Pregenerated sensors for HMGA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056758Ensembl transcript IDs: ENSMUST00000072777.14, ENSMUST00000159699.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTTTTTATaGGCTGGCCAAAATGAGGTTTCTGTAAGGCCCATCCGAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: RCAESGQHEKLLQFL*AGQNEVSVRPIRRP Trigger: GGGTCTTCGGATGGGCCTTACAGAAACCTCATTTTGGCCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR TCA 90 bp | CACAACAGTGAGCCATCTGCCAGTCTCAGAGCGGCACGTGGCCTTTaGAGTAACCTCCCTGAAAACAGCTGGAAGAGACATGGTTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: HNSEPSASLRAARGL*SNLPENSWKRHGCL Trigger: CAAACAACCATGTCTCTTCCAGCTGTTTTCAGGGAGGTTACTTCAAAGGCCACGTGCCGCTCTGAGACTGGCAGATGGCTCACTGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR GCA 90 bp | GAGGAGTGGGGATTATTGCATCTCTGGCTAAAAGTGCAGCGTGAATaGAGAGATGGCAGTCCGAACCAAGATAATGCACCTCGGCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: EEWGLLHLWLKVQRE*RDGSPNQDNAPRLA Trigger: GGCTAGCCGAGGTGCATTATCTTGGTTCGGACTGCCATCTCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAATAATCCCCACTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | CGATGCTTCAAGGCTGACAAGTGTCATTTATGGCTAAGTGGCTTTTaGCTGTGTAGATTTCCCGAGGCGGGAAAGAGAGCTTGTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RCFKADKCHLWLSGF*LCRFPEAGKRACGL Trigger: AAGCCCACAAGCTCTCTTTCCCGCCTCGGGAAATCTACACAGCCAAAAGCCACTTAGCCATAAATGACACTTGTCAGCCTTGAAGCATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | CAGGCTTCATCTGAGGTAAGTGGTACTGCGGTCTTTCACGGACACTaGTACACAATGAAGAACAGGGAATATAGAGAGGAGAGAGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: QASSEVSGTAVFHGH*YTMKNREYREEREA Trigger: CGCCTCTCTCTCCTCTCTATATTCCCTGTTCTTCATTGTGTACCAGTGTCCGTGAAAGACCGCAGTACCACTTACCTCAGATGAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR TCA 90 bp | TGGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGCTGGCCAAAATaGGGTTTCTGTAAGGCCCATCCGAAGACCCGGAATGAGAATCTG | + |
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Preference number: 1 (lower is better) Translates to: WPTREAASVFMSWPK*GFCKAHPKTRNENL Trigger: CAGATTCTCATTCCGGGTCTTCGGATGGGCCTTACAGAAACCTCATTTTGGCCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | TCAGCTAGTTATCTCCGATGCTTCAAGGCTGACAAGTGTCATTTATaGCTAAGTGGCTTTTGGCTGTGTAGATTTCCCGAGGCGGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SASYLRCFKADKCHL*LSGFWLCRFPEAGK Trigger: CTTTCCCGCCTCGGGAAATCTACACAGCCAAAAGCCACTTAGCCATAAATGACACTTGTCAGCCTTGAAGCATCGGAGATAACTAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | GTAGCATTCAGAGGTAGTATTGAGGAGTGGGGATTATTGCATCTCTaGCTAAAAGTGCAGCGTGAATGCAGAGATGGCAGTCCGAACCAA | + |
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Preference number: 1 (lower is better) Translates to: VAFRGSIEEWGLLHL*LKVQRECRDGSPNQ Trigger: TTGGTTCGGACTGCCATCTCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAATAATCCCCACTCCTCAATACTACCTCTGAATGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | CAAGCCACTATGAGAAACTACCTCCTGGCCCAGTGGGTAACACTCTaGAAAGTCAGCACACTTAATAGGAGAGAAAGGCATAGAAACTCT | + |
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Preference number: 1 (lower is better) Translates to: QATMRNYLLAQWVTL*KVSTLNRRERHRNS Trigger: AGAGTTTCTATGCCTTTCTCTCCTATTAAGTGTGCTGACTTTCCAGAGTGTTACCCACTGGGCCAGGAGGTAGTTTCTCATAGTGGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | CTTATACTGACACAAGCCACTATGAGAAACTACCTCCTGGCCCAGTaGGTAACACTCTGGAAAGTCAGCACACTTAATAGGAGAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: LILTQATMRNYLLAQ*VTLWKVSTLNRRER Trigger: CCTTTCTCTCCTATTAAGTGTGCTGACTTTCCAGAGTGTTACCCACTGGGCCAGGAGGTAGTTTCTCATAGTGGCTTGTGTCAGTATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | AGGAATAACTTCATCAGAGATGGAAATTGCTCGGTGTGCCGAGTCTaGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGCTGGCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: RNNFIRDGNCSVCRV*PTREAASVFMSWPK Trigger: TTTTGGCCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGAGCAATTTCCATCTCTGATGAAGTTATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR TCA 90 bp | GTGAGGTTTGAGCTCCTTCAAACATGGGGGAAGGAAATCAATGAGTaGTATAGGCTGCAAGTTCGTTCCTTTGGAAGTGTGGAGGTAGTT | + |
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Preference number: 1 (lower is better) Translates to: VRFELLQTWGKEINE*YRLQVRSFGSVEVV Trigger: AACTACCTCCACACTTCCAAAGGAACGAACTTGCAGCCTATATCACTCATTGATTTCCTTCCCCCATGTTTGAAGGAGCTCAAACCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR GCA 90 bp | CAGGAAATAAGGAATAACTTCATCAGAGATGGAAATTGCTCGGTGTaGCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGC | + |
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Preference number: 1 (lower is better) Translates to: QEIRNNFIRDGNCSV*RVWPTREAASVFMS Trigger: GCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGAGCAATTTCCATCTCTGATGAAGTTATTCCTTATTTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | CAGGGCTGTAAATTCACTGTAGCATTCAGAGGTAGTATTGAGGAGTaGGGATTATTGCATCTCTGGCTAAAAGTGCAGCGTGAATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: QGCKFTVAFRGSIEE*GLLHLWLKVQRECR Trigger: TCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAATAATCCCCACTCCTCAATACTACCTCTGAATGCTACAGTGAATTTACAGCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR GCA 90 bp | TACAACATACAGGAAATAAGGAATAACTTCATCAGAGATGGAAATTaGTCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: YNIQEIRNNFIRDGN*SVCRVWPTREAASV Trigger: AACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGAGCAATTTCCATCTCTGATGAAGTTATTCCTTATTTCCTGTATGTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CCA 90 bp | ACAGAGAACGAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTTaGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGCAAACATACT | + |
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Preference number: 1 (lower is better) Translates to: TENEVRGHTKERGES*MQLIVLISFSCKHT Trigger: AGTATGTTTGCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTCGTTCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR GCA 90 bp | TATAGGCTGCAAGTTCGTTCCTTTGGAAGTGTGGAGGTAGTTCCTTaGAAATCAGGAAGTCCATTTGTTTCAATAATTCATTTGAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: YRLQVRSFGSVEVVP*KSGSPFVSIIHLRY Trigger: GTACCTCAAATGAATTATTGAAACAAATGGACTTCCTGATTTGCAAGGAACTACCTCCACACTTCCAAAGGAACGAACTTGCAGCCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCAGAGGGCACGGTGGGGGTGGCATCTaGGTGGACACAGAGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: TITDSDSTQGTENEVRGHGGGGI*VDTESH Trigger: GTGTGACTCTGTGTCCACTCAGATGCCACCCCCACC...GTGCCCTCTGACTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAACAGAGAACGAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTTGGATGGCGACTCACAACAGTaGGCCATCTGCCAGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RNRERSQRAHKGTGRKLDGDSQQ*AICQSQ Trigger: CTGAGACTGGCAGATGGCTCACTGTTGTGAGTCGCC...ATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTCGTTCTCTGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGGCGACTCACAACAGTGAGCCATCTGCCAGTCTCAGAGCGGCACGTGGCTCAACCACACACCCTTaGTTATCAGATCCACAAACT | + |
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Preference number: 2 (lower is better) Translates to: PLATHNSEPSASLRAARGSTTHP*LSDPQT Trigger: AGTTTGTGGATCTGATAAGCAAGGGTGTGTGGTTGA...GCCACGTGCCGCTCTGAGACTGGCAGATGGCTCACTGTTGTGAGTCGCCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGCTGGGGGGTGGCATCTGAGTaGACACAGAGTCACACACAA | + |
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Preference number: 2 (lower is better) Translates to: SVCRVWPTREAASVFMSWGVASE*TQSHTQ Trigger: TTGTGTGTGACTCTGTGTCCACTCAGATGCCACCCC...CCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGCGACTCACAACAGTGAGCCATCTGCCAGTCTCAGAGCGGCACGTGGCGACAAGTGTCATTTATaGCTAAGTGGCTTTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PLATHNSEPSASLRAARGDKCHL*LSGFWL Trigger: CAGCCAAAAGCCACTTAGCCATAAATGACACTTGTC...GCCACGTGCCGCTCTGAGACTGGCAGATGGCTCACTGTTGTGAGTCGCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCAGAGGGCACCACGCAGGCTTCATCTaGGGTAAGTGGTACTGCGGT | + |
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Preference number: 2 (lower is better) Translates to: TITDSDSTQGTENEVRGHHAGFI*GKWYCG Trigger: ACCGCAGTACCACTTACCTCAGATGAAGCCTGCGTG...GTGCCCTCTGACTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGGCGACTCACAACAGTGAGCCATCTGCCAGTCTCAGAGCGGCACGTGGCAACCTAGGAGCAACTTaGCTCAAAACTGTTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: PLATHNSEPSASLRAARGNLGAT*LKTVSN Trigger: ATTTGAAACAGTTTTGAGTCAAGTTGCTCCTAGGTT...GCCACGTGCCGCTCTGAGACTGGCAGATGGCTCACTGTTGTGAGTCGCCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGCTGGGTCTTTCACGGACACTaGTACACAATGAAGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: SVCRVWPTREAASVFMSWVFHGH*YTMKNR Trigger: CCTGTTCTTCATTGTGTACCAGTGTCCGTGAAAGAC...CCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGAAATTGCTCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGGGATTATTGCATCTCTaGCTAAAAGTGCAGCGTGAA | + |
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Preference number: 2 (lower is better) Translates to: EMEIARCAESGQHEKLLQGLLHL*LKVQRE Trigger: TTCACGCTGCACTTTTAGCCAGAGATGCAATAATCC...CTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGAGCAATTTCCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | GCCGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCAATGAGGGAGAGGTaGGGTTTGAGCTCCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: AVQVQSQTATLHKEQRTKSMRER*GLSSFK Trigger: TTTGAAGGAGCTCAAACCTCACCTCTCCCTCATTGA...CTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTCACGGACACTGGTACACAATGAAGAACAGGGAATATAGAGAGGAGAGACCCCTAATCCTCCTCTaGGGACTCTTGCGAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: VFHGHWYTMKNREYREERPLILL*GLLRGC Trigger: ACATCCTCGCAAGAGTCCGCAGAGGAGGATTAGGGG...TCTCTCCTCTCTATATTCCCTGTTCTTCATTGTGTACCAGTGTCCGTGAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGAAATTGCTCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGGAAGTAGAAAGACCGTaGCAGTTAAGAATAACTGGT | + |
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Preference number: 2 (lower is better) Translates to: EMEIARCAESGQHEKLLQEVERP*QLRITG Trigger: ACCAGTTATTCTTAACTGCCACGGTCTTTCTACTTC...CTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGAGCAATTTCCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAACAGAGAACGAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTTGGATGTGGAGGTAGTTCCTTaGAAATCAGGAAGTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: RNRERSQRAHKGTGRKLDVEVVP*KSGSPF Trigger: AAATGGACTTCCTGATTTGCAAGGAACTACCTCCAC...ATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTCGTTCTCTGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | GCCGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGGCAGTTAAGAATAACTaGTCACTGCAGTGTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: AVQVQSQTATLHKEQRTKAVKNN*SLQCLL Trigger: GAGAAGACACTGCAGTGACCAGTTATTCTTAACTGC...CTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACGGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCATCTCTGGCTAAAAGTGCAGCGTGAATGCAGAGATGGCAGTCCGAACCAACTTGGGTGGGTTCATTaGGTACTGTTAACCTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LHLWLKVQRECRDGSPNQLGWVH*VLLTFS Trigger: TGAAAAGGTTAACAGTACCCAATGAACCCACCCAAG...TTGGTTCGGACTGCCATCTCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGGTCTTTCACGGACACTaGTACACAATGAAGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: STREGIATSKPSKYNHRQVFHGH*YTMKNR Trigger: CCTGTTCTTCATTGTGTACCAGTGTCCGTGAAAGAC...CTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | CGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCGAGCTCCTTCAAACATaGGGGAAGGAAATCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: RPSTITDSDSTQGTENEVELLQT*GKEINE Trigger: CTCATTGATTTCCTTCCCCCATGTTTGAAGGAGCTC...GACTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | ACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGCGAGACACTGGTACACAATaGAGAACAGGGAATATAGAG | + |
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Preference number: 2 (lower is better) Translates to: TREGIATSKPSKYNHRQRDTGTQ*RTGNIE Trigger: CTCTATATTCCCTGTTCTTCATTGTGTACCAGTGTC...TCGCTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | AACTACCTCCTGGCCCAGTGGGTAACACTCTGGAAAGTCAGCACACTTAATAGGAAGGAAATCAATGAGTaGTATAGGCTGCAAGTTCGT | + |
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Preference number: 2 (lower is better) Translates to: NYLLAQWVTLWKVSTLNRKEINE*YRLQVR Trigger: ACGAACTTGCAGCCTATATCACTCATTGATTTCCTT...CCTATTAAGTGTGCTGACTTTCCAGAGTGTTACCCACTGGGCCAGGAGGTAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAAGGAAATCAATGAGTaGTATAGGCTGCAAGTTCGT | + |
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Preference number: 2 (lower is better) Translates to: IATSKPSKYNHRQRLYTRKEINE*YRLQVR Trigger: ACGAACTTGCAGCCTATATCACTCATTGATTTCCTT...CCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGTTACAGGATGTAACACGCAGGCTTCATCTGAGGTAAGTGGTACTGCGGCAGTTAAGAATAACTaGTCACTGCAGTGTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: KGVTGCNTQASSEVSGTAAVKNN*SLQCLL Trigger: GAGAAGACACTGCAGTGACCAGTTATTCTTAACTGC...CGCAGTACCACTTACCTCAGATGAAGCCTGCGTGTTACATCCTGTAACACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGTTACAGGATGTAACACGCAGGCTTCATCTGAGGTAAGTGGTACTGCGCTTGGGTGGGTTCATTaGGTACTGTTAACCTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: KGVTGCNTQASSEVSGTALGWVH*VLLTFS Trigger: TGAAAAGGTTAACAGTACCCAATGAACCCACCCAAG...CGCAGTACCACTTACCTCAGATGAAGCCTGCGTGTTACATCCTGTAACACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR CCA 90 bp | GTATTAACTTATACTGACACAAGCCACTATGAGAAACTACCTCCTGGCCCAGTGGCAAGTTCGTTCCTTTaGAAGTGTGGAGGTAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: VLTYTDTSHYEKLPPGPVASSFL*KCGGSS Trigger: GGAACTACCTCCACACTTCCAAAGGAACGAACTTGC...CACTGGGCCAGGAGGTAGTTTCTCATAGTGGCTTGTGTCAGTATAAGTTAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CAA 90 bp | AAATTCACTGTAGCATTCAGAGGTAGTATTGAGGAGTGGGGATTATaGCATCTCTGGCTAAAAGTGCAGCGTGAATGCAGAGATGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: KFTVAFRGSIEEWGL*HLWLKVQRECRDGS Trigger: ACTGCCATCTCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAATAATCCCCACTCCTCAATACTACCTCTGAATGCTACAGTGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR CAA 90 bp | AACAGAGAACGAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTaGGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGCAAACATAC | + |
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Preference number: 2 (lower is better) Translates to: NRERSQRAHKGTGRK*DAVNRLDKFLLQTY Trigger: GTATGTTTGCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTCGTTCTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR TCA 90 bp | TCCACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGTCCGAAGACCCGGAATaGGAATCTGATATTTATAAG | + |
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Preference number: 2 (lower is better) Translates to: STREGIATSKPSKYNHRQSEDPE*ESDIYK Trigger: CTTATAAATATCAGATTCTCATTCCGGGTCTTCGGA...CTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATCATGGTGGGGGTGGCATCTTCAACCACACACCCTTaGTTATCAGATCCACAAACT | + |
|
Preference number: 2 (lower is better) Translates to: LIFGVLSRFSMIMVGVASSTTHP*LSDPQT Trigger: AGTTTGTGGATCTGATAAGCAAGGGTGTGTGGTTGA...AGATGCCACCCCCACCATGATCATAGAAAATCTGCTTAGGACACCAAAGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTGAATTTTAATCTCTCCATAGCTCCTTTGGCGACTCACAACAGTGAGCCATCCCATGTCATCACTTaGGTGGGTTCATTGGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: MLNFNLSIAPLATHNSEPSHVIT*VGSLGT Trigger: AGTACCCAATGAACCCACCCAAGTGATGACATGGGA...TGGCTCACTGTTGTGAGTCGCCAAAGGAGCTATGGAGAGATTAAAATTCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTATTAACTTATACTGACACAAGCCACTATGAGAAACTACCTCCTGGCCCACGACCCAGTAAGGTTTaGTTTGGTTTTGGTGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SVLTYTDTSHYEKLPPGPRPSKV*FGFGGL Trigger: AAGCCCACCAAAACCAAACCAAACCTTACTGGGTCG...TGGGCCAGGAGGTAGTTTCTCATAGTGGCTTGTGTCAGTATAAGTTAATACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCACACTTAATAGGAGAGAAAGGCATAGAAACTCTACACAAGAAGCGTCCGAGCTCCTTCAAACATaGGGGAAGGAAATCAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSTLNRRERHRNSTQEASELLQT*GKEINE Trigger: CTCATTGATTTCCTTCCCCCATGTTTGAAGGAGCTC...GGACGCTTCTTGTGTAGAGTTTCTATGCCTTTCTCTCCTATTAAGTGTGCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CAA 