Pregenerated sensors for HMGCR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021670Ensembl transcript IDs: ENSMUST00000022176.15, ENSMUST00000168855.2, ENSMUST00000169196.8, ENSMUST00000169202.2, ENSMUST00000169945.8, ENSMUST00000169966.2, ENSMUST00000170287.8, ENSMUST00000171537.2
Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | TGCATCCTGGCCACATGCGATGTAGATAGCAGTGACAATGTTTGCTaGGTGGGCGTTGTAGCCGCCTATGCTCCCAGCCATGGCCGAGCC | + |
Preference number: 1 (lower is better) Translates to: CILATCDVDSSDNVC*VGVVAAYAPSHGRA Trigger: GGCTCGGCCATGGCTGGGAGCATAGGCGGCTACAACGCCCACGCAGCAAACATTGTCACTGCTATCTACATCGCATGTGGCCAGGATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR GCA 90 bp | TGCTGCATCCTGGCCACATGCGATGTAGATAGCAGTGACAATGTTTaGTGCGTGGGCGTTGTAGCCGCCTATGCTCCCAGCCATGGCCGA | + |
Preference number: 1 (lower is better) Translates to: CCILATCDVDSSDNV*CVGVVAAYAPSHGR Trigger: TCGGCCATGGCTGGGAGCATAGGCGGCTACAACGCCCACGCAGCAAACATTGTCACTGCTATCTACATCGCATGTGGCCAGGATGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR GCA 90 bp | CTGCTGCCAAGGCTGCCATCAAGGACAGCTCACCAGCCATCACAGTaGCACATACAATTCGGGCAAGCTGCCGTGCGTTTTCTCCAGGAT | + |
Preference number: 1 (lower is better) Translates to: LLPRLPSRTAHQPSQ*HIQFGQAAVRFLQD Trigger: ATCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGTATGTGGCACTGTGATGGCTGGTGAGCTGTCCTTGATGGCAGCCTTGGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 90 bp | TGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTTTCTTaGTTGCAAACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTC | + |
Preference number: 1 (lower is better) Translates to: WLQQFGLWTSPRDVS*LQTDEEPSPWAWAV Trigger: GACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGTTTGCAATCAAGAAACATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
3UTR TCA 90 bp | CAGCTCCAGGGCCATTCATGTGGCTCCATCATTGGCTCTGTAAGCTaGCTTTCCCTTCATTGGGCTTGGAAAGCAAGCCAGGGTTTCCTG | + |
Preference number: 1 (lower is better) Translates to: QLQGHSCGSIIGSVS*LSLHWAWKASQGFL Trigger: CAGGAAACCCTGGCTTGCTTTCCAAGCCCAATGAAGGGAAAGTCAGCTTACAGAGCCAATGATGGAGCCACATGAATGGCCCTGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR TCA 90 bp | GATCTCTCCAGAACACAGCACGGAAAGAACCAGAGTTCCCACATCTaGGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCC | + |
Preference number: 1 (lower is better) Translates to: DLSRTQHGKNQSSHI*GVSVQRTSDVSESA Trigger: GGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAACTCTGGTTCTTTCCGTGCTGTGTTCTGGAGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
3UTR GCA 90 bp | CACAGCACGGAAAGAACCAGAGTTCCCACATCTGAGGAGTCTCTGTaGAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAAACCAAGCAG | + |
Preference number: 1 (lower is better) Translates to: HSTERTRVPTSEESL*KEPQTSLKAPETKQ Trigger: CTGCTTGGTTTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAACTCTGGTTCTTTCCGTGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
3UTR GCA 90 bp | ATACAATTCGGGCAAGCTGCCGTGCGTTTTCTCCAGGATTGTCTTTaGATGCTCCTTGAACACCTAGCATCTGCAGGCAGGCTTGCTGAG | + |
Preference number: 1 (lower is better) Translates to: IQFGQAAVRFLQDCL*MLLEHLASAGRLAE Trigger: CTCAGCAAGCCTGCCTGCAGATGCTAGGTGTTCAAGGAGCATGCAAAGACAATCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 90 bp | TTCCCACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTaGAAGCGCCAGAAACCAAGCAGGGGTGTCACTGATCATGTCCAT | + |
Preference number: 1 (lower is better) Translates to: FPHLRSLCAKNLRRL*KRQKPSRGVTDHVH Trigger: ATGGACATGATCAGTGACACCCCTGCTTGGTTTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
3UTR GCA 90 bp | GTTGTGAACCATGTGACTTCTGACAAGATGTCCTGCTGCCAAGGCTaGCATCAAGGACAGCTCACCAGCCATCACAGTGCCACATACAAT | + |
Preference number: 1 (lower is better) Translates to: VVNHVTSDKMSCCQG*HQGQLTSHHSATYN Trigger: ATTGTATGTGGCACTGTGATGGCTGGTGAGCTGTCCTTGATGGCAGCCTTGGCAGCAGGACATCTTGTCAGAAGTCACATGGTTCACAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR GCA 90 bp | ATCTTCCACAATAATACTGACACAATCACTAAGAGGCTCCCATGCTaGCGCGGCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACAC | + |
Preference number: 1 (lower is better) Translates to: IFHNNTDTITKRLPC*RGTLGMSFRVHLLH Trigger: GTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAGCATGGGAGCCTCTTAGTGATTGTGTCAGTATTATTGTGGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR GCA 90 bp | GCAATCTTCCACAATAATACTGACACAATCACTAAGAGGCTCCCATaGTGCCGCGGCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTA | + |
Preference number: 1 (lower is better) Translates to: AIFHNNTDTITKRLP*CRGTLGMSFRVHLL Trigger: TAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAGCATGGGAGCCTCTTAGTGATTGTGTCAGTATTATTGTGGAAGATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR CCA 90 bp | CAAGCCAGGGTTTCCTGGACCAGTGCTAACGAGCACTGTCTTCTCTaGCCCAAGCTAGAGTATTTTATCAGTGTAAAAGTTGAGTTCTTT | + |
Preference number: 1 (lower is better) Translates to: QARVSWTSANEHCLL*PKLEYFISVKVEFF Trigger: AAAGAACTCAACTTTTACACTGATAAAATACTCTAGCTTGGGCCAGAGAAGACAGTGCTCGTTAGCACTGGTCCAGGAAACCCTGGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR CCA 90 bp | ATGCCCGCGCTTCAGTTCAGTGTCAGGATCCTCAAGCTGCCTTCTTaGTGCACGTTCCTTGAAGATCTTGTAAATTTATCTTTGATCTGT | + |
Preference number: 1 (lower is better) Translates to: MPALQFSVRILKLPS*CTFLEDLVNLSLIC Trigger: ACAGATCAAAGATAAATTTACAAGATCTTCAAGGAACGTGCACCAAGAAGGCAGCTTGAGGATCCTGACACTGAACTGAAGCGCGGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 90 bp | GACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTCCTTaGGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGATCCTCAA | + |
Preference number: 1 (lower is better) Translates to: DSALRFLIHRLHVSP*EPNARASVQCQDPQ Trigger: TTGAGGATCCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR-3UTR GCA 90 bp | ACAAGATGTCCTGCTGCCAAGGCTGCCATCAAGGACAGCTCACCAGCCATCACAACAATTCGGGCAAGCTaGCGTGCGTTTTCTCCAGGA | + |
Preference number: 2 (lower is better) Translates to: TRCPAAKAAIKDSSPAITTIRAS*RAFSPG Trigger: TCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGT...TGTGATGGCTGGTGAGCTGTCCTTGATGGCAGCCTTGGCAGCAGGACATCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR CAA 90 bp | TGGCTCCATCATTGGCTCTGTAAGCTGACTTTCCCTTCATTGGGCTaGGAAAGCAAGCCAGGGTTTCCTGGACCAGTGCTAACGAGCACT | + |
Preference number: 2 (lower is better) Translates to: WLHHWLCKLTFPSLG*ESKPGFPGPVLTST Trigger: AGTGCTCGTTAGCACTGGTCCAGGAAACCCTGGCTTGCTTTCCAAGCCCAATGAAGGGAAAGTCAGCTTACAGAGCCAATGATGGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR-3UTR GCA 90 bp | CACAGTGCCACATACAATTCGGGCAAGCTGCCGTGCGTTTTCTCCAGGATTGTCTGCATCCTGGCCACATaGGATGTAGATAGCAGTGAC | + |
Preference number: 2 (lower is better) Translates to: HSATYNSGKLPCVFSRIVCILAT*DVDSSD Trigger: GTCACTGCTATCTACATCGCATGTGGCCAGGATGCA...GACAATCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGTATGTGGCACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR-3UTR CCA 90 bp | ACAAGATGTCCTGCTGCCAAGGCTGCCATCAAGGACAGCTCACCAGCCATCACACTTCGATCCAATTTATaGCAGCAGGCTTCTTGTCGG | + |
Preference number: 2 (lower is better) Translates to: TRCPAAKAAIKDSSPAITLRSNL*QQASCR Trigger: CCGACAAGAAGCCTGCTGCCATAAATTGGATCGAAG...TGTGATGGCTGGTGAGCTGTCCTTGATGGCAGCCTTGGCAGCAGGACATCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR-3UTR GCA 90 bp | AGAGGTGAGCCCCACACTGATCACCAGTTTCCAGCTTGTGGTAGCTTTCAGAAAAGCTCACATCTGTGGTaGTCAGAGCACCGGTACCAT | + |
Preference number: 2 (lower is better) Translates to: RGEPHTDHQFPACGSFQKSSHLW*SEHRYH Trigger: ATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCT...TTTCTGAAAGCTACCACAAGCTGGAAACTGGTGATCAGTGTGGGGCTCACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR-3UTR CCA 90 bp | CTCCAGGATTGTCTTTGCATGCTCCTTGAACACCTAGCATCTGCAGGCAGGCTTTCTCACCACCTTGGCTaGAATGACGGCTTCACAAAC | + |
Preference number: 2 (lower is better) Translates to: LQDCLCMLLEHLASAGRLSHHLG*NDGFTN Trigger: GTTTGTGAAGCCGTCATTCCAGCCAAGGTGGTGAGA...AAGCCTGCCTGCAGATGCTAGGTGTTCAAGGAGCATGCAAAGACAATCCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR CAA 90 bp | TCAACCATAGCTTCCGTAGTTGTCTTTAACACCTCTCTCACCACCTaGGCTGGAATGACGGCTTCACAAACCACAGTCTTTCCTCGTCCT | + |
Preference number: 2 (lower is better) Translates to: STIASVVVFNTSLTT*AGMTASQTTVFPRP Trigger: AGGACGAGGAAAGACTGTGGTTTGTGAAGCCGTCATTCCAGCCAAGGTGGTGAGAGAGGTGTTAAAGACAACTACGGAAGCTATGGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR-3UTR GCA 90 bp | AGAGGTGAGCCCCACACTGATCACCAGTTTCCAGCTTGTGGTAGCTTTCAGAAATCTGAGGAGTCTCTGTaGAAAGAACCTCAGACGTCT | + |
Preference number: 2 (lower is better) Translates to: RGEPHTDHQFPACGSFQKSEESL*KEPQTS Trigger: AGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGA...TTTCTGAAAGCTACCACAAGCTGGAAACTGGTGATCAGTGTGGGGCTCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR-3UTR GCA 90 bp | AGAGTTCCCACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAACACCAGCCATCACAGTaGCACATACAATTCGGGCAA | + |
Preference number: 2 (lower is better) Translates to: RVPTSEESLCKEPQTSLKHQPSQ*HIQFGQ Trigger: TTGCCCGAATTGTATGTGGCACTGTGATGGCTGGTG...TTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR CAA 90 bp | ATACTGACACAATCACTAAGAGGCTCCCATGCTGCCGCGGCACTCTaGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCAGCTTC | + |
Preference number: 2 (lower is better) Translates to: ILTQSLRGSHAAAAL*ECLSESIFYTNVSF Trigger: GAAGCTGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAGCATGGGAGCCTCTTAGTGATTGTGTCAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR-3UTR TCA 90 bp | AGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCAAAGTAATTCTTCCATaGAGAAGTAGGCCCCCAATC | + |
Preference number: 2 (lower is better) Translates to: SFQKRTVAHICGAQSTGTKVILP*RSRPPI Trigger: GATTGGGGGCCTACTTCTTCATGGAAGAATTACTTT...GGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR-3UTR TCA 90 bp | CTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTCCTAGATGTGTAAGTTaGAGTAAACCCTCTTTCCCA | + |
Preference number: 2 (lower is better) Translates to: LNDNLAPAVWPMDISSGCPRCVS*SKPSFP Trigger: TGGGAAAGAGGGTTTACTTCAACTTACACATCTAGG...ACATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
3UTR-3UTR GCA 90 bp | AGAGTTCCCACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAATCTGAGGAGTCTCTGTaGAAAGAACCTCAGACGTCT | + |
Preference number: 2 (lower is better) Translates to: RVPTSEESLCKEPQTSLKSEESL*KEPQTS Trigger: AGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGA...TTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
3UTR-3UTR TCA 90 bp | ACGGTTCCTATCTCTATCGATGGCATGGTGCAGCTGATATATAAGTCTTCATTTCCACCTTGGCTGGAATaGCGGCTTCACAAACCACAG | + |
Preference number: 2 (lower is better) Translates to: TVPISIDGMVQLIYKSSFPPWLE*RLHKPQ Trigger: CTGTGGTTTGTGAAGCCGTCATTCCAGCCAAGGTGG...AAATGAAGACTTATATATCAGCTGCACCATGCCATCGATAGAGATAGGAACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR-3UTR GCA 90 bp | AAACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGACTCACAGAGATAAATaGAGTGACTGTTTTCTTCGT | + |
Preference number: 2 (lower is better) Translates to: KRTVAHICGAQSTGTIHVTHRDK*SDCFLR Trigger: ACGAAGAAAACAGTCACTGCATTTATCTCTGTGAGT...CACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR-3UTR CCA 90 bp | GTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTCCCAGTCCCTGGGCCTaGGCAGTCAAAGAATGTGAG | + |
