GGGGGTCCCAGGGATGGAACTCAGGTTGTCAAGGTTAGTAGCAGGTaGCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTT | + |
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Preference number: 1 (lower is better) Translates to: GGPRDGTQVVKVSSR*LNSLGHLPSSTVLL Trigger: AAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTTGACAACCTGAGTTCCATCCCTGGGACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR CCA 90 bp | AGCTCTTCGTGGGTTCTGTGTCCCTGTCTTGAACCAGGGGGACACTaGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: SSSWVLCPCLEPGGH*LLFRVDRHGCSDLR Trigger: TCTTAGGTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCCTGGTTCAAGACAGGGACACAGAACCCACGAAGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR TCA 90 bp | TGTCCTGGAACTTGCTCTGTAGACCAAGTTCACATGTATCAGCCTTaGACTCAGCCCTGCCTCGGCTTCCCAAGTGCTGAGATTTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: CPGTCSVDQVHMYQP*TQPCLGFPSAEISV Trigger: AACTGAAATCTCAGCACTTGGGAAGCCGAGGCAGGGCTGAGTTCAAGGCTGATACATGTGAACTTGGTCTACAGAGCAAGTTCCAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR GCA 90 bp | GAACTCAGCCCTGCCTCGGCTTCCCAAGTGCTGAGATTTCAGTTCTaGATGATCATGCCTGGCCAACCTTATGGATTTTGCTTTGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: ELSPASASQVLRFQF*MIMPGQPYGFCFAF Trigger: AAAGGCAAAGCAAAATCCATAAGGTTGGCCAGGCATGATCATGCAGAACTGAAATCTCAGCACTTGGGAAGCCGAGGCAGGGCTGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CCA 90 bp | ATACTGGCCACCTATGTCAAGGGGAGTTATCTACTGAGTACCTGCTaGCTCCATCTGGATATGGTGTCTGTAGGACAGAGAAGTAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ILATYVKGSYLLSTC*LHLDMVSVGQRSKQ Trigger: CTGCTTACTTCTCTGTCCTACAGACACCATATCCAGATGGAGCCAGCAGGTACTCAGTAGATAACTCCCCTTGACATAGGTGGCCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CCA 90 bp | GAAACAGTGACCCCAAGTTTGGTAACAAGAGGACACTTTCAGGAATaGGTTATCTCTTTACCATGGGGGTCCCAGGGATGGAACTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: ETVTPSLVTRGHFQE*VISLPWGSQGWNSG Trigger: ACCTGAGTTCCATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTTACCAAACTTGGGGTCACTGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR CCA 90 bp | TGGCTCCATCTGGATATGGTGTCTGTAGGACAGAGAAGTAAGCAGTaGGTGTTCTGTGCCACTGTCTTTATTTGCCTTGTATCTGCCACA | + |
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Preference number: 1 (lower is better) Translates to: WLHLDMVSVGQRSKQ*VFCATVFICLVSAT Trigger: TGTGGCAGATACAAGGCAAATAAAGACAGTGGCACAGAACACCCACTGCTTACTTCTCTGTCCTACAGACACCATATCCAGATGGAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CCA 90 bp | GAACACATTCATGCCAAAGTGCACAGGTGGCTTCTTGGGGACAGGTaGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: EHIHAKVHRWLLGDR*LNLISYSRNSDPKF Trigger: AAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTCCCCAAGAAGCCACCTGTGCACTTTGGCATGAATGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR TCA 90 bp | TCGTGGGTTCTGTGTCCCTGTCTTGAACCAGGGGGACACTGGCTTCTCTTTCGTTTTCATGTGTGTGTTTaGGGCTCCTCGGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SWVLCPCLEPGGHWLLFRFHVCV*GSSASW Trigger: CCAGCTGGCCGAGGAGCCTCAAACACACACATGAAA...ACGAAAGAGAAGCCAGTGTCCCCCTGGTTCAAGACAGGGACACAGAACCCACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGGGAGCACGGTCCTGCAAGAAGTTCTGGAAAGATCGAGGGTCTCATGTGTGGTCCACAGCAGCATaGGCCTGTGGCGCTGATTGT | + |
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Preference number: 2 (lower is better) Translates to: KKGARSCKKFWKDRGSHVWSTAA*ACGADC Trigger: ACAATCAGCGCCACAGGCTCATGCTGCTGTGGACCA...CACATGAGACCCTCGATCTTTCCAGAACTTCTTGCAGGACCGTGCTCCCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGGGCTCCTCGGCCAGCTaGCTTCCCTCAAGGTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMGSSAS*LPSRFN Trigger: GTTGAACCTTGAGGGAAGCCAGCTGGCCGAGGAGCC...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR GCA 90 bp | TTCACATGTATCAGCCTTGAACTCAGCCCTGCCTCGGCTTCCCAAGTGCTGAGAAACAAATGGCTGCTCTaGCGGGCTGTGGGGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: FTCISLELSPASASQVLRNKWLL*RAVGKD Trigger: ATCTTTCCCCACAGCCCGGCAGAGCAGCCATTTGTT...TCTCAGCACTTGGGAAGCCGAGGCAGGGCTGAGTTCAAGGCTGATACATGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGTGCTCTGCCGGGCTGTaGGGAAAGATCTGCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMCSAGL*GKICIP Trigger: AGGGATGCAGATCTTTCCCCACAGCCCGGCAGAGCA...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGGGGATTTTAAGCAGATaGTGTTTGGGTAGCAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: KVSSRCLNSLGHLPSSTVGILSR*CLGSSS Trigger: CGAGCTGCTACCCAAACAGCATCTGCTTAAAATCCC...CACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCGGCCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTATTTACTGCTGTGGGTaGGATTTTAAGCAGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLGQLASLKVQQNLCPELIYCCG*DFKQML Trigger: CAGCATCTGCTTAAAATCCCACCCACAGCAGTAAAT...AAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGGCCGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CAA 90 bp | CATGCCAAAGTGCACAGGTGGCTTCTTGGGGACAGGTGGCTGAACTaGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTAACAAG | + |
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Preference number: 2 (lower is better) Translates to: HAKVHRWLLGDRWLN*ISYSRNSDPKFGNK Trigger: CTTGTTACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTCCCCAAGAAGCCACCTGTGCACTTTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGCAACCTTATGGATTTTaGTTTGCCTTTAGTCTCGGT | + |
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Preference number: 2 (lower is better) Translates to: NKRTLSGMGYLFTMGVPGQPYGF*FAFSLG Trigger: ACCGAGACTAAAGGCAAAGCAAAATCCATAAGGTTG...CCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTTTGGTAACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGCTACTGAGTACCTGCTaGCTCCATCTGGATATGGTG | + |
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Preference number: 2 (lower is better) Translates to: PSLVTRGHFQEWVISLPWLLSTC*LHLDMV Trigger: CACCATATCCAGATGGAGCCAGCAGGTACTCAGTAG...CCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTTACCAAACTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGAACATTGCTGTTTTATaGGGACTCTGTGTTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMNIAVL*GLCVLF Trigger: AAAGAGAACACAGAGTCCTCATAAAACAGCAATGTT...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTATAGCCTTGGATGTCCTGGAACTTGCTCTGTAGACCAAGTTCACATGGCCACTGTCTTTATTTaGCTTGTATCTGCCACACTC | + |
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Preference number: 2 (lower is better) Translates to: SLYSLGCPGTCSVDQVHMATVFI*LVSATL Trigger: GAGTGTGGCAGATACAAGGCAAATAAAGACAGTGGC...CATGTGAACTTGGTCTACAGAGCAAGTTCCAGGACATCCAAGGCTATAAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTAACAAGGGATGTCCTGGAACTTaGTCTTCTTTCCCCGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: WLNLISYSRNSDPKFGNKGCPGT*SSFPGE Trigger: TTCCCCGGGGAAAGAAGAGCAAGTTCCAGGACATCC...CTTGTTACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120541.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTTTGGTAACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGTATCTACTGAGTACCTaGTGGCTCCATCTGGATATG | + |
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Preference number: 2 (lower is better) Translates to: PSLVTRGHFQEWVISLPWYLLST*WLHLDM Trigger: CATATCCAGATGGAGCCAGCAGGTACTCAGTAGATA...CCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTTACCAAACTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CAA 90 bp | AGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGTTGTaGTTGTTGCTTTTCAAGACTGTTTCTCTTTATAGCCTTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: RGFYFCVILLSLFLL*LLLFKTVSLYSLGC Trigger: ACATCCAAGGCTATAAAGAGAAACAGTCTTGAAAAGCAACAACAACAACAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR GCA 72 bp | CTGCTCTGCCGGGCTGTGGGGAAAGATCTGCATCCCTaGAGGTCAGCGGCTCCCCTTTCTTTCATCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LLCRAVGKDLHP*RSAAPLSFISL Trigger: GAGGGAGATGAAAGAAAGGGGAGCCGCTGACCTGCAGGGATGCAGATCTTTCCCCACAGCCCGGCAGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR TCA 72 bp | TCCCTCTTCACAGGGGAGCTCTGGTCCACAGCAGCATaGGCCTGTGGCGCTGATTGTGTCAGGGAGAGACAC | + |