90 bp | TGTTATGTTTATTGTGCAGACAGTGATAATCCACTAGAGAAGGTATaGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGCGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: CYVYCADSDNPLEKV*PQASRPSTITDSDS Trigger: AGAGTCGCTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGTGGATTATCACTGTCTGCACAATAAACATAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGCACACTTAATAGGAGAGAAAGGCATAGAAACTCTACACAAGAAGCGTCCACAGATGTGTGTGTGTaGTACAAAGTAGTGTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: VSTLNRRERHRNSTQEASTDVCV*YKVVSL Trigger: CAGTGACACTACTTTGTATCACACACACACATCTGT...GGACGCTTCTTGTGTAGAGTTTCTATGCCTTTCTCTCCTATTAAGTGTGCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGACAGTCATTAAAAGTTaGATTGTTAAACTGTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AVQVQSQTATLHKEQRTKTVIKS*IVKLCP Trigger: GGGACACAGTTTAACAATGCAACTTTTAATGACTGT...CTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGTTTATTGTGCAGACAGTGATAATCCACTAGAGAAGGTATTGCCACAAGCAAAAGTGCAGCGTGAATaGAGAGATGGCAGTCCGAAC | + |
|
Preference number: 2 (lower is better) Translates to: YVYCADSDNPLEKVLPQAKVQRE*RDGSPN Trigger: GTTCGGACTGCCATCTCTGCATTCACGCTGCACTTT...TGCTTGTGGCAATACCTTCTCTAGTGGATTATCACTGTCTGCACAATAAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGAGAAAGGCATAGAAACTCTACACAAGAAGCGTCCAAAACAAATCTGCTTGCAGCGTGTAACAAGTaGAGGGCTGTAAATTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RRERHRNSTQEASKTNLLAACNK*RAVNSL Trigger: CAGTGAATTTACAGCCCTGCACTTGTTACACGCTGC...AAGCAGATTTGTTTTGGACGCTTCTTGTGTAGAGTTTCTATGCCTTTCTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGAGAAAGGCATAGAAACTCTACACAAGAAGCGTCCAAAACAAATCTGCTTTCCCATGTCATCACTTaGGTGGGTTCATTGGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: RRERHRNSTQEASKTNLLSHVIT*VGSLGT Trigger: AGTACCCAATGAACCCACCCAAGTGATGACATGGGA...AAGCAGATTTGTTTTGGACGCTTCTTGTGTAGAGTTTCTATGCCTTTCTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGAAAGTTGGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGCAAACATACCGACCCAGTAAGGTTTaGTTTGGTTTTGGTGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GRKLDAVNRLDKFLLQTYRPSKV*FGFGGL Trigger: AAGCCCACCAAAACCAAACCAAACCTTACTGGGTCG...GTATGTTTGCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGTTTATTGTGCAGACAGTGATAATCCACTAGAGAAGGTATTGCCACAAGCAGCAGCGTGTAACAAGTaGAGGGCTGTAAATTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: YVYCADSDNPLEKVLPQAAACNK*RAVNSL Trigger: CAGTGAATTTACAGCCCTGCACTTGTTACACGCTGC...TGCTTGTGGCAATACCTTCTCTAGTGGATTATCACTGTCTGCACAATAAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGAGAAAGGCATAGAAACTCTACACAAGAAGCGTCCAAAACAAATCTGCTTGGTAGTATTGAGGAGTaGGGATTATTGCATCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RRERHRNSTQEASKTNLLGSIEE*GLLHLW Trigger: CCAGAGATGCAATAATCCCCACTCCTCAATACTACC...AAGCAGATTTGTTTTGGACGCTTCTTGTGTAGAGTTTCTATGCCTTTCTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CAA 90 bp | AGATTTCGGTTTCGCTCCTCCCATGTCATCACTTGGGTGGGTTCATaGGGTACTGTTAACCTTTTCATTAAATTCCAAAACAGGATCATT | + |
|
Preference number: 2 (lower is better) Translates to: RFRFRSSHVITWVGS*GTVNLFIKFQNRII Trigger: AATGATCCTGTTTTGGAATTTAATGAAAAGGTTAACAGTACCCAATGAACCCACCCAAGTGATGACATGGGAGGAGCGAAACCGAAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCCCATCCGAAGACCCGGAATGAGAATCTGATATTTATAAGCCACTGTTTAGAAGTAGAAAGACCGTaGCAGTTAAGAATAACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KAHPKTRNENLIFISHCLEVERP*QLRITG Trigger: ACCAGTTATTCTTAACTGCCACGGTCTTTCTACTTC...TAAACAGTGGCTTATAAATATCAGATTCTCATTCCGGGTCTTCGGATGGGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGTTTATTGTGCAGACAGTGATAATCCACTAGAGAAGGTATTGCCACAAGCACTAAACCTGGGACTGTaGAGGGATTACAAAGTGATT | + |
|
Preference number: 2 (lower is better) Translates to: YVYCADSDNPLEKVLPQALNLGL*RDYKVI Trigger: AATCACTTTGTAATCCCTTCACAGTCCCAGGTTTAG...TGCTTGTGGCAATACCTTCTCTAGTGGATTATCACTGTCTGCACAATAAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGAGTAGTGTCTAGTTCTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATCTAAACCTGGGACTGTaGAGGGATTACAAAGTGATT | + |
|
Preference number: 2 (lower is better) Translates to: RRVVSSSHLWCPKQIFYDLNLGL*RDYKVI Trigger: AATCACTTTGTAATCCCTTCACAGTCCCAGGTTTAG...ATCATAGAAAATCTGCTTAGGACACCAAAGATGAGAACTAGACACTACTCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTGAATTTTAATCTCTCCATAGCTCCTTTGGCGACTCACAACAGTGAGCCATCTAGTTCTCATCTTTaGTGTCCTAAGCAGATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: MLNFNLSIAPLATHNSEPSSSHL*CPKQIF Trigger: GAAAATCTGCTTAGGACACCAAAGATGAGAACTAGA...TGGCTCACTGTTGTGAGTCGCCAAAGGAGCTATGGAGAGATTAAAATTCAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTAGTTCCTTGCAAATCAGGAAGTCCATTTGTTTCAATAATTCATTTGAGGGACAAGTGTCATTTATaGCTAAGTGGCTTTTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: EVVPCKSGSPFVSIIHLRDKCHL*LSGFWL Trigger: CAGCCAAAAGCCACTTAGCCATAAATGACACTTGTC...CCTCAAATGAATTATTGAAACAAATGGACTTCCTGATTTGCAAGGAACTACCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGTTTATTGTGCAGACAGTGATAATCCACTAGAGAAGGTATTGCCACAAGCAACAGTCATTAAAAGTTaGATTGTTAAACTGTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: YVYCADSDNPLEKVLPQATVIKS*IVKLCP Trigger: GGGACACAGTTTAACAATGCAACTTTTAATGACTGT...TGCTTGTGGCAATACCTTCTCTAGTGGATTATCACTGTCTGCACAATAAACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR TCA 72 bp | GAGCCATCTGCCAGTCTCAGAGCGGCACGTGGCCTTTaGAGTAACCTCCCTGAAAACAGCTGGAAGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: EPSASLRAARGL*SNLPENSWKRH Trigger: ATGTCTCTTCCAGCTGTTTTCAGGGAGGTTACTTCAAAGGCCACGTGCCGCTCTGAGACTGGCAGATGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGCTGGCCCATTCAGAGGTAGTATaGAGGAGTGGGGATTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: GVPSLANTRSCFSFYELAHSEVV*RSGDYC Trigger: GCAATAATCCCCACTCCTCAATACTACCTCTGAATG...GGCCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACAGAGAACGAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTTGGATCTCTCCATAGCTCCTTaGGCGACTCACAACAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RNRERSQRAHKGTGRKLDLSIAP*ATHNSE Trigger: CTCACTGTTGTGAGTCGCCAAAGGAGCTATGGAGAG...ATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTCGTTCTCTGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGCGACATCAGAGATGGAAATaGCTCGGTGTGCCGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TREGIATSKPSKYNHRQRHQRWK*LGVPSL Trigger: CAGACTCGGCACACCGAGCAATTTCCATCTCTGATG...TCGCTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR GCA 72 bp | TTGCTCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTaGTTCAGTTTTTATGAGCTGGCCAAAATGAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLGVPSLANTRS*FSFYELAKMRF Trigger: AAACCTCATTTTGGCCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | GTAAGAGTACAGAGAAGAATGGTCGAGAACTGGGGATaGCTGAGATGCCGACCCAGTAAGGTTTGGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VRVQRRMVENWG*LRCRPSKVWFG Trigger: ACCAAACCAAACCTTACTGGGTCGGCATCTCAGCCATCCCCAGTTCTCGACCATTCTTCTCTGTACTCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR TCA 72 bp | CGAGAAGCTGCTTCAGTTTTTATGAGCTGGCCAAAATaGGGTTTCTGTAAGGCCCATCCGAAGACCCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: REAASVFMSWPK*GFCKAHPKTRN Trigger: ATTCCGGGTCTTCGGATGGGCCTTACAGAAACCTCATTTTGGCCAGCTCATAAAAACTGAAGCAGCTTCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | TTCATCAGAGATGGAAATTGCTCGGTGTGCCGAGTCTaGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FIRDGNCSVCRV*PTREAASVFMS Trigger: GCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGAGCAATTTCCATCTCTGATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGCGAGAGGAGTGGGGATTATaGCATCTCTGGCTAAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TREGIATSKPSKYNHRQREEWGL*HLWLKV Trigger: CACTTTTAGCCAGAGATGCAATAATCCCCACTCCTC...TCGCTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCCATTCAGAGGTAGTATaGAGGAGTGGGGATTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: RPSTITDSDSTQGTENEVHSEVV*RSGDYC Trigger: GCAATAATCCCCACTCCTCAATACTACCTCTGAATG...GACTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR GCA 72 bp | GGATTATTGCATCTCTGGCTAAAAGTGCAGCGTGAATaGAGAGATGGCAGTCCGAACCAAGATAATGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GLLHLWLKVQRE*RDGSPNQDNAP Trigger: AGGTGCATTATCTTGGTTCGGACTGCCATCTCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAATAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | TCTGAGGTAAGTGGTACTGCGGTCTTTCACGGACACTaGTACACAATGAAGAACAGGGAATATAGAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SEVSGTAVFHGH*YTMKNREYREE Trigger: CTCCTCTCTATATTCCCTGTTCTTCATTGTGTACCAGTGTCCGTGAAAGACCGCAGTACCACTTACCTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | AGAGGTAGTATTGAGGAGTGGGGATTATTGCATCTCTaGCTAAAAGTGCAGCGTGAATGCAGAGATGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGSIEEWGLLHL*LKVQRECRDGS Trigger: ACTGCCATCTCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAATAATCCCCACTCCTCAATACTACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | ATGAGAAACTACCTCCTGGCCCAGTGGGTAACACTCTaGAAAGTCAGCACACTTAATAGGAGAGAAAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: MRNYLLAQWVTL*KVSTLNRRERH Trigger: ATGCCTTTCTCTCCTATTAAGTGTGCTGACTTTCCAGAGTGTTACCCACTGGGCCAGGAGGTAGTTTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | GAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTTaGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EVRGHTKERGES*MQLIVLISFSC Trigger: GCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCAGAGGGCACTCATTAAAAGTTGCATaGTTAAACTGTGTCCCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: TITDSDSTQGTENEVRGHSLKVA*LNCVPR Trigger: ACGGGGGACACAGTTTAACAATGCAACTTTTAATGA...GTGCCCTCTGACTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCATTAAAAGTTGCATaGTTAAACTGTGTCCCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: AVQVQSQTATLHKEQRTKSLKVA*LNCVPR Trigger: ACGGGGGACACAGTTTAACAATGCAACTTTTAATGA...CTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR TCA 72 bp | GAGCTCCTTCAAACATGGGGGAAGGAAATCAATGAGTaGTATAGGCTGCAAGTTCGTTCCTTTGGAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ELLQTWGKEINE*YRLQVRSFGSV Trigger: CACACTTCCAAAGGAACGAACTTGCAGCCTATATCACTCATTGATTTCCTTCCCCCATGTTTGAAGGAGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | GCAGGAAGTAGAAAGACCGTGGCAGTTAAGAATAACTaGTCACTGCAGTGTCTTCTCCCTTCAAAAGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: AGSRKTVAVKNN*SLQCLLPSKDP Trigger: TGGATCTTTTGAAGGGAGAAGACACTGCAGTGACCAGTTATTCTTAACTGCCACGGTCTTTCTACTTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | TATCTCCGATGCTTCAAGGCTGACAAGTGTCATTTATaGCTAAGTGGCTTTTGGCTGTGTAGATTTCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: YLRCFKADKCHL*LSGFWLCRFPE Trigger: CTCGGGAAATCTACACAGCCAAAAGCCACTTAGCCATAAATGACACTTGTCAGCCTTGAAGCATCGGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR GCA 72 bp | GTAGAAAGACCGTGGCAGTTAAGAATAACTGGTCACTaGAGTGTCTTCTCCCTTCAAAAGATCCAACTGATG | + |
|