Preference number: 2 (lower is better) Translates to: VERTAKIQNRVLCYTGHIPSPWA*AVKECE Trigger: CTCACATTCTTTGACTGCCCAGGCCCAGGGACTGGG...AATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
3UTR-3UTR CCA 90 bp | AAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTAGTAGAAGAACCCAGTCCCTaGGCCTGGGCAGTCAAAGAA | + |
Preference number: 2 (lower is better) Translates to: KEQLKYRIECCAIRDTLVEEPSP*AWAVKE Trigger: TTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTC...TACTAATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
3UTR-3UTR TCA 90 bp | AGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTCCTCGGGATGTTTCTTaGTTGCAAACTGATGAAGAA | + |
Preference number: 2 (lower is better) Translates to: SMMVKLGCQLDTCRKRESPRDVS*LQTDEE Trigger: TTCTTCATCAGTTTGCAATCAAGAAACATCCCGAGG...AGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
3UTR CCA 72 bp | CCCTTCATTGGGCTTGGAAAGCAAGCCAGGGTTTCCTaGACCAGTGCTAACGAGCACTGTCTTCTCTGGCCC | + |
Preference number: 3 (lower is better) Translates to: PFIGLGKQARVS*TSANEHCLLWP Trigger: GGGCCAGAGAAGACAGTGCTCGTTAGCACTGGTCCAGGAAACCCTGGCTTGCTTTCCAAGCCCAATGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR GCA 72 bp | GCCACATGCGATGTAGATAGCAGTGACAATGTTTGCTaGGTGGGCGTTGTAGCCGCCTATGCTCCCAGCCAT | + |
Preference number: 3 (lower is better) Translates to: ATCDVDSSDNVC*VGVVAAYAPSH Trigger: ATGGCTGGGAGCATAGGCGGCTACAACGCCCACGCAGCAAACATTGTCACTGCTATCTACATCGCATGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR GCA 72 bp | AGGCTGCCATCAAGGACAGCTCACCAGCCATCACAGTaGCACATACAATTCGGGCAAGCTGCCGTGCGTTTT | + |
Preference number: 3 (lower is better) Translates to: RLPSRTAHQPSQ*HIQFGQAAVRF Trigger: AAAACGCACGGCAGCTTGCCCGAATTGTATGTGGCACTGTGATGGCTGGTGAGCTGTCCTTGATGGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR GCA 72 bp | CATGTGACTTCTGACAAGATGTCCTGCTGCCAAGGCTaGCATCAAGGACAGCTCACCAGCCATCACAGTGCC | + |
Preference number: 3 (lower is better) Translates to: HVTSDKMSCCQG*HQGQLTSHHSA Trigger: GGCACTGTGATGGCTGGTGAGCTGTCCTTGATGGCAGCCTTGGCAGCAGGACATCTTGTCAGAAGTCACATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR CCA 72 bp | CTAGCATCTGCAGGCAGGCTTGCTGAGGTAGAAGGTTaGTCCCACCACCCACGGTTCCTATCTCTATCGATG | + |
Preference number: 3 (lower is better) Translates to: LASAGRLAEVEG*SHHPRFLSLSM Trigger: CATCGATAGAGATAGGAACCGTGGGTGGTGGGACCAACCTTCTACCTCAGCAAGCCTGCCTGCAGATGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 72 bp | ACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTaGGATCTCTCCAGAACACAGCACGGAAAGAACCAG | + |
Preference number: 3 (lower is better) Translates to: TSVVLRAPVPST*DLSRTQHGKNQ Trigger: CTGGTTCTTTCCGTGCTGTGTTCTGGAGAGATCTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
3UTR TCA 72 bp | CTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTaGAAGCGCCAGAAACCAAGCAGGGGTGTCACTGAT | + |
Preference number: 3 (lower is better) Translates to: LRSLCAKNLRRL*KRQKPSRGVTD Trigger: ATCAGTGACACCCCTGCTTGGTTTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
3UTR GCA 72 bp | TTGGCCTATGGACATCTCCTCGGGATGTTTCTTGATTaGAAACTGATGAAGAACCCAGTCCCTGGGCCTGGG | + |
Preference number: 3 (lower is better) Translates to: LAYGHLLGMFLD*KLMKNPVPGPG Trigger: CCCAGGCCCAGGGACTGGGTTCTTCATCAGTTTGCAATCAAGAAACATCCCGAGGAGATGTCCATAGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
3UTR GCA 72 bp | CCAGCCATCACAGTGCCACATACAATTCGGGCAAGCTaGCGTGCGTTTTCTCCAGGATTGTCTTTGCATGCT | + |
Preference number: 3 (lower is better) Translates to: PAITVPHTIRAS*RAFSPGLSLHA Trigger: AGCATGCAAAGACAATCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGTATGTGGCACTGTGATGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR GCA 72 bp | GTTGTGAACCATGTGACTTCTGACAAGATGTCCTGCTaGCAAGGCTGCCATCAAGGACAGCTCACCAGCCAT | + |
Preference number: 3 (lower is better) Translates to: VVNHVTSDKMSC*QGCHQGQLTSH Trigger: ATGGCTGGTGAGCTGTCCTTGATGGCAGCCTTGGCAGCAGGACATCTTGTCAGAAGTCACATGGTTCACAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR-3UTR CAA 90 bp | ACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAAACCTCTCTCACCACCTaGGCTGGAATGACGGCTTCA | + |
Preference number: 3 (lower is better) Translates to: TSEESLCKEPQTSLKAPETSLTT*AGMTAS Trigger: TGAAGCCGTCATTCCAGCCAAGGTGGTGAGAGAGGT...TTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 72 bp | CAGTTTGGCCTATGGACATCTCCTCGGGATGTTTCTTaGTTGCAAACTGATGAAGAACCCAGTCCCTGGGCC | + |
Preference number: 3 (lower is better) Translates to: QFGLWTSPRDVS*LQTDEEPSPWA Trigger: GGCCCAGGGACTGGGTTCTTCATCAGTTTGCAATCAAGAAACATCCCGAGGAGATGTCCATAGGCCAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
3UTR GCA 72 bp | CATCACAGTGCCACATACAATTCGGGCAAGCTGCCGTaGGTTTTCTCCAGGATTGTCTTTGCATGCTCCTTG | + |
Preference number: 3 (lower is better) Translates to: HHSATYNSGKLP*VFSRIVFACSL Trigger: CAAGGAGCATGCAAAGACAATCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGTATGTGGCACTGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR-3UTR CAA 90 bp | TTGGTCCCACCACCCACGGTTCCTATCTCTATCGATGGCATGGTGCAGCTGATAGAGCCCACAAGATTCTaGTTAATGTTTACGTCAACC | + |
Preference number: 3 (lower is better) Translates to: LVPPPTVPISIDGMVQLIEPTRF*LMFTST Trigger: GGTTGACGTAAACATTAACAAGAATCTTGTGGGCTC...TATCAGCTGCACCATGCCATCGATAGAGATAGGAACCGTGGGTGGTGGGACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 72 bp | TTGTCTTTAACACCTCTCTCACCACCTTGGCTGGAATaGCGGCTTCACAAACCACAGTCTTTCCTCGTCCTT | + |
Preference number: 3 (lower is better) Translates to: LSLTPLSPPWLE*RLHKPQSFLVL Trigger: AAGGACGAGGAAAGACTGTGGTTTGTGAAGCCGTCATTCCAGCCAAGGTGGTGAGAGAGGTGTTAAAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR GCA 72 bp | CACAATAATACTGACACAATCACTAAGAGGCTCCCATaGTGCCGCGGCACTCTTGGAATGTCTTTCAGAGTC | + |
Preference number: 3 (lower is better) Translates to: HNNTDTITKRLP*CRGTLGMSFRV Trigger: GACTCTGAAAGACATTCCAAGAGTGCCGCGGCAGCATGGGAGCCTCTTAGTGATTGTGTCAGTATTATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR CCA 72 bp | AAACCACAGTCTTTCCTCGTCCTTCGATCCAATTTATaGCAGCAGGCTTCTTGTCGGTGCAATAGTTCCCAC | + |
Preference number: 3 (lower is better) Translates to: KPQSFLVLRSNL*QQASCRCNSSH Trigger: GTGGGAACTATTGCACCGACAAGAAGCCTGCTGCCATAAATTGGATCGAAGGACGAGGAAAGACTGTGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 72 bp | AAGAGCTTTTATGGGCCCATTAAAGGAGCCCATAAATaGTTCAGTCACCAAACTCCTGGCCACAGGAACAAG | + |
Preference number: 3 (lower is better) Translates to: KSFYGPIKGAHK*FSHQTPGHRNK Trigger: CTTGTTCCTGTGGCCAGGAGTTTGGTGACTGAATCATTTATGGGCTCCTTTAATGGGCCCATAAAAGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR TCA 72 bp | AATTTATCTTTGATCTGTTGTGAACCATGTGACTTCTaGCAAGATGTCCTGCTGCCAAGGCTGCCATCAAGG | + |
Preference number: 3 (lower is better) Translates to: NLSLICCEPCDF*QDVLLPRLPSR Trigger: CCTTGATGGCAGCCTTGGCAGCAGGACATCTTGTCAGAAGTCACATGGTTCACAACAGATCAAAGATAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
3UTR TCA 72 bp | TTGAGATTTTTAATTCACAGATTGCATGTTAGTCCTTaGGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAG | + |
Preference number: 3 (lower is better) Translates to: LRFLIHRLHVSP*EPNARASVQCQ Trigger: CTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATCTGTGAATTAAAAATCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 ENSMUST00000169945.8 |
||
3UTR GCA 72 bp | GTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTaGTATACGGGACACATTAGTATGATGGTTAAACTT | + |
Preference number: 3 (lower is better) Translates to: VERTAKIQNRVL*YTGHISMMVKL Trigger: AAGTTTAACCATCATACTAATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGTGAGCTGAACATGTCGAGTCATCCCATCTaGAAGGACCCGGCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: DEEPSPWAWAVKECELNMSSHPI*KDPAAG Trigger: GCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGA...CATGTTCAGCTCACATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | ACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGAGATCTTGCAGGCAGGCTTGCTaGGGTAGAAGGTTGGTCCCA | + |
Preference number: 4 (lower is better) Translates to: TVAHICGAQSTGTIHVRSCRQAC*GRRLVP Trigger: TGGGACCAACCTTCTACCTCAGCAAGCCTGCCTGCA...AGATCTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | ACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGAGCCCCACATTCTGTGCTaGATCCTGGCCACATGCGAT | + |
Preference number: 4 (lower is better) Translates to: TNCSSHLWCSEHRYHPREPHILC*ILATCD Trigger: ATCGCATGTGGCCAGGATGCAGCACAGAATGTGGGG...CTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | ACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAACAGCTGGCGGACGCCTaGCATGGTGCCAACTCCAAT | + |
Preference number: 4 (lower is better) Translates to: TSEESLCKEPQTSLKAPEQLADA*HGANSN Trigger: ATTGGAGTTGGCACCATGTCAGGCGTCCGCCAGCTG...TTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | ACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGTGAGCTGAACTGGCGTCCCCCGTCCTaGACTGGAAACGGATATAGA | + |
Preference number: 4 (lower is better) Translates to: TDEEPSPWAWAVKECELNWRPPS*TGNGYR Trigger: TCTATATCCGTTTCCAGTCCAGGACGGGGGACGCCA...GTTCAGCTCACATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTAGCCGAAGCAGCACATaGTCTCCAGCTGGCGGACGC | + |
Preference number: 4 (lower is better) Translates to: QFPACGSFQKRTVAHICGSRSST*SPAGGR Trigger: GCGTCCGCCAGCTGGAGATCATGTGCTGCTTCGGCT...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | GATTGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGCCACCTTGGCTGGAATaGCGGCTTCACAAACCACAG | + |
Preference number: 4 (lower is better) Translates to: DCMLVLENPMPALQFSVRPPWLE*RLHKPQ Trigger: CTGTGGTTTGTGAAGCCGTCATTCCAGCCAAGGTGG...CCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR TCA 90 bp | GCCTGGGCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGTGCAGGCAGGCTTGCTaGGGTAGAAGGTTGGTCCCA | + |
Preference number: 4 (lower is better) Translates to: AWAVKECELNMRLEPANMCRQAC*GRRLVP Trigger: TGGGACCAACCTTCTACCTCAGCAAGCCTGCCTGCA...CATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGCCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | CTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTGGCGGACGCCTGACATaGTGCCAACTCCAATCACAA | + |
Preference number: 4 (lower is better) Translates to: LNDNLAPAVWPMDISSGCGGRLT*CQLQSQ Trigger: TTGTGATTGGAGTTGGCACCATGTCAGGCGTCCGCC...ACATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | CTTGATTGCAAACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGCTGAGGTAGAAGGTTaGTCCCACCACCCACGGTTC | + |
Preference number: 4 (lower is better) Translates to: LDCKLMKNPVPGPGQSKNAEVEG*SHHPRF Trigger: GAACCGTGGGTGGTGGGACCAACCTTCTACCTCAGC...ATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGTTTGCAATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | AGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCCTCTGGCAAAATGGCTaGGCTGCCAAATTGGACGAC | + |
Preference number: 4 (lower is better) Translates to: SFQKRTVAHICGAQSTGTLWQNG*AAKLDD Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCAGAG...GGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | CTTGATTGCAAACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATCCACCTTGGCTGGAATaGCGGCTTCACAAACCACAG | + |
Preference number: 4 (lower is better) Translates to: LDCKLMKNPVPGPGQSKNPPWLE*RLHKPQ Trigger: CTGTGGTTTGTGAAGCCGTCATTCCAGCCAAGGTGG...ATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGTTTGCAATCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GATTGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGGCCACGAAGAGGCCATaGATCCGGAAAAGTCTTGAC | + |
