RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMG20A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032329

Ensembl transcript IDs: ENSMUST00000034879.5, ENSMUST00000213242.2, ENSMUST00000214771.2, ENSMUST00000214869.2, ENSMUST00000215269.2, ENSMUST00000217518.2

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCATGGAGTGAGAGAAGGTGGAACAGACCAGCTCTATACAACCTaGCTGAAGCCCAGCCACTTATGGCAGCTGCTGGGAGAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: EHGVREGGTDQLYTT*LKPSHLWQLLGERG
Trigger: GCCTCTCTCTCCCAGCAGCTGCCATAAGTGGCTGGGCTTCAGTCAGGTTGTATAGAGCTGGTCTGTTCCACCTTCTCTCACTCCATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp GACACCCCACTTCTGAAGACTGAAGGGCTGGCGCTAAGCGTCCTATaGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAAC +
Preference number: 1 (lower is better)
Translates to: DTPLLKTEGLALSVL*VSTHQRLTIKPVHN
Trigger: GTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCATAGGACGCTTAGCGCCAGCCCTTCAGTCTTCAGAAGTGGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR CCA 90 bp AGCTCAAGAGACTTCTTCCACAGAAGTTCCCATCATCCTAACGCATaGACCTGCGCACCGAGGACAGTGCTGCTGAGTTTCCACTTAGTC +
Preference number: 1 (lower is better)
Translates to: SSRDFFHRSSHHPNA*TCAPRTVLLSFHLV
Trigger: GACTAAGTGGAAACTCAGCAGCACTGTCCTCGGTGCGCAGGTCCATGCGTTAGGATGATGGGAACTTCTGTGGAAGAAGTCTCTTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp ACACAGGCTGCAAAGCTGGCTGGCTGTGCAGCAGTGAGTGATGACTaGGTCTTTTCAGTGCATGGAGTTCAATGTGCTCACATAGCTCGT +
Preference number: 1 (lower is better)
Translates to: TQAAKLAGCAAVSDD*VFSVHGVQCAHIAR
Trigger: ACGAGCTATGTGAGCACATTGAACTCCATGCACTGAAAAGACCCAGTCATCACTCACTGCTGCACAGCCAGCCAGCTTTGCAGCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp AAGCTCTGTTCTTTGGAGTCCCAGCAGGGTAGTGATGGAGAAGATTaGGCCCATCCAATGAGAATTCTCCTTCAAAGTCCCGCTGAGCCA +
Preference number: 1 (lower is better)
Translates to: KLCSLESQQGSDGED*AHPMRILLQSPAEP
Trigger: TGGCTCAGCGGGACTTTGAAGGAGAATTCTCATTGGATGGGCCCAATCTTCTCCATCACTACCCTGCTGGGACTCCAAAGAACAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 90 bp GAAGGAGGATGTCAGTCTCGGGGTCGCTGTTGTCAGAAGAATGTATaGAGCTCCACTTCAGCAGAAATGGAAATGAGAGGACTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: EGGCQSRGRCCQKNV*SSTSAEMEMRGLQE
Trigger: TTCCTGGAGTCCTCTCATTTCCATTTCTGCTGAAGTGGAGCTGCATACATTCTTCTGACAACAGCGACCCCGAGACTGACATCCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp ACAGGGAGGGATCTGTCCTCTGCCCCGTCTCAGTTCAAATGTTCATaGGAAGCTTCTCATTCTGCACAAGTGCACACACTACATCTTGGA +
Preference number: 1 (lower is better)
Translates to: TGRDLSSAPSQFKCS*EASHSAQVHTLHLG
Trigger: TCCAAGATGTAGTGTGTGCACTTGTGCAGAATGAGAAGCTTCCCATGAACATTTGAACTGAGACGGGGCAGAGGACAGATCCCTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp GCCAGAAGAGGCTTGACATTACAAGCAGCTGTCAGCCACCTACCATaGATGCTAGGAAATGATCTCAAATCCTCTGGAGTAGCAGTGAGT +
Preference number: 1 (lower is better)
Translates to: ARRGLTLQAAVSHLP*MLGNDLKSSGVAVS
Trigger: ACTCACTGCTACTCCAGAGGATTTGAGATCATTTCCTAGCATCCATGGTAGGTGGCTGACAGCTGCTTGTAATGTCAAGCCTCTTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 90 bp AGAAGATTGGGCCCATCCAATGAGAATTCTCCTTCAAAGTCCCGCTaGGCCACAAAACCCAGAGGTCAGAAAATGGAGATGTGTGACTTG +
Preference number: 1 (lower is better)
Translates to: RRLGPSNENSPSKSR*ATKPRGQKMEMCDL
Trigger: CAAGTCACACATCTCCATTTTCTGACCTCTGGGTTTTGTGGCTCAGCGGGACTTTGAAGGAGAATTCTCATTGGATGGGCCCAATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 90 bp AGGGAGAAGGAGTCATTAAGTGATCTGGCACTTGTGACTTTGTGTTaGAGGGCTTGTGAACAGAGTGCAGCCATGAACAAGGGTACAAAG +
Preference number: 1 (lower is better)
Translates to: REKESLSDLALVTLC*RACEQSAAMNKGTK
Trigger: CTTTGTACCCTTGTTCATGGCTGCACTCTGTTCACAAGCCCTGCAACACAAAGTCACAAGTGCCAGATCACTTAATGACTCCTTCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR TCA 90 bp TGCTGTGACAAGAACTCCATCGTGGAGATTCCCTTGCTATCCTACTaGATTCTGGCTATGCGAATGTGTCTAGACGAGATGAGGTATCAC +
Preference number: 1 (lower is better)
Translates to: CCDKNSIVEIPLLSY*ILAMRMCLDEMRYH
Trigger: GTGATACCTCATCTCGTCTAGACACATTCGCATAGCCAGAATTCAGTAGGATAGCAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 90 bp CCTCTTTATATGCCTCTCTCCACCAGAGCCTGTCTTTCTCTCCTATaGATACCAGTCATTGGAACAGGGCCATCTGAACCAGTCTTACTT +
Preference number: 1 (lower is better)
Translates to: PLYMPLSTRACLSLL*IPVIGTGPSEPVLL
Trigger: AAGTAAGACTGGTTCAGATGGCCCTGTTCCAATGACTGGTATTCATAGGAGAGAAAGACAGGCTCTGGTGGAGAGAGGCATATAAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR GCA 90 bp GAGTTTCCACTTAGTCAGATGTCGGCTGCTTTCCAACACCAAATGTaGATTAACTTTCCTCCTCCCTCTCTGCCAATGACCTTTTCCTCA +
Preference number: 1 (lower is better)
Translates to: EFPLSQMSAAFQHQM*INFPPPSLPMTFSS
Trigger: TGAGGAAAAGGTCATTGGCAGAGAGGGAGGAGGAAAGTTAATGCACATTTGGTGTTGGAAAGCAGCCGACATCTGACTAAGTGGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 90 bp AGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATaGCTTTTTGTGAGCTCAAGAGACTTCTTCCACAGAAGTTCCCAT +
Preference number: 1 (lower is better)
Translates to: SWWLQRKAKHKQSPP*LFVSSRDFFHRSSH
Trigger: ATGGGAACTTCTGTGGAAGAAGTCTCTTGAGCTCACAAAAAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp GAAGGAAGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTGGTaGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTT +
Preference number: 1 (lower is better)
Translates to: EGSCLFHRFHRFGSW*LQRKAKHKQSPPCL
Trigger: AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp AGAGAAGGAAGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTaGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGC +
Preference number: 1 (lower is better)
Translates to: REGSCLFHRFHRFGS*WLQRKAKHKQSPPC
Trigger: GCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCTTCCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 90 bp TACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTTTTGTaGGCTCAAGAGACTTCTTCCACAGAAGTTCCCATCATCCTAACG +
Preference number: 1 (lower is better)
Translates to: YRGKQNISRVHHAFL*AQETSSTEVPIILT
Trigger: CGTTAGGATGATGGGAACTTCTGTGGAAGAAGTCTCTTGAGCTCACAAAAAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 90 bp GCTTCATATAGTCTCTTTTCACTTTCTTTTTGCAGAATTAGACATTaGACCCAGACCCGGGCAAGGCAGGCAACTGATCTGCTATGTGCT +
Preference number: 1 (lower is better)
Translates to: ASYSLFSLSFCRIRH*TQTRARQATDLLCA
Trigger: AGCACATAGCAGATCAGTTGCCTGCCTTGCCCGGGTCTGGGTTCAATGTCTAATTCTGCAAAAAGAAAGTGAAAAGAGACTATATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 90 bp CTCCTCACTGTGCTAGACACAAGAACCACAAAGATTCTGCTATTCTaGTATTCTTTTCCTTCCCCATTGAGTTTCTGGTGGTTCAGCTGT +
Preference number: 1 (lower is better)
Translates to: LLTVLDTRTTKILLF*YSFPSPLSFWWFSC
Trigger: ACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGTGTCTAGCACAGTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 90 bp TGGGCCTTGAAATTGTGCTTTTTCTGCCTCAACCCTCTGATATTCTaGTCTTCTAAGCACTGTGACACAAGTAAGAATCAACTGTCCATC +
Preference number: 1 (lower is better)
Translates to: WALKLCFFCLNPLIF*SSKHCDTSKNQLSI
Trigger: GATGGACAGTTGATTCTTACTTGTGTCACAGTGCTTAGAAGATCAGAATATCAGAGGGTTGAGGCAGAAAAAGCACAATTTCAAGGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 90 bp ACCTCAGTGTCTGCAGGCAAGAGCACACACAGCACTATGTTAACATaGAAGAGGGAACTTGATGACTTTATCAGTTATGTAACAGAGGAT +
Preference number: 1 (lower is better)
Translates to: TSVSAGKSTHSTMLT*KRELDDFISYVTED
Trigger: ATCCTCTGTTACATAACTGATAAAGTCATCAAGTTCCCTCTTTCATGTTAACATAGTGCTGTGTGTGCTCTTGCCTGCAGACACTGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR GCA 90 bp GATAATGGGCTCAGCATGCTCTGCTTTGGTTCCAAAGATCTCAGCTaGCACCTCTATCCTTGTGCTCTAGAGCATAAAAGAAAAATAAAA +
Preference number: 1 (lower is better)
Translates to: DNGLSMLCFGSKDLS*HLYPCALEHKRKIK
Trigger: TTTTATTTTTCTTTTATGCTCTAGAGCACAAGGATAGAGGTGGCAGCTGAGATCTTTGGAACCAAAGCAGAGCATGCTGAGCCCATTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 90 bp TATTCTTTTCCTTCCCCATTGAGTTTCTGGTGGTTCAGCTGTTCCTaGCCTCCCAGAAACATAATTCCTATTTCTACCTCCCTCTTTATA +
Preference number: 1 (lower is better)
Translates to: YSFPSPLSFWWFSCS*PPRNIIPISTSLFI
Trigger: TATAAAGAGGGAGGTAGAAATAGGAATTATGTTTCTGGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 90 bp ATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTGGTaGTTCAGCTGTTCCTGGCCTCCCAGAAACATAATTCCTATTTCT +
Preference number: 1 (lower is better)