Preference number: 3 (lower is better) Translates to: VERPWQLRITGH*SVFSLQKIQLM Trigger: CATCAGTTGGATCTTTTGAAGGGAGAAGACACTGCAGTGACCAGTTATTCTTAACTGCCACGGTCTTTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCCAAGTACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCAAGAGACATGGTTGTTaGTTTGTTTCATTTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RPSTITDSDSTQGTENEVKRHGC*FVSFGF Trigger: GAAGCCAAATGAAACAAACAAACAACCATGTCTCTT...GACTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGTACTTGGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | GATTTCGGTTTCGCTCCTCCCATGTCATCACTTGGGTaGGTTCATTGGGTACTGTTAACCTTTTCATTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: DFGFAPPMSSLG*VHWVLLTFSLN Trigger: ATTTAATGAAAAGGTTAACAGTACCCAATGAACCCACCCAAGTGATGACATGGGAGGAGCGAAACCGAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CCA 72 bp | AAATTCACTGTAGCATTCAGAGGTAGTATTGAGGAGTaGGGATTATTGCATCTCTGGCTAAAAGTGCAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: KFTVAFRGSIEE*GLLHLWLKVQR Trigger: ACGCTGCACTTTTAGCCAGAGATGCAATAATCCCCACTCCTCAATACTACCTCTGAATGCTACAGTGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAAAGTTGGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGCAAACATACTTCAACCACACACCCTaGCTTATCAGATCCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GRKLDAVNRLDKFLLQTYFNHTP*LIRSTN Trigger: GTTTGTGGATCTGATAAGCAAGGGTGTGTGGTTGAA...GTATGTTTGCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATTATACACAAAGAAAGGAGAGTAGTGTCTAGTTCTCATCTTTGGTGTCCTTTCAACCACACACCCTaGCTTATCAGATCCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KIIHKERRVVSSSHLWCPFNHTP*LIRSTN Trigger: GTTTGTGGATCTGATAAGCAAGGGTGTGTGGTTGAA...AGGACACCAAAGATGAGAACTAGACACTACTCTCCTTTCTTTGTGTATAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR GCA 72 bp | CAAGTTCGTTCCTTTGGAAGTGTGGAGGTAGTTCCTTaGAAATCAGGAAGTCCATTTGTTTCAATAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QVRSFGSVEVVP*KSGSPFVSIIH Trigger: ATGAATTATTGAAACAAATGGACTTCCTGATTTGCAAGGAACTACCTCCACACTTCCAAAGGAACGAACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR-3UTR CAA 90 bp | GATAAGTTTCTCCTGCAAACATACTTAGCTTGCAGAAATGGTAGAGAAGTTAGACTGGAAGAGACATGGTaGTTTGTTTGTTTCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DKFLLQTYLACRNGREVRLEETW*FVCFIW Trigger: CCAAATGAAACAAACAAACAACCATGTCTCTTCCAG...TCTAACTTCTCTACCATTTCTGCAAGCTAAGTATGTTTGCAGGAGAAACTTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGATTTTCTATGATCATGGTGGGGGTGGCATCTGAGTGGACACAGAGTCACGCTGATGTGGACGGCTaGCCGGCGCCCTCACCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRFSMIMVGVASEWTQSHADVDG*PAPSPR Trigger: ACGCGGTGAGGGCGCCGGGCAGCCGTCCACATCAGC...GTGACTCTGTGTCCACTCAGATGCCACCCCCACCATGATCATAGAAAATCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | AGGAACAGAGAACGAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTTGGATGTCCCTGGGCTGATGTaGACGGCTGCCCGGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNRERSQRAHKGTGRKLDVPGLM*TAARRP Trigger: AGGGCGCCGGGCAGCCGTCCACATCAGCCCAGGGAC...ATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTCGTTCTCTGTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGTGTTACAGGATGTAACACGCAGGCTTCATCTGAGGTAAGTGGTACTGCGGCTGATGTGGACGGCTaGCCGGCGCCCTCACCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KGVTGCNTQASSEVSGTAADVDG*PAPSPR Trigger: ACGCGGTGAGGGCGCCGGGCAGCCGTCCACATCAGC...CGCAGTACCACTTACCTCAGATGAAGCCTGCGTGTTACATCCTGTAACACCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCTAAAAGTGCAGCGTGAATGCAGAGATGGCAGTCCGAACCAAGATAATGTCCCTGGGCTGATGTaGACGGCTGCCCGGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLKVQRECRDGSPNQDNVPGLM*TAARRP Trigger: AGGGCGCCGGGCAGCCGTCCACATCAGCCCAGGGAC...ATTATCTTGGTTCGGACTGCCATCTCTGCATTCACGCTGCACTTTTAGCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | AACTACCTCCTGGCCCAGTGGGTAACACTCTGGAAAGTCAGCACACTTAATAGGGCGTCCTCGCTTCTGTaGCACCGGGGCGGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NYLLAQWVTLWKVSTLNRASSLL*HRGGRL Trigger: CAACCTGCCGCCCCGGTGCCACAGAAGCGAGGACGC...CCTATTAAGTGTGCTGACTTTCCAGAGTGTTACCCACTGGGCCAGGAGGTAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR TCA 90 bp | TCCACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGAGGTTGTCCCTGGGCTaGTGTGGACGGCTGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: STREGIATSKPSKYNHRQRLSLG*CGRLPG Trigger: GCCGGGCAGCCGTCCACATCAGCCCAGGGACAACCT...CTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGATTTTCTATGATCATGGTGGGGGTGGCATCTGAGTGGACACAGAGTCACCTTGCTGCTGCTTCCTaGGTCGGCCGCGTCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRFSMIMVGVASEWTQSHLAAAS*VGRVLA Trigger: AGCGAGGACGCGGCCGACCCAGGAAGCAGCAGCAAG...GTGACTCTGTGTCCACTCAGATGCCACCCCCACCATGATCATAGAAAATCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | TCCACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGCTTGCTGCTGCTTCCTaGGTCGGCCGCGTCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: STREGIATSKPSKYNHRQLAAAS*VGRVLA Trigger: AGCGAGGACGCGGCCGACCCAGGAAGCAGCAGCAAG...CTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCAAAAGATCCAACTGATGCTGAGGTAGAAATTGAATGTCGGCGCCCCCTAGTTGGCTCTTGCTGCTaGTTCCTGGGTCGGCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKDPTDAEVEIECRRPLVGSCC*FLGRPR Trigger: ACGCGGCCGACCCAGGAAGCAGCAGCAAGAGCCAAC...TAGGGGGCGCCGACATTCAATTTCTACCTCAGCATCAGTTGGATCTTTTGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGCTGGCCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVCRVWPTREAASVFMSWPRSAS*PFFSNG Trigger: ACCATTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...CCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGTCAGCACACTTAATAGGAGAGAAAGGCATAGAAACTCTACACAAGAAAGGTTGTCCCTGGGCTaGTGTGGACGGCTGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: WKVSTLNRRERHRNSTQERLSLG*CGRLPG Trigger: GCCGGGCAGCCGTCCACATCAGCCCAGGGACAACCT...TTCTTGTGTAGAGTTTCTATGCCTTTCTCTCCTATTAAGTGTGCTGACTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAAAGTTGGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGCAAACATACGCGGCAGGTTGTCCCTaGGCTGATGTGGACGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRKLDAVNRLDKFLLQTYAAGCP*ADVDGC Trigger: GCAGCCGTCCACATCAGCCCAGGGACAACCTGCCGC...GTATGTTTGCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCATAGAAACTCTACACAAGAAGCGTCCAAAACAAATCTGCTTGAGACAGCGGCAGGTTGTCCCTaGGCTGATGTGGACGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERHRNSTQEASKTNLLETAAGCP*ADVDGC Trigger: GCAGCCGTCCACATCAGCCCAGGGACAACCTGCCGC...TGTCTCAAGCAGATTTGTTTTGGACGCTTCTTGTGTAGAGTTTCTATGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | ACAATCACAGACAGCGACTCTACACAAGGAACAGAGAACGAAGTCAGAGGGCACGGCTCTTGTTTTTGCTaGCTTTGGGTCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TITDSDSTQGTENEVRGHGSCFC*LWVFLW Trigger: CCAGAGGAAGACCCAAAGGCAGCAAAAACAAGAGCC...GTGCCCTCTGACTTCGTTCTCTGTTCCTTGTGTAGAGTCGCTGTCTGTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | TCGGTGTGCCGAGTCTGGCCAACACGAGAAGCTGCTTCAGTTTTTATGAGCTGGTTCTCCAATGGTCTCTaGTTTCTTCTGGGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVCRVWPTREAASVFMSWFSNGL*FLLGCF Trigger: AAAGCAGCCCAGAAGAAAGCAGAGACCATTGGAGAA...CCAGCTCATAAAAACTGAAGCAGCTTCTCGTGTTGGCCAGACTCGGCACACCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGTGTTACAGGATGTAACACGCAGGCTTCATCTGAGGTAAGTGGTACTGCGGTCTCTGCTTTCTTCTaGGCTGCTTTAGAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGVTGCNTQASSEVSGTAVSAFF*AALEGL Trigger: GAGCCCCTCTAAAGCAGCCCAGAAGAAAGCAGAGAC...CGCAGTACCACTTACCTCAGATGAAGCCTGCGTGTTACATCCTGTAACACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCCCATGTCATCACTTGGGTGGGTTCATTGGGTACTGTTAACCTTTTCACCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: APPMSSLGWVHWVLLTFSPRSAS*PFFSNG Trigger: ACCATTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...TGAAAAGGTTAACAGTACCCAATGAACCCACCCAAGTGATGACATGGGAGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | GATAAGTTTCTCCTGCAAACATACTTAGCTTGCAGAAATGGTAGAGAAGTTAGAGTTGGCTCTTGCTGCTaGTTCCTGGGTCGGCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DKFLLQTYLACRNGREVRVGSCC*FLGRPR Trigger: ACGCGGCCGACCCAGGAAGCAGCAGCAAGAGCCAAC...TCTAACTTCTCTACCATTTCTGCAAGCTAAGTATGTTTGCAGGAGAAACTTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATCATGGTGGGGGTGGCGGCTCTTGTTTTTGCTaGCTTTGGGTCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHLWCPKQIFYDHGGGGGSCFC*LWVFLW Trigger: CCAGAGGAAGACCCAAAGGCAGCAAAAACAAGAGCC...GCCACCCCCACCATGATCATAGAAAATCTGCTTAGGACACCAAAGATGAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | CTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATCATGGTGGGGGTGGCATCTAGGGGCTCTTGTTTTTaGTGCCTTTGGGTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIFGVLSRFSMIMVGVASRGSCF*CLWVFL Trigger: GAGGAAGACCCAAAGGCAGCAAAAACAAGAGCCCCT...AGATGCCACCCCCACCATGATCATAGAAAATCTGCTTAGGACACCAAAGATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | TCCACTAGAGAAGGTATTGCCACAAGCAAGCCGTCCAAGTACAATCACAGACAGTTCTCCAATGGTCTCTaGTTTCTTCTGGGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STREGIATSKPSKYNHRQFSNGL*FLLGCF Trigger: AAAGCAGCCCAGAAGAAAGCAGAGACCATTGGAGAA...CTGTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CAA 72 bp | CGAAGTCAGAGGGCACACAAAGGAACGGGGAGAAAGTaGGATGCAGTTAATCGTCTTGATAAGTTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSQRAHKGTGRK*DAVNRLDKFLL Trigger: CAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCCCGTTCCTTTGTGTGCCCTCTGACTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | AAGATTATACACAAAGAAAGGAGAGTAGTGTCTAGTTCTCATCTTTGGTGTCCTTCACAGGTTGGCTCTTaGTGCTGCTTCCTGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KIIHKERRVVSSSHLWCPSQVGS*CCFLGR Trigger: CCGACCCAGGAAGCAGCAGCAAGAGCCAACCTGTGA...AGGACACCAAAGATGAGAACTAGACACTACTCTCCTTTCTTTGTGTATAATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAAGTTGGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGCAAACATACTCCTCTGCGGACTCTTaGGAGGATGTCTCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRKLDAVNRLDKFLLQTYSSADS*EDVSSV Trigger: GACTGAAGAGACATCCTCGCAAGAGTCCGCAGAGGA...GTATGTTTGCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072777.14 |
||
| CDS-3UTR CCA 90 bp | GGGAGAAAGTTGGATGCAGTTAATCGTCTTGATAAGTTTCTCCTGCAAACATACGTCTCTGCTTTCTTCTaGGCTGCTTTAGAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRKLDAVNRLDKFLLQTYVSAFF*AALEGL Trigger: GAGCCCCTCTAAAGCAGCCCAGAAGAAAGCAGAGAC...GTATGTTTGCAGGAGAAACTTATCAAGACGATTAACTGCATCCAACTTTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CAA 72 bp | GTAGCATTCAGAGGTAGTATTGAGGAGTGGGGATTATaGCATCTCTGGCTAAAAGTGCAGCGTGAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VAFRGSIEEWGL*HLWLKVQRECR Trigger: TCTGCATTCACGCTGCACTTTTAGCCAGAGATGCAATAATCCCCACTCCTCAATACTACCTCTGAATGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CAA 72 bp | ACAGTCATGTTGAATTTTAATCTCTCCATAGCTCCTTaGGCGACTCACAACAGTGAGCCATCTGCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVMLNFNLSIAP*ATHNSEPSASL Trigger: GAGACTGGCAGATGGCTCACTGTTGTGAGTCGCCAAAGGAGCTATGGAGAGATTAAAATTCAACATGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| 