Preference number: 4 (lower is better) Translates to: DCMLVLENPMPALQFSVRATKRP*IRKSLD Trigger: GTCAAGACTTTTCCGGATGCATGGCCTCTTCGTGGC...CCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
CDS-3UTR GCA 90 bp | CTGGCCACATGCGATGTAGATAGCAGTGACAATGTTTGCTGCGTGGGCGTTGTAGCCACGAAGAGGCCATaGATCCGGAAAAGTCTTGAC | + |
Preference number: 4 (lower is better) Translates to: LATCDVDSSDNVCCVGVVATKRP*IRKSLD Trigger: GTCAAGACTTTTCCGGATGCATGGCCTCTTCGTGGC...TACAACGCCCACGCAGCAAACATTGTCACTGCTATCTACATCGCATGTGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
CDS-3UTR GCA 90 bp | GATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGTGAGCTGAACATGGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCA | + |
Preference number: 4 (lower is better) Translates to: DEEPSPWAWAVKECELNMAKWLS*QIGRPS Trigger: TGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...CATGTTCAGCTCACATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTTCGAGTCATCCCATCTaGAAGGACCCGGCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: QFPACGSFQKRTVAHICGSSHPI*KDPAAG Trigger: GCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGA...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | GAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGCAGTGCTCCTCCATGAGTGACAATGTTTGCTaGGTGGGCGTTGTAGCCGCC | + |
Preference number: 4 (lower is better) Translates to: ECELNMRLEPANMQCSSMSDNVC*VGVVAA Trigger: GGCGGCTACAACGCCCACGCAGCAAACATTGTCACT...CATGGAGGAGCACTGCATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | ACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGAGCCACTCCAACAGGGATaGGCATATATCCGATCACAT | + |
Preference number: 4 (lower is better) Translates to: TNCSSHLWCSEHRYHPREPLQQG*AYIRSH Trigger: ATGTGATCGGATATATGCCCATCCCTGTTGGAGTGG...CTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTCAAGGACCCGGCTGCTaGCACCTCCACCAAGGCTTA | + |
Preference number: 4 (lower is better) Translates to: QFPACGSFQKRTVAHICGQGPGC*HLHQGL Trigger: TAAGCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTG...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | AAACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGTGCAATAGTTCCCACTaGCTGCCAGAATCTGCATGT | + |
Preference number: 4 (lower is better) Translates to: KRTVAHICGAQSTGTIHVCNSSH*LPESAC Trigger: ACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCA...CACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | GGTCCCACCACCCACGGTTCCTATCTCTATCGATGGCATGGTGCAGCTGATATATTTCTCCGTACCCGGTaGACATGTTCATGGACATCA | + |
Preference number: 4 (lower is better) Translates to: GPTTHGSYLYRWHGAADIFLRTR*TCSWTS Trigger: TGATGTCCATGAACATGTTCACCGGGTACGGAGAAA...TATATCAGCTGCACCATGCCATCGATAGAGATAGGAACCGTGGGTGGTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
CDS-3UTR GCA 90 bp | TGGGCCTGGGCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATTGTGGGGCCCAGGATTaGCATTCCACGAGCTATATT | + |
Preference number: 4 (lower is better) Translates to: WAWAVKECELNMRLEPANCGAQD*HSTSYI Trigger: AATATAGCTCGTGGAATGGCAATCCTGGGCCCCACA...ATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGCCCAGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGCAGTGCGGACGCCTGACATGGTaGCAACTCCAATCACAAGGC | + |
Preference number: 4 (lower is better) Translates to: AVKECELNMRLEPANMQCGRLTW*QLQSQG Trigger: GCCTTGTGATTGGAGTTGGCACCATGTCAGGCGTCC...GCACTGCATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGCAGTGCCCCCACATTCTGTGCTaGATCCTGGCCACATGCGAT | + |
Preference number: 4 (lower is better) Translates to: AVKECELNMRLEPANMQCPHILC*ILATCD Trigger: ATCGCATGTGGCCAGGATGCAGCACAGAATGTGGGG...GCACTGCATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GATTGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGCACCAGCCATCACAGTaGCACATACAATTCGGGCAA | + |
Preference number: 4 (lower is better) Translates to: DCMLVLENPMPALQFSVRHQPSQ*HIQFGQ Trigger: TTGCCCGAATTGTATGTGGCACTGTGATGGCTGGTG...CCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR CCA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTTGGAAGACGCACCACTaGGCCTCGAGTCATCCCATC | + |
Preference number: 4 (lower is better) Translates to: QFPACGSFQKRTVAHICGWKTHH*ASSHPI Trigger: GATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCA...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTAGAGTCACAAGCACGTaGAAGACGCACCACTGGGCC | + |
Preference number: 4 (lower is better) Translates to: QFPACGSFQKRTVAHICGRVTST*KTHHWA Trigger: GGCCCAGTGGTGCGTCTTCCACGTGCTTGTGACTCT...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTGACGAGCAAATCTGCTaGTGCTATCAAAGGCCTCCT | + |
Preference number: 4 (lower is better) Translates to: LNDNLAPAVWPMDISSGCDEQIC*CYQRPP Trigger: AGGAGGCCTTTGATAGCACCAGCAGATTTGCTCGTC...ACATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | ACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGAGATCTTCTTGTTGTTGCCGGTaGACATGTTCATGGACATCA | + |
Preference number: 4 (lower is better) Translates to: TVAHICGAQSTGTIHVRSSCCCR*TCSWTS Trigger: TGATGTCCATGAACATGTTCACCGGCAACAACAAGA...AGATCTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | AGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCCCGGGAAGAATGTCATaGACACAAAGTAGTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: SFQKRTVAHICGAQSTGTPGRMS*TQSSWP Trigger: TGGCCAACTACTTTGTGTTCATGACATTCTTCCCGG...GGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | ACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGAGGCTCAATGTCCATGCTaGTCATCTTGGAGAGATAAA | + |
Preference number: 4 (lower is better) Translates to: TNCSSHLWCSEHRYHPREAQCPC*SSWRDK Trigger: TTTATCTCTCCAAGATGATCAGCATGGACATTGAGC...CTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | CTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTTCAGGAAAGAACTCCTaGAGCTTCAGCAGTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: LNDNLAPAVWPMDISSGCSGKNS*SFSSAF Trigger: GAAAGCACTGCTGAAGCTTCAGGAGTTCTTTCCTGA...ACATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | GATTGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGTGCAATAGTTCCCACTaGCTGCCAGAATCTGCATGT | + |
Preference number: 4 (lower is better) Translates to: DCMLVLENPMPALQFSVRCNSSH*LPESAC Trigger: ACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCA...CCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR TCA 90 bp | AGAGGTGAGCCCCACACTGATCACCAGTTTCCAGCTTGTGGTAGCTTTCAGAAAGAACCATGTGACTTCTaGCAAGATGTCCTGCTGCCA | + |
Preference number: 4 (lower is better) Translates to: RGEPHTDHQFPACGSFQKEPCDF*QDVLLP Trigger: TGGCAGCAGGACATCTTGTCAGAAGTCACATGGTTC...TTTCTGAAAGCTACCACAAGCTGGAAACTGGTGATCAGTGTGGGGCTCACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | ACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGTGAGCTGAACCTCAGGGTAATCACTTaGTCAATGTCCATGCTGATC | + |
Preference number: 4 (lower is better) Translates to: TDEEPSPWAWAVKECELNLRVIT*SMSMLI Trigger: GATCAGCATGGACATTGAGCAAGTGATTACCCTGAG...GTTCAGCTCACATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | ATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTCAACTGCAAGGACCCGGCTaGTGGCACCTCCACCAAGGC | + |
Preference number: 4 (lower is better) Translates to: MMVKLGCQLDTCRKRESQLQGPG*WHLHQG Trigger: GCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAG...TTGAGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GCCTGGGCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGCCAGGTCTTTACTTCTaGAGAGTCACAAGCACGTGG | + |
Preference number: 4 (lower is better) Translates to: AWAVKECELNMRLEPANMPGLYF*RVTSTW Trigger: CCACGTGCTTGTGACTCTGCAGAAGTAAAGACCTGG...CATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGCCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | TGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGATCGGCCTCCTTTATCACTaGAAACCCTTCAGGTGTTTC | + |
Preference number: 4 (lower is better) Translates to: CMLVLENPMPALQFSVRIGLLYH*KPFRCF Trigger: GAAACACCTGAAGGGTTTGCAGTGATAAAGGAGGCC...GATCCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | GAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAAACCAAGCAGCTGAAGCTTCAGCAGTaGTTTCTCCGTACCCTTAGA | + |
Preference number: 4 (lower is better) Translates to: ESLCKEPQTSLKAPETKQLKLQQ*FLRTLR Trigger: TCTAAGGGTACGGAGAAAGCACTGCTGAAGCTTCAG...CTGCTTGGTTTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTAGTGACAATGTTTGCTaGGTGGGCGTTGTAGCCGCC | + |
Preference number: 4 (lower is better) Translates to: QFPACGSFQKRTVAHICGSDNVC*VGVVAA Trigger: GGCGGCTACAACGCCCACGCAGCAAACATTGTCACT...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | GCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGCAGTGCAGCAGTGACAATGTTTaGTGCGTGGGCGTTGTAGCC | + |
Preference number: 4 (lower is better) Translates to: AVKECELNMRLEPANMQCSSDNV*CVGVVA Trigger: GGCTACAACGCCCACGCAGCAAACATTGTCACTGCT...GCACTGCATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | ACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAATGCATCCTGGCCACATaGGATGTAGATAGCAGTGAC | + |
Preference number: 4 (lower is better) Translates to: TSEESLCKEPQTSLKAPECILAT*DVDSSD Trigger: GTCACTGCTATCTACATCGCATGTGGCCAGGATGCA...TTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | ACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGAGATCTCTCCAGGATTGTCTTTaGATGCTCCTTGAACACCTA | + |
Preference number: 4 (lower is better) Translates to: TVAHICGAQSTGTIHVRSLQDCL*MLLEHL Trigger: TAGGTGTTCAAGGAGCATGCAAAGACAATCCTGGAG...AGATCTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTTCGGGCAAGCTGCCGTaGGTTTTCTCCAGGATTGTC | + |
Preference number: 4 (lower is better) Translates to: QFPACGSFQKRTVAHICGSGKLP*VFSRIV Trigger: GACAATCCTGGAGAAAACGCACGGCAGCTTGCCCGA...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | CTGCCGCGGCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCAACAATTCGGGCAAGCTaGCGTGCGTTTTCTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LPRHSWNVFQSPSSTQMSTIRAS*RAFSPG Trigger: TCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGT...TGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | GAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAAACCAAGCAGAGCTTGAGAAAATTGTaGAGAGGCCAGCAATACCCA | + |
Preference number: 4 (lower is better) Translates to: ESLCKEPQTSLKAPETKQSLRKL*RGQQYP Trigger: TGGGTATTGCTGGCCTCTTCACAATTTTCTCAAGCT...CTGCTTGGTTTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | AATAGAGTGCTGTGCTATACGGGACACATTAGTATGATGGTTAAACTTGGTTGTAGCCGAAGCAGCACATaGTCTCCAGCTGGCGGACGC | + |
Preference number: 4 (lower is better) Translates to: NRVLCYTGHISMMVKLGCSRSST*SPAGGR Trigger: GCGTCCGCCAGCTGGAGATCATGTGCTGCTTCGGCT...ACAACCAAGTTTAACCATCATACTAATGTGTCCCGTATAGCACAGCACTCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | GTCCTTCGATCCAATTTATGGCAGCAGGCTTCTTGTCGGTGCAATAGTTCCCACTCAGGAAAGAACTCCTaGAGCTTCAGCAGTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: VLRSNLWQQASCRCNSSHSGKNS*SFSSAF Trigger: GAAAGCACTGCTGAAGCTTCAGGAGTTCTTTCCTGA...GTGGGAACTATTGCACCGACAAGAAGCCTGCTGCCATAAATTGGATCGAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
CDS-3UTR GCA 90 bp | AGAGTTCCCACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAATGTGGGGCCCAGGATTaGCATTCCACGAGCTATATT | + |
Preference number: 4 (lower is better) Translates to: RVPTSEESLCKEPQTSLKCGAQD*HSTSYI Trigger: AATATAGCTCGTGGAATGGCAATCCTGGGCCCCACA...TTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | AATAGAGTGCTGTGCTATACGGGACACATTAGTATGATGGTTAAACTTGGTTGTCAGGCACAGAGGCCCTaGCACTCCAACAGGGATGGG | + |