Translates to: ILLFWYSFPSPLSFW*FSCSWPPRNIIPIS
Trigger: AGAAATAGGAATTATGTTTCTGGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 90 bp AAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTaGTGGTTCAGCTGTTCCTGGCCTCCCAGAAACATAATTCCTATT +
Preference number: 1 (lower is better)
Translates to: KILLFWYSFPSPLSF*WFSCSWPPRNIIPI
Trigger: AATAGGAATTATGTTTCTGGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 90 bp CTAACAAAAGCTTTCTTCACTGTGACAACAGAGTTAGTTTCTGTCTaGGAGGAGAGAGATCAGATGGTTCTTGCTTTATTCCCTATAGTG +
Preference number: 1 (lower is better)
Translates to: LTKAFFTVTTELVSV*EERDQMVLALFPIV
Trigger: CACTATAGGGAATAAAGCAAGAACCATCTGATCTCTCTCCTCTCAGACAGAAACTAACTCTGTTGTCACAGTGAAGAAAGCTTTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 90 bp CTGTTCACAACCTCTCGGACTGTAGCTATGAAGTTTTCGTTGTCTTaGGGATTAGCTAAAATTATACTGTGCAATCTGTTCATGTATGAG +
Preference number: 1 (lower is better)
Translates to: LFTTSRTVAMKFSLS*GLAKIILCNLFMYE
Trigger: CTCATACATGAACAGATTGCACAGTATAATTTTAGCTAATCCCCAAGACAACGAAAACTTCATAGCTACAGTCCGAGAGGTTGTGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR TCA 90 bp TGCATCTATGTATTAACTGTAGTACTGTACTCCTCCAAATATATGTaGATGGTGACAGACCTGCATCTGGTAAATAGTATACTAGAGACT +
Preference number: 1 (lower is better)
Translates to: CIYVLTVVLYSSKYM*MVTDLHLVNSILET
Trigger: AGTCTCTAGTATACTATTTACCAGATGCAGGTCTGTCACCATTCACATATATTTGGAGGAGTACAGTACTACAGTTAATACATAGATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR-3UTR TCA 90 bp CAGGAGAGAACGCAGTGTGGAGAAGTGTGGTGCAGCCACAGCATGGGGGCTCTGGGGGCTGGCACCCACTaGGCACCACGCAGGGCACGA +
Preference number: 2 (lower is better)
Translates to: QERTQCGEVWCSHSMGALGAGTH*APRRAR
Trigger: TCGTGCCCTGCGTGGTGCTCAGTGGGTGCCAGCCCC...CAGAGCCCCCATGCTGTGGCTGCACCACACTTCTCCACACTGCGTTCTCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR TCA 90 bp TGGTGCAGCCACAGCATGGGGGCTCTGGCTTATGGGCAGATTGTGAGGGACCATCTCCCTCTCTGCCAATaGCCTTTTCCTCAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: WCSHSMGALAYGQIVRDHLPLCQ*PFPQQK
Trigger: CTTTTGCTGAGGAAAAGGTCATTGGCAGAGAGGGAG...ATGGTCCCTCACAATCTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp CAGGAGAGAACGCAGTGTGGAGAAGTGTGGTGCAGCCACAGCATGGGGGCTCTGCCAGAGGTCAGAAAATaGAGATGTGTGACTTGGTGG +
Preference number: 2 (lower is better)
Translates to: QERTQCGEVWCSHSMGALPEVRK*RCVTWW
Trigger: CCACCAAGTCACACATCTCCATTTTCTGACCTCTGG...CAGAGCCCCCATGCTGTGGCTGCACCACACTTCTCCACACTGCGTTCTCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp TGGTGCAGCCACAGCATGGGGGCTCTGGCTTATGGGCAGATTGTGAGGGACCATAGAAGCTCTGTTCTTTaGAGTCCCAGCAGGGTAGTG +
Preference number: 2 (lower is better)
Translates to: WCSHSMGALAYGQIVRDHRSSVL*SPSRVV
Trigger: CACTACCCTGCTGGGACTCCAAAGAACAGAGCTTCT...ATGGTCCCTCACAATCTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR GCA 90 bp CCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCAACAGATGGGCAGGGCACGAAACAGTaGCTGGCTCCACAGGGCACT +
Preference number: 2 (lower is better)
Translates to: PMTFSSAKVLHKTLPTDGQGTKQ*LAPQGT
Trigger: AGTGCCCTGTGGAGCCAGGCACTGTTTCGTGCCCTG...CCCATCTGTTGGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 90 bp GGCAGGAAGCATCTGGTTGAAGACAGACAAACTCCCAGAACCGGCTaGGGTGTCCTTCTGCCACAGACAGTGAGTTCTAGCATGGGCTTA +
Preference number: 2 (lower is better)
Translates to: GRKHLVEDRQTPRTG*GVLLPQTVSSSMGL
Trigger: TAAGCCCATGCTAGAACTCACTGTCTGTGGCAGAAGGACACCCAAGCCGGTTCTGGGAGTTTGTCTGTCTTCAACCAGATGCTTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR TCA 90 bp TCCCTCTCTGCCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCGTGACTTGGTGGGAGTaGAGAAAAGCAGTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: SLSANDLFLSKSAPQDTAVTWWE*RKAVPQ
Trigger: CTGGGGGACTGCTTTTCTTCACTCCCACCAAGTCAC...GGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGGCAGAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR GCA 90 bp AGTGTGGTGCAGCCACAGCATGGGGGCTCTGGCTTATGGGCAGATTGTGAGGGAGGAAGCTTCTCATTCTaGACAAGTGCACACACTACA +
Preference number: 2 (lower is better)
Translates to: SVVQPQHGGSGLWADCEGGSFSF*TSAHTT
Trigger: TGTAGTGTGTGCACTTGTGCAGAATGAGAAGCTTCC...TCCCTCACAATCTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp TGGTGCAGCCACAGCATGGGGGCTCTGGCTTATGGGCAGATTGTGAGGGACCATAATCTTCCTTTTTGCTaGGGAGAGAAGGAGGATGTC +
Preference number: 2 (lower is better)
Translates to: WCSHSMGALAYGQIVRDHNLPFC*GEKEDV
Trigger: GACATCCTCCTTCTCTCCCCAGCAAAAAGGAAGATT...ATGGTCCCTCACAATCTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 90 bp GAAGCCCAGCCACTTATGGCAGCTGCTGGGAGAGAGAGGCAGTATTaGAAAGGAAGCTACTGCTGTGACAAGAACTCCATCGTGGAGATT +
Preference number: 2 (lower is better)
Translates to: EAQPLMAAAGRERQY*KGSYCCDKNSIVEI
Trigger: AATCTCCACGATGGAGTTCTTGTCACAGCAGTAGCTTCCTTTCAAATACTGCCTCTCTCTCCCAGCAGCTGCCATAAGTGGCTGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR GCA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTGAGGGATCTGTCCTCTaGCCCGTCTCAGTTCAAATG +
Preference number: 2 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLEGSVL*PVSVQM
Trigger: CATTTGAACTGAGACGGGGCAGAGGACAGATCCCTC...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp GGAGAGAAGGAAGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTGGTGGCAAGAGAGTGAGGGGCTaGACACTTCCAGAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: GEKEAVFSTDFIDSAVGGKRVRG*TLPELH
Trigger: GTGCAGCTCTGGAAGTGTCCAGCCCCTCACTCTCTT...GCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCTTCCTTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp GGCTCAGCATGCTCTGCTTTGGTTCCAAAGATCTCAGCTGCCACCTCTATCCTTCAGGACCAGGAAGGATaGAGGGAGCATTGTCCTTTA +
Preference number: 2 (lower is better)
Translates to: GSACSALVPKISAATSILQDQEG*REHCPL
Trigger: TAAAGGACAATGCTCCCTCCATCCTTCCTGGTCCTG...AAGGATAGAGGTGGCAGCTGAGATCTTTGGAACCAAAGCAGAGCATGCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp GGAGAGAAGGAAGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTGGTGGCCGGCTTTGCTGTGGCTaGGATTCCATGTCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: GEKEAVFSTDFIDSAVGGRLCCG*DSMSEQ
Trigger: CTGCTCAGACATGGAATCCCAGCCACAGCAAAGCCG...GCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCTTCCTTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp CAGAGGATCCCTATTCTTAGGAAATACAAAAGTCTTCTGGGGGTAAAGGGCCAGCTCCCTCTGCCTCAGTaGCCTTTTACCCAGGGCATG +
Preference number: 2 (lower is better)
Translates to: QRIPILRKYKSLLGVKGQLPLPQ*PFTQGM
Trigger: CATGCCCTGGGTAAAAGGCCACTGAGGCAGAGGGAG...CTGGCCCTTTACCCCCAGAAGACTTTTGTATTTCCTAAGAATAGGGATCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CAA 90 bp CAGAGCTGCACACAGGGCATTTCTACAGAGTTCACGCATCCATCTTaGTTGCTCCCTCACACAGCTTCCTGGGATGAAAGCACTTCACTT +
Preference number: 2 (lower is better)
Translates to: QSCTQGISTEFTHPS*LLPHTASWDESTSL
Trigger: AAGTGAAGTGCTTTCATCCCAGGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGTGAACTCTGTAGAAATGCCCTGTGTGCAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 90 bp GAATATGTCATGTCTATGGAGGTGCCTACACAGGCCAGAAGAGGCTaGACATTACAAGCAGCTGTCAGCCACCTACCATGGATGCTAGGA +
Preference number: 2 (lower is better)
Translates to: EYVMSMEVPTQARRG*TLQAAVSHLPWMLG
Trigger: TCCTAGCATCCATGGTAGGTGGCTGACAGCTGCTTGTAATGTCAAGCCTCTTCTGGCCTGTGTAGGCACCTCCATAGACATGACATATTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CAA 90 bp AGCTGCACACAGGGCATTTCTACAGAGTTCACGCATCCATCTTTGTaGCTCCCTCACACAGCTTCCTGGGATGAAAGCACTTCACTTACT +
Preference number: 2 (lower is better)
Translates to: SCTQGISTEFTHPSL*LPHTASWDESTSLT
Trigger: AGTAAGTGAAGTGCTTTCATCCCAGGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGTGAACTCTGTAGAAATGCCCTGTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 90 bp TATGGGAGGGAGAAGGAGTCATTAAGTGATCTGGCACTTGTGACTTaGTGTTGCAGGGCTTGTGAACAGAGTGCAGCCATGAACAAGGGT +
Preference number: 2 (lower is better)
Translates to: YGREKESLSDLALVT*CCRACEQSAAMNKG
Trigger: ACCCTTGTTCATGGCTGCACTCTGTTCACAAGCCCTGCAACACAAAGTCACAAGTGCCAGATCACTTAATGACTCCTTCTCCCTCCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR-3UTR TCA 90 bp TCTCTGCCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCAACACTGGGATTCCATGTCTaGGCAGGAGTAATGCTCAGA +
Preference number: 2 (lower is better)
Translates to: SLPMTFSSAKVLHKTLPTLGFHV*AGVMLR