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Preference number: 3 (lower is better) Translates to: SLFTGELWSTAA*ACGADCVRERH Trigger: GTGTCTCTCCCTGACACAATCAGCGCCACAGGCTCATGCTGCTGTGGACCAGAGCTCCCCTGTGAAGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR TCA 72 bp | GGAGCTCTGGTCCACAGCAGCATGAGCCTGTGGCGCTaGTTGTGTCAGGGAGAGACACCCAGGATTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: GALVHSSMSLWR*LCQGETPRIHR Trigger: TCTGTGAATCCTGGGTGTCTCTCCCTGACACAATCAGCGCCACAGGCTCATGCTGCTGTGGACCAGAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR GCA 72 bp | ACAAATGGCTGCTCTGCCGGGCTGTGGGGAAAGATCTaGATCCCTGCAGGTCAGCGGCTCCCCTTTCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: TNGCSAGLWGKI*IPAGQRLPFLS Trigger: TGAAAGAAAGGGGAGCCGCTGACCTGCAGGGATGCAGATCTTTCCCCACAGCCCGGCAGAGCAGCCATTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR GCA 72 bp | AGGGATGGAACTCAGGTTGTCAAGGTTAGTAGCAGGTaGCTTAACTCCCTGGGCCATCTTCCCAGTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: RDGTQVVKVSSR*LNSLGHLPSST Trigger: TGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTTGACAACCTGAGTTCCATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCGGCCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTCTGTCTTTATTTGCCTaGTATCTGCCACACTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LLGQLASLKVQQNLCPELLSLFA*YLPHSF Trigger: AAAGGAGTGTGGCAGATACAAGGCAAATAAAGACAG...AAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGGCCGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR GCA 72 bp | CCTGCCTCGGCTTCCCAAGTGCTGAGATTTCAGTTCTaGATGATCATGCCTGGCCAACCTTATGGATTTTGC | + |
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Preference number: 3 (lower is better) Translates to: PASASQVLRFQF*MIMPGQPYGFC Trigger: GCAAAATCCATAAGGTTGGCCAGGCATGATCATGCAGAACTGAAATCTCAGCACTTGGGAAGCCGAGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR GCA 72 bp | GGTGTTCTGTGCCACTGTCTTTATTTGCCTTGTATCTaGCACACTCCTTTGCAGAACTGGCCAGACTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: GVLCHCLYLPCI*HTPLQNWPDLW Trigger: CCACAAGTCTGGCCAGTTCTGCAAAGGAGTGTGGCAGATACAAGGCAAATAAAGACAGTGGCACAGAACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CCA 72 bp | AGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATaGGGGTCCCAGGGATGGAACTCAGGTTGTCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: RGHFQEWVISLP*GSQGWNSGCQG Trigger: ACCTTGACAACCTGAGTTCCATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR CCA 72 bp | ACCCCAAGTTTGGTAACAAGAGGACACTTTCAGGAATaGGTTATCTCTTTACCATGGGGGTCCCAGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: TPSLVTRGHFQE*VISLPWGSQGW Trigger: CCATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTTACCAAACTTGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACCTATTCTGCGTCATCCTTTaGAGTTTGTTTCTGTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: PGGHWLLFRVDRHGCSDLFCVIL*SLFLLL Trigger: CAACAACAGAAACAAACTCAAAAGGATGACGCAGAA...TAGGTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR GCA 72 bp | GATCCTATGAGGCTGCTGTGTCTAGTCCCTATTTACTaGTGTGGGTGGGATTTTAAGCAGATGCTGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: DPMRLLCLVPIY*CGWDFKQMLFG Trigger: CCCAAACAGCATCTGCTTAAAATCCCACCCACAGCAGTAAATAGGGACTAGACACAGCAGCCTCATAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR GCA 72 bp | AGTAAGCAGTGGGTGTTCTGTGCCACTGTCTTTATTTaGCTTGTATCTGCCACACTCCTTTGCAGAACTGGC | + |
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Preference number: 3 (lower is better) Translates to: SKQWVFCATVFI*LVSATLLCRTG Trigger: GCCAGTTCTGCAAAGGAGTGTGGCAGATACAAGGCAAATAAAGACAGTGGCACAGAACACCCACTGCTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CCA 72 bp | ATAATAGCCCAGAGTCTGAGAATAAGCTGTAACAAATaGCTGCTCTGCCGGGCTGTGGGGAAAGATCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: IIAQSLRISCNK*LLCRAVGKDLH Trigger: ATGCAGATCTTTCCCCACAGCCCGGCAGAGCAGCCATTTGTTACAGCTTATTCTCAGACTCTGGGCTATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR CCA 72 bp | ACCTATGTCAAGGGGAGTTATCTACTGAGTACCTGCTaGCTCCATCTGGATATGGTGTCTGTAGGACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: TYVKGSYLLSTC*LHLDMVSVGQR Trigger: TCTCTGTCCTACAGACACCATATCCAGATGGAGCCAGCAGGTACTCAGTAGATAACTCCCCTTGACATAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTGGATGTCCTGGAACTaGCTCTTCTTTCCCCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SLPKEERILLLRHPFEFVWMSWN*LFFPRG Trigger: TCCCCGGGGAAAGAAGAGCAAGTTCCAGGACATCCA...AACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120541.8 |
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| 3UTR TCA 72 bp | CAGTTCCACAGTGTTACTTTGAGATCATCCCCTAGTTaGATCCATGTGACTTCTGGTAGAGGAATACCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QFHSVTLRSSPS*IHVTSGRGIPG Trigger: CCCTGGTATTCCTCTACCAGAAGTCACATGGATTCAACTAGGGGATGATCTCAAAGTAACACTGTGGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAGTTTGGTAACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGCTTATGGATTTTGCTTaGCCTTTAGTCTCGGTAACT | + |
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Preference number: 3 (lower is better) Translates to: PSLVTRGHFQEWVISLPWLMDFA*PLVSVT Trigger: AGTTACCGAGACTAAAGGCAAAGCAAAATCCATAAG...CCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTTACCAAACTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTTTCTCTTTATAGCCTaGGATGTCCTGGAACTTGCT | + |
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Preference number: 3 (lower is better) Translates to: SLPKEERILLLRHPFEFVFLFIA*DVLELA Trigger: AGCAAGTTCCAGGACATCCAAGGCTATAAAGAGAAA...AACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| 3UTR-3UTR CAA 90 bp | GACAGGTGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTCACATTCCTAAAACATaGCTGTTTTATGAGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: DRWLNLISYSRNSDPKFGHIPKT*LFYEDS Trigger: AGAGTCCTCATAAAACAGCAATGTTTTAGGAATGTG...ACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| 3UTR GCA 72 bp | TGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTaGGTCATCCTTTTGAGTTTGTTTCTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CSLYPKKRGFYF*VILLSLFLLLL Trigger: CAACAACAACAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TGGATTAGCTGCTCAGCCTGGGCCTCGCCCGGCTTTACTGCTGGTGGTGGGACACCTTGGACTTGTCAATaGTGGTCTCGGTGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: WISCSAWASPGFTAGGGTPWTCQ*WSRCPL Trigger: AAGTGGGCACCGAGACCATCATTGACAAGTCCAAGG...TGTCCCACCACCAGCAGTAAAGCCGGGCGAGGCCCAGGCTGAGCAGCTAATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TGGATTAGCTGCTCAGCCTGGGCCTCGCCCGGCTTTACTGCTGGTGGTGGGACAAGAAGGCTCCAATCCTaGAGCCAGCCAATTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WISCSAWASPGFTAGGGTRRLQS*SQPILG Trigger: CCCAAGAATTGGCTGGCTCCAGGATTGGAGCCTTCT...TGTCCCACCACCAGCAGTAAAGCCGGGCGAGGCCCAGGCTGAGCAGCTAATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCCTCGGCTTCCCAAGTGCTGAGATTTCAGTTCTGCATGATCATGCCTGGCTCCAGTTGGCAGCATTaGAGAGGGAGGCTGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PASASQVLRFQFCMIMPGSSWQH*RGRLCR Trigger: GCGGCACAGCCTCCCTCTTCAATGCTGCCAACTGGA...GCCAGGCATGATCATGCAGAACTGAAATCTCAGCACTTGGGAAGCCGAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTCGGCCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTGTGGTGAGAGAGAAGTaGGGCCAGGCAGCCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGQLASLKVQQNLCPELVVREK*GQAAIE Trigger: CTCTATGGCTGCCTGGCCTCACTTCTCTCTCACCAC...AAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGGCCGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTCGGCCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTTCTTGGGCAGAGTGGTaGGAGAGAAGTGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGQLASLKVQQNLCPELSWAEW*ERSEAR Trigger: CCTGGCCTCACTTCTCTCTCACCACTCTGCCCAAGA...AAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGGCCGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TGGATGTCCTGGAACTTGCTCTTCTTTCCCCGGGGAATTGTTGCATGGATCTCCGGGCCCGATCAGCATTaGCACAGCCCCAGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: WMSWNLLFFPRGIVAWISGPDQH*HSPSTT Trigger: GGTGGTGCTGGGGCTGTGGCAATGCTGATCGGGCCC...GGAGATCCATGCAACAATTCCCCGGGGAAAGAAGAGCAAGTTCCAGGACATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGAAGTTCTGGAAAGATCGAGGGTCTCATGTGCATGGAGGGGCTGAGGAGGTCAGGCACAGGGAGTTaGTGTCCTCCTGGACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSSGKIEGLMCMEGLRRSGTGS*CPPGLN Trigger: GTTCAGTCCAGGAGGACATCAACTCCCTGTGCCTGA...CCTCCTCAGCCCCTCCATGCACATGAGACCCTCGATCTTTCCAGAACTTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAGGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACGCCATGTATCTGTTTTaGCCAGGGGAGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EPGGHWLLFRVDRHGCSDAMYLF*PGEQEG