Preference number: 4 (lower is better) Translates to: NRVLCYTGHISMMVKLGCQAQRP*HSNRDG Trigger: CCCATCCCTGTTGGAGTGGCAGGGCCTCTGTGCCTG...ACAACCAAGTTTAACCATCATACTAATGTGTCCCGTATAGCACAGCACTCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | ATCTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTAGACGAGCAAATCTaGTGGTGCTATCAAAGGCCT | + |
Preference number: 4 (lower is better) Translates to: ISMITWLQQFGLWTSPRDVDEQI*WCYQRP Trigger: AGGCCTTTGATAGCACCAGCAGATTTGCTCGTCTAC...ATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | AGGCTAGACTGGCTGAAAGCAAGGGTAGAAAGAACAGCTAAAATACAGAATAGACAAGGACCCGGCTGCTaGCACCTCCACCAAGGCTTA | + |
Preference number: 4 (lower is better) Translates to: RLDWLKARVERTAKIQNRQGPGC*HLHQGL Trigger: TAAGCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTG...TCTATTCTGTATTTTAGCTGTTCTTTCTACCCTTGCTTTCAGCCAGTCTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | CTGCCGCGGCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCATCTCACCACCTTGGCTaGAATGACGGCTTCACAAAC | + |
Preference number: 4 (lower is better) Translates to: LPRHSWNVFQSPSSTQMSSHHLG*NDGFTN Trigger: GTTTGTGAAGCCGTCATTCCAGCCAAGGTGGTGAGA...TGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR CAA 72 bp | CAATCACTAAGAGGCTCCCATGCTGCCGCGGCACTCTaGGAATGTCTTTCAGAGTCCATCTTCTACACAAAT | + |
Preference number: 4 (lower is better) Translates to: QSLRGSHAAAAL*ECLSESIFYTN Trigger: ATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAGCATGGGAGCCTCTTAGTGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR CAA 72 bp | GCTTCCGTAGTTGTCTTTAACACCTCTCTCACCACCTaGGCTGGAATGACGGCTTCACAAACCACAGTCTTT | + |
Preference number: 4 (lower is better) Translates to: ASVVVFNTSLTT*AGMTASQTTVF Trigger: AAAGACTGTGGTTTGTGAAGCCGTCATTCCAGCCAAGGTGGTGAGAGAGGTGTTAAAGACAACTACGGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168855.2 |
||
CDS-3UTR TCA 90 bp | TGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGATCTCTTTGTCGAGGAAATaGATGACGACTGTACTGAAG | + |
Preference number: 4 (lower is better) Translates to: CMLVLENPMPALQFSVRISLSRK*MTTVLK Trigger: CTTCAGTACAGTCGTCATTCATTTCCTCGACAAAGA...GATCCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | GTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTCAGCTGGCGGACGCCTaGCATGGTGCCAACTCCAAT | + |
Preference number: 4 (lower is better) Translates to: VERTAKIQNRVLCYTGHIQLADA*HGANSN Trigger: ATTGGAGTTGGCACCATGTCAGGCGTCCGCCAGCTG...AATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | GATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGTGAGCTGAACATGATGGCATGGTGCAGCTaGTATATAAGTCTTCATTTG | + |
Preference number: 4 (lower is better) Translates to: DEEPSPWAWAVKECELNMMAWCS*YISLHL Trigger: CAAATGAAGACTTATATATCAGCTGCACCATGCCAT...CATGTTCAGCTCACATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | ACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAACTTTGCACCTTTCTCTaGATTCTCCAGTATCTGCAG | + |
Preference number: 4 (lower is better) Translates to: TSEESLCKEPQTSLKAPELCTFL*ILQYLQ Trigger: CTGCAGATACTGGAGAATGCAGAGAAAGGTGCAAAG...TTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTCTGCAAGGACCCGGCTaGTGGCACCTCCACCAAGGC | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSLQGPG*WHLHQG Trigger: GCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAG...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | GCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCAGCTTCCCAGACAAGATGTCCTGCTaGCAAGGCTGCCATCAAGGA | + |
Preference number: 4 (lower is better) Translates to: ALLECLSESIFYTNVSFPDKMSC*QGCHQG Trigger: TCCTTGATGGCAGCCTTGGCAGCAGGACATCTTGTC...TGGGAAGCTGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTTTGGTTCAATTCTCTTaGACACATCTTCGTCCAGAC | + |
Preference number: 4 (lower is better) Translates to: LNDNLAPAVWPMDISSGCLVQFS*THLRPD Trigger: GTCTGGACGAAGATGTGTCCAAGAGAATTGAACCAA...ACATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | GATTGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGCCAGAGAGAAACACTTaGTTCAATTCTCTTGGACAC | + |
Preference number: 4 (lower is better) Translates to: DCMLVLENPMPALQFSVRPERNT*FNSLGH Trigger: GTGTCCAAGAGAATTGAACCAAGTGTTTCTCTCTGG...CCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CTGCCGCGGCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCATCAACTTTTCTCTCTTaGTTCGCTCCTGGATCCTCC | + |
Preference number: 4 (lower is better) Translates to: LPRHSWNVFQSPSSTQMSSTFLS*FAPGSS Trigger: GGAGGATCCAGGAGCGAACCAAGAGAGAAAAGTTGA...TGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | AAACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGTTCCAATTTGTAAGCTaGGATATGCTTGGCATTGAC | + |
Preference number: 4 (lower is better) Translates to: KRTVAHICGAQSTGTIHVFQFVS*DMLGID Trigger: GTCAATGCCAAGCATATCCCAGCTTACAAATTGGAA...CACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | ACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGTGAGCTGAACTTCCAATTTGTAAGCTaGGATATGCTTGGCATTGAC | + |
Preference number: 4 (lower is better) Translates to: TDEEPSPWAWAVKECELNFQFVS*DMLGID Trigger: GTCAATGCCAAGCATATCCCAGCTTACAAATTGGAA...GTTCAGCTCACATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | ACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTATGGAAGACGCACCACTaGGCCTCGAGTCATCCCATC | + |
Preference number: 4 (lower is better) Translates to: TLVPALTSLSNECLPRCVWKTHH*ASSHPI Trigger: GATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCA...TACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | CTGCCGCGGCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCACTTCGATCCAATTTATaGCAGCAGGCTTCTTGTCGG | + |
Preference number: 4 (lower is better) Translates to: LPRHSWNVFQSPSSTQMSLRSNL*QQASCR Trigger: CCGACAAGAAGCCTGCTGCCATAAATTGGATCGAAG...TGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | TCCTCCATGGCCTCCACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTTCGATCCAATTTATaGCAGCAGGCTTCTTGTCGG | + |
Preference number: 4 (lower is better) Translates to: SSMASTLVPALTSLSNECLRSNL*QQASCR Trigger: CCGACAAGAAGCCTGCTGCCATAAATTGGATCGAAG...ACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGTGGAGGCCATGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | TCCTCCATGGCCTCCACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTAGCTTGAGAAAATTGTaGAGAGGCCAGCAATACCCA | + |
Preference number: 4 (lower is better) Translates to: SSMASTLVPALTSLSNECSLRKL*RGQQYP Trigger: TGGGTATTGCTGGCCTCTTCACAATTTTCTCAAGCT...ACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGTGGAGGCCATGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | CTTGATTGCAAACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATGCTCAATGTCCATGCTaGTCATCTTGGAGAGATAAA | + |
Preference number: 4 (lower is better) Translates to: LDCKLMKNPVPGPGQSKNAQCPC*SSWRDK Trigger: TTTATCTCTCCAAGATGATCAGCATGGACATTGAGC...ATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGTTTGCAATCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTCAGGCACAGAGGCCCTaGCACTCCAACAGGGATGGG | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSQAQRP*HSNRDG Trigger: CCCATCCCTGTTGGAGTGGCAGGGCCTCTGTGCCTG...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | AGGCTAGACTGGCTGAAAGCAAGGGTAGAAAGAACAGCTAAAATACAGAATAGACTCTGGCAAAATGGCTaGGCTGCCAAATTGGACGAC | + |
Preference number: 4 (lower is better) Translates to: RLDWLKARVERTAKIQNRLWQNG*AAKLDD Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCAGAG...TCTATTCTGTATTTTAGCTGTTCTTTCTACCCTTGCTTTCAGCCAGTCTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | GATTGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGTTGGTGCACGTTCCTTaGAGATCTTGTAAATTTATC | + |
Preference number: 4 (lower is better) Translates to: DCMLVLENPMPALQFSVRLVHVP*RSCKFI Trigger: GATAAATTTACAAGATCTTCAAGGAACGTGCACCAA...CCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | ACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTAGCCACGAAGAGGCCATaGATCCGGAAAAGTCTTGAC | + |
Preference number: 4 (lower is better) Translates to: TLVPALTSLSNECLPRCVATKRP*IRKSLD Trigger: GTCAAGACTTTTCCGGATGCATGGCCTCTTCGTGGC...TACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | CTGCCGCGGCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCACAACTGGATGATCTCTaGATCACTAAGGAACTTTGC | + |
Preference number: 4 (lower is better) Translates to: LPRHSWNVFQSPSSTQMSQLDDL*ITKELC Trigger: GCAAAGTTCCTTAGTGATGCAGAGATCATCCAGTTG...TGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGCCGCGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | AGGGTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACTGCATCCTGGCCACATaGGATGTAGATAGCAGTGAC | + |
Preference number: 4 (lower is better) Translates to: RVERTAKIQNRVLCYTGHCILAT*DVDSSD Trigger: GTCACTGCTATCTACATCGCATGTGGCCAGGATGCA...GTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | AGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTGCTGAGCTGCCAAATTaGACGACCCTCACGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: SMMVKLGCQLDTCRKRESAELPN*TTLTAF Trigger: GAAAGCCGTGAGGGTCGTCCAATTTGGCAGCTCAGC...AGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | AAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTAGTAAGAGTCACAAGCACGTaGAAGACGCACCACTGGGCC | + |
Preference number: 4 (lower is better) Translates to: KEQLKYRIECCAIRDTLVRVTST*KTHHWA Trigger: GGCCCAGTGGTGCGTCTTCCACGTGCTTGTGACTCT...TACTAATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | AGGGTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACTCTCACCACCTTGGCTaGAATGACGGCTTCACAAAC | + |
Preference number: 4 (lower is better) Translates to: RVERTAKIQNRVLCYTGHSHHLG*NDGFTN Trigger: GTTTGTGAAGCCGTCATTCCAGCCAAGGTGGTGAGA...GTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | TCCTCCATGGCCTCCACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTTCCTATCTCTATCGATaGCATGGTGCAGCTGATATA | + |
Preference number: 4 (lower is better) Translates to: SSMASTLVPALTSLSNECSYLYR*HGAADI Trigger: TATATCAGCTGCACCATGCCATCGATAGAGATAGGA...ACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGTGGAGGCCATGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | CATACAACAGCAAAGGCAATCTTCCACAATAATACTGACACAATCACTAAGAGGTCCGCTGTGCTGTTCTaGGGAGAAGGATCAGCTATC | + |
Preference number: 4 (lower is better) Translates to: HTTAKAIFHNNTDTITKRSAVLF*GEGSAI Trigger: GATAGCTGATCCTTCTCCTCAGAACAGCACAGCGGA...CCTCTTAGTGATTGTGTCAGTATTATTGTGGAAGATTGCCTTTGCTGTTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | TCCTCCATGGCCTCCACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTGCATTCTCCAGTATCTaGAGACATTCTTCATTAGGT | + |
Preference number: 4 (lower is better) Translates to: SSMASTLVPALTSLSNECAFSSI*RHSSLG Trigger: ACCTAATGAAGAATGTCTGCAGATACTGGAGAATGC...ACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGTGGAGGCCATGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | TTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTCAATGATAACCTGGCTATAGTTCCCACTGACTaGCAGAATCTGCATGTCAGG | + |
Preference number: 4 (lower is better) Translates to: LVVNLTLVGRGNLNDNLAIVPTD*QNLHVR Trigger: CCTGACATGCAGATTCTGGCAGTCAGTGGGAACTAT...AGCCAGGTTATCATTGAGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GACATTGGTTACAGTCACCAGCATAAAACACTCAATACTTTTTACTGCCACTTCAGCAGTGACAATGTTTaGTGCGTGGGCGTTGTAGCC | + |