Trigger: TCTGAGCATTACTCCTGCTCAGACATGGAATCCCAG...TGTTGGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp TCCACAGATTTCATAGATTCGGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAGACACTGCCAACAGATaGGGACTGGCGGCTTTGCTG +
Preference number: 2 (lower is better)
Translates to: STDFIDSAVGGYRGKQNIDTANR*GLAALL
Trigger: CAGCAAAGCCGCCAGTCCCCATCTGTTGGCAGTGTC...TATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 90 bp AAGAAGGACAGGACTTCCCCTGCCCATACTGAGTTTCTGTATGATTaGGGGAAAGATGGACCCTATGGGAGGGAGAAGGAGTCATTAAGT +
Preference number: 2 (lower is better)
Translates to: KKDRTSPAHTEFLYD*GKDGPYGREKESLS
Trigger: ACTTAATGACTCCTTCTCCCTCCCATAGGGTCCATCTTTCCCCAAATCATACAGAAACTCAGTATGGGCAGGGGAAGTCCTGTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR-3UTR TCA 90 bp TGGAACAGACCAGCTCTATACAACCTGACTGAAGCCCAGCCACTTATGGCAGCTAAGCACTTCACTTACTaGCAATTCTTTCACAGGGAG +
Preference number: 2 (lower is better)
Translates to: WNRPALYNLTEAQPLMAAKHFTY*QFFHRE
Trigger: CTCCCTGTGAAAGAATTGTCAGTAAGTGAAGTGCTT...AGCTGCCATAAGTGGCTGGGCTTCAGTCAGGTTGTATAGAGCTGGTCTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR TCA 90 bp GAAGCTACTGCTGTGACAAGAACTCCATCGTGGAGATTCCCTTGCTATCCTACTCAGCAGAAATGGAAATaGGAGGACTCCAGGAAGACT +
Preference number: 2 (lower is better)
Translates to: EATAVTRTPSWRFPCYPTQQKWK*EDSRKT
Trigger: AGTCTTCCTGGAGTCCTCTCATTTCCATTTCTGCTG...AGTAGGATAGCAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCAGTAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR TCA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTGAAAATGGAGATGTGTaGCTTGGTGGGAGTGAAGAA +
Preference number: 2 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLENGDV*LGGSEE
Trigger: TTCTTCACTCCCACCAAGTCACACATCTCCATTTTC...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR TCA 90 bp CACACAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCAGGCAAGAGATACGTATaGGAAAGCTGGGCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: HTEQPCLQNQTKPNQTKPGKRYV*ESWASL
Trigger: GAGACTTGCCCAGCTTTCTCATACGTATCTCTTGCC...TGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR-3UTR GCA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACCACAGACAGTTTAATTaGCTAGGAGACAATTTTAGC +
Preference number: 2 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDHRQFN*LGDNFS
Trigger: GCTAAAATTGTCTCCTAGGCAATTAAACTGTCTGTG...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR-3UTR GCA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTAGAAATCTTCCTTTTTaGTGGGGAGAGAAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLRNLPF*WGEKED
Trigger: ATCCTCCTTCTCTCCCCAGCAAAAAGGAAGATTTCT...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CCA 90 bp CAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCAAACCGAAAGATGGACCCTATaGGAGGGAGAAGGAGTCATT +
Preference number: 2 (lower is better)
Translates to: QSNPVSKTKRNQTKPNQTERWTL*EGEGVI
Trigger: AATGACTCCTTCTCCCTCCCATAGGGTCCATCTTTC...GGTTTGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR CAA 90 bp CAGACAGGCAGGCTAGAAGGAAGGGCTCTTCTTAGGCTTTGTCACTaGACCACCCACATGGTTCTGAGTATCAAATTAGGTTTAATGGTA +
Preference number: 2 (lower is better)
Translates to: QTGRLEGRALLRLCH*TTHMVLSIKLGLMV
Trigger: TACCATTAAACCTAATTTGATACTCAGAACCATGTGGGTGGTCAAGTGACAAAGCCTAAGAAGAGCCCTTCCTTCTAGCCTGCCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR-3UTR GCA 90 bp CAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCAAACCCTTGTGACTTTGTGTTaGAGGGCTTGTGAACAGAGT +
Preference number: 2 (lower is better)
Translates to: QSNPVSKTKRNQTKPNQTLVTLC*RACEQS
Trigger: ACTCTGTTCACAAGCCCTGCAACACAAAGTCACAAG...GGTTTGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR-3UTR CCA 90 bp CATCCAATGAGAATTCTCCTTCAAAGTCCCGCTGAGCCACAAAACCCAGAGGTCCAGTTCAAATGTTCATaGGAAGCTTCTCATTCTGCA +
Preference number: 2 (lower is better)
Translates to: HPMRILLQSPAEPQNPEVQFKCS*EASHSA
Trigger: TGCAGAATGAGAAGCTTCCCATGAACATTTGAACTG...GACCTCTGGGTTTTGTGGCTCAGCGGGACTTTGAAGGAGAATTCTCATTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 90 bp AGAACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATaGAGTTTCTGGTGGTTCAGCTGTTCCTGGCCTCCCAGAAACATA +
Preference number: 2 (lower is better)
Translates to: RTTKILLFWYSFPSP*SFWWFSCSWPPRNI
Trigger: TATGTTTCTGGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CAA 90 bp GTTTCTAGAATCCTTTCGGCTCATAACCCCTTAGGACAACAAATCTaGGGACAGTTTCTCCTCACTGTGCTAGACACAAGAACCACAAAG +
Preference number: 2 (lower is better)
Translates to: VSRILSAHNPLGQQI*GQFLLTVLDTRTTK
Trigger: CTTTGTGGTTCTTGTGTCTAGCACAGTGAGGAGAAACTGTCCCAAGATTTGTTGTCCTAAGGGGTTATGAGCCGAAAGGATTCTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR TCA 90 bp CCTCACTGTGCTAGACACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTAGGCCAGAAGAGGCTTaGCATTACAAGCAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: PHCARHKNHKDSAILVFFRPEEA*HYKQLS
Trigger: TGACAGCTGCTTGTAATGTCAAGCCTCTTCTGGCCT...AAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGTGTCTAGCACAGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR TCA 90 bp CAGGCAACTGATCTGCTATGTGCTACCACCCAAACCCCTTTGTATTTTCCTTTATCTGCCTCAACCCTCTaGTATTCTGATCTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: QATDLLCATTQTPLYFPLSASTL*YSDLLS
Trigger: GCTTAGAAGATCAGAATATCAGAGGGTTGAGGCAGA...TAAAGGAAAATACAAAGGGGTTTGGGTGGTAGCACATAGCAGATCAGTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR GCA 90 bp TGTGACAACAGAGTTAGTTTCTGTCTGAGAGGAGAGAGATCAGATGGTTCTTGCTGGGCCTTGAAATTGTaGTTTTTCTGCCTCAACCCT +
Preference number: 2 (lower is better)
Translates to: CDNRVSFCLRGERSDGSCWALKL*FFCLNP
Trigger: AGGGTTGAGGCAGAAAAAGCACAATTTCAAGGCCCA...GCAAGAACCATCTGATCTCTCTCCTCTCAGACAGAAACTAACTCTGTTGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR CCA 90 bp GGCTCAGCATGCTCTGCTTTGGTTCCAAAGATCTCAGCTGCCACCTCTATCCTTGTAAGAAAACTGGAGTaGGATTGTAACAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: GSACSALVPKISAATSILVRKLE*DCNNEK
Trigger: TTTCTCATTGTTACAATCCCACTCCAGTTTTCTTAC...AAGGATAGAGGTGGCAGCTGAGATCTTTGGAACCAAAGCAGAGCATGCTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 90 bp GAGATGAGGTATCACATCTGTAAAGAGGAGAATGATCGATCATCTTaGGACCAAGCCATAGCTTTATCTGGCCGTGAAGATCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: EMRYHICKEENDRSS*DQAIALSGREDQCY
Trigger: ATAGCACTGATCTTCACGGCCAGATAAAGCTATGGCTTGGTCCAAAGATGATCGATCATTCTCCTCTTTACAGATGTGATACCTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR TCA 90 bp CCTCACTGTGCTAGACACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTAGCCTAGATGGGCCTTaGAATTGTGCTTTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: PHCARHKNHKDSAILVFFSLDGP*NCAFSA
Trigger: GGCAGAAAAAGCACAATTTCAAGGCCCATCTAGGCT...AAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGTGTCTAGCACAGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR GCA 90 bp AGACACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTACCTCCCTCTTTATATaGCTCTCTCCACCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: RHKNHKDSAILVFFSFPITSLFI*LSPPEP
Trigger: AGGCTCTGGTGGAGAGAGGCATATAAAGAGGGAGGT...AATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR CCA 90 bp ACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTGGGTCAGCCACCTACCATaGATGCTAGGAAATGATCTC +
Preference number: 2 (lower is better)
Translates to: TTKILLFWYSFPSPLSFWVSHLP*MLGNDL
Trigger: GAGATCATTTCCTAGCATCCATGGTAGGTGGCTGAC...CCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR TCA 90 bp ACAACAAATCTTGGGACAGTTTCTCCTCACTGTGCTAGACACAAGAACCACAAAATGGATGCTAGGAAATaGTCTCAAATCCTCTGGAGT +
Preference number: 2 (lower is better)
Translates to: TTNLGTVSPHCARHKNHKMDARK*SQILWS
Trigger: ACTCCAGAGGATTTGAGATCATTTCCTAGCATCCAT...TTTGTGGTTCTTGTGTCTAGCACAGTGAGGAGAAACTGTCCCAAGATTTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR TCA 90 bp ACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTACAAAGCCAGCAGCCTaGATTTCTCTCCACAACTTG +
Preference number: 2 (lower is better)
Translates to: TRTTKILLFWYSFPSPLSTKPAA*ISLHNL
Trigger: CAAGTTGTGGAGAGAAATTCAGGCTGCTGGCTTTGT...ACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CAA 90 bp GGGTGGCACTGGTCAATTTACGTTACTACTCCAGGTCTCAACACCTaGCTTCATATAGTCTCTTTTCACTTTCTTTTTGCAGAATTAGAC +
Preference number: 2 (lower is better)
Translates to: GWHWSIYVTTPGLNT*LHIVSFHFLFAELD