Trigger: TCCCTCCTGCTCCCCTGGCCAAAACAGATACATGGC...GTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCCTGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTCGGCCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTCGCCATAACAGGCGTTaGTGGTATCTATGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGQLASLKVQQNLCPELRHNRR*WYLCPR Trigger: TCGAGGGCATAGATACCACCAACGCCTGTTATGGCG...AAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGGCCGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATTCCAGTTGGCAGCATTaGAGAGGGAGGCTGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QEDTFRNGLSLYHGGPRDSSWQH*RGRLCR Trigger: GCGGCACAGCCTCCCTCTTCAATGCTGCCAACTGGA...ATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTCGGCCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTATGACAGGAAGTCATTaGACATCAACCGAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGQLASLKVQQNLCPELMTGSH*TSTEPG Trigger: CCCTGGCTCGGTTGATGTTCAATGACTTCCTGTCAT...AAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGGCCGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGCTCCATCTGGATATGGTGTCTGTAGGACAGAGAAGTAAGCAGTGGGTGCCAGCTTTAGACCCCTaGAGGCCTCTAGGCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CWLHLDMVSVGQRSKQWVPALDP*RPLGPC Trigger: ACAAGGGCCTAGAGGCCTTCAGGGGTCTAAAGCTGG...CACCCACTGCTTACTTCTCTGTCCTACAGACACCATATCCAGATGGAGCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CCA 90 bp | TTCACATGTATCAGCCTTGAACTCAGCCCTGCCTCGGCTTCCCAAGTGCTGAGAGACCATCCCAGTAGCTaGACTCCATCCAGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTCISLELSPASASQVLRDHPSS*TPSSWQ Trigger: CTGCCAACTGGATGGAGTCCAGCTACTGGGATGGTC...TCTCAGCACTTGGGAAGCCGAGGCAGGGCTGAGTTCAAGGCTGATACATGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| 3UTR CAA 72 bp | TTTACTGCTGTGGGTGGGATTTTAAGCAGATGCTGTTaGGGTAGCAGCTCGGCTCACCTTCTTTCCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTAVGGILSRCC*GSSSAHLLSPG Trigger: CCCCGGGGAAAGAAGGTGAGCCGAGCTGCTACCCAAACAGCATCTGCTTAAAATCCCACCCACAGCAGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| 3UTR CAA 72 bp | CTCTTTACCATGGGGGTCCCAGGGATGGAACTCAGGTaGTCAAGGTTAGTAGCAGGTGCCTTAACTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTMGVPGMELR*SRLVAGALTPW Trigger: CCAGGGAGTTAAGGCACCTGCTACTAACCTTGACAACCTGAGTTCCATCCCTGGGACCCCCATGGTAAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | GACCTAAGAAGGGAGCACGGTCCTGCAAGAAGTTCTGGAAAGATCGAGGGTCTCCCTTGGACTTGTCAATaGTGGTCTCGGTGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: DLRREHGPARSSGKIEGLPWTCQ*WSRCPL Trigger: AAGTGGGCACCGAGACCATCATTGACAAGTCCAAGG...GAGACCCTCGATCTTTCCAGAACTTCTTGCAGGACCGTGCTCCCTTCTTAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTTTGAGATCATCCCCGTGGTGAGAGAGAAGTaGGGCCAGGCAGCCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTPWAIFPVPQCYFEIIPVVREK*GQAAIE Trigger: CTCTATGGCTGCCTGGCCTCACTTCTCTCTCACCAC...GGGGATGATCTCAAAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTTTGAGATCATCCCCTAGTGCCATGTATCTGTTTTaGCCAGGGGAGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGPSSQFHSVTLRSSPSAMYLF*PGEQEG Trigger: TCCCTCCTGCTCCCCTGGCCAAAACAGATACATGGC...ACTAGGGGATGATCTCAAAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTCGCCATAACAGGCGTTaGTGGTATCTATGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLVAGALTPWAIFPVPQCRHNRR*WYLCPR Trigger: TCGAGGGCATAGATACCACCAACGCCTGTTATGGCG...ACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAGGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACCGAGCCAGGGATTTCTaGACCATCTTGCAAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPGGHWLLFRVDRHGCSDRARDF*TILQKG Trigger: ACCCTTTTGCAAGATGGTCCAGAAATCCCTGGCTCG...GTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCCTGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGCCTTGGTCTTCTGGTTaGACATGTCCAGGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMPWSSG*TCPGRP Trigger: AGGCCTCCCTGGACATGTTCAACCAGAAGACCAAGG...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTTTGAGATCATCCCCTAGTACCACTCGGGTAGACTaGAATGTCACCACAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGPSSQFHSVTLRSSPSTTRVD*NVTTDH Trigger: GTGGTCTGTGGTGACATTGCAGTCTACCCGAGTGGT...ACTAGGGGATGATCTCAAAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACCTAGATTCTGGATCTTCTTaGGGTAGGCTGCATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGGHWLLFRVDRHGCSDLDSGSS*GRLHSI Trigger: GATGCTATGCAGCCTACCGCAAGAAGATCCAGAATC...TAGGTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATGCTGTTTGGGTAGCAGCTCGGCTCACCTTCTTTCCCCGGGGAATTGTTCATAACAGGCGTTGGTaGTATCTATGCCCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ADAVWVAARLTFFPRGIVHNRRW*YLCPRC Trigger: ACATCGAGGGCATAGATACCACCAACGCCTGTTATG...AACAATTCCCCGGGGAAAGAAGGTGAGCCGAGCTGCTACCCAAACAGCATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CCA 90 bp | AACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGGACCATCCCAGTAGCTaGACTCCATCCAGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKRTLSGMGYLFTMGVPGDHPSS*TPSSWQ Trigger: CTGCCAACTGGATGGAGTCCAGCTACTGGGATGGTC...CCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGCACCAGTGGATACTCTaGGGCCAAGTTTGGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KVSSRCLNSLGHLPSSTVHQWIL*GQVWFV Trigger: TACAAACCAAACTTGGCCTCAGAGTATCCACTGGTG...CACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCCGTTCACCACAGAGCAGATCCTATGAGGCTGCTGTGTCTAGTCCCTATGGTTCATTATTTCTGTaGATTCCTCAGGGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: GGRSPQSRSYEAAVSSPYGSLFL*IPQGTC Trigger: GCATGTCCCCTGAGGAATTCACAGAAATAATGAACC...ATAGGGACTAGACACAGCAGCCTCATAGGATCTGCTCTGTGGTGAACGGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGCCTCGATGTCAGTGTTaGCTGAATCCTGGAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVSSRCLNSLGHLPSSTVPRCQC*LNPGTV Trigger: AACTGTTCCAGGATTCAGGCAACACTGACATCGAGG...CACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGGATTCTGGATCTTCTTaGGGTAGGCTGCATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRLVAGALTPWAIFPVPQDSGSS*GRLHSI Trigger: GATGCTATGCAGCCTACCGCAAGAAGATCCAGAATC...CTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCGGCTTCCCAAGTGCTGAGATTTCAGTTCTGCATGATCATGCCTGGCGATGCCCACATCTTTTaGCCATGTATCTGTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PASASQVLRFQFCMIMPGDAHIF*PCICFG Trigger: GCCAAAACAGATACATGGCCAAAAGATGTGGGCATC...GCCAGGCATGATCATGCAGAACTGAAATCTCAGCACTTGGGAAGCCGAGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CCA 90 bp | GACCTAAGAAGGGAGCACGGTCCTGCAAGAAGTTCTGGAAAGATCGAGGGTCTCGTGTTGCCTGAATCCTaGAACAGTTCCATGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: DLRREHGPARSSGKIEGLVLPES*NSSMST Trigger: AGTGCTCATGGAACTGTTCCAGGATTCAGGCAACAC...GAGACCCTCGATCTTTCCAGAACTTCTTGCAGGACCGTGCTCCCTTCTTAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGGAGGCCTTGGTCTTCTaGTTGAACATGTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMEALVF*LNMSRE Trigger: CTCCCTGGACATGTTCAACCAGAAGACCAAGGCCTC...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTTATAGCCTTGGATGTCCTGGAACTTGCTCTGTAGACCAAGTTCACATGGCTGCTGAGAGCAGGTaGGCAGGTGTGAGCGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLYSLGCPGTCSVDQVHMAAESR*AGVSEV Trigger: AACTTCGCTCACACCTGCTCACCTGCTCTCAGCAGC...CATGTGAACTTGGTCTACAGAGCAAGTTCCAGGACATCCAAGGCTATAAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGGGTTCATTATTTCTGTaGATTCCTCAGGGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLVAGALTPWAIFPVPQGSLFL*IPQGTC Trigger: GCATGTCCCCTGAGGAATTCACAGAAATAATGAACC...CTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTAACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCCTCCAGGGCAAGGATaGCCACATCTTTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVTRGHFQEWVISLPWGSPPGQG*PHLLAM Trigger: CATGGCCAAAAGATGTGGGCATCCTTGCCCTGGAGG...GGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTTACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTTTGAGATCATCCCCCGTTGGTGGTATCTATaGCCTCGATGTCAGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPWAIFPVPQCYFEIIPRWWYL*PRCQCC Trigger: GCAACACTGACATCGAGGGCATAGATACCACCAACG...GGGGATGATCTCAAAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTCCATCTGGATATGGTGTCTGTAGGACAGAGAAGTAAGCAGTGGGTGGTGTTGCCTGAATCCTaGAACAGTTCCATGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CWLHLDMVSVGQRSKQWVVLPES*NSSMST Trigger: AGTGCTCATGGAACTGTTCCAGGATTCAGGCAACAC...CACCCACTGCTTACTTCTCTGTCCTACAGACACCATATCCAGATGGAGCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTGGACCAGAGGGGCCTTaGGCCCGATCAGCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLYPKKRGFYFCVILLSGPEGP*ARSALP Trigger: TGGCAATGCTGATCGGGCCCAAGGCCCCTCTGGTCC...ACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATGCTGTTTGGGTAGCAGCTCGGCTCACCTTCTTTCCCCGGGGAATTGTTTGTCTACATCCTTGTTaGTGTAGGTTTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ADAVWVAARLTFFPRGIVCLHPC*CRFLPA Trigger: AGCTGGAAGAAACCTACACCAACAAGGATGTAGACA...AACAATTCCCCGGGGAAAGAAGGTGAGCCGAGCTGCTACCCAAACAGCATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGAAGGTACCAAGTACCTaGGAAGAGATTGCTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSSRCLNSLGHLPSSTVKVPST*EEIACV Trigger: GACACAAGCAATCTCTTCCCAGGTACTTGGTACCTT...CACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| 3UTR CAA 72 bp | AGCAGTGGGTGTTCTGTGCCACTGTCTTTATTTGCCTaGTATCTGCCACACTCCTTTGCAGAACTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGCSVPLSLFA*YLPHSFAELAR Trigger: TCTGGCCAGTTCTGCAAAGGAGTGTGGCAGATACAAGGCAAATAAAGACAGTGGCACAGAACACCCACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR TCA 90 bp | TTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTTTGAGATCATCCCCCACCAGTGGATACTCTaGGGCCAAGTTTGGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTPWAIFPVPQCYFEIIPHQWIL*GQVWFV Trigger: TACAAACCAAACTTGGCCTCAGAGTATCCACTGGTG...GGGGATGATCTCAAAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGTTGTTGGGCCCGATCAGCATTaGCACAGCCCCAGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KEERILLLRHPFEFVSVVGPDQH*HSPSTT Trigger: GGTGGTGCTGGGGCTGTGGCAATGCTGATCGGGCCC...AACAACAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGATTTCTGGACCATCTTaGAAAAGGGTGTGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVSSRCLNSLGHLPSSTVISGPS*KRVCGR Trigger: TCTTCCACACACCCTTTTGCAAGATGGTCCAGAAAT...CACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACCTAAGATGTTCTGTTTGTCACTaGTGGATGACAGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGHWLLFRVDRHGCSDLRCSVCH*WMTGSH Trigger: ATGACTTCCTGTCATCCAGCAGTGACAAACAGAACA...TCTTAGGTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | GACCTAAGAAGGGAGCACGGTCCTGCAAGAAGTTCTGGAAAGATCGAGGGTCTCTGTTCTGTTTGTCACTaGTGGATGACAGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLRREHGPARSSGKIEGLCSVCH*WMTGSH Trigger: ATGACTTCCTGTCATCCAGCAGTGACAAACAGAACA...GAGACCCTCGATCTTTCCAGAACTTCTTGCAGGACCGTGCTCCCTTCTTAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTTTGAGATCATCCCCCATAACAGGCGTTGGTaGTATCTATGCCCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTPWAIFPVPQCYFEIIPHNRRW*YLCPRC Trigger: ACATCGAGGGCATAGATACCACCAACGCCTGTTATG...GGGGATGATCTCAAAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATGAGGACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGGGACCAGAGGGGCCTTaGGCCCGATCAGCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYEDSVFSLPKEERILLLGPEGP*ARSALP Trigger: TGGCAATGCTGATCGGGCCCAAGGCCCCTCTGGTCC...CAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGTCCTCATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTTTTCTAAACGAGCCAGGGATTTCTaGACCATCTTGCAAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAGFPQGSTEPLSRAFSKRARDF*TILQKG Trigger: ACCCTTTTGCAAGATGGTCCAGAAATCCCTGGCTCG...TTTAGAAAAAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGGCTGCTGAGAGCAGGTaGGCAGGTGTGAGCGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YPKKRGFYFCVILLSLFLAAESR*AGVSEV Trigger: AACTTCGCTCACACCTGCTCACCTGCTCTCAGCAGC...CAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTCCAGCTTTAGACCCCTaGAGGCCTCTAGGCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLYPKKRGFYFCVILLSPALDP*RPLGPC Trigger: ACAAGGGCCTAGAGGCCTTCAGGGGTCTAAAGCTGG...ACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | GACAGGTGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTCCTTGGTCTTCTGGTTaGACATGTCCAGGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRWLNLISYSRNSDPKFGPWSSG*TCPGRP Trigger: AGGCCTCCCTGGACATGTTCAACCAGAAGACCAAGG...ACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTTGCAAAAGGGTGTGTaGAAGATCATATACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RLVAGALTPWAIFPVPQCLQKGV*KIIYCT Trigger: TGTGCAGTATATGATCTTCCACACACCCTTTTGCAA...ACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGCTGCTTCCACATTGTTaGACTTTTCCAGGTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMLLPHC*TFPGQF Trigger: AAACTGACCTGGAAAAGTTCAACAATGTGGAAGCAG...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATCTGCTTCCACATTGTTaGACTTTTCCAGGTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QEDTFRNGLSLYHGGPRDLLPHC*TFPGQF Trigger: AAACTGACCTGGAAAAGTTCAACAATGTGGAAGCAG...ATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGGATGTCCTCCTGGACTaGACAGAAGCCCATACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLYPKKRGFYFCVILLSLDVLLD*TEAHTG Trigger: ACCCGTATGGGCTTCTGTTCAGTCCAGGAGGACATC...CAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTTCAACAGAACCTCTGTCCAGAGCTTTTTCTAAAAGACAATGGAAGACTTCAGGCACAGGGAGTTaGTGTCCTCCTGGACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGSTEPLSRAFSKRQWKTSGTGS*CPPGLN Trigger: GTTCAGTCCAGGAGGACATCAACTCCCTGTGCCTGA...AGTCTTCCATTGTCTTTTAGAAAAAGCTCTGGACAGAGGTTCTGTTGAACCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTTGGGCAGAGTGGTaGGAGAGAAGTGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPKEERILLLRHPFEFVSWAEW*ERSEAR Trigger: CCTGGCCTCACTTCTCTCTCACCACTCTGCCCAAGA...AACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGCCCACGGCAGCTTTGTaGGTTCCATCAGCCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YPKKRGFYFCVILLSLFLPTAAL*VPSASV Trigger: TACAGAGGCTGATGGAACGCACAAAGCTGCCGTGGG...CAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGATTTCTGGACCATCTTaGAAAAGGGTGTGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMISGPS*KRVCGR Trigger: TCTTCCACACACCCTTTTGCAAGATGGTCCAGAAAT...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGTGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTAGAAGGCTCCAATCCTaGAGCCAGCCAATTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRWLNLISYSRNSDPKFGRRLQS*SQPILG Trigger: CCCAAGAATTGGCTGGCTCCAGGATTGGAGCCTTCT...ACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| 3UTR CAA 72 bp | GTGCACAGGTGGCTTCTTGGGGACAGGTGGCTGAACTaGATTTCTTATAGTAGAAACAGTGACCCCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHRWLLGDRWLN*ISYSRNSDPKF Trigger: AAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTCCCCAAGAAGCCACCTGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTCCTCCAGGGCAAGGATaGCCACATCTTTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLPKEERILLLRHPFEFVPPGQG*PHLLAM Trigger: CATGGCCAAAAGATGTGGGCATCCTTGCCCTGGAGG...AACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCATCTGGATATGGTGTCTGTAGGACAGAGAAGTAAGCAGTGGGTGTTCCACTGTATACTTCCCTaGTTCCACATTGTTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: WLHLDMVSVGQRSKQWVFHCILP*FHIVEL Trigger: AAGTTCAACAATGTGGAAGCAGGGAAGTATACAGTG...GAACACCCACTGCTTACTTCTCTGTCCTACAGACACCATATCCAGATGGAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGCACTGTATACTTCCCTaGTTCCACATTGTTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMHCILP*FHIVEL Trigger: AAGTTCAACAATGTGGAAGCAGGGAAGTATACAGTG...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | CTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTAAGCCCATACGGGTCTaGCCCAAGCCCACTGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LYPKKRGFYFCVILLSLFKPIRV*PKPTVY Trigger: GTATACAGTGGGCTTGGGCCAGACCCGTATGGGCTT...AAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCATCTGGATATGGTGTCTGTAGGACAGAGAAGTAAGCAGTGGGTGTTCTTGCAAAAGGGTGTGTaGAAGATCATATACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WLHLDMVSVGQRSKQWVFLQKGV*KIIYCT Trigger: TGTGCAGTATATGATCTTCCACACACCCTTTTGCAA...GAACACCCACTGCTTACTTCTCTGTCCTACAGACACCATATCCAGATGGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| 3UTR CAA 72 bp | TGTTGTTGCTTTTCAAGACTGTTTCTCTTTATAGCCTaGGATGTCCTGGAACTTGCTCTTCTTTCCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCCFSRLFLFIA*DVLELALLSPG Trigger: CCCCGGGGAAAGAAGAGCAAGTTCCAGGACATCCAAGGCTATAAAGAGAAACAGTCTTGAAAAGCAACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120541.