Preference number: 4 (lower is better) Translates to: DIGYSHQHKTLNTFYCHFSSDNV*CVGVVA Trigger: GGCTACAACGCCCACGCAGCAAACATTGTCACTGCT...GAAGTGGCAGTAAAAAGTATTGAGTGTTTTATGCTGGTGACTGTAACCAATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCTGAGGTAGAAGGTTaGTCCCACCACCCACGGTTC | + |
Preference number: 4 (lower is better) Translates to: HVHSSSTRQCIEIFNSQIAEVEG*SHHPRF Trigger: GAACCGTGGGTGGTGGGACCAACCTTCTACCTCAGC...AATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | CTGTGCTATACGGGACACATTAGTATGATGGTTAAACTTGGTTGTCAACTTGACCCGGGAAGAATGTCATaGACACAAAGTAGTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: LCYTGHISMMVKLGCQLDPGRMS*TQSSWP Trigger: TGGCCAACTACTTTGTGTTCATGACATTCTTCCCGG...GTCAAGTTGACAACCAAGTTTAACCATCATACTAATGTGTCCCGTATAGCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | AAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTAGTATCCGCTGTGCTGTTCTaGGGAGAAGGATCAGCTATC | + |
Preference number: 4 (lower is better) Translates to: KEQLKYRIECCAIRDTLVSAVLF*GEGSAI Trigger: GATAGCTGATCCTTCTCCTCAGAACAGCACAGCGGA...TACTAATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | CATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTCCACCTTGGCTGGAATaGCGGCTTCACAAACCACAG | + |
Preference number: 4 (lower is better) Translates to: HSSSTRQCIEIFNSQIACPPWLE*RLHKPQ Trigger: CTGTGGTTTGTGAAGCCGTCATTCCAGCCAAGGTGG...ACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTGGACGCCTGACATGGTaGCAACTCCAATCACAAGGC | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSGRLTW*QLQSQG Trigger: GCCTTGTGATTGGAGTTGGCACCATGTCAGGCGTCC...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTAGTGACAATGTTTGCTaGGTGGGCGTTGTAGCCGCC | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSSDNVC*VGVVAA Trigger: GGCGGCTACAACGCCCACGCAGCAAACATTGTCACT...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | ATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGTCGGGCAAGCTGCCGTaGGTTTTCTCCAGGATTGTC | + |
Preference number: 4 (lower is better) Translates to: MSIHLPLDSALRFLIHRLSGKLP*VFSRIV Trigger: GACAATCCTGGAGAAAACGCACGGCAGCTTGCCCGA...CAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR CCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTGGCGGACGCCTGACATaGTGCCAACTCCAATCACAA | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSGGRLT*CQLQSQ Trigger: TTGTGATTGGAGTTGGCACCATGTCAGGCGTCCGCC...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | ACAAAACATGAATTTAGCAAGATGACATTGGTTACAGTCACCAGCATAAAACACGCTGAGCTGCCAAATTaGACGACCCTCACGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: TKHEFSKMTLVTVTSIKHAELPN*TTLTAF Trigger: GAAAGCCGTGAGGGTCGTCCAATTTGGCAGCTCAGC...GTGTTTTATGCTGGTGACTGTAACCAATGTCATCTTGCTAAATTCATGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTTGGCGTCCCCCGTCCTaGACTGGAAACGGATATAGA | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSWRPPS*TGNGYR Trigger: TCTATATCCGTTTCCAGTCCAGGACGGGGGACGCCA...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | AGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTTGCAATAGTTCCCACTaGCTGCCAGAATCTGCATGT | + |
Preference number: 4 (lower is better) Translates to: SMMVKLGCQLDTCRKRESCNSSH*LPESAC Trigger: ACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCA...AGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | TTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTCAATGATAACCTGGCTCAACTGGATGATCTCTaGATCACTAAGGAACTTTGC | + |
Preference number: 4 (lower is better) Translates to: LVVNLTLVGRGNLNDNLAQLDDL*ITKELC Trigger: GCAAAGTTCCTTAGTGATGCAGAGATCATCCAGTTG...AGCCAGGTTATCATTGAGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GATCATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGCCAGGTCTTTACTTCTaGAGAGTCACAAGCACGTGG | + |
Preference number: 4 (lower is better) Translates to: DHVHSSSTRQCIEIFNSQPGLYF*RVTSTW Trigger: CCACGTGCTTGTGACTCTGCAGAAGTAAAGACCTGG...CTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | TTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTAAGTGGCCTCCTTTATCACTaGAAACCCTTCAGGTGTTTC | + |
Preference number: 4 (lower is better) Translates to: LVPALTSLSNECLPRCVSGLLYH*KPFRCF Trigger: GAAACACCTGAAGGGTTTGCAGTGATAAAGGAGGCC...ACTTACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | TTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTAAGTCTGAAGCTTCAGCAGTaGTTTCTCCGTACCCTTAGA | + |
Preference number: 4 (lower is better) Translates to: LVPALTSLSNECLPRCVSLKLQQ*FLRTLR Trigger: TCTAAGGGTACGGAGAAAGCACTGCTGAAGCTTCAG...ACTTACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | AGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTCTGACTGCCAGAATCTaGATGTCAGGAAAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: SMMVKLGCQLDTCRKRESLTARI*MSGKNS Trigger: GGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAG...AGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | TCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATAGCAGTGACAATGTTTaGTGCGTGGGCGTTGTAGCC | + |
Preference number: 4 (lower is better) Translates to: SIHLPLDSALRFLIHRLHSSDNV*CVGVVA Trigger: GGCTACAACGCCCACGCAGCAAACATTGTCACTGCT...ATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | CATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTACAATTCGGGCAAGCTaGCGTGCGTTTTCTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: HVHSSSTRQCIEIFNSQITIRAS*RAFSPG Trigger: TCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGT...AATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTGACAAGATGTCCTGCTaGCAAGGCTGCCATCAAGGA | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSDKMSC*QGCHQG Trigger: TCCTTGATGGCAGCCTTGGCAGCAGGACATCTTGTC...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR CCA 90 bp | CACATTAGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGTCAACTTTTCTCTCTTaGTTCGCTCCTGGATCCTCC | + |
Preference number: 4 (lower is better) Translates to: HISMMVKLGCQLDTCRKRSTFLS*FAPGSS Trigger: GGAGGATCCAGGAGCGAACCAAGAGAGAAAAGTTGA...CCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACTAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | TTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTAAGTCCACTCCAACAGGGATaGGCATATATCCGATCACAT | + |
Preference number: 4 (lower is better) Translates to: LVPALTSLSNECLPRCVSPLQQG*AYIRSH Trigger: ATGTGATCGGATATATGCCCATCCCTGTTGGAGTGG...ACTTACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | TTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTAAGTTCTTGTTGTTGCCGGTaGACATGTTCATGGACATCA | + |
Preference number: 4 (lower is better) Translates to: LVPALTSLSNECLPRCVSSCCCR*TCSWTS Trigger: TGATGTCCATGAACATGTTCACCGGCAACAACAAGA...ACTTACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | CATACAACAGCAAAGGCAATCTTCCACAATAATACTGACACAATCACTAAGAGGCTACAACAGTTGTCTTaGGCTTTCTTTGAGGTCACG | + |
Preference number: 4 (lower is better) Translates to: HTTAKAIFHNNTDTITKRLQQLS*AFFEVT Trigger: CGTGACCTCAAAGAAAGCTCAAGACAACTGTTGTAG...CCTCTTAGTGATTGTGTCAGTATTATTGTGGAAGATTGCCTTTGCTGTTGTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | CACATTAGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGCTACAACAGTTGTCTTaGGCTTTCTTTGAGGTCACG | + |
Preference number: 4 (lower is better) Translates to: HISMMVKLGCQLDTCRKRLQQLS*AFFEVT Trigger: CGTGACCTCAAAGAAAGCTCAAGACAACTGTTGTAG...CCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACTAATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR TCA 90 bp | GATCATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGTCAGGAAAGAACTCCTaGAGCTTCAGCAGTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: DHVHSSSTRQCIEIFNSQSGKNS*SFSSAF Trigger: GAAAGCACTGCTGAAGCTTCAGGAGTTCTTTCCTGA...CTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 |
||
CDS-3UTR TCA 90 bp | CATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTGAACCATGTGACTTCTaGCAAGATGTCCTGCTGCCA | + |
Preference number: 4 (lower is better) Translates to: HSSSTRQCIEIFNSQIACEPCDF*QDVLLP Trigger: TGGCAGCAGGACATCTTGTCAGAAGTCACATGGTTC...ACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCA | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSAKWLS*QIGRPS Trigger: TGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | GTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTCTTTGCACCTTTCTCTaGATTCTCCAGTATCTGCAG | + |
Preference number: 4 (lower is better) Translates to: VERTAKIQNRVLCYTGHILCTFL*ILQYLQ Trigger: CTGCAGATACTGGAGAATGCAGAGAAAGGTGCAAAG...AATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | CATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTCACCAGCCATCACAGTaGCACATACAATTCGGGCAA | + |
Preference number: 4 (lower is better) Translates to: HVHSSSTRQCIEIFNSQIHQPSQ*HIQFGQ Trigger: TTGCCCGAATTGTATGTGGCACTGTGATGGCTGGTG...AATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR CCA 90 bp | GCACTCTTGGAATGTCTTTCAGAGTCCATCTTCTACACAAATGTCAGCTTCCCATTGGGTTACGGGGTTTaGTTTATTTTCTTCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: ALLECLSESIFYTNVSFPLGYGV*FIFFFF Trigger: GAAGAAGAAGAAAATAAACCAAACCCCGTAACCCAA...TGGGAAGCTGACATTTGTGTAGAAGATGGACTCTGAAAGACATTCCAAGAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | ACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTACCAGAGAGAAACACTTaGTTCAATTCTCTTGGACAC | + |
Preference number: 4 (lower is better) Translates to: TLVPALTSLSNECLPRCVPERNT*FNSLGH Trigger: GTGTCCAAGAGAATTGAACCAAGTGTTTCTCTCTGG...TACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | ATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGGACGAGCAAATCTGCTaGTGCTATCAAAGGCCTCCT | + |
Preference number: 4 (lower is better) Translates to: MSIHLPLDSALRFLIHRLDEQIC*CYQRPP Trigger: AGGAGGCCTTTGATAGCACCAGCAGATTTGCTCGTC...CAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | TCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATTCTCACCACCTTGGCTaGAATGACGGCTTCACAAAC | + |
Preference number: 4 (lower is better) Translates to: SIHLPLDSALRFLIHRLHSHHLG*NDGFTN Trigger: GTTTGTGAAGCCGTCATTCCAGCCAAGGTGGTGAGA...ATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR TCA 90 bp | AGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTCCTGTGAATTTGAACTaGGGGCAAACTTTGCTAATG | + |
Preference number: 4 (lower is better) Translates to: SMMVKLGCQLDTCRKRESPVNLN*GQTLLM Trigger: CATTAGCAAAGTTTGCCCTCAGTTCAAATTCACAGG...AGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | CATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGTAGACGAGCAAATCTaGTGGTGCTATCAAAGGCCT | + |
Preference number: 4 (lower is better) Translates to: HVHSSSTRQCIEIFNSQIVDEQI*WCYQRP Trigger: AGGCCTTTGATAGCACCAGCAGATTTGCTCGTCTAC...AATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | CATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTCTGACTGCCAGAATCTaGATGTCAGGAAAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: HVHSSSTRQCIEIFNSQILTARI*MSGKNS Trigger: GGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAG...AATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | TCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATCTGACTGCCAGAATCTaGATGTCAGGAAAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: SIHLPLDSALRFLIHRLHLTARI*MSGKNS Trigger: GGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAG...ATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTATAGTTCCCACTGACTaGCAGAATCTGCATGTCAGG | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSIVPTD*QNLHVR Trigger: CCTGACATGCAGATTCTGGCAGTCAGTGGGAACTAT...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | CATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTATAGTTCCCACTGACTaGCAGAATCTGCATGTCAGG | + |