Trigger: GTCTAATTCTGCAAAAAGAAAGTGAAAAGAGACTATATGAAGCAAGGTGTTGAGACCTGGAGTAGTAACGTAAATTGACCAGTGCCACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR TCA 90 bp CTATGTATTAACTGTAGTACTGTACTCCTCCAAATATATGTGAATGGTGACAGAGTGATCTGGCACTTGTaGCTTTGTGTTGCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: LCINCSTVLLQIYVNGDRVIWHL*LCVAGL
Trigger: AAGCCCTGCAACACAAAGTCACAAGTGCCAGATCAC...TCTGTCACCATTCACATATATTTGGAGGAGTACAGTACTACAGTTAATACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR-3UTR TCA 90 bp ACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTAACCCTCTGATATTCTaGTCTTCTAAGCACTGTGAC +
Preference number: 2 (lower is better)
Translates to: TRTTKILLFWYSFPSPLSNPLIF*SSKHCD
Trigger: GTCACAGTGCTTAGAAGATCAGAATATCAGAGGGTT...ACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR TCA 90 bp GAGGAGAGAGATCAGATGGTTCTTGCTTTATTCCCTATAGTGGTAAAATTTGCTACAAAGACTTTGCTCTaGGACTGCAGACATAGACTT +
Preference number: 2 (lower is better)
Translates to: EERDQMVLALFPIVVKFATKTLL*DCRHRL
Trigger: AAGTCTATGTCTGCAGTCTCAGAGCAAAGTCTTTGT...AGCAAATTTTACCACTATAGGGAATAAAGCAAGAACCATCTGATCTCTCTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR CCA 90 bp GAGGAGAGAGATCAGATGGTTCTTGCTTTATTCCCTATAGTGGTAAAATTTGCTTTGACAGTAGCTAAGTaGGTGGCACTGGTCAATTTA +
Preference number: 2 (lower is better)
Translates to: EERDQMVLALFPIVVKFALTVAK*VALVNL
Trigger: TAAATTGACCAGTGCCACCCACTTAGCTACTGTCAA...AGCAAATTTTACCACTATAGGGAATAAAGCAAGAACCATCTGATCTCTCTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR TCA 90 bp CACAGACAGTTTAATTGCCTAGGAGACAATTTTAGCCTCGAAGACAGGAAGTTTGTGAATCTGAACGTCTaGGTGACTTTAATAAGTATG +
Preference number: 2 (lower is better)
Translates to: HRQFNCLGDNFSLEDRKFVNLNV*VTLISM
Trigger: CATACTTATTAAAGTCACTCAGACGTTCAGATTCAC...AAACTTCCTGTCTTCGAGGCTAAAATTGTCTCCTAGGCAATTAAACTGTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR-3UTR GCA 90 bp AGACACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTAAATTGTGCTTTTTCTaGCTCAACCCTCTGATATTC +
Preference number: 2 (lower is better)
Translates to: RHKNHKDSAILVFFSFPIKLCFF*LNPLIF
Trigger: GAATATCAGAGGGTTGAGGCAGAAAAAGCACAATTT...AATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR GCA 90 bp ATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTTGGTATTTCTGACACTAATGTAGTTTaGTCCACAGACAGTTTAATT +
Preference number: 2 (lower is better)
Translates to: ILCNLFMYESMVSTVGISDTNVV*STDSLI
Trigger: AATTAAACTGTCTGTGGAGCAAACTACATTAGTGTC...AGAAATACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR GCA 72 bp ATGCAGAGCCTGGCAGTCCAGGCCCTGGCCTCCCTCTaGCTCAGTGGCCTTTTACCCAGGGCATGGCGAGCT +
Preference number: 3 (lower is better)
Translates to: MQSLAVQALASL*LSGLLPRAWRA
Trigger: AGCTCGCCATGCCCTGGGTAAAAGGCCACTGAGGCAGAGGGAGGCCAGGGCCTGGACTGCCAGGCTCTGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR GCA 72 bp AGCACACAGGAGAGAACGCAGTGTGGAGAAGTGTGGTaGAGCCACAGCATGGGGGCTCTGGCTTATGGGCAG +
Preference number: 3 (lower is better)
Translates to: STQERTQCGEVW*SHSMGALAYGQ
Trigger: CTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCACACTTCTCCACACTGCGTTCTCTCCTGTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 72 bp AGTGTGGTGCAGCCACAGCATGGGGGCTCTGGCTTATaGGCAGATTGTGAGGGACCATACTCCATCCCCCTG +
Preference number: 3 (lower is better)
Translates to: SVVQPQHGGSGL*ADCEGPYSIPL
Trigger: CAGGGGGATGGAGTATGGTCCCTCACAATCTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp GGACTGGCGGCTTTGCTGTGGCTGGGATTCCATGTCTaGGCAGGAGTAATGCTCAGAGATCAGCAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: GLAALLWLGFHV*AGVMLRDQQAG
Trigger: TCCTGCCTGCTGATCTCTGAGCATTACTCCTGCTCAGACATGGAATCCCAGCCACAGCAAAGCCGCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 72 bp AAAGTGCTCCACAAGACACTGCCAACAGATGGGGACTaGCGGCTTTGCTGTGGCTGGGATTCCATGTCTGAG +
Preference number: 3 (lower is better)
Translates to: KVLHKTLPTDGD*RLCCGWDSMSE
Trigger: CTCAGACATGGAATCCCAGCCACAGCAAAGCCGCCAGTCCCCATCTGTTGGCAGTGTCTTGTGGAGCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 72 bp CTCAGCAAAAGTGCTCCACAAGACACTGCCAACAGATaGGGACTGGCGGCTTTGCTGTGGCTGGGATTCCAT +
Preference number: 3 (lower is better)
Translates to: LSKSAPQDTANR*GLAALLWLGFH
Trigger: ATGGAATCCCAGCCACAGCAAAGCCGCCAGTCCCCATCTGTTGGCAGTGTCTTGTGGAGCACTTTTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp GAGAAGGTGGAACAGACCAGCTCTATACAACCTGACTaGAGCCCAGCCACTTATGGCAGCTGCTGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: EKVEQTSSIQPD*SPATYGSCWER
Trigger: TCTCTCCCAGCAGCTGCCATAAGTGGCTGGGCTTCAGTCAGGTTGTATAGAGCTGGTCTGTTCCACCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp GTGAGAGAAGGTGGAACAGACCAGCTCTATACAACCTaGCTGAAGCCCAGCCACTTATGGCAGCTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: VREGGTDQLYTT*LKPSHLWQLLG
Trigger: TCCCAGCAGCTGCCATAAGTGGCTGGGCTTCAGTCAGGTTGTATAGAGCTGGTCTGTTCCACCTTCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 72 bp GACTATCTAATAGAGCACACAGGAGAGAACGCAGTGTaGAGAAGTGTGGTGCAGCCACAGCATGGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: DYLIEHTGENAV*RSVVQPQHGGS
Trigger: AGAGCCCCCATGCTGTGGCTGCACCACACTTCTCCACACTGCGTTCTCTCCTGTGTGCTCTATTAGATAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CAA 90 bp GCTGTGGCTGGGATTCCATGTCTGAGCAGGAGTAATGCTCAGAGATCAGCAGGCTTCACGCATCCATCTTaGTTGCTCCCTCACACAGCT +
Preference number: 3 (lower is better)
Translates to: AVAGIPCLSRSNAQRSAGFTHPS*LLPHTA
Trigger: AGCTGTGTGAGGGAGCAACAAAGATGGATGCGTGAA...GCCTGCTGATCTCTGAGCATTACTCCTGCTCAGACATGGAATCCCAGCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp TGTCTATGGAGGTGCCTACACAGGCCAGAAGAGGCTTaGCATTACAAGCAGCTGTCAGCCACCTACCATGGA +
Preference number: 3 (lower is better)
Translates to: CLWRCLHRPEEA*HYKQLSATYHG
Trigger: TCCATGGTAGGTGGCTGACAGCTGCTTGTAATGTCAAGCCTCTTCTGGCCTGTGTAGGCACCTCCATAGACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp GCAAAGCTGGCTGGCTGTGCAGCAGTGAGTGATGACTaGGTCTTTTCAGTGCATGGAGTTCAATGTGCTCAC +
Preference number: 3 (lower is better)
Translates to: AKLAGCAAVSDD*VFSVHGVQCAH
Trigger: GTGAGCACATTGAACTCCATGCACTGAAAAGACCCAGTCATCACTCACTGCTGCACAGCCAGCCAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CAA 90 bp TGGAACAGACCAGCTCTATACAACCTGACTGAAGCCCAGCCACTTATGGCAGCTGTCTCGGGGTCGCTGTaGTCAGAAGAATGTATGCAG +
Preference number: 3 (lower is better)
Translates to: WNRPALYNLTEAQPLMAAVSGSL*SEECMQ
Trigger: CTGCATACATTCTTCTGACAACAGCGACCCCGAGAC...AGCTGCCATAAGTGGCTGGGCTTCAGTCAGGTTGTATAGAGCTGGTCTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CAA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTACGCATCCATCTTTGTaGCTCCCTCACACAGCTTCC +
Preference number: 3 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLTHPSL*LPHTAS
Trigger: GGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGT...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CAA 90 bp GGAGAGAAGGAAGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTGGTGGCAGGATGGAGGGAGCATaGTCCTTTAGGGCAGCAACC +
Preference number: 3 (lower is better)
Translates to: GEKEAVFSTDFIDSAVGGRMEGA*SFRAAT
Trigger: GGTTGCTGCCCTAAAGGACAATGCTCCCTCCATCCT...GCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCTTCCTTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp ATTGAACCCAGACCCGGGCAAGGCAGGCAACTGATCTaGTATGTGCTACCACCCAAACCCCTTTGTATTTTC +
Preference number: 3 (lower is better)
Translates to: IEPRPGQGRQLI*YVLPPKPLCIF
Trigger: GAAAATACAAAGGGGTTTGGGTGGTAGCACATAGCAGATCAGTTGCCTGCCTTGCCCGGGTCTGGGTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 72 bp GGCCCATCCAATGAGAATTCTCCTTCAAAGTCCCGCTaGGCCACAAAACCCAGAGGTCAGAAAATGGAGATG +
Preference number: 3 (lower is better)
Translates to: GPSNENSPSKSR*ATKPRGQKMEM
Trigger: CATCTCCATTTTCTGACCTCTGGGTTTTGTGGCTCAGCGGGACTTTGAAGGAGAATTCTCATTGGATGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp AGCAGGGTAGTGATGGAGAAGATTGGGCCCATCCAATaGGAATTCTCCTTCAAAGTCCCGCTGAGCCACAAA +
Preference number: 3 (lower is better)
Translates to: SRVVMEKIGPIQ*EFSFKVPLSHK
Trigger: TTTGTGGCTCAGCGGGACTTTGAAGGAGAATTCTCATTGGATGGGCCCAATCTTCTCCATCACTACCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp AGATGGACCCTATGGGAGGGAGAAGGAGTCATTAAGTaGTCTGGCACTTGTGACTTTGTGTTGCAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: RWTLWEGEGVIK*SGTCDFVLQGL