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTATGACAGGAAGTCATTaGACATCAACCGAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSLYPKKRGFYFCVILLSMTGSH*TSTEPG Trigger: CCCTGGCTCGGTTGATGTTCAATGACTTCCTGTCAT...ACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGTGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTCCTCGATGTCAGTGTTaGCTGAATCCTGGAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DRWLNLISYSRNSDPKFGPRCQC*LNPGTV Trigger: AACTGTTCCAGGATTCAGGCAACACTGACATCGAGG...ACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATGAGGACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGACCACTCGGGTAGACTaGAATGTCACCACAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FYEDSVFSLPKEERILLLTTRVD*NVTTDH Trigger: GTGGTCTGTGGTGACATTGCAGTCTACCCGAGTGGT...CAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGTCCTCATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGTTGTTAAGCCCATACGGGTCTaGCCCAAGCCCACTGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: KEERILLLRHPFEFVSVVKPIRV*PKPTVY Trigger: GTATACAGTGGGCTTGGGCCAGACCCGTATGGGCTT...AACAACAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTAACAAGGAGGCCTTGGTCTTCTaGTTGAACATGTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLNLISYSRNSDPKFGNKEALVF*LNMSRE Trigger: CTCCCTGGACATGTTCAACCAGAAGACCAAGGCCTC...CTTGTTACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTTCAACAGAACCTCTGTCCAGAGCTTTTTCTAAAAGACAATGGAAGACTGCTTGTGTCTCCAGGTaGAGAGAAGTTCACCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSTEPLSRAFSKRQWKTACVSR*REVHLV Trigger: CACAAGGTGAACTTCTCTCCACCTGGAGACACAAGC...AGTCTTCCATTGTCTTTTAGAAAAAGCTCTGGACAGAGGTTCTGTTGAACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTGCTTGTGTCTCCAGGTaGAGAGAAGTTCACCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLYPKKRGFYFCVILLSACVSR*REVHLV Trigger: CACAAGGTGAACTTCTCTCCACCTGGAGACACAAGC...ACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATGAGGACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTTGGTGGTATCTATaGCCTCGATGTCAGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYEDSVFSLPKEERILLLRWWYL*PRCQCC Trigger: GCAACACTGACATCGAGGGCATAGATACCACCAACG...CAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGTCCTCATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| 3UTR CAA 72 bp | CCTTTGCTTGTGCCCAATGCTCACATTCCTAAAACATaGCTGTTTTATGAGGACTCTGTGTTCTCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLVPNAHIPKT*LFYEDSVFSLP Trigger: GGGTAAAGAGAACACAGAGTCCTCATAAAACAGCAATGTTTTAGGAATGTGAGCATTGGGCACAAGCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGTTGTTGTCCACATATTGGGCTaGAAAATAGACCTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEERILLLRHPFEFVSVVVHILG*KIDLQG Trigger: GCCCTGGAGGTCTATTTTCCAGCCCAATATGTGGAC...AACAACAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGAAGGTACCAAGTACCTaGGAAGAGATTGCTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YPKKRGFYFCVILLSLFLKVPST*EEIACV Trigger: GACACAAGCAATCTCTTCCCAGGTACTTGGTACCTT...CAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATGAGGACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGGATGCCCACATCTTTTaGCCATGTATCTGTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYEDSVFSLPKEERILLLDAHIF*PCICFG Trigger: GCCAAAACAGATACATGGCCAAAAGATGTGGGCATC...CAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGTCCTCATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGTTGTTGTTGTTTTCCAGGTCAGTTTaGTCCACATATTGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRGFYFCVILLSLFLLLLFSRSV*STYWAG Trigger: TCCAGCCCAATATGTGGACCAAACTGACCTGGAAAA...CAACAACAACAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATGAGGACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGTGTCTACATCCTTGTTaGTGTAGGTTTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FYEDSVFSLPKEERILLLCLHPC*CRFLPA Trigger: AGCTGGAAGAAACCTACACCAACAAGGATGTAGACA...CAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGTCCTCATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 90 bp | GGGCCTTGGGCCCGATCAGCATTGCCACAGCCCCAGCACCACCTGTaGGGCGGGCGTTACCACTCGGGTAGACTGCAATGTCACCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPWARSALPQPQHHL*GGRYHSGRLQCHHR Trigger: TCTGTGGTGACATTGCAGTCTACCCGAGTGGTAACGCCCGCCCCACAGGTGGTGCTGGGGCTGTGGCAATGCTGATCGGGCCCAAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 90 bp | AGCCCCAGCACCACCTGTGGGGCGGGCGTTACCACTCGGGTAGACTaGAATGTCACCACAGACCACCAGGGCATAGCGACCATCCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPSTTCGAGVTTRVD*NVTTDHQGIATIPV Trigger: TACTGGGATGGTCGCTATGCCCTGGTGGTCTGTGGTGACATTGCAGTCTACCCGAGTGGTAACGCCCGCCCCACAGGTGGTGCTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 90 bp | GGCCAGGGGAGCAGGAGGGATTGTAGAAAACCTCTGCTGGGCTGCTaGGAGCAGGTGAGCAGGTGTGAGCGAAGTTTCCTGCATCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQGSRRDCRKPLLGC*EQVSRCERSFLHRS Trigger: AGAGCGATGCAGGAAACTTCGCTCACACCTGCTCACCTGCTCTCAGCAGCCCAGCAGAGGTTTTCTACAATCCCTCCTGCTCCCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TGGATTAGCTGCTCAGCCTGGGCCTCGCCCGGCTTTACTGCTGGTGGTGGGACACCCTCGATGTCAGTGTaGCCTGAATCCTGGAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: WISCSAWASPGFTAGGGTPSMSV*PESWNS Trigger: ACTGTTCCAGGATTCAGGCAACACTGACATCGAGGG...TGTCCCACCACCAGCAGTAAAGCCGGGCGAGGCCCAGGCTGAGCAGCTAATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCGGGCTGTGGGGAAAGATCTGCATCCCTGCAGGTCAGCGGCTCCCCTTAGTTTGGTCCACATATaGGGCTGGAAAATAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCRAVGKDLHPCRSAAPLSLVHI*GWKIDL Trigger: GAGGTCTATTTTCCAGCCCAATATGTGGACCAAACT...AAGGGGAGCCGCTGACCTGCAGGGATGCAGATCTTTCCCCACAGCCCGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGAGGACCAGAGGGGCCTaGGGCCCGATCAGCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMRTRGA*GPISIA Trigger: GGCAATGCTGATCGGGCCCAAGGCCCCTCTGGTCCT...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGATCCAGTTGGCAGCATaGAAGAGGGAGGCTGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KVSSRCLNSLGHLPSSTVIQLAA*KREAVP Trigger: CGGCACAGCCTCCCTCTTCAATGCTGCCAACTGGAT...CACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 90 bp | AGAAACTTGCTGCTAAGCCTGAGCCGTAGGAGAAGGCTCCAATCCTaGAGCCAGCCAATTCTTGGGCAGAGTGGTGAGAGAGAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNLLLSLSRRRRLQS*SQPILGQSGEREVR Trigger: CCTCACTTCTCTCTCACCACTCTGCCCAAGAATTGGCTGGCTCCAGGATTGGAGCCTTCTCCTACGGCTCAGGCTTAGCAGCAAGTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAGAGCTCTTCGTGGGTTCTGTGTCCCTGTCTTGAACCAGGGTTGACAGCCTTGGACTaGTCAATGATGGTCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESSSWVLCPCLEPGLTALD*SMMVSV Trigger: CACCGAGACCATCATTGACAAGTCCAAGGCTGTCAA...CCCTGGTTCAAGACAGGGACACAGAACCCACGAAGAGCTCTCTGCAGGGTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGGAGCACGGTCCTGCAAGAAGTTCTGGAAAGATCGAGGGTCTCATGTGGGAGCCAGCCAATTCTaGGGCAGAGTGGTGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKGARSCKKFWKDRGSHVGASQF*GRVVRE Trigger: CTCTCTCACCACTCTGCCCAAGAATTGGCTGGCTCC...CACATGAGACCCTCGATCTTTCCAGAACTTCTTGCAGGACCGTGCTCCCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCGGGCTGTGGGGAAAGATCTGCATCCCTGCAGGTCAGCGGCTCCCCTTCACCTTGTGGTAAAATaGCTCTCTCTGGTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LCRAVGKDLHPCRSAAPLHLVVK*LSLVHY Trigger: ATAATGAACCAGAGAGAGCAATTTTACCACAAGGTG...AAGGGGAGCCGCTGACCTGCAGGGATGCAGATCTTTCCCCACAGCCCGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS GCA 90 bp | AAGGCTGGTTGTTTCCAGCTTGCTTCCACTGATTCTGGATCTTCTTaGGGTAGGCTGCATAGCATCGATCCAAGGCCCGCAGGTAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KAGCFQLASTDSGSS*GRLHSIDPRPAGST Trigger: AGTGCTACCTGCGGGCCTTGGATCGATGCTATGCAGCCTACCGCAAGAAGATCCAGAATCAGTGGAAGCAAGCTGGAAACAACCAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGCTGGGAAGAGATTGCTaGTGTCTCCAGGTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRLVAGALTPWAIFPVPQLGRDC*CLQVER Trigger: TCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAG...CTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACCTAAGAGTACCTGGGAAGAGATaGCTTGTGTCTCCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGHWLLFRVDRHGCSDLRVPGKR*LVSPGG Trigger: TCCACCTGGAGACACAAGCAATCTCTTCCCAGGTAC...TCTTAGGTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGTTTGGTAACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGAGTTCCCCTCAGCCCTaGCTCGAGGACCAGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLVTRGHFQEWVISLPWSSPQP*LEDQRG Trigger: GCCCCTCTGGTCCTCGAGCAAGGGCTGAGGGGAACT...CCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTTACCAAACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACCTACTGGTTGTTTCCAGCTaGCTTCCACTGATTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGGHWLLFRVDRHGCSDLLVVSS*LPLILD Trigger: ATCCAGAATCAGTGGAAGCAAGCTGGAAACAACCAG...TAGGTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | GAACCAGGGGGACACTGGCTTCTCTTTCGTGTAGACAGACATGGCTGCAGTGACGATTTCTGGACCATCTaGCAAAAGGGTGTGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EPGGHWLLFRVDRHGCSDDFWTI*QKGVWK Trigger: CTTCCACACACCCTTTTGCAAGATGGTCCAGAAATC...GTCACTGCAGCCATGTCTGTCTACACGAAAGAGAAGCCAGTGTCCCCCTGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 90 bp | CAGGTAGCACTGGATAGACAGCTTCCCATCCACCAGTGGATACTCTaGGGCCAAGTTTGGTTTGTAGAAGTCGTACGCGTTCTCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVALDRQLPIHQWIL*GQVWFVEVVRVLHV Trigger: CACATGGAGAACGCGTACGACTTCTACAAACCAAACTTGGCCTCAGAGTATCCACTGGTGGATGGGAAGCTGTCTATCCAGTGCTACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGGGTTCTGTGTCCCTGTCTTGAACCAGGGGGACACTGGCTTCTCTTTCGTAGTTTGGTCCACATATaGGGCTGGAAAATAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWVLCPCLEPGGHWLLFRSLVHI*GWKIDL Trigger: GAGGTCTATTTTCCAGCCCAATATGTGGACCAAACT...ACGAAAGAGAAGCCAGTGTCCCCCTGGTTCAAGACAGGGACACAGAACCCACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | GACCTAAGAAGGGAGCACGGTCCTGCAAGAAGTTCTGGAAAGATCGAGGGTCTCTCCATGAGCACTGTTTaGACAGCCTTGGACTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLRREHGPARSSGKIEGLSMSTV*TALDLS Trigger: TGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGA...GAGACCCTCGATCTTTCCAGAACTTCTTGCAGGACCGTGCTCCCTTCTTAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTCCATGAGCACTGTTTaGACAGCCTTGGACTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLVAGALTPWAIFPVPQCSMSTV*TALDLS Trigger: TGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGA...ACACTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATCCCTCGATGTCAGTGTaGCCTGAATCCTGGAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QEDTFRNGLSLYHGGPRDPSMSV*PESWNS Trigger: ACTGTTCCAGGATTCAGGCAACACTGACATCGAGGG...ATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGTTCAACAGAACCTCTGTCCAGAGCTTTTTCTAAAAGACAATGGAAGACTTGGGCCCGATCAGCATaGCCACAGCCCCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGSTEPLSRAFSKRQWKTWARSA*PQPQHH Trigger: GTGGTGCTGGGGCTGTGGCAATGCTGATCGGGCCCA...AGTCTTCCATTGTCTTTTAGAAAAAGCTCTGGACAGAGGTTCTGTTGAACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TTCACATGTATCAGCCTTGAACTCAGCCCTGCCTCGGCTTCCCAAGTGCTGAGAGATTTCTGGACCATCTaGCAAAAGGGTGTGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTCISLELSPASASQVLRDFWTI*QKGVWK Trigger: CTTCCACACACCCTTTTGCAAGATGGTCCAGAAATC...TCTCAGCACTTGGGAAGCCGAGGCAGGGCTGAGTTCAAGGCTGATACATGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CAA 90 bp | AACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGCTGGGAAGAGATTGCTaGTGTCTCCAGGTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NKRTLSGMGYLFTMGVPGLGRDC*CLQVER Trigger: TCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAG...CCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 90 bp | GCGTTGGTGGTATCTATGCCCTCGATGTCAGTGTTGCCTGAATCCTaGAACAGTTCCATGAGCACTGTTTTGACAGCCTTGGACTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALVVSMPSMSVLPES*NSSMSTVLTALDLS Trigger: TGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTTCCAGGATTCAGGCAACACTGACATCGAGGGCATAGATACCACCAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 90 bp | CTTCCTGCGATGCATCTCATCCACTCGTTCAAGGTACCAAGTACCTaGGAAGAGATTGCTTGTGTCTCCAGGTGGAGAGAAGTTCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPAMHLIHSFKVPST*EEIACVSRWREVHL Trigger: AAGGTGAACTTCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAGGTACTTGGTACCTTGAACGAGTGGATGAGATGCATCGCAGGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATGAGGACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGTGGGCCCGATCAGCATaGCCACAGCCCCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: FYEDSVFSLPKEERILLLWARSA*PQPQHH Trigger: GTGGTGCTGGGGCTGTGGCAATGCTGATCGGGCCCA...CAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGTCCTCATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATGAGGACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGAGGACCAGAGGGGCCTaGGGCCCGATCAGCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FYEDSVFSLPKEERILLLRTRGA*GPISIA Trigger: GGCAATGCTGATCGGGCCCAAGGCCCCTCTGGTCCT...CAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGTCCTCATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTAGTTCCCCTCAGCCCTaGCTCGAGGACCAGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYPKKRGFYFCVILLSLFSSPQP*LEDQRG Trigger: GCCCCTCTGGTCCTCGAGCAAGGGCTGAGGGGAACT...AAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCTGGGCCATCTTCCCAGTTCCACAGTGTTACTTTGAGATCATCCCCTAGTACTCTGAGGCCAAGTTaGGTTTGTAGAAGTCGTACG | + |
|
Preference number: 5 (lower is better) Translates to: LPGPSSQFHSVTLRSSPSTLRPS*VCRSRT Trigger: CGTACGACTTCTACAAACCAAACTTGGCCTCAGAGT...ACTAGGGGATGATCTCAAAGTAACACTGTGGAACTGGGAAGATGGCCCAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 90 bp | ATAACAGGCGTTGGTGGTATCTATGCCCTCGATGTCAGTGTTGCCTaGATCCTGGAACAGTTCCATGAGCACTGTTTTGACAGCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ITGVGGIYALDVSVA*ILEQFHEHCFDSLG Trigger: TCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTTCCAGGATTCAGGCAACACTGACATCGAGGGCATAGATACCACCAACGCCTGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 90 bp | TCCCATTATTTGTGGAGAGGTAAAGGGAGGCCTTGGTCTTCTGGTTaGACATGTCCAGGGAGGCCTTCAAAAGAGCCTTGTCTACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHYLWRGKGRPWSSG*TCPGRPSKEPCLHP Trigger: AGGATGTAGACAAGGCTCTTTTGAAGGCCTCCCTGGACATGTTCAACCAGAAGACCAAGGCCTCCCTTTACCTCTCCACAAATAATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 90 bp | ATCAACCGAGCCAGGGATTTCTGGACCATCTTGCAAAAGGGTGTGTaGAAGATCATATACTGCACATCATCGAGGGTGAAAGGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: INRARDFWTILQKGV*KIIYCTSSRVKGWL Trigger: CAACCAGCCTTTCACCCTCGATGATGTGCAGTATATGATCTTCCACACACCCTTTTGCAAGATGGTCCAGAAATCCCTGGCTCGGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGCTCCATCTGGATATGGTGTCTGTAGGACAGAGAAGTAAGCAGTGGGTGCCTGCTTCCACATTGTaGAACTTTTCCAGGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CWLHLDMVSVGQRSKQWVPASTL*NFSRSV Trigger: AACTGACCTGGAAAAGTTCAACAATGTGGAAGCAGG...CACCCACTGCTTACTTCTCTGTCCTACAGACACCATATCCAGATGGAGCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCTGGCTTCCCTCAAGGTTCAACAGAACCTCTGTCCAGAGCTTTTTCTAAATTGACAGCCTTGGACTaGTCAATGATGGTCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAGFPQGSTEPLSRAFSKLTALD*SMMVSV Trigger: CACCGAGACCATCATTGACAAGTCCAAGGCTGTCAA...TTTAGAAAAAGCTCTGGACAGAGGTTCTGTTGAACCTTGAGGGAAGCCAGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | GCCGTTCACCACAGAGCAGATCCTATGAGGCTGCTGTGTCTAGTCCCTATTTACACTGTTTTGACAGCCTaGGACTTGTCAATGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVHHRADPMRLLCLVPIYTVLTA*DLSMMV Trigger: GACCATCATTGACAAGTCCAAGGCTGTCAAAACAGT...GTAAATAGGGACTAGACACAGCAGCCTCATAGGATCTGCTCTGTGGTGAACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CAA 90 bp | AGACATGGCTGCAGTGACCTAAGAAGGGAGCACGGTCCTGCAAGAAGTTCTGGATATAAGTTGTTCTGTTaGTCACTGCTGGATGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RHGCSDLRREHGPARSSGYKLFC*SLLDDR Trigger: CCTGTCATCCAGCAGTGACAAACAGAACAACTTATA...TCCAGAACTTCTTGCAGGACCGTGCTCCCTTCTTAGGTCACTGCAGCCATGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTTAGTAGCAGGTGCCTTAACTCCCTGGGCCATCTTCCCAGTTCCACAGTATAAGTTGTTCTGTTaGTCACTGCTGGATGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLVAGALTPWAIFPVPQYKLFC*SLLDDR Trigger: CCTGTCATCCAGCAGTGACAAACAGAACAACTTATA...CTGTGGAACTGGGAAGATGGCCCAGGGAGTTAAGGCACCTGCTACTAACCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGTGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTGCCTTGGTCTTCTGGTaGAACATGTCCAGGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRWLNLISYSRNSDPKFGALVFW*NMSREA Trigger: GGCCTCCCTGGACATGTTCAACCAGAAGACCAAGGC...ACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCACCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | AACAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGGGAATGAAAAGAAACTaGCTGCTAAGCCTGAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NKRTLSGMGYLFTMGVPGGMKRN*LLSLSR Trigger: ACGGCTCAGGCTTAGCAGCAAGTTTCTTTTCATTCC...CCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGAAGTTCTGGAAAGATCGAGGGTCTCATGTGCATGGAGGGGCTGAGGAGGCACCTTGTGGTAAAATaGCTCTCTCTGGTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: ARSSGKIEGLMCMEGLRRHLVVK*LSLVHY Trigger: ATAATGAACCAGAGAGAGCAATTTTACCACAAGGTG...CCTCCTCAGCCCCTCCATGCACATGAGACCCTCGATCTTTCCAGAACTTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATGTTCCCTGCTTCCACATaGTTGAACTTTTCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRTLSGMGYLFTMGVPGMFPAST*LNFSRS Trigger: TGACCTGGAAAAGTTCAACAATGTGGAAGCAGGGAA...CATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGACACTTTCAGGAATGGGTTATCTCTTTACCATGGGGGTCCCAGGGATACTGTTTTGACAGCCTaGGACTTGTCAATGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QEDTFRNGLSLYHGGPRDTVLTA*DLSMMV Trigger: GACCATCATTGACAAGTCCAAGGCTGTCAAAACAGT...ATCCCTGGGACCCCCATGGTAAAGAGATAACCCATTCCTGAAAGTGTCCTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGATCCAGTTGGCAGCATaGAAGAGGGAGGCTGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YPKKRGFYFCVILLSLFLIQLAA*KREAVP Trigger: CGGCACAGCCTCCCTCTTCAATGCTGCCAACTGGAT...CAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGGCCTTGGTCTTCTGGTaGAACATGTCCAGGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YPKKRGFYFCVILLSLFLALVFW*NMSREA Trigger: GGCCTCCCTGGACATGTTCAACCAGAAGACCAAGGC...CAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTGGAGCCAGCCAATTCTaGGGCAGAGTGGTGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLYPKKRGFYFCVILLSGASQF*GRVVRE Trigger: CTCTCTCACCACTCTGCCCAAGAATTGGCTGGCTCC...ACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 90 bp | TGCAAAAGGGTGTGTGGAAGATCATATACTGCACATCATCGAGGGTaGAAGGCTGGTTGTTTCCAGCTTGCTTCCACTGATTCTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: CKRVCGRSYTAHHRG*KAGCFQLASTDSGS Trigger: AGATCCAGAATCAGTGGAAGCAAGCTGGAAACAACCAGCCTTTCACCCTCGATGATGTGCAGTATATGATCTTCCACACACCCTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 90 bp | TGTCTACATCCTTGTTGGTGTAGGTTTCTTCCAGCTTTAGACCCCTaGAGGCCTCTAGGCCCTTGTATAAGTTGTTCTGTTTGTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLHPCWCRFLPALDP*RPLGPCISCSVCHC Trigger: GCAGTGACAAACAGAACAACTTATACAAGGGCCTAGAGGCCTTCAGGGGTCTAAAGCTGGAAGAAACCTACACCAACAAGGATGTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 90 bp | AGTTCACCTTGTGGTAAAATTGCTCTCTCTGGTTCATTATTTCTGTaGATTCCTCAGGGGACATGCGTCTCCGGGAGTCTAGACGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPCGKIALSGSLFL*IPQGTCVSGSLDVW Trigger: CCAAACGTCTAGACTCCCGGAGACGCATGTCCCCTGAGGAATTCACAGAAATAATGAACCAGAGAGAGCAATTTTACCACAAGGTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 90 bp | GCATCTCATCCACTCGTTCAAGGTACCAAGTACCTGGGAAGAGATTaGTTGTGTCTCCAGGTGGAGAGAAGTTCACCTTGTGGTAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: ASHPLVQGTKYLGRD*LCLQVERSSPCGKI Trigger: AATTTTACCACAAGGTGAACTTCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAGGTACTTGGTACCTTGAACGAGTGGATGAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTGTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTCTTTTCCAGGTCAGTTaGGTCCACATATTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLCSLYPKKRGFYFCVILLFQVS*VHILGW Trigger: CCAGCCCAATATGTGGACCAAACTGACCTGGAAAAG...AAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACACAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TATAGCCTTGGATGTCCTGGAACTTGCTCTGTAGACCAAGTTCACATGTATCAGACTCTGAGGCCAAGTTaGGTTTGTAGAAGTCGTACG | + |
|
Preference number: 5 (lower is better) Translates to: YSLGCPGTCSVDQVHMYQTLRPS*VCRSRT Trigger: CGTACGACTTCTACAAACCAAACTTGGCCTCAGAGT...CTGATACATGTGAACTTGGTCTACAGAGCAAGTTCCAGGACATCCAAGGCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090746.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGGCCTTCAAAAGAGCCTaGTCTACATCCTTGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFSLPKEERILLLRHPFEAFKRA*STSLLV Trigger: CACCAACAAGGATGTAGACAAGGCTCTTTTGAAGGC...CTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTAACAAGCTTTTCCAGGTCAGTTaGGTCCACATATTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLNLISYSRNSDPKFGNKLFQVS*VHILGW Trigger: CCAGCCCAATATGTGGACCAAACTGACCTGGAAAAG...CTTGTTACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGCTGGTTGTTTCCAGCTaGCTTCCACTGATTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLYPKKRGFYFCVILLSLLVVSS*LPLILD Trigger: ATCCAGAATCAGTGGAAGCAAGCTGGAAACAACCAG...CAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTTCTGTTGTTGTACCTGGGAAGAGATaGCTTGTGTCTCCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KEERILLLRHPFEFVSVVVPGKR*LVSPGG Trigger: TCCACCTGGAGACACAAGCAATCTCTTCCCAGGTAC...AACAACAGAAACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTCCCTGCTTCCACATaGTTGAACTTTTCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLYPKKRGFYFCVILLSLFPAST*LNFSRS Trigger: TGACCTGGAAAAGTTCAACAATGTGGAAGCAGGGAA...CAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTGAACTTGATTTCTTATAGTAGAAACAGTGACCCCAAGTTTGGTAACAAGGCCTTCAAAAGAGCCTaGTCTACATCCTTGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WLNLISYSRNSDPKFGNKAFKRA*STSLLV Trigger: CACCAACAAGGATGTAGACAAGGCTCTTTTGAAGGC...CTTGTTACCAAACTTGGGGTCACTGTTTCTACTATAAGAAATCAAGTTCAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTACCCAAAGAAGAGAGGATTCTACTTCTGCGTCATCCTTTTGAGTTTGTTGGAATGAAAAGAAACTaGCTGCTAAGCCTGAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPKEERILLLRHPFEFVGMKRN*LLSLSR Trigger: ACGGCTCAGGCTTAGCAGCAAGTTTCTTTTCATTCC...AACAAACTCAAAAGGATGACGCAGAAGTAGAATCCTCTCTTCTTTGGGTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 72 bp | ACCACCTGTGGGGCGGGCGTTACCACTCGGGTAGACTaGAATGTCACCACAGACCACCAGGGCATAGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: TTCGAGVTTRVD*NVTTDHQGIAT Trigger: GGTCGCTATGCCCTGGTGGTCTGTGGTGACATTGCAGTCTACCCGAGTGGTAACGCCCGCCCCACAGGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | TCTCGGTGCCCACTTCCAGACGGCCCACAGCATCCCACGGCAGCTTaGTGCGTTCCATCAGCCTCTGTACCACTGTCAGGCACAGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRCPLPDGPQHPTAA*CVPSASVPLSGTGS Trigger: ACTCCCTGTGCCTGACAGTGGTACAGAGGCTGATGGAACGCACAAAGCTGCCGTGGGATGCTGTGGGCCGTCTGGAAGTGGGCACCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | CCACTTCCAGACGGCCCACAGCATCCCACGGCAGCTTaGTGCGTTCCATCAGCCTCTGTACCACTGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLPDGPQHPTAA*CVPSASVPLSG Trigger: GCCTGACAGTGGTACAGAGGCTGATGGAACGCACAAAGCTGCCGTGGGATGCTGTGGGCCGTCTGGAAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 72 bp | CTTCCAGACGGCCCACAGCATCCCACGGCAGCTTTGTaGGTTCCATCAGCCTCTGTACCACTGTCAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPDGPQHPTAAL*VPSASVPLSGT Trigger: TGTGCCTGACAGTGGTACAGAGGCTGATGGAACGCACAAAGCTGCCGTGGGATGCTGTGGGCCGTCTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 72 bp | CTGCTAAGCCTGAGCCGTAGGAGAAGGCTCCAATCCTaGAGCCAGCCAATTCTTGGGCAGAGTGGTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSLSRRRRLQS*SQPILGQSGER Trigger: TCTCTCACCACTCTGCCCAAGAATTGGCTGGCTCCAGGATTGGAGCCTTCTCCTACGGCTCAGGCTTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | GGGAACCTGGGGAAGCATCCTTGGACACTCGGAATGAAAAGAAACTaGCTGCTAAGCCTGAGCCGTAGGAGAAGGCTCCAATCCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GNLGKHPWTLGMKRN*LLSLSRRRRLQSWS Trigger: GCTCCAGGATTGGAGCCTTCTCCTACGGCTCAGGCTTAGCAGCAAGTTTCTTTTCATTCCGAGTGTCCAAGGATGCTTCCCCAGGTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 72 bp | AGGCTGTGCCGCCATAACAGGCGTTGGTGGTATCTATaGCCTCGATGTCAGTGTTGCCTGAATCCTGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: RLCRHNRRWWYL*PRCQCCLNPGT Trigger: TGTTCCAGGATTCAGGCAACACTGACATCGAGGGCATAGATACCACCAACGCCTGTTATGGCGGCACAGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | GAATCCTGGAACAGTTCCATGAGCACTGTTTTGACAGCCTTGGACTaGTCAATGATGGTCTCGGTGCCCACTTCCAGACGGCCCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ESWNSSMSTVLTALD*SMMVSVPTSRRPTA Trigger: TGCTGTGGGCCGTCTGGAAGTGGGCACCGAGACCATCATTGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTTCCAGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | TTGCCTGAATCCTGGAACAGTTCCATGAGCACTGTTTTGACAGCCTaGGACTTGTCAATGATGGTCTCGGTGCCCACTTCCAGACGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPESWNSSMSTVLTA*DLSMMVSVPTSRRP Trigger: GGGCCGTCTGGAAGTGGGCACCGAGACCATCATTGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTTCCAGGATTCAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 72 bp | TGTTTCCAGCTTGCTTCCACTGATTCTGGATCTTCTTaGGGTAGGCTGCATAGCATCGATCCAAGGCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: CFQLASTDSGSS*GRLHSIDPRPA Trigger: TGCGGGCCTTGGATCGATGCTATGCAGCCTACCGCAAGAAGATCCAGAATCAGTGGAAGCAAGCTGGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 72 bp | TTGTGGAGAGGTAAAGGGAGGCCTTGGTCTTCTGGTTaGACATGTCCAGGGAGGCCTTCAAAAGAGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LWRGKGRPWSSG*TCPGRPSKEPC Trigger: ACAAGGCTCTTTTGAAGGCCTCCCTGGACATGTTCAACCAGAAGACCAAGGCCTCCCTTTACCTCTCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | AACAGTTCCATGAGCACTGTTTTGACAGCCTTGGACTaGTCAATGATGGTCTCGGTGCCCACTTCCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: NSSMSTVLTALD*SMMVSVPTSRR Trigger: CCGTCTGGAAGTGGGCACCGAGACCATCATTGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | TCCTGGAACAGTTCCATGAGCACTGTTTTGACAGCCTaGGACTTGTCAATGATGGTCTCGGTGCCCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SWNSSMSTVLTA*DLSMMVSVPTS Trigger: GGAAGTGGGCACCGAGACCATCATTGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | CAGGCGTTGGTGGTATCTATGCCCTCGATGTCAGTGTaGCCTGAATCCTGGAACAGTTCCATGAGCACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: QALVVSMPSMSV*PESWNSSMSTV Trigger: AACAGTGCTCATGGAACTGTTCCAGGATTCAGGCAACACTGACATCGAGGGCATAGATACCACCAACGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | CACATCATCGAGGGTGAAAGGCTGGTTGTTTCCAGCTaGCTTCCACTGATTCTGGATCTTCTTGCGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HIIEGERLVVSS*LPLILDLLAVG Trigger: GCCTACCGCAAGAAGATCCAGAATCAGTGGAAGCAAGCTGGAAACAACCAGCCTTTCACCCTCGATGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | GGGAAGCATCCTTGGACACTCGGAATGAAAAGAAACTaGCTGCTAAGCCTGAGCCGTAGGAGAAGGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GKHPWTLGMKRN*LLSLSRRRRLQ Trigger: TTGGAGCCTTCTCCTACGGCTCAGGCTTAGCAGCAAGTTTCTTTTCATTCCGAGTGTCCAAGGATGCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | ATGTCAGTGTTGCCTGAATCCTGGAACAGTTCCATGAGCACTGTTTaGACAGCCTTGGACTTGTCAATGATGGTCTCGGTGCCCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: MSVLPESWNSSMSTV*TALDLSMMVSVPTS Trigger: GGAAGTGGGCACCGAGACCATCATTGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTTCCAGGATTCAGGCAACACTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 72 bp | CATACGGGTCTGGCCCAAGCCCACTGTATACTTCCCTaGTTCCACATTGTTGAACTTTTCCAGGTCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HTGLAQAHCILP*FHIVELFQVSL Trigger: CAAACTGACCTGGAAAAGTTCAACAATGTGGAAGCAGGGAAGTATACAGTGGGCTTGGGCCAGACCCGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS GCA 72 bp | CCACTCGTTCAAGGTACCAAGTACCTGGGAAGAGATTaGTTGTGTCTCCAGGTGGAGAGAAGTTCACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLVQGTKYLGRD*LCLQVERSSPC Trigger: ACAAGGTGAACTTCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAGGTACTTGGTACCTTGAACGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | CTCGTTCAAGGTACCAAGTACCTGGGAAGAGATTGCTaGTGTCTCCAGGTGGAGAGAAGTTCACCTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LVQGTKYLGRDC*CLQVERSSPCG Trigger: ACCACAAGGTGAACTTCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAGGTACTTGGTACCTTGAACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | TCCACTCGTTCAAGGTACCAAGTACCTGGGAAGAGATaGCTTGTGTCTCCAGGTGGAGAGAAGTTCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: STRSRYQVPGKR*LVSPGGEKFTL Trigger: CAAGGTGAACTTCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAGGTACTTGGTACCTTGAACGAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | CATATACTGCACATCATCGAGGGTGAAAGGCTGGTTGTTTCCAGCTaGCTTCCACTGATTCTGGATCTTCTTGCGGTAGGCTGCATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HILHIIEGERLVVSS*LPLILDLLAVGCIA Trigger: TGCTATGCAGCCTACCGCAAGAAGATCCAGAATCAGTGGAAGCAAGCTGGAAACAACCAGCCTTTCACCCTCGATGATGTGCAGTATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 72 bp | GTTGGTGGTATCTATGCCCTCGATGTCAGTGTTGCCTaGATCCTGGAACAGTTCCATGAGCACTGTTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGGIYALDVSVA*ILEQFHEHCFD Trigger: GTCAAAACAGTGCTCATGGAACTGTTCCAGGATTCAGGCAACACTGACATCGAGGGCATAGATACCACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 72 bp | ATGCATCTCATCCACTCGTTCAAGGTACCAAGTACCTaGGAAGAGATTGCTTGTGTCTCCAGGTGGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MHLIHSFKVPST*EEIACVSRWRE Trigger: TTCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAGGTACTTGGTACCTTGAACGAGTGGATGAGATGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | TTGCCTGAATCCTGGAACAGTTCCATGAGCACTGTTTaGACAGCCTTGGACTTGTCAATGATGGTCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPESWNSSMSTV*TALDLSMMVSV Trigger: CACCGAGACCATCATTGACAAGTCCAAGGCTGTCAAAACAGTGCTCATGGAACTGTTCCAGGATTCAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | TTTAGACCCCTGAAGGCCTCTAGGCCCTTGTATAAGTTGTTCTGTTaGTCACTGCTGGATGACAGGAAGTCATTGAACATCAACCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FRPLKASRPLYKLFC*SLLDDRKSLNINRA Trigger: GGCTCGGTTGATGTTCAATGACTTCCTGTCATCCAGCAGTGACAAACAGAACAACTTATACAAGGGCCTAGAGGCCTTCAGGGGTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | TCTTCCAGCTTTAGACCCCTGAAGGCCTCTAGGCCCTTGTATAAGTaGTTCTGTTTGTCACTGCTGGATGACAGGAAGTCATTGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFRPLKASRPLYK*FCLSLLDDRKSLNI Trigger: GATGTTCAATGACTTCCTGTCATCCAGCAGTGACAAACAGAACAACTTATACAAGGGCCTAGAGGCCTTCAGGGGTCTAAAGCTGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 90 bp | TCTCATCCACTCGTTCAAGGTACCAAGTACCTGGGAAGAGATTGCTaGTGTCTCCAGGTGGAGAGAAGTTCACCTTGTGGTAAAATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHPLVQGTKYLGRDC*CLQVERSSPCGKIA Trigger: AGCAATTTTACCACAAGGTGAACTTCTCTCCACCTGGAGACACAAGCAATCTCTTCCCAGGTACTTGGTACCTTGAACGAGTGGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 72 bp | CCTTGTTGGTGTAGGTTTCTTCCAGCTTTAGACCCCTaGAGGCCTCTAGGCCCTTGTATAAGTTGTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PCWCRFLPALDP*RPLGPCISCSV Trigger: AACAGAACAACTTATACAAGGGCCTAGAGGCCTTCAGGGGTCTAAAGCTGGAAGAAACCTACACCAACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CCA 72 bp | GCCAGGGATTTCTGGACCATCTTGCAAAAGGGTGTGTaGAAGATCATATACTGCACATCATCGAGGGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ARDFWTILQKGV*KIIYCTSSRVK Trigger: TTTCACCCTCGATGATGTGCAGTATATGATCTTCCACACACCCTTTTGCAAGATGGTCCAGAAATCCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | ATTGTTGAACTTTTCCAGGTCAGTTTGGTCCACATATaGGGCTGGAAAATAGACCTCCAGGGCAAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: IVELFQVSLVHI*GWKIDLQGKDA Trigger: GGCATCCTTGCCCTGGAGGTCTATTTTCCAGCCCAATATGTGGACCAAACTGACCTGGAAAAGTTCAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | CCCAAGCCCACTGTATACTTCCCTGCTTCCACATTGTaGAACTTTTCCAGGTCAGTTTGGTCCACATATTGG | + |
|
Preference number: 6 (lower is better) Translates to: PKPTVYFPASTL*NFSRSVWSTYW Trigger: CCAATATGTGGACCAAACTGACCTGGAAAAGTTCAACAATGTGGAAGCAGGGAAGTATACAGTGGGCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | TTGTTCTGTTTGTCACTGCTGGATGACAGGAAGTCATaGAACATCAACCGAGCCAGGGATTTCTGGACCATC | + |
|
Preference number: 6 (lower is better) Translates to: LFCLSLLDDRKS*NINRARDFWTI Trigger: GATGGTCCAGAAATCCCTGGCTCGGTTGATGTTCAATGACTTCCTGTCATCCAGCAGTGACAAACAGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS TCA 72 bp | TGTGGTAAAATTGCTCTCTCTGGTTCATTATTTCTGTaGATTCCTCAGGGGACATGCGTCTCCGGGAGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: CGKIALSGSLFL*IPQGTCVSGSL Trigger: TAGACTCCCGGAGACGCATGTCCCCTGAGGAATTCACAGAAATAATGAACCAGAGAGAGCAATTTTACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
||
| CDS CAA 72 bp | CTGAAGGCCTCTAGGCCCTTGTATAAGTTGTTCTGTTaGTCACTGCTGGATGACAGGAAGTCATTGAACATC | + |
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Preference number: 6 (lower is better) Translates to: LKASRPLYKLFC*SLLDDRKSLNI Trigger: GATGTTCAATGACTTCCTGTCATCCAGCAGTGACAAACAGAACAACTTATACAAGGGCCTAGAGGCCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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| CDS CAA 90 bp | TTGTATAAGTTGTTCTGTTTGTCACTGCTGGATGACAGGAAGTCATaGAACATCAACCGAGCCAGGGATTTCTGGACCATCTTGCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LYKLFCLSLLDDRKS*NINRARDFWTILQK Trigger: CTTTTGCAAGATGGTCCAGAAATCCCTGGCTCGGTTGATGTTCAATGACTTCCTGTCATCCAGCAGTGACAAACAGAACAACTTATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090746.3 ENSMUST00000120541.8 |
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