Preference number: 4 (lower is better) Translates to: HVHSSSTRQCIEIFNSQIIVPTD*QNLHVR Trigger: CCTGACATGCAGATTCTGGCAGTCAGTGGGAACTAT...AATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR CCA 90 bp | CATACAACAGCAAAGGCAATCTTCCACAATAATACTGACACAATCACTAAGAGGAAAACTCTGGCAAAATaGCTGAGCTGCCAAATTGGA | + |
Preference number: 4 (lower is better) Translates to: HTTAKAIFHNNTDTITKRKTLAK*LSCQIG Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCAGAGTTTT...CCTCTTAGTGATTGTGTCAGTATTATTGTGGAAGATTGCCTTTGCTGTTGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTCTTCGATCCAATTTATaGCAGCAGGCTTCTTGTCGG | + |
Preference number: 4 (lower is better) Translates to: HLPLDSALRFLIHRLHVSLRSNL*QQASCR Trigger: CCGACAAGAAGCCTGCTGCCATAAATTGGATCGAAG...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR GCA 90 bp | ACAAAACATGAATTTAGCAAGATGACATTGGTTACAGTCACCAGCATAAAACACCTCAGGGTAATCACTTaGTCAATGTCCATGCTGATC | + |
Preference number: 4 (lower is better) Translates to: TKHEFSKMTLVTVTSIKHLRVIT*SMSMLI Trigger: GATCAGCATGGACATTGAGCAAGTGATTACCCTGAG...GTGTTTTATGCTGGTGACTGTAACCAATGTCATCTTGCTAAATTCATGTTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR GCA 90 bp | CATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTCTCCAGGATTGTCTTTaGATGCTCCTTGAACACCTA | + |
Preference number: 4 (lower is better) Translates to: HSSSTRQCIEIFNSQIACLQDCL*MLLEHL Trigger: TAGGTGTTCAAGGAGCATGCAAAGACAATCCTGGAG...ACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR TCA 90 bp | ACAAAACATGAATTTAGCAAGATGACATTGGTTACAGTCACCAGCATAAAACACCCTGTGAATTTGAACTaGGGGCAAACTTTGCTAATG | + |
Preference number: 4 (lower is better) Translates to: TKHEFSKMTLVTVTSIKHPVNLN*GQTLLM Trigger: CATTAGCAAAGTTTGCCCTCAGTTCAAATTCACAGG...GTGTTTTATGCTGGTGACTGTAACCAATGTCATCTTGCTAAATTCATGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | GACATTGGTTACAGTCACCAGCATAAAACACTCAATACTTTTTACTGCCACTTCCAAAGAAAATATACTTaGCAGCCAAAAGGAAGGCTA | + |
Preference number: 4 (lower is better) Translates to: DIGYSHQHKTLNTFYCHFQRKYT*QPKGRL Trigger: TAGCCTTCCTTTTGGCTGTCAAGTATATTTTCTTTG...GAAGTGGCAGTAAAAAGTATTGAGTGTTTTATGCTGGTGACTGTAACCAATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | GTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTCAAAGAAAATATACTTaGCAGCCAAAAGGAAGGCTA | + |
Preference number: 4 (lower is better) Translates to: VERTAKIQNRVLCYTGHIQRKYT*QPKGRL Trigger: TAGCCTTCCTTTTGGCTGTCAAGTATATTTTCTTTG...AATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR GCA 90 bp | GATCATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGGCATTCTCCAGTATCTaGAGACATTCTTCATTAGGT | + |
Preference number: 4 (lower is better) Translates to: DHVHSSSTRQCIEIFNSQAFSSI*RHSSLG Trigger: ACCTAATGAAGAATGTCTGCAGATACTGGAGAATGC...CTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATGATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | AATAGAGTGCTGTGCTATACGGGACACATTAGTATGATGGTTAAACTTGGTTGTTTGGGTTACGGGGTTTaGTTTATTTTCTTCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: NRVLCYTGHISMMVKLGCLGYGV*FIFFFF Trigger: GAAGAAGAAGAAAATAAACCAAACCCCGTAACCCAA...ACAACCAAGTTTAACCATCATACTAATGTGTCCCGTATAGCACAGCACTCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CCA 90 bp | CATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTTGGTTCAATTCTCTTaGACACATCTTCGTCCAGAC | + |
Preference number: 4 (lower is better) Translates to: HSSSTRQCIEIFNSQIACLVQFS*THLRPD Trigger: GTCTGGACGAAGATGTGTCCAAGAGAATTGAACCAA...ACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CCA 90 bp | TCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATTCCTATCTCTATCGATaGCATGGTGCAGCTGATATA | + |
Preference number: 4 (lower is better) Translates to: SIHLPLDSALRFLIHRLHSYLYR*HGAADI Trigger: TATATCAGCTGCACCATGCCATCGATAGAGATAGGA...ATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
3UTR CAA 72 bp | CTGATCATGTCCATTCATCTTCCACTAGACAGTGCATaGAGATTTTTAATTCACAGATTGCATGTTAGTCCT | + |
Preference number: 4 (lower is better) Translates to: LIMSIHLPLDSA*RFLIHRLHVSP Trigger: AGGACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATGATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 ENSMUST00000169945.8 |
||
CDS-3UTR TCA 90 bp | CATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTATGGCATGGTGCAGCTaGTATATAAGTCTTCATTTG | + |
Preference number: 4 (lower is better) Translates to: HVHSSSTRQCIEIFNSQIMAWCS*YISLHL Trigger: CAAATGAAGACTTATATATCAGCTGCACCATGCCAT...AATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR TCA 90 bp | GATCATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGTTGGTGCACGTTCCTTaGAGATCTTGTAAATTTATC | + |
Preference number: 4 (lower is better) Translates to: DHVHSSSTRQCIEIFNSQLVHVP*RSCKFI Trigger: GATAAATTTACAAGATCTTCAAGGAACGTGCACCAA...CTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACATGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS GCA 90 bp | TCTGCAGCCTCTGTTAGTGCTGGCCACAAGACAGCCTTCCGTCGTTaGCATCGGCACCTGGTACTCCTTCCCATCCAGGCACAGAGGCCC | + |
Preference number: 5 (lower is better) Translates to: SAASVSAGHKTAFRR*HRHLVLLPIQAQRP Trigger: GGGCCTCTGTGCCTGGATGGGAAGGAGTACCAGGTGCCGATGGCAACGACGGAAGGCTGTCTTGTGGCCAGCACTAACAGAGGCTGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 90 bp | ACAAGCACGTGGAAGACGCACCACTGGGCCTCGAGTCATCCCATCTaGAAGGACCCGGCTGCTGGCACCTCCACCAAGGCTTATGGCTCT | + |
Preference number: 5 (lower is better) Translates to: TSTWKTHHWASSHPI*KDPAAGTSTKAYGS Trigger: AGAGCCATAAGCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCACGTGCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS CCA 90 bp | TTAGTGCTGGCCACAAGACAGCCTTCCGTCGTTGCCATCGGCACCTaGTACTCCTTCCCATCCAGGCACAGAGGCCCTGCCACTCCAACA | + |
Preference number: 5 (lower is better) Translates to: LVLATRQPSVVAIGT*YSFPSRHRGPATPT Trigger: TGTTGGAGTGGCAGGGCCTCTGTGCCTGGATGGGAAGGAGTACCAGGTGCCGATGGCAACGACGGAAGGCTGTCTTGTGGCCAGCACTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS CCA 90 bp | GGTCTTTACTTCTGCAGAGTCACAAGCACGTGGAAGACGCACCACTaGGCCTCGAGTCATCCCATCTGCAAGGACCCGGCTGCTGGCACC | + |
Preference number: 5 (lower is better) Translates to: GLYFCRVTSTWKTHH*ASSHPICKDPAAGT Trigger: GGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTAAAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS GCA 90 bp | ACAAGCACGTGGAAGACGCACCACTGGGCCTCGAGTCATCCCATCTaGAAGGACCCGGCTGCTGGCACCTCCACCAAGCAAGGAATAATT | + |
Preference number: 5 (lower is better) Translates to: TSTWKTHHWASSHPI*KDPAAGTSTKQGII Trigger: AATTATTCCTTGCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCACGTGCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169202.2 |
||
CDS GCA 90 bp | TGCCCATGGCGTCCCCCGTCCTGGACTGGAAACGGATATAGAGGTTaGGTCCTGCCATCGTCACGTGGAGTTTCTGTAGACGAGCAAATC | + |
Preference number: 5 (lower is better) Translates to: CPWRPPSWTGNGYRG*VLPSSRGVSVDEQI Trigger: GATTTGCTCGTCTACAGAAACTCCACGTGACGATGGCAGGACGCAACCTCTATATCCGTTTCCAGTCCAGGACGGGGGACGCCATGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS TCA 90 bp | ACAGGCCGGGAAGAATGTCATGAACACAAAGTAGTTGGCCAACACTaGCATGCAGCCGAAGCAGCACATGATCTCCAGCTGGCGGACGCC | + |
Preference number: 5 (lower is better) Translates to: TGREECHEHKVVGQH*HAAEAAHDLQLADA Trigger: GGCGTCCGCCAGCTGGAGATCATGTGCTGCTTCGGCTGCATGTCAGTGTTGGCCAACTACTTTGTGTTCATGACATTCTTCCCGGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS CCA 90 bp | ACTCCTTCCCATCCAGGCACAGAGGCCCTGCCACTCCAACAGGGATaGGCATATATCCGATCACATTCTCACAGCAAGCTCCCATCACCA | + |
Preference number: 5 (lower is better) Translates to: TPSHPGTEALPLQQG*AYIRSHSHSKLPSP Trigger: TGGTGATGGGAGCTTGCTGTGAGAATGTGATCGGATATATGCCCATCCCTGTTGGAGTGGCAGGGCCTCTGTGCCTGGATGGGAAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS TCA 90 bp | ACACAAAGTAGTTGGCCAACACTGACATGCAGCCGAAGCAGCACATaGTCTCCAGCTGGCGGACGCCTGACATGGTGCCAACTCCAATCA | + |
Preference number: 5 (lower is better) Translates to: TQSSWPTLTCSRSST*SPAGGRLTWCQLQS Trigger: TGATTGGAGTTGGCACCATGTCAGGCGTCCGCCAGCTGGAGATCATGTGCTGCTTCGGCTGCATGTCAGTGTTGGCCAACTACTTTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169196.8 ENSMUST00000170287.8 |
||
CDS GCA 90 bp | GACGCACCACTGGGCCTCGAGTCATCCCATCTGCAAGGACCCGGCTaGTGGCACCTCCACCAAGCAAGGAATAATTATAATCTCTGTAAG | + |
Preference number: 5 (lower is better) Translates to: DAPLGLESSHLQGPG*WHLHQARNNYNLCK Trigger: CTTACAGAGATTATAATTATTCCTTGCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAGTGGTGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169202.2 |
||
CDS TCA 90 bp | GAGAAAGCTCTAGGACCAGCGACACACAGGCCGGGAAGAATGTCATaGACACAAAGTAGTTGGCCAACACTGACATGCAGCCGAAGCAGC | + |
Preference number: 5 (lower is better) Translates to: EKALGPATHRPGRMS*TQSSWPTLTCSRSS Trigger: GCTGCTTCGGCTGCATGTCAGTGTTGGCCAACTACTTTGTGTTCATGACATTCTTCCCGGCCTGTGTGTCGCTGGTCCTAGAGCTTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 90 bp | GTTCCCACAATAACTTCCCAGGGGTGGGAGGCCACGAAGAGGCCATaGATCCGGAAAAGTCTTGACAACATTGTAGCCTCACAGTCCTTG | + |
Preference number: 5 (lower is better) Translates to: VPTITSQGWEATKRP*IRKSLDNIVASQSL Trigger: CAAGGACTGTGAGGCTACAATGTTGTCAAGACTTTTCCGGATGCATGGCCTCTTCGTGGCCTCCCACCCCTGGGAAGTTATTGTGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171537.2 |
||
CDS-3UTR CAA 90 bp | TGCATGTTAGTCCTTGAGAACCCAATGCCCGCGCTTCAGTTCAGTGTCAGGATCACCTCTCTCACCACCTaGGCTGGAATGACGGCTTCA | + |
Preference number: 5 (lower is better) Translates to: CMLVLENPMPALQFSVRITSLTT*AGMTAS Trigger: TGAAGCCGTCATTCCAGCCAAGGTGGTGAGAGAGGT...GATCCTGACACTGAACTGAAGCGCGGGCATTGGGTTCTCAAGGACTAACATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS GCA 90 bp | TATCACTGCAAACCCTTCAGGTGTTTCAAGCCAGGTCTTTACTTCTaGAGAGTCACAAGCACGTGGAAGACGCACCACTGGGCCTCGAGT | + |
Preference number: 5 (lower is better) Translates to: YHCKPFRCFKPGLYF*RVTSTWKTHHWASS Trigger: ACTCGAGGCCCAGTGGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTAAAGACCTGGCTTGAAACACCTGAAGGGTTTGCAGTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | GAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAGCGCCAGAAACCAAGCAGATACCCAGAATGTACTaGGACCCAAGCTGCCGTAGG | + |
Preference number: 5 (lower is better) Translates to: ESLCKEPQTSLKAPETKQIPRMY*DPSCRR Trigger: CCTACGGCAGCTTGGGTCCAAGTACATTCTGGGTAT...CTGCTTGGTTTCTGGCGCTTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS TCA 90 bp | TGGTGCCAACTCCAATCACAAGGCATTCCACAAGAGCGTCAAGAGTaGATGTGGGGCCCAGGATTGCCATTCCACGAGCTATATTTTCCC | + |
Preference number: 5 (lower is better) Translates to: WCQLQSQGIPQERQE*MWGPGLPFHELYFP Trigger: GGGAAAATATAGCTCGTGGAATGGCAATCCTGGGCCCCACATTCACTCTTGACGCTCTTGTGGAATGCCTTGTGATTGGAGTTGGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169196.8 ENSMUST00000170287.8 |
||
CDS CCA 90 bp | CTCTCTTGGTTCGCTCCTGGATCCTCCTCTACTGACGAAAGCTTCTaGTTCCTTCTCACAAGCAGAGGCTCACGTCTACAACAGTTGTCT | + |
Preference number: 5 (lower is better) Translates to: LSWFAPGSSSTDESF*FLLTSRGSRLQQLS Trigger: AGACAACTGTTGTAGACGTGAGCCTCTGCTTGTGAGAAGGAACCAGAAGCTTTCGTCAGTAGAGGAGGATCCAGGAGCGAACCAAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS CCA 90 bp | GTCCTGCCATCGTCACGTGGAGTTTCTGTAGACGAGCAAATCTGCTaGTGCTATCAAAGGCCTCCTTTATCACTGCAAACCCTTCAGGTG | + |