Trigger: CAAGCCCTGCAACACAAAGTCACAAGTGCCAGATCACTTAATGACTCCTTCTCCCTCCCATAGGGTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR GCA 72 bp GCTGGGAGAGAGAGGCAGTATTTGAAAGGAAGCTACTaGTGTGACAAGAACTCCATCGTGGAGATTCCCTTG +
Preference number: 3 (lower is better)
Translates to: AGRERQYLKGSY*CDKNSIVEIPL
Trigger: CAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCAGTAGCTTCCTTTCAAATACTGCCTCTCTCTCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 72 bp TCTTTGGAGTCCCAGCAGGGTAGTGATGGAGAAGATTaGGCCCATCCAATGAGAATTCTCCTTCAAAGTCCC +
Preference number: 3 (lower is better)
Translates to: SLESQQGSDGED*AHPMRILLQSP
Trigger: GGGACTTTGAAGGAGAATTCTCATTGGATGGGCCCAATCTTCTCCATCACTACCCTGCTGGGACTCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CAA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTATGGAGATGTGTGACTaGGTGGGAGTGAAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLMEMCD*VGVKKS
Trigger: GCTTTTCTTCACTCCCACCAAGTCACACATCTCCAT...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp TGTCAGTCTCGGGGTCGCTGTTGTCAGAAGAATGTATaGAGCTCCACTTCAGCAGAAATGGAAATGAGAGGA +
Preference number: 3 (lower is better)
Translates to: CQSRGRCCQKNV*SSTSAEMEMRG
Trigger: TCCTCTCATTTCCATTTCTGCTGAAGTGGAGCTGCATACATTCTTCTGACAACAGCGACCCCGAGACTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp AAGGGATGCTGTACAGGAAGGCATTACCTCAGTGTCTaGAGGCAAGAGCACACACAGCACTATGTTAACATG +
Preference number: 3 (lower is better)
Translates to: KGCCTGRHYLSV*RQEHTQHYVNM
Trigger: CATGTTAACATAGTGCTGTGTGTGCTCTTGCCTGCAGACACTGAGGTAATGCCTTCCTGTACAGCATCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp CCTTCCCCATTGAGTTTCTGGTGGTTCAGCTGTTCCTaGCCTCCCAGAAACATAATTCCTATTTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: PSPLSFWWFSCS*PPRNIIPISTS
Trigger: GGAGGTAGAAATAGGAATTATGTTTCTGGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR CAA 90 bp CACACAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCACTGGCACTTGTGACTTaGTGTTGCAGGGCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: HTEQPCLQNQTKPNQTKPLALVT*CCRACE
Trigger: TTCACAAGCCCTGCAACACAAAGTCACAAGTGCCAG...TGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR TCA 72 bp GAGAGAGAGGCAGTATTTGAAAGGAAGCTACTGCTGTaGCAAGAACTCCATCGTGGAGATTCCCTTGCTATC +
Preference number: 3 (lower is better)
Translates to: EREAVFERKLLL*QELHRGDSLAI
Trigger: GATAGCAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCAGTAGCTTCCTTTCAAATACTGCCTCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp CTCAGCATGCTCTGCTTTGGTTCCAAAGATCTCAGCTaGCACCTCTATCCTTGTGCTCTAGAGCATAAAAGA +
Preference number: 3 (lower is better)
Translates to: LSMLCFGSKDLS*HLYPCALEHKR
Trigger: TCTTTTATGCTCTAGAGCACAAGGATAGAGGTGGCAGCTGAGATCTTTGGAACCAAAGCAGAGCATGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp ACTGCTGTGACAAGAACTCCATCGTGGAGATTCCCTTaGTATCCTACTGAATTCTGGCTATGCGAATGTGTC +
Preference number: 3 (lower is better)
Translates to: TAVTRTPSWRFP*YPTEFWLCECV
Trigger: GACACATTCGCATAGCCAGAATTCAGTAGGATAGCAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp GAGTCATTAAGTGATCTGGCACTTGTGACTTTGTGTTaGAGGGCTTGTGAACAGAGTGCAGCCATGAACAAG +
Preference number: 3 (lower is better)
Translates to: ESLSDLALVTLC*RACEQSAAMNK
Trigger: CTTGTTCATGGCTGCACTCTGTTCACAAGCCCTGCAACACAAAGTCACAAGTGCCAGATCACTTAATGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR CCA 72 bp GGCTTGACATTACAAGCAGCTGTCAGCCACCTACCATaGATGCTAGGAAATGATCTCAAATCCTCTGGAGTA +
Preference number: 3 (lower is better)
Translates to: GLTLQAAVSHLP*MLGNDLKSSGV
Trigger: TACTCCAGAGGATTTGAGATCATTTCCTAGCATCCATGGTAGGTGGCTGACAGCTGCTTGTAATGTCAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp CTAGCTATGGTGGCACATGCTTTCAGTTCTAGCACTTaGCAGAGGCAGTCATATCTGAGTTTGAGGATAGAC +
Preference number: 3 (lower is better)
Translates to: LAMVAHAFSSST*QRQSYLSLRID
Trigger: GTCTATCCTCAAACTCAGATATGACTGCCTCTGCCAAGTGCTAGAACTGAAAGCATGTGCCACCATAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR TCA 72 bp AAATGTGCATTAACTTTCCTCCTCCCTCTCTGCCAATaGCCTTTTCCTCAGCAAAAGTGCTCCACAAGACAC +
Preference number: 3 (lower is better)
Translates to: KCALTFLLPLCQ*PFPQQKCSTRH
Trigger: GTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGGCAGAGAGGGAGGAGGAAAGTTAATGCACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp AAGAACTCCATCGTGGAGATTCCCTTGCTATCCTACTaGATTCTGGCTATGCGAATGTGTCTAGACGAGATG +
Preference number: 3 (lower is better)
Translates to: KNSIVEIPLLSY*ILAMRMCLDEM
Trigger: CATCTCGTCTAGACACATTCGCATAGCCAGAATTCAGTAGGATAGCAAGGGAATCTCCACGATGGAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp AGTCTCTTTTCACTTTCTTTTTGCAGAATTAGACATTaGACCCAGACCCGGGCAAGGCAGGCAACTGATCTG +
Preference number: 3 (lower is better)
Translates to: SLFSLSFCRIRH*TQTRARQATDL
Trigger: CAGATCAGTTGCCTGCCTTGCCCGGGTCTGGGTTCAATGTCTAATTCTGCAAAAAGAAAGTGAAAAGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR GCA 72 bp CTGGTATGTCCAGATGATGATCCCCCAGTTATAAACTaGTTGCTACCAGCTTGCTACCACAAACATGAAGCT +
Preference number: 3 (lower is better)
Translates to: LVCPDDDPPVIN*LLPACYHKHEA
Trigger: AGCTTCATGTTTGTGGTAGCAAGCTGGTAGCAAGCAGTTTATAACTGGGGGATCATCATCTGGACATACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp ACGCATCCATCTTTGTTGCTCCCTCACACAGCTTCCTaGGATGAAAGCACTTCACTTACTGACAATTCTTTC +
Preference number: 3 (lower is better)
Translates to: THPSLLLPHTAS*DESTSLTDNSF
Trigger: GAAAGAATTGTCAGTAAGTGAAGTGCTTTCATCCCAGGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 72 bp CTATTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTaGTGGTTCAGCTGTTCCTGGCCTCCCAGAAACATA +
Preference number: 3 (lower is better)
Translates to: LFWYSFPSPLSF*WFSCSWPPRNI
Trigger: TATGTTTCTGGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR-3UTR CAA 90 bp TCCACAGATTTCATAGATTCGGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAGAGAAATCTTCCTTTTaGCTGGGGAGAGAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: STDFIDSAVGGYRGKQNIEKSSF*LGREGG
Trigger: TCCTCCTTCTCTCCCCAGCAAAAAGGAAGATTTCTC...TATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR TCA 72 bp AAGCAAAACATAAGCAGAGTCCACCATGCCTTTTTGTaGGCTCAAGAGACTTCTTCCACAGAAGTTCCCATC +
Preference number: 3 (lower is better)
Translates to: KQNISRVHHAFL*AQETSSTEVPI
Trigger: GATGGGAACTTCTGTGGAAGAAGTCTCTTGAGCTCACAAAAAGGCATGGTGGACTCTGCTTATGTTTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp CTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATaGCTTTTTGTGAGCTCAAGAGACTTCTTCCACAGA +
Preference number: 3 (lower is better)
Translates to: LQRKAKHKQSPP*LFVSSRDFFHR
Trigger: TCTGTGGAAGAAGTCTCTTGAGCTCACAAAAAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR GCA 72 bp CTAATATTTGTCACGACTGAGCATGGTGAGCACATCTaGAATTCTAGCAGCTTGAGTTACCTGAGACCCTAT +
Preference number: 3 (lower is better)
Translates to: LIFVTTEHGEHI*NSSSLSYLRPY
Trigger: ATAGGGTCTCAGGTAACTCAAGCTGCTAGAATTGCAGATGTGCTCACCATGCTCAGTCGTGACAAATATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR CCA 72 bp TTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTGGTaGTTCAGCTGTTCCTGGCCTCCCAGAAACATAATT +
Preference number: 3 (lower is better)
Translates to: FWYSFPSPLSFW*FSCSWPPRNII
Trigger: AATTATGTTTCTGGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp TGTCTTTTCCACAGATTTCATAGATTCGGCAGTTGGTaGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: CLFHRFHRFGSW*LQRKAKHKQSP
Trigger: TGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CCA 72 bp AGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTaGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: SCLFHRFHRFGS*WLQRKAKHKQS
Trigger: ACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR-3UTR CAA 90 bp TATCAAGGTATAACTTATAAAGACAAAGCTATACCAGGGATCGGCCTGAGGAGAAGATGGGCCTTGAAATaGTGCTTTTTCTGCCTCAAC +
Preference number: 3 (lower is better)
Translates to: YQGITYKDKAIPGIGLRRRWALK*CFFCLN
Trigger: GTTGAGGCAGAAAAAGCACAATTTCAAGGCCCATCT...TCTCCTCAGGCCGATCCCTGGTATAGCTTTGTCTTTATAAGTTATACCTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 72 bp GCTTTCTTCACTGTGACAACAGAGTTAGTTTCTGTCTaGGAGGAGAGAGATCAGATGGTTCTTGCTTTATTC +
Preference number: 3 (lower is better)
Translates to: AFFTVTTELVSV*EERDQMVLALF