3UTR CAA 72 bp | TATTGTGCAGACAGTGATAATCCACTAGAGAAGGTATaGCCACAAGCAAGCCGTCCAAGTACAATCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YCADSDNPLEKV*PQASRPSTITD Trigger: GTCTGTGATTGTACTTGGACGGCTTGCTTGTGGCAATACCTTCTCTAGTGGATTATCACTGTCTGCACAATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGTAGTGTCTAGTTCTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATAGGGGCTCTTGTTTTTaGTGCCTTTGGGTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRVVSSSHLWCPKQIFYDRGSCF*CLWVFL Trigger: GAGGAAGACCCAAAGGCAGCAAAAACAAGAGCCCCT...ATCATAGAAAATCTGCTTAGGACACCAAAGATGAGAACTAGACACTACTCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAGCGGCACGTGGCCTTTGAAGTAACCTCCCTGAAAACAGCTGGAAGAGACGAGAGGGCTCACAGGTaGGCTCTTGCTGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SERHVAFEVTSLKTAGRDERAHR*ALAAAS Trigger: GGAAGCAGCAGCAAGAGCCAACCTGTGAGCCCTCTC...GTCTCTTCCAGCTGTTTTCAGGGAGGTTACTTCAAAGGCCACGTGCCGCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGCGACTCACAACAGTGAGCCATCTGCCAGTCTCAGAGCGGCACGTGGCGATTGTGGGGCAGACTaGAGGTTTGTGATTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLATHNSEPSASLRAARGDCGAD*RFVIHG Trigger: GCCATGAATCACAAACCTCAAGTCTGCCCCACAATC...GCCACGTGCCGCTCTGAGACTGGCAGATGGCTCACTGTTGTGAGTCGCCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGAAAGGCATAGAAACTCTACACAAGAAGCGTCCAAAACAAATCTGCTTCTCACAGGTTGGCTCTaGCTGCTGCTTCCTGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRERHRNSTQEASKTNLLLTGWL*LLLPGS Trigger: CGACCCAGGAAGCAGCAGCAAGAGCCAACCTGTGAG...AAGCAGATTTGTTTTGGACGCTTCTTGTGTAGAGTTTCTATGCCTTTCTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGTAGTGTCTAGTTCTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATCTCACAGGTTGGCTCTaGCTGCTGCTTCCTGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRVVSSSHLWCPKQIFYDLTGWL*LLLPGS Trigger: CGACCCAGGAAGCAGCAGCAAGAGCCAACCTGTGAG...ATCATAGAAAATCTGCTTAGGACACCAAAGATGAGAACTAGACACTACTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATCATGGTGGGGGTGGCGCTTTAGAGGGGCTCTaGTTTTTGCTGCCTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSHLWCPKQIFYDHGGGGALEGL*FLLPLG Trigger: ACCCAAAGGCAGCAAAAACAAGAGCCCCTCTAAAGC...GCCACCCCCACCATGATCATAGAAAATCTGCTTAGGACACCAAAGATGAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCATCCGAAGACCCGGAATGAGAATCTGATATTTATAAGCCACTGTTTACTCCTCTGCGGACTCTaGCGAGGATGTCTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAHPKTRNENLIFISHCLLLCGL*RGCLFS Trigger: ACTGAAGAGACATCCTCGCAAGAGTCCGCAGAGGAG...TAAACAGTGGCTTATAAATATCAGATTCTCATTCCGGGTCTTCGGATGGGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072777.14 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCATCCGAAGACCCGGAATGAGAATCTGATATTTATAAGCCACTGTTTACTTCTTCTGAACGACTaGTTGTGGCCATTTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAHPKTRNENLIFISHCLLLLND*LWPFPR Trigger: CCTAGGAAATGGCCACAACAAGTCGTTCAGAAGAAG...TAAACAGTGGCTTATAAATATCAGATTCTCATTCCGGGTCTTCGGATGGGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGTAGTGTCTAGTTCTCATCTTTGGTGTCCTAAGCAGATTTTCTATGATTTGTTTTTGCTGCCTTaGGGTCTTCCTCTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRVVSSSHLWCPKQIFYDLFLLP*GLPLGL Trigger: GAGACCCAGAGGAAGACCCAAAGGCAGCAAAAACAA...ATCATAGAAAATCTGCTTAGGACACCAAAGATGAGAACTAGACACTACTCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | GATAAGTTTCTCCTGCAAACATACTTAGCTTGCAGAAATGGTAGAGAAGTTAGATTGTTTTTGCTGCCTTaGGGTCTTCCTCTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DKFLLQTYLACRNGREVRLFLLP*GLPLGL Trigger: GAGACCCAGAGGAAGACCCAAAGGCAGCAAAAACAA...TCTAACTTCTCTACCATTTCTGCAAGCTAAGTATGTTTGCAGGAGAAACTTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS-3UTR CAA 90 bp | AAGATTATACACAAAGAAAGGAGAGTAGTGTCTAGTTCTCATCTTTGGTGTCCTGCTTTAGAGGGGCTCTaGTTTTTGCTGCCTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KIIHKERRVVSSSHLWCPALEGL*FLLPLG Trigger: ACCCAAAGGCAGCAAAAACAAGAGCCCCTCTAAAGC...AGGACACCAAAGATGAGAACTAGACACTACTCTCCTTTCTTTGTGTATAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS CCA 72 bp | GTGGCACCGGGGCGGCAGGTTGTCCCTGGGCTGATGTaGACGGCTGCCCGGCGCCCTCACCGCGTGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VAPGRQVVPGLM*TAARRPHRVRS Trigger: TGAGCGCACGCGGTGAGGGCGCCGGGCAGCCGTCCACATCAGCCCAGGGACAACCTGCCGCCCCGGTGCCAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS CCA 72 bp | GAGAGGGCTCACAGGTTGGCTCTTGCTGCTGCTTCCTaGGTCGGCCGCGTCCTCGCTTCTGTGGCACCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ERAHRLALAAAS*VGRVLASVAPG Trigger: CCCCGGTGCCACAGAAGCGAGGACGCGGCCGACCCAGGAAGCAGCAGCAAGAGCCAACCTGTGAGCCCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
||
| CDS CAA 90 bp | GCTTTCTTCTGGGCTGCTTTAGAGGGGCTCTTGTTTTTGCTGCCTTaGGGTCTTCCTCTGGGTCTCTTAGGAGAGGGCTCACAGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: AFFWAALEGLLFLLP*GLPLGLLGEGSQVG Trigger: GCCAACCTGTGAGCCCTCTCCTAAGAGACCCAGAGGAAGACCCAAAGGCAGCAAAAACAAGAGCCCCTCTAAAGCAGCCCAGAAGAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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| CDS CAA 90 bp | ATGGTCTCTGCTTTCTTCTGGGCTGCTTTAGAGGGGCTCTTGTTTTaGCTGCCTTTGGGTCTTCCTCTGGGTCTCTTAGGAGAGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: MVSAFFWAALEGLLF*LPLGLPLGLLGEGS Trigger: TGAGCCCTCTCCTAAGAGACCCAGAGGAAGACCCAAAGGCAGCAAAAACAAGAGCCCCTCTAAAGCAGCCCAGAAGAAAGCAGAGACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072777.14 ENSMUST00000159699.2 |
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