Preference number: 5 (lower is better) Translates to: VLPSSRGVSVDEQIC*CYQRPPLSLQTLQV Trigger: CACCTGAAGGGTTTGCAGTGATAAAGGAGGCCTTTGATAGCACCAGCAGATTTGCTCGTCTACAGAAACTCCACGTGACGATGGCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | CTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATGTCAGCCACAGATCTTGTaGTTGCCGGTGAACATGTTC | + |
Preference number: 5 (lower is better) Translates to: LNDNLAPAVWPMDISSGCQPQIL*LPVNMF Trigger: GAACATGTTCACCGGCAACAACAAGATCTGTGGCTG...ACATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS TCA 90 bp | AACCTCAACTTTTCTCTCTTGGTTCGCTCCTGGATCCTCCTCTACTaGCGAAAGCTTCTGGTTCCTTCTCACAAGCAGAGGCTCACGTCT | + |
Preference number: 5 (lower is better) Translates to: NLNFSLLVRSWILLY*RKLLVPSHKQRLTS Trigger: AGACGTGAGCCTCTGCTTGTGAGAAGGAACCAGAAGCTTTCGTCAGTAGAGGAGGATCCAGGAGCGAACCAAGAGAGAAAAGTTGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 90 bp | ATACAATTCGGGCAAGCTGCCGTGCGTTTTCTCCAGGATTGTCTTTaGATGCTCCTTGAACACCTAGCATCTGGCCACATGCGATGTAGA | + |
Preference number: 5 (lower is better) Translates to: IQFGQAAVRFLQDCL*MLLEHLASGHMRCR Trigger: TCTACATCGCATGTGGCCAGATGCTAGGTGTTCAAGGAGCATGCAAAGACAATCCTGGAGAAAACGCACGGCAGCTTGCCCGAATTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169945.8 |
||
CDS CCA 90 bp | ATACAGATTGTAAGTGTCACTGTTCCCACAATAACTTCCCAGGGGTaGGAGGCCACGAAGAGGCCATGCATCCGGAAAAGTCTTGACAAC | + |
Preference number: 5 (lower is better) Translates to: IQIVSVTVPTITSQG*EATKRPCIRKSLDN Trigger: GTTGTCAAGACTTTTCCGGATGCATGGCCTCTTCGTGGCCTCCCACCCCTGGGAAGTTATTGTGGGAACAGTGACACTTACAATCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 ENSMUST00000169196.8 ENSMUST00000169966.2 ENSMUST00000170287.8 ENSMUST00000171537.2 |
||
CDS-3UTR CAA 90 bp | AGAGTTCCCACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAAATGTGGGGCCCAGGATaGCCATTCCACGAGCTATAT | + |
Preference number: 5 (lower is better) Translates to: RVPTSEESLCKEPQTSLKMWGPG*PFHELY Trigger: ATATAGCTCGTGGAATGGCAATCCTGGGCCCCACAT...TTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | AAACGAACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGACTCAGGGTAATCACTaGCTCAATGTCCATGCTGAT | + |
Preference number: 5 (lower is better) Translates to: KRTVAHICGAQSTGTIHVTQGNH*LNVHAD Trigger: ATCAGCATGGACATTGAGCAAGTGATTACCCTGAGT...CACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGTTCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS GCA 90 bp | CTGCCATCGTCACGTGGAGTTTCTGTAGACGAGCAAATCTGCTGGTaGTATCAAAGGCCTCCTTTATCACTGCAAACCCTTCAGGTGTTT | + |
Preference number: 5 (lower is better) Translates to: LPSSRGVSVDEQICW*YQRPPLSLQTLQVF Trigger: AAACACCTGAAGGGTTTGCAGTGATAAAGGAGGCCTTTGATAGCACCAGCAGATTTGCTCGTCTACAGAAACTCCACGTGACGATGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS GCA 90 bp | ATTTATGGCAGCAGGCTTCTTGTCGGTGCAATAGTTCCCACTGACTaGCAGAATCTGCATGTCAGGAAAGAACTCCTGAAGCTTCAGCAG | + |
Preference number: 5 (lower is better) Translates to: IYGSRLLVGAIVPTD*QNLHVRKELLKLQQ Trigger: CTGCTGAAGCTTCAGGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCACCGACAAGAAGCCTGCTGCCATAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | AGAGGTGAGCCCCACACTGATCACCAGTTTCCAGCTTGTGGTAGCTTTCAGAAACCACAGATCTTGTTGTaGCCGGTGAACATGTTCATG | + |
Preference number: 5 (lower is better) Translates to: RGEPHTDHQFPACGSFQKPQILL*PVNMFM Trigger: CATGAACATGTTCACCGGCAACAACAAGATCTGTGG...TTTCTGAAAGCTACCACAAGCTGGAAACTGGTGATCAGTGTGGGGCTCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | ACTGTAGCTCACATCTGTGGTGCTCAGAGCACCGGTACCATCCACGTGAGATCTGAGCCCACAAGATTCTaGTTAATGTTTACGTCAACC | + |
Preference number: 5 (lower is better) Translates to: TVAHICGAQSTGTIHVRSEPTRF*LMFTST Trigger: GGTTGACGTAAACATTAACAAGAATCTTGTGGGCTC...AGATCTCACGTGGATGGTACCGGTGCTCTGAGCACCACAGATGTGAGCTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS TCA 90 bp | TCCAATTTATGGCAGCAGGCTTCTTGTCGGTGCAATAGTTCCCACTaGCTGCCAGAATCTGCATGTCAGGAAAGAACTCCTGAAGCTTCA | + |
Preference number: 5 (lower is better) Translates to: SNLWQQASCRCNSSH*LPESACQERTPEAS Trigger: TGAAGCTTCAGGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCACCGACAAGAAGCCTGCTGCCATAAATTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | GCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGCAGTGCCCACAGATCTTGTTGTaGCCGGTGAACATGTTCATG | + |
Preference number: 5 (lower is better) Translates to: AVKECELNMRLEPANMQCPQILL*PVNMFM Trigger: CATGAACATGTTCACCGGCAACAACAAGATCTGTGG...GCACTGCATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | CTTGATTGCAAACTGATGAAGAACCCAGTCCCTGGGCCTGGGCAGTCAAAGAATCTTGGTTCAATTCTCTaGGACACATCTTCGTCCAGA | + |
Preference number: 5 (lower is better) Translates to: LDCKLMKNPVPGPGQSKNLGSIL*DTSSSR Trigger: TCTGGACGAAGATGTGTCCAAGAGAATTGAACCAAG...ATTCTTTGACTGCCCAGGCCCAGGGACTGGGTTCTTCATCAGTTTGCAATCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | GCCTGGGCAGTCAAAGAATGTGAGCTGAACATGAGGCTAGAACCAGCCAATATGGCCAGAGAGAAACACTaGGTTCAATTCTCTTGGACA | + |
Preference number: 5 (lower is better) Translates to: AWAVKECELNMRLEPANMAREKH*VQFSWT Trigger: TGTCCAAGAGAATTGAACCAAGTGTTTCTCTCTGGC...CATATTGGCTGGTTCTAGCCTCATGTTCAGCTCACATTCTTTGACTGCCCAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | AGAGTTCCCACATCTGAGGAGTCTCTGTGCAAAGAACCTCAGACGTCTCTGAAACTTGGTTCAATTCTCTaGGACACATCTTCGTCCAGA | + |
Preference number: 5 (lower is better) Translates to: RVPTSEESLCKEPQTSLKLGSIL*DTSSSR Trigger: TCTGGACGAAGATGTGTCCAAGAGAATTGAACCAAG...TTTCAGAGACGTCTGAGGTTCTTTGCACAGAGACTCCTCAGATGTGGGAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | ATCTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATTATATAAGTCTTCATTaGTGGGACCACTGGCTTCCA | + |
Preference number: 5 (lower is better) Translates to: ISMITWLQQFGLWTSPRDYISLH*WDHWLP Trigger: TGGAAGCCAGTGGTCCCACAAATGAAGACTTATATA...ATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS CCA 90 bp | TCTGCTTCCACCACTAATGGTTTTATAACCTCAACTTTTCTCTCTTaGTTCGCTCCTGGATCCTCCTCTACTGACGAAAGCTTCTGGTTC | + |
Preference number: 5 (lower is better) Translates to: SASTTNGFITSTFLS*FAPGSSSTDESFWF Trigger: GAACCAGAAGCTTTCGTCAGTAGAGGAGGATCCAGGAGCGAACCAAGAGAGAAAAGTTGAGGTTATAAAACCATTAGTGGTGGAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | CAGTTTCCAGCTTGTGGTAGCTTTCAGAAACGAACTGTAGCTCACATCTGTGGTAAAGACATAATCATCTaGACCCTTTGGGTTACGGGG | + |
Preference number: 5 (lower is better) Translates to: QFPACGSFQKRTVAHICGKDIII*TLWVTG Trigger: CCCCGTAACCCAAAGGGTCAAGATGATTATGTCTTT...ACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGGAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | TTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTAAGTACCTCTCTCACCACCTaGGCTGGAATGACGGCTTCA | + |
Preference number: 5 (lower is better) Translates to: LVPALTSLSNECLPRCVSTSLTT*AGMTAS Trigger: TGAAGCCGTCATTCCAGCCAAGGTGGTGAGAGAGGT...ACTTACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | GTAGAAAGAACAGCTAAAATACAGAATAGAGTGCTGTGCTATACGGGACACATTATGTGGGGCCCAGGATaGCCATTCCACGAGCTATAT | + |
Preference number: 5 (lower is better) Translates to: VERTAKIQNRVLCYTGHIMWGPG*PFHELY Trigger: ATATAGCTCGTGGAATGGCAATCCTGGGCCCCACAT...AATGTGTCCCGTATAGCACAGCACTCTATTCTGTATTTTAGCTGTTCTTTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | ATCTCAATGATAACCTGGCTCCAGCAGTTTGGCCTATGGACATCTCCTCGGGATTTTGGGTTACGGGGTTaGGTTTATTTTCTTCTTCTT | + |
Preference number: 5 (lower is better) Translates to: ISMITWLQQFGLWTSPRDFGLRG*VYFLLL Trigger: AAGAAGAAGAAAATAAACCAAACCCCGTAACCCAAA...ATCCCGAGGAGATGTCCATAGGCCAAACTGCTGGAGCCAGGTTATCATTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | AGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTTGTCTTGAGCTTTCTTaGAGGTCACGACGGGAGACG | + |
Preference number: 5 (lower is better) Translates to: SMMVKLGCQLDTCRKRESCLELS*RSRRET Trigger: CGTCTCCCGTCGTGACCTCAAAGAAAGCTCAAGACA...AGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | TTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTCAATGATAACCTGGCTAAAGACATAATCATCTaGACCCTTTGGGTTACGGGG | + |
Preference number: 5 (lower is better) Translates to: LVVNLTLVGRGNLNDNLAKDIII*TLWVTG Trigger: CCCCGTAACCCAAAGGGTCAAGATGATTATGTCTTT...AGCCAGGTTATCATTGAGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | CTTCTACACAAATGTCAGCTTCCCAAGACCAAACTTGAAGCATTAGATAGAATATGTCTTGAGCTTTCTTaGAGGTCACGACGGGAGACG | + |
Preference number: 5 (lower is better) Translates to: LLHKCQLPKTKLEALDRICLELS*RSRRET Trigger: CGTCTCCCGTCGTGACCTCAAAGAAAGCTCAAGACA...TATTCTATCTAATGCTTCAAGTTTGGTCTTGGGAAGCTGACATTTGTGTAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | ATGTCCATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGACCTCTCTCACCACCTaGGCTGGAATGACGGCTTCA | + |
Preference number: 5 (lower is better) Translates to: MSIHLPLDSALRFLIHRLTSLTT*AGMTAS Trigger: TGAAGCCGTCATTCCAGCCAAGGTGGTGAGAGAGGT...CAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS TCA 90 bp | TTCTTTGTCGAGGAAATGAATGACGACTGTACTGAAGACAAAGCTTaGGAAAATTGTGAAGAGGCCAGCAATACCCAGAATGTACTTGGA | + |
Preference number: 5 (lower is better) Translates to: FFVEEMNDDCTEDKA*ENCEEASNTQNVLG Trigger: TCCAAGTACATTCTGGGTATTGCTGGCCTCTTCACAATTTTCTCAAGCTTTGTCTTCAGTACAGTCGTCATTCATTTCCTCGACAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169196.8 ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | CATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTCAGCCACAGATCTTGTaGTTGCCGGTGAACATGTTC | + |
Preference number: 5 (lower is better) Translates to: HSSSTRQCIEIFNSQIACQPQIL*LPVNMF Trigger: GAACATGTTCACCGGCAACAACAAGATCTGTGGCTG...ACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | TTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTAAGTACTCAGGGTAATCACTaGCTCAATGTCCATGCTGAT | + |
Preference number: 5 (lower is better) Translates to: LVPALTSLSNECLPRCVSTQGNH*LNVHAD Trigger: ATCAGCATGGACATTGAGCAAGTGATTACCCTGAGT...ACTTACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | CTTCTACACAAATGTCAGCTTCCCAAGACCAAACTTGAAGCATTAGATAGAATAGCCAGAGAGAAACACTaGGTTCAATTCTCTTGGACA | + |
Preference number: 5 (lower is better) Translates to: LLHKCQLPKTKLEALDRIAREKH*VQFSWT Trigger: TGTCCAAGAGAATTGAACCAAGTGTTTCTCTCTGGC...TATTCTATCTAATGCTTCAAGTTTGGTCTTGGGAAGCTGACATTTGTGTAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | AGTATGATGGTTAAACTTGGTTGTCAACTTGACACTTGTAGGAAGAGGGAATCTGAGCCCACAAGATTCTaGTTAATGTTTACGTCAACC | + |
Preference number: 5 (lower is better) Translates to: SMMVKLGCQLDTCRKRESEPTRF*LMFTST Trigger: GGTTGACGTAAACATTAACAAGAATCTTGTGGGCTC...AGATTCCCTCTTCCTACAAGTGTCAAGTTGACAACCAAGTTTAACCATCATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | ACCTTAGTCCCTGCCTTAACTTCCCTTAGTAATGAATGTCTACCTAGATGTGTATCAAAGAAAATATACTaGACAGCCAAAAGGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: TLVPALTSLSNECLPRCVSKKIY*TAKRKA Trigger: AGCCTTCCTTTTGGCTGTCAAGTATATTTTCTTTGA...TACACATCTAGGTAGACATTCATTACTAAGGGAAGTTAAGGCAGGGACTAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170287.8 |
||
CDS-3UTR CAA 90 bp | CATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTAGTGAGCCCACAAGATTCTaGTTAATGTTTACGTCAACC | + |
Preference number: 5 (lower is better) Translates to: HLPLDSALRFLIHRLHVSEPTRF*LMFTST Trigger: GGTTGACGTAAACATTAACAAGAATCTTGTGGGCTC...ACTAACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000169945.8 |