Trigger: GAATAAAGCAAGAACCATCTGATCTCTCTCCTCTCAGACAGAAACTAACTCTGTTGTCACAGTGAAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp AAGACAGGAAGTTTATCTTTATATTCTGTGATGGTTTaGGTGAGAAATGTCCCCACAGGCTCCTGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: KTGSLSLYSVMV*VRNVPTGSCFQ
Trigger: CTGAAAACAGGAGCCTGTGGGGACATTTCTCACCCAAACCATCACAGAATATAAAGATAAACTTCCTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR-3UTR CAA 90 bp ACAACAAATCTTGGGACAGTTTCTCCTCACTGTGCTAGACACAAGAACCACAAAACCACCCAAACCCCTTaGTATTTTCCTTTAGTTGAA +
Preference number: 3 (lower is better)
Translates to: TTNLGTVSPHCARHKNHKTTQTP*YFPLVE
Trigger: TTCAACTAAAGGAAAATACAAAGGGGTTTGGGTGGT...TTTGTGGTTCTTGTGTCTAGCACAGTGAGGAGAAACTGTCCCAAGATTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 72 bp TCTGCAGGCAAGAGCACACACAGCACTATGTTAACATaGAAGAGGGAACTTGATGACTTTATCAGTTATGTA +
Preference number: 3 (lower is better)
Translates to: SAGKSTHSTMLT*KRELDDFISYV
Trigger: TACATAACTGATAAAGTCATCAAGTTCCCTCTTTCATGTTAACATAGTGCTGTGTGTGCTCTTGCCTGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp ACCTCTCGGACTGTAGCTATGAAGTTTTCGTTGTCTTaGGGATTAGCTAAAATTATACTGTGCAATCTGTTC +
Preference number: 3 (lower is better)
Translates to: TSRTVAMKFSLS*GLAKIILCNLF
Trigger: GAACAGATTGCACAGTATAATTTTAGCTAATCCCCAAGACAACGAAAACTTCATAGCTACAGTCCGAGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR-3UTR CAA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGGCTATGAAGTTTTCGTaGTCTTGGGGATTAGCTAAA +
Preference number: 3 (lower is better)
Translates to: LVLISLRRLLAITEQGSEAMKFS*SWGLAK
Trigger: TTTAGCTAATCCCCAAGACAACGAAAACTTCATAGC...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR-3UTR CAA 90 bp TATCAAGGTATAACTTATAAAGACAAAGCTATACCAGGGATCGGCCTGAGGAGACATGAAAGAGGGAACTaGATGACTTTATCAGTTATG +
Preference number: 3 (lower is better)
Translates to: YQGITYKDKAIPGIGLRRHERGN*MTLSVM
Trigger: CATAACTGATAAAGTCATCAAGTTCCCTCTTTCATG...TCTCCTCAGGCCGATCCCTGGTATAGCTTTGTCTTTATAAGTTATACCTTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp AAATTATACTGTGCAATCTGTTCATGTATGAGTCAATaGTGTCCACTGTTGGTATTTCTCCACTTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: KLYCAICSCMSQ*CPLLVFLHFLK
Trigger: CTTCAGGAAGTGGAGAAATACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR TCA 72 bp AAATTGTGCTTTTTCTGCCTCAACCCTCTGATATTCTaGTCTTCTAAGCACTGTGACACAAGTAAGAATCAA +
Preference number: 3 (lower is better)
Translates to: KLCFFCLNPLIF*SSKHCDTSKNQ
Trigger: TTGATTCTTACTTGTGTCACAGTGCTTAGAAGATCAGAATATCAGAGGGTTGAGGCAGAAAAAGCACAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR TCA 72 bp TATAAACTGCTTGCTACCAGCTTGCTACCACAAACATaGAGCTTCAGATTGAAAATTAATCTCATCTCTTCG +
Preference number: 3 (lower is better)
Translates to: YKLLATSLLPQT*SFRLKINLISS
Trigger: CGAAGAGATGAGATTAATTTTCAATCTGAAGCTTCATGTTTGTGGTAGCAAGCTGGTAGCAAGCAGTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CCA 72 bp TCCAAAATTTTAATTACGAACGCTTGTACAGAAACCTaGCAATTCAACAGCTCCAAACACATGTACACAATA +
Preference number: 3 (lower is better)
Translates to: SKILITNACTET*QFNSSKHMYTI
Trigger: TATTGTGTACATGTGTTTGGAGCTGTTGAATTGCCAGGTTTCTGTACAAGCGTTCGTAATTAAAATTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACTACCAGGCAAGGGCATaGTGGCGAAGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDYQARA*WRSCWS
Trigger: TGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGTA...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACCAGGCAAGGGCATGCTaGCGAAGCTGCTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDQARAC*RSCWST
Trigger: TGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTG...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR TCA 90 bp GAGTCCCAGCAGGGTAGTGATGGAGAAGATTGGGCCCATCCAATGAGAATTCTCGTCTCCAGGTGCTGCTaGAGGACGGTGTTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: ESQQGSDGEDWAHPMRILVSRCC*RTVFRL
Trigger: GAGCCGAAACACCGTCCTTCAGCAGCACCTGGAGAC...GAGAATTCTCATTGGATGGGCCCAATCTTCTCCATCACTACCCTGCTGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp GAGTCCCAGCAGGGTAGTGATGGAGAAGATTGGGCCCATCCAATGAGAATTCTCTGCTGGCGAAGCTGCTaGTCAACATCTGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ESQQGSDGEDWAHPMRILCWRSC*STSAAG
Trigger: CCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCA...GAGAATTCTCATTGGATGGGCCCAATCTTCTCCATCACTACCCTGCTGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR TCA 90 bp GGCTCAGCATGCTCTGCTTTGGTTCCAAAGATCTCAGCTGCCACCTCTATCCTTTTGGAAGCCTCACTCTaGAGCAGCTGGCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSACSALVPKISAATSILLEASL*SSWPWE
Trigger: CTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAA...AAGGATAGAGGTGGCAGCTGAGATCTTTGGAACCAAAGCAGAGCATGCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp TGGTGCAGCCACAGCATGGGGGCTCTGGCTTATGGGCAGATTGTGAGGGACCATAACCTCTGGTCTCTTTaGTCGAAGCTGTTCTCTACG +
Preference number: 4 (lower is better)
Translates to: WCSHSMGALAYGQIVRDHNLWSL*SKLFST
Trigger: CGTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTT...ATGGTCCCTCACAATCTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp GAGTTCACGCATCCATCTTTGTTGCTCCCTCACACAGCTTCCTGGGATGAAAGCGCTTCTCCACTGCTGTaGGCATGCTCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: EFTHPSLLLPHTASWDESASPLL*ACSPRA
Trigger: AGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGC...GCTTTCATCCCAGGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGTGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp ATCAGGCTGGTGTGGAAACTCATAGAGATCCACCTGCCTCTGTATCCCAAGTGTCTGCTGGTCAACATCTaGCGCAGGGTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IRLVWKLIEIHLPLYPKCLLVNI*RRVSRC
Trigger: GCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAG...ACACTTGGGATACAGAGGCAGGTGGATCTCTATGAGTTTCCACACCAGCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp TCCCTCTCTGCCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCGCATGCTGGCGAAGCTaGTGGTCAACATCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SLSANDLFLSKSAPQDTAACWRS*WSTSAA
Trigger: TGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGC...GGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGGCAGAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp GGCTCAGCATGCTCTGCTTTGGTTCCAAAGATCTCAGCTGCCACCTCTATCCTTTTTCGGCTCCGCTCCTaGATCACGTCAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSACSALVPKISAATSILFRLRS*ITSTSS
Trigger: GCTGGAGGTTGACGTGATCCAGGAGCGGAGCCGAAA...AAGGATAGAGGTGGCAGCTGAGATCTTTGGAACCAAAGCAGAGCATGCTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp GGGGAGAGAAGGAGGATGTCAGTCTCGGGGTCGCTGTaGTCAGAAGAATGTATGCAGCTCCACTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GERRRMSVSGSL*SEECMQLHFSR
Trigger: TCTGCTGAAGTGGAGCTGCATACATTCTTCTGACAACAGCGACCCCGAGACTGACATCCTCCTTCTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp TGGTGCAGCCACAGCATGGGGGCTCTGGCTTATGGGCAGATTGTGAGGGACCATCCTCGTTTACTTCTTTaGTCATCTTCAGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: WCSHSMGALAYGQIVRDHPRLLL*SSSGLC
Trigger: GCAAAGGCCTGAAGATGAGCAAAGAAGTAAACGAGG...ATGGTCCCTCACAATCTGCCCATAAGCCAGAGCCCCCATGCTGTGGCTGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCACACAGGGCATTTCTACAGAGTTCACGCATCCATCTTTGTTCTGCTGGTCAACATCTaGCGCAGGGTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPELHTGHFYRVHASIFVLLVNI*RRVSRC
Trigger: GCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAG...AACAAAGATGGATGCGTGAACTCTGTAGAAATGCCCTGTGTGCAGCTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACCCACAAACTCTGGGTTaGTTGTTGATGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDPQTLG*LLMWLH
Trigger: GTGCAGCCACATCAACAACCAACCCAGAGTTTGTGG...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp CCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCAACAGATGGGCAGGCAAGGGCATGCTaGCGAAGCTGCTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: PMTFSSAKVLHKTLPTDGQARAC*RSCWST
Trigger: TGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTG...CCCATCTGTTGGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp CATCTGGTTGAAGACAGACAAACTCCCAGAACCGGCTaGGGTGTCCTTCTGCCACAGACAGTGAGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: HLVEDRQTPRTG*GVLLPQTVSSS
Trigger: GCTAGAACTCACTGTCTGTGGCAGAAGGACACCCAAGCCGGTTCTGGGAGTTTGTCTGTCTTCAACCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp ATGTCTATGGAGGTGCCTACACAGGCCAGAAGAGGCTaGACATTACAAGCAGCTGTCAGCCACCTACCATGG +
Preference number: 4 (lower is better)
Translates to: MSMEVPTQARRG*TLQAAVSHLPW
Trigger: CCATGGTAGGTGGCTGACAGCTGCTTGTAATGTCAAGCCTCTTCTGGCCTGTGTAGGCACCTCCATAGACAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR GCA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACAACCTCTGGTCTCTTTaGTCGAAGCTGTTCTCTACG +
Preference number: 4 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDNLWSL*SKLFST
Trigger: CGTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTT...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACCTTGCCTATGAGATTTaGCTTTCTGACGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDLAYEI*LSDGPV
Trigger: CACAGGACCGTCAGAAAGGCAAATCTCATAGGCAAG...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp TCTGCCCCGTCTCAGTTCAAATGTTCATGGGAAGCTTCTCATTCTGCACAAGTGCGCATGCTCTCCACGTaGTTCTGTAGGGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: SAPSQFKCSWEASHSAQVRMLST*FCRAAF
Trigger: GAACGCAGCCCTACAGAAGCACGTGGAGAGCATGCG...CACTTGTGCAGAATGAGAAGCTTCCCATGAACATTTGAACTGAGACGGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR TCA 90 bp CAGAGGATCCCTATTCTTAGGAAATACAAAAGTCTTCTGGGGGTAAAGGGCCAGTTGGAAGCCTCACTCTaGAGCAGCTGGCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QRIPILRKYKSLLGVKGQLEASL*SSWPWE
Trigger: CTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAA...CTGGCCCTTTACCCCCAGAAGACTTTTGTATTTCCTAAGAATAGGGATCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR TCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTTTGGAAGCCTCACTCTaGAGCAGCTGGCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVLEASL*SSWPWE
Trigger: CTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAA...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR TCA 90 bp GGACCCTATGGGAGGGAGAAGGAGTCATTAAGTGATCTGGCACTTGTGACTTTGAGCCGCAGTGGACAGTaGCAGGAGATGTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: GPYGREKESLSDLALVTLSRSGQ*QEMFTY
Trigger: GTAAGTGAACATCTCCTGTCACTGTCCACTGCGGCT...CAAAGTCACAAGTGCCAGATCACTTAATGACTCCTTCTCCCTCCCATAGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR GCA 90 bp GACTTTGAAGAGAGTGAGGGGCTGGACACTTCCAGAGCTGCACACAGGGCATTTCTGCCTCACGAGCTTTaGTGTGGTTCAGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: DFEESEGLDTSRAAHRAFLPHEL*CGSGIL
Trigger: AAGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAG...AAATGCCCTGTGTGCAGCTCTGGAAGTGTCCAGCCCCTCACTCTCTTCAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp TCTGCCCCGTCTCAGTTCAAATGTTCATGGGAAGCTTCTCATTCTGCACAAGTGCCACTGCTGTGCGCATaGTCTCCACGTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SAPSQFKCSWEASHSAQVPLLCA*SPRASV
Trigger: TACAGAAGCACGTGGAGAGCATGCGCACAGCAGTGG...CACTTGTGCAGAATGAGAAGCTTCCCATGAACATTTGAACTGAGACGGGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp GAGACATGGTCTTACTATGTAGCCCTGGGTATCCTTGAACTAGATCAGGCTGGTCCACTGCTGTGCGCATaGTCTCCACGTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: ETWSYYVALGILELDQAGPLLCA*SPRASV
Trigger: TACAGAAGCACGTGGAGAGCATGCGCACAGCAGTGG...ACCAGCCTGATCTAGTTCAAGGATACCCAGGGCTACATAGTAAGACCATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTGCTTCTCCACTGCTGTaGGCATGCTCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVASPLL*ACSPRA
Trigger: AGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGC...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp GGCTCAGCATGCTCTGCTTTGGTTCCAAAGATCTCAGCTGCCACCTCTATCCTTTCTCATGATCATGAGTaGCCTGTCGGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: GSACSALVPKISAATSILSHDHE*PVGLHL
Trigger: AAGATGCAGCCCGACAGGCCACTCATGATCATGAGA...AAGGATAGAGGTGGCAGCTGAGATCTTTGGAACCAAAGCAGAGCATGCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp GCTGTGGCTGGGATTCCATGTCTGAGCAGGAGTAATGCTCAGAGATCAGCAGGCTCACGAGCTTTGCTGTaGTTCAGGAATTCTTCGGTA +
Preference number: 4 (lower is better)
Translates to: AVAGIPCLSRSNAQRSAGSRALL*FRNSSV
Trigger: TACCGAAGAATTCCTGAACCACAGCAAAGCTCGTGA...GCCTGCTGATCTCTGAGCATTACTCCTGCTCAGACATGGAATCCCAGCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACTCACGAGCTTTGCTGTaGTTCAGGAATTCTTCGGTA +
Preference number: 4 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDSRALL*FRNSSV
Trigger: TACCGAAGAATTCCTGAACCACAGCAAAGCTCGTGA...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp CATCCAATGAGAATTCTCCTTCAAAGTCCCGCTGAGCCACAAAACCCAGAGGTCTTGGATTTACGAAGCTaGCGGAGCTCTGCCTCACGA +
Preference number: 4 (lower is better)
Translates to: HPMRILLQSPAEPQNPEVLDLRS*RSSASR
Trigger: TCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAA...GACCTCTGGGTTTTGTGGCTCAGCGGGACTTTGAAGGAGAATTCTCATTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTTTTCGGCTCCGCTCCTaGATCACGTCAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVFRLRS*ITSTSS
Trigger: GCTGGAGGTTGACGTGATCCAGGAGCGGAGCCGAAA...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
3UTR CAA 72 bp GGAATGTGTAACACTGAGTTGGTAACTGCTTCCTTCTaGAGGAGAGCTTGCAGGCGCAGGATCAGCGATGGA +
Preference number: 4 (lower is better)
Translates to: GMCNTELVTASF*RRACRRRISDG
Trigger: TCCATCGCTGATCCTGCGCCTGCAAGCTCTCCTCAAGAAGGAAGCAGTTACCAACTCAGTGTTACACATTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp AGGACTTCCCCTGCCCATACTGAGTTTCTGTATGATTaGGGGAAAGATGGACCCTATGGGAGGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RTSPAHTEFLYD*GKDGPYGREKE
Trigger: CTCCTTCTCCCTCCCATAGGGTCCATCTTTCCCCAAATCATACAGAAACTCAGTATGGGCAGGGGAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR TCA 90 bp ACACAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCAATTGGAAGCCTCACTCTaGAGCAGCTGGCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TQSNPVSKTKRNQTKPNQLEASL*SSWPWE
Trigger: CTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAA...TTGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR TCA 90 bp CTTCCAGAGCTGCACACAGGGCATTTCTACAGAGTTCACGCATCCATCTTTGTTCCTGTGTTTTCCTACTaGAGACCTTGTAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPELHTGHFYRVHASIFVPVFSY*RPCRPR
Trigger: CCGAGGCCTACAAGGTCTTCAGTAGGAAAACACAGG...AACAAAGATGGATGCGTGAACTCTGTAGAAATGCCCTGTGTGCAGCTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp CCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCAACAGATGGGCCACAAACTCTGGGTTaGTTGTTGATGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PMTFSSAKVLHKTLPTDGPQTLG*LLMWLH
Trigger: GTGCAGCCACATCAACAACCAACCCAGAGTTTGTGG...CCCATCTGTTGGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp GAGTTCACGCATCCATCTTTGTTGCTCCCTCACACAGCTTCCTGGGATGAAAGCTGGAAATGGAACCTCTaGTCTCTTTGCTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EFTHPSLLLPHTASWDESWKWNL*SLCSKL
Trigger: CAGCTTCGAGCAAAGAGACCAGAGGTTCCATTTCCA...GCTTTCATCCCAGGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGTGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp CAGGGCATTTCTACAGAGTTCACGCATCCATCTTTGTaGCTCCCTCACACAGCTTCCTGGGATGAAAGCACT +
Preference number: 4 (lower is better)
Translates to: QGISTEFTHPSL*LPHTASWDEST
Trigger: AGTGCTTTCATCCCAGGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGTGAACTCTGTAGAAATGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR TCA 90 bp CACAGACAGTTTAATTGCCTAGGAGACAATTTTAGCCTCGAAGACAGGAAGTTTGTCTCCAGGTGCTGCTaGAGGACGGTGTTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: HRQFNCLGDNFSLEDRKFVSRCC*RTVFRL
Trigger: GAGCCGAAACACCGTCCTTCAGCAGCACCTGGAGAC...AAACTTCCTGTCTTCGAGGCTAAAATTGTCTCCTAGGCAATTAAACTGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp GAGTTCACGCATCCATCTTTGTTGCTCCCTCACACAGCTTCCTGGGATGAAAGCTCATCTTCAGGCCTTTaGTCATTGCCTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: EFTHPSLLLPHTASWDESSSSGL*SLPSTA
Trigger: TGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGA...GCTTTCATCCCAGGAAGCTGTGTGAGGGAGCAACAAAGATGGATGCGTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTCTTGCCTATGAGATTTaGCTTTCTGACGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLLAYEI*LSDGPV
Trigger: CACAGGACCGTCAGAAAGGCAAATCTCATAGGCAAG...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp TCCACAGATTTCATAGATTCGGCAGTTGGTGGCTACAGAGGAAAGCAAAACATATTCCAGGCAAGGGCATaGTGGCGAAGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: STDFIDSAVGGYRGKQNIFQARA*WRSCWS
Trigger: TGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAA...TATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR TCA 90 bp CACAGACAGTTTAATTGCCTAGGAGACAATTTTAGCCTCGAAGACAGGAAGTTTTTGGAAGCCTCACTCTaGAGCAGCTGGCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HRQFNCLGDNFSLEDRKFLEASL*SSWPWE
Trigger: CTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAA...AAACTTCCTGTCTTCGAGGCTAAAATTGTCTCCTAGGCAATTAAACTGTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp GAAGCTACTGCTGTGACAAGAACTCCATCGTGGAGATTCCCTTGCTATCCTACTCAGGCCTTTGCTCATTaGCTTCTACAGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: EATAVTRTPSWRFPCYPTQAFAH*LLQHWK
Trigger: CTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTG...AGTAGGATAGCAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCAGTAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp GAAGCTACTGCTGTGACAAGAACTCCATCGTGGAGATTCCCTTGCTATCCTACTCTCCTTATCTCTGTCTaGTTCATCAAGGTAGCGCTG +
Preference number: 4 (lower is better)
Translates to: EATAVTRTPSWRFPCYPTLLISV*FIKVAL
Trigger: CAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAG...AGTAGGATAGCAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCAGTAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp CCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCAACAGATGGGGATCATTGCTCTCCTTaGAGCCATCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: PMTFSSAKVLHKTLPTDGDHCSP*SHLHLQ
Trigger: TTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATC...CCCATCTGTTGGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp TTTGTCACGACTGAGCATGGTGAGCACATCTGCAATTCTAGCAGCTTGAGTTACCCACAAACTCTGGGTTaGTTGTTGATGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FVTTEHGEHICNSSSLSYPQTLG*LLMWLH
Trigger: GTGCAGCCACATCAACAACCAACCCAGAGTTTGTGG...GTAACTCAAGCTGCTAGAATTGCAGATGTGCTCACCATGCTCAGTCGTGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CCA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTAATGGTGTCCACTGTTaGTATTTCTCCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLNGVHC*YFSTSR
Trigger: CCTGGAAGTGGAGAAATACCAACAGTGGACACCATT...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp CAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCAAACCCTTTGGAAGCCGCAGTaGACAGTGACAGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: QSNPVSKTKRNQTKPNQTLWKPQ*TVTGDV
Trigger: AACATCTCCTGTCACTGTCCACTGCGGCTTCCAAAG...GGTTTGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CCA 90 bp CTAGATCAGGCTGGTGTGGAAACTCATAGAGATCCACCTGCCTCTGTATCCCAATGGGACATGCTGGTCTaGAACTCACAGATATCTTTC +
Preference number: 4 (lower is better)
Translates to: LDQAGVETHRDPPASVSQWDMLV*NSQISF
Trigger: GAAAGATATCTGTGAGTTCCAGACCAGCATGTCCCA...TTGGGATACAGAGGCAGGTGGATCTCTATGAGTTTCCACACCAGCCTGATCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR TCA 90 bp GTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAGTCTCCAGGTGCTGCTaGAGGACGGTGTTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: VLISLRRLLAITEQGSESVSRCC*RTVFRL
Trigger: GAGCCGAAACACCGTCCTTCAGCAGCACCTGGAGAC...TGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp TTTGTCACGACTGAGCATGGTGAGCACATCTGCAATTCTAGCAGCTTGAGTTACCAGGCCTTTGCTCATTaGCTTCTACAGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: FVTTEHGEHICNSSSLSYQAFAH*LLQHWK
Trigger: CTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTG...GTAACTCAAGCTGCTAGAATTGCAGATGTGCTCACCATGCTCAGTCGTGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR GCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTCAGGCCTTTGCTCATTaGCTTCTACAGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVQAFAH*LLQHWK
Trigger: CTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTG...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTAACCTCTGGTCTCTTTaGTCGAAGCTGTTCTCTACG +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVNLWSL*SKLFST
Trigger: CGTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTT...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTCTCCTTATCTCTGTCTaGTTCATCAAGGTAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVLLISV*FIKVAL
Trigger: CAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAG...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGCGCATGCTCTCCACGTaGTTCTGTAGGGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSERMLST*FCRAAF
Trigger: GAACGCAGCCCTACAGAAGCACGTGGAGAGCATGCG...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp ATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTTGGTATTTCTCGCATGCTCTCCACGTaGTTCTGTAGGGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: ILCNLFMYESMVSTVGISRMLST*FCRAAF
Trigger: GAACGCAGCCCTACAGAAGCACGTGGAGAGCATGCG...AGAAATACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGGCATGCTGGCGAAGCTaGTGGTCAACATCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSEACWRS*WSTSAA
Trigger: TGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGC...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTTGGAAATGGAACCTCTaGTCTCTTTGCTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVWKWNL*SLCSKL
Trigger: CAGCTTCGAGCAAAGAGACCAGAGGTTCCATTTCCA...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp TTTAGCCTCGAAGACAGGAAGTTTATCTTTATATTCTGTGATGGTTTGGGTGAGTTTCGGCTCCGCTCCTaGATCACGTCAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FSLEDRKFIFIFCDGLGEFRLRS*ITSTSS
Trigger: GCTGGAGGTTGACGTGATCCAGGAGCGGAGCCGAAA...CTCACCCAAACCATCACAGAATATAAAGATAAACTTCCTGTCTTCGAGGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp AAGTCTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGCTGGCGAAGCTGCTaGTCAACATCTGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSGFNIIEKTSSNYRAGICWRSC*STSAAG
Trigger: CCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCA...GATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp AAAATTATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTTGGTTGCTGGCGAAGCTGCTaGTCAACATCTGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KIILCNLFMYESMVSTVGCWRSC*STSAAG
Trigger: CCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCA...ACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGCAGGCAAGGGCATGCTaGCGAAGCTGCTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSEQARAC*RSCWST
Trigger: TGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTG...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
3UTR CAA 72 bp ATGTGCTCACATAGCTCGTTACTACTGCTGCTCCCTTaGGACTATCTAATAGAGCACACAGGAGAGAACGCA +
Preference number: 4 (lower is better)
Translates to: MCSHSSLLLLLP*DYLIEHTGENA
Trigger: TGCGTTCTCTCCTGTGTGCTCTATTAGATAGTCCAAAGGGAGCAGCAGTAGTAACGAGCTATGTGAGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp AAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATaGAGTTTCTGGTGGTTCAGCTGTTCCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KILLFWYSFPSP*SFWWFSCSWPP
Trigger: GGGAGGCCAGGAACAGCTGAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR TCA 90 bp GGAGAGAAGGAAGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTGGTGGCCAATCTGTTCATGTATaGGTCAATGGTGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: GEKEAVFSTDFIDSAVGGQSVHV*VNGVHC
Trigger: ACAGTGGACACCATTGACTCATACATGAACAGATTG...GCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCTTCCTTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR GCA 90 bp TGTGACAACAGAGTTAGTTTCTGTCTGAGAGGAGAGAGATCAGATGGTTCTTGCAACCTCTGGTCTCTTTaGTCGAAGCTGTTCTCTACG +
Preference number: 4 (lower is better)
Translates to: CDNRVSFCLRGERSDGSCNLWSL*SKLFST
Trigger: CGTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTT...GCAAGAACCATCTGATCTCTCTCCTCTCAGACAGAAACTAACTCTGTTGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR GCA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCCTGCTGGTCAACATCTaGCGCAGGGTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KLELSSDNKNQVASIKQALLVNI*RRVSRC
Trigger: GCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAG...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AAAATTATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTTGGTGCATGCTGGCGAAGCTaGTGGTCAACATCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: KIILCNLFMYESMVSTVGACWRS*WSTSAA
Trigger: TGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGC...ACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp ATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTTGGTATTTCTCCCCTGCCTCCTGAGTaGTGGGATTTAAGACATGCC +