||
CDS-3UTR CAA 90 bp | CATTCATCTTCCACTAGACAGTGCATTGAGATTTTTAATTCACAGATTGCATGTTATATAAGTCTTCATTaGTGGGACCACTGGCTTCCA | + |
Preference number: 5 (lower is better) Translates to: HSSSTRQCIEIFNSQIACYISLH*WDHWLP Trigger: TGGAAGCCAGTGGTCCCACAAATGAAGACTTATATA...ACATGCAATCTGTGAATTAAAAATCTCAATGCACTGTCTAGTGGAAGATGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | CTTCTACACAAATGTCAGCTTCCCAAGACCAAACTTGAAGCATTAGATAGAATATCAAAGAAAATATACTaGACAGCCAAAAGGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: LLHKCQLPKTKLEALDRISKKIY*TAKRKA Trigger: AGCCTTCCTTTTGGCTGTCAAGTATATTTTCTTTGA...TATTCTATCTAATGCTTCAAGTTTGGTCTTGGGAAGCTGACATTTGTGTAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS-3UTR CAA 90 bp | ACAAAACATGAATTTAGCAAGATGACATTGGTTACAGTCACCAGCATAAAACACTTTGGGTTACGGGGTTaGGTTTATTTTCTTCTTCTT | + |
Preference number: 5 (lower is better) Translates to: TKHEFSKMTLVTVTSIKHFGLRG*VYFLLL Trigger: AAGAAGAAGAAAATAAACCAAACCCCGTAACCCAAA...GTGTTTTATGCTGGTGACTGTAACCAATGTCATCTTGCTAAATTCATGTTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022176.15 |
||
CDS GCA 72 bp | CTGGGCCTCGAGTCATCCCATCTGCAAGGACCCGGCTaGTGGCACCTCCACCAAGGCTTATGGCTCTGCAGC | + |
Preference number: 6 (lower is better) Translates to: LGLESSHLQGPG*WHLHQGLWLCS Trigger: GCTGCAGAGCCATAAGCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | TGGAAGACGCACCACTGGGCCTCGAGTCATCCCATCTaGAAGGACCCGGCTGCTGGCACCTCCACCAAGGCT | + |
Preference number: 6 (lower is better) Translates to: WKTHHWASSHPI*KDPAAGTSTKA Trigger: AGCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS CCA 72 bp | GGCCTCGAGTCATCCCATCTGCAAGGACCCGGCTGCTaGCACCTCCACCAAGGCTTATGGCTCTGCAGCCTC | + |
Preference number: 6 (lower is better) Translates to: GLESSHLQGPGC*HLHQGLWLCSL Trigger: GAGGCTGCAGAGCCATAAGCCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | TGGAAGACGCACCACTGGGCCTCGAGTCATCCCATCTaGAAGGACCCGGCTGCTGGCACCTCCACCAAGCAA | + |
Preference number: 6 (lower is better) Translates to: WKTHHWASSHPI*KDPAAGTSTKQ Trigger: TTGCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169202.2 |
||
CDS CCA 72 bp | TTCTGCAGAGTCACAAGCACGTGGAAGACGCACCACTaGGCCTCGAGTCATCCCATCTGCAAGGACCCGGCT | + |
Preference number: 6 (lower is better) Translates to: FCRVTSTWKTHH*ASSHPICKDPA Trigger: AGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS TCA 72 bp | GCCGAAGCAGCACATGATCTCCAGCTGGCGGACGCCTaGCATGGTGCCAACTCCAATCACAAGGCATTCCAC | + |
Preference number: 6 (lower is better) Translates to: AEAAHDLQLADA*HGANSNHKAFH Trigger: GTGGAATGCCTTGTGATTGGAGTTGGCACCATGTCAGGCGTCCGCCAGCTGGAGATCATGTGCTGCTTCGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169196.8 ENSMUST00000170287.8 |
||
CDS TCA 72 bp | AGTTGGCCAACACTGACATGCAGCCGAAGCAGCACATaGTCTCCAGCTGGCGGACGCCTGACATGGTGCCAA | + |
Preference number: 6 (lower is better) Translates to: SWPTLTCSRSST*SPAGGRLTWCQ Trigger: TTGGCACCATGTCAGGCGTCCGCCAGCTGGAGATCATGTGCTGCTTCGGCTGCATGTCAGTGTTGGCCAACT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169196.8 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | TCTGTTAGTGCTGGCCACAAGACAGCCTTCCGTCGTTaGCATCGGCACCTGGTACTCCTTCCCATCCAGGCA | + |
Preference number: 6 (lower is better) Translates to: SVSAGHKTAFRR*HRHLVLLPIQA Trigger: TGCCTGGATGGGAAGGAGTACCAGGTGCCGATGGCAACGACGGAAGGCTGTCTTGTGGCCAGCACTAACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | CGTCCCCCGTCCTGGACTGGAAACGGATATAGAGGTTaGGTCCTGCCATCGTCACGTGGAGTTTCTGTAGAC | + |
Preference number: 6 (lower is better) Translates to: RPPSWTGNGYRG*VLPSSRGVSVD Trigger: GTCTACAGAAACTCCACGTGACGATGGCAGGACGCAACCTCTATATCCGTTTCCAGTCCAGGACGGGGGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS CCA 72 bp | CATCCAGGCACAGAGGCCCTGCCACTCCAACAGGGATaGGCATATATCCGATCACATTCTCACAGCAAGCTC | + |
Preference number: 6 (lower is better) Translates to: HPGTEALPLQQG*AYIRSHSHSKL Trigger: GAGCTTGCTGTGAGAATGTGATCGGATATATGCCCATCCCTGTTGGAGTGGCAGGGCCTCTGTGCCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS CCA 72 bp | AAGCCAGGTCTTTACTTCTGCAGAGTCACAAGCACGTaGAAGACGCACCACTGGGCCTCGAGTCATCCCATC | + |
Preference number: 6 (lower is better) Translates to: KPGLYFCRVTST*KTHHWASSHPI Trigger: GATGGGATGACTCGAGGCCCAGTGGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTAAAGACCTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS TCA 72 bp | GGAGGCCACGAAGAGGCCATGCATCCGGAAAAGTCTTaGCAACATTGTAGCCTCACAGTCCTTGGATCCTCG | + |
Preference number: 6 (lower is better) Translates to: GGHEEAMHPEKS*QHCSLTVLGSS Trigger: CGAGGATCCAAGGACTGTGAGGCTACAATGTTGTCAAGACTTTTCCGGATGCATGGCCTCTTCGTGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171537.2 |
||
CDS GCA 72 bp | CTGGGCCTCGAGTCATCCCATCTGCAAGGACCCGGCTaGTGGCACCTCCACCAAGCAAGGAATAATTATAAT | + |
Preference number: 6 (lower is better) Translates to: LGLESSHLQGPG*WHLHQARNNYN Trigger: ATTATAATTATTCCTTGCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169202.2 |
||
CDS CCA 72 bp | GTAAGTGTCACTGTTCCCACAATAACTTCCCAGGGGTaGGAGGCCACGAAGAGGCCATGCATCCGGAAAAGT | + |
Preference number: 6 (lower is better) Translates to: VSVTVPTITSQG*EATKRPCIRKS Trigger: ACTTTTCCGGATGCATGGCCTCTTCGTGGCCTCCCACCCCTGGGAAGTTATTGTGGGAACAGTGACACTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000022176.15 ENSMUST00000168855.2 ENSMUST00000169196.8 ENSMUST00000169966.2 ENSMUST00000170287.8 ENSMUST00000171537.2 |
||
CDS CCA 72 bp | GGCCTCGAGTCATCCCATCTGCAAGGACCCGGCTGCTaGCACCTCCACCAAGCAAGGAATAATTATAATCTC | + |
Preference number: 6 (lower is better) Translates to: GLESSHLQGPGC*HLHQARNNYNL Trigger: GAGATTATAATTATTCCTTGCTTGGTGGAGGTGCCAGCAGCCGGGTCCTTGCAGATGGGATGACTCGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169202.2 |
||
CDS TCA 72 bp | CTCCAATCACAAGGCATTCCACAAGAGCGTCAAGAGTaGATGTGGGGCCCAGGATTGCCATTCCACGAGCTA | + |
Preference number: 6 (lower is better) Translates to: LQSQGIPQERQE*MWGPGLPFHEL Trigger: TAGCTCGTGGAATGGCAATCCTGGGCCCCACATTCACTCTTGACGCTCTTGTGGAATGCCTTGTGATTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169196.8 ENSMUST00000170287.8 |
||
CDS TCA 72 bp | CTAGGACCAGCGACACACAGGCCGGGAAGAATGTCATaGACACAAAGTAGTTGGCCAACACTGACATGCAGC | + |
Preference number: 6 (lower is better) Translates to: LGPATHRPGRMS*TQSSWPTLTCS Trigger: GCTGCATGTCAGTGTTGGCCAACTACTTTGTGTTCATGACATTCTTCCCGGCCTGTGTGTCGCTGGTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | ATAACTTCCCAGGGGTGGGAGGCCACGAAGAGGCCATaGATCCGGAAAAGTCTTGACAACATTGTAGCCTCA | + |
Preference number: 6 (lower is better) Translates to: ITSQGWEATKRP*IRKSLDNIVAS Trigger: TGAGGCTACAATGTTGTCAAGACTTTTCCGGATGCATGGCCTCTTCGTGGCCTCCCACCCCTGGGAAGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171537.2 |
||
CDS TCA 72 bp | TGGCAGCAGGCTTCTTGTCGGTGCAATAGTTCCCACTaGCTGCCAGAATCTGCATGTCAGGAAAGAACTCCT | + |
Preference number: 6 (lower is better) Translates to: WQQASCRCNSSH*LPESACQERTP Trigger: AGGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCACCGACAAGAAGCCTGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000169945.8 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | AAACCCTTCAGGTGTTTCAAGCCAGGTCTTTACTTCTaGAGAGTCACAAGCACGTGGAAGACGCACCACTGG | + |
Preference number: 6 (lower is better) Translates to: KPFRCFKPGLYF*RVTSTWKTHHW Trigger: CCAGTGGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTAAAGACCTGGCTTGAAACACCTGAAGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS CCA 72 bp | TTCGCTCCTGGATCCTCCTCTACTGACGAAAGCTTCTaGTTCCTTCTCACAAGCAGAGGCTCACGTCTACAA | + |
Preference number: 6 (lower is better) Translates to: FAPGSSSTDESF*FLLTSRGSRLQ Trigger: TTGTAGACGTGAGCCTCTGCTTGTGAGAAGGAACCAGAAGCTTTCGTCAGTAGAGGAGGATCCAGGAGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS TCA 72 bp | CTGACTGCCAGAATCTGCATGTCAGGAAAGAACTCCTaGAGCTTCAGCAGTGCTTTCTCCGTACCCTTAGAG | + |
Preference number: 6 (lower is better) Translates to: LTARICMSGKNS*SFSSAFSVPLE Trigger: CTCTAAGGGTACGGAGAAAGCACTGCTGAAGCTTCAGGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | AGCAGGCTTCTTGTCGGTGCAATAGTTCCCACTGACTaGCAGAATCTGCATGTCAGGAAAGAACTCCTGAAG | + |
Preference number: 6 (lower is better) Translates to: SRLLVGAIVPTD*QNLHVRKELLK Trigger: CTTCAGGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCACCGACAAGAAGCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | CTGCATGTCAGGAAAGAACTCCTGAAGCTTCAGCAGTaGTTTCTCCGTACCCTTAGAGATCATGTTCATGCC | + |
Preference number: 6 (lower is better) Translates to: LHVRKELLKLQQ*FLRTLRDHVHA Trigger: GGCATGAACATGATCTCTAAGGGTACGGAGAAAGCACTGCTGAAGCTTCAGGAGTTCTTTCCTGACATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | AGCAGGCTTCTTGTCGGTGCAATAGTTCCCACTGACTaGCAGAATCTGCATGTCAGGAAAGAACTCCTGAAN | + |
Preference number: 6 (lower is better) Translates to: SRLLVGAIVPTD*QNLHVRKELLX Trigger: NTTCAGGAGTTCTTTCCTGACATGCAGATTCTGGCAGTCAGTGGGAACTATTGCACCGACAAGAAGCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169945.8 |
||
CDS CCA 72 bp | ATTCTCCAGTATCTGCAGACATTCTTCATTAGGTCGTaGCTCGATGGGGAGTTCAATTCCAGGCTCCTGTGT | + |
Preference number: 6 (lower is better) Translates to: ILQYLQTFFIRS*LDGEFNSRLLC Trigger: ACACAGGAGCCTGGAATTGAACTCCCCATCGAGCCACGACCTAATGAAGAATGTCTGCAGATACTGGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS CCA 72 bp | TCGTCACGTGGAGTTTCTGTAGACGAGCAAATCTGCTaGTGCTATCAAAGGCCTCCTTTATCACTGCAAACC | + |
Preference number: 6 (lower is better) Translates to: SSRGVSVDEQIC*CYQRPPLSLQT Trigger: GGTTTGCAGTGATAAAGGAGGCCTTTGATAGCACCAGCAGATTTGCTCGTCTACAGAAACTCCACGTGACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | TCTTCTTCTTCTAAAACTCTGGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCACGGCTTTCACGAGAA | + |
Preference number: 6 (lower is better) Translates to: SSSSKTLAKWLS*QIGRPSRLSRE Trigger: TTCTCGTGAAAGCCGTGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGCCAGAGTTTTAGAAGAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS GCA 72 bp | AAATCTGCTGGTGCTATCAAAGGCCTCCTTTATCACTaGAAACCCTTCAGGTGTTTCAAGCCAGGTCTTTAC | + |
Preference number: 6 (lower is better) Translates to: KSAGAIKGLLYH*KPFRCFKPGLY Trigger: GTAAAGACCTGGCTTGAAACACCTGAAGGGTTTGCAGTGATAAAGGAGGCCTTTGATAGCACCAGCAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169202.2 ENSMUST00000170287.8 |
||
CDS CAA 90 bp | AATGACAGTGTCGATTCTGTCTCTGCTTGTTCAAAGAAAATATACTaGACAGCCAAAAGGAAGGCTAAACTCAGGGTAATCACTTGCTCA | + |
Preference number: 6 (lower is better) Translates to: NDSVDSVSACSKKIY*TAKRKAKLRVITCS Trigger: TGAGCAAGTGATTACCCTGAGTTTAGCCTTCCTTTTGGCTGTCAAGTATATTTTCTTTGAACAAGCAGAGACAGAATCGACACTGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |
||
CDS TCA 72 bp | GCTTCATTTAAGCCTGTCAGTTCTTTGTCGAGGAAATaGATGACGACTGTACTGAAGACAAAGCTTGAGAAA | + |
Preference number: 6 (lower is better) Translates to: ASFKPVSSLSRK*MTTVLKTKLEK Trigger: TTTCTCAAGCTTTGTCTTCAGTACAGTCGTCATTCATTTCCTCGACAAAGAACTGACAGGCTTAAATGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022176.15 ENSMUST00000169196.8 ENSMUST00000170287.8 |
||
CDS CCA 72 bp | AGGACCAAGCCTAAAGACATAATCATCTTGACCCTTTaGGTTACGGGGTTTGGTTTATTTTCTTCTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: RTKPKDIIILTL*VTGFGLFSSSS Trigger: AGAAGAAGAAGAAAATAAACCAAACCCCGTAACCCAAAGGGTCAAGATGATTATGTCTTTAGGCTTGGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022176.15 ENSMUST00000170287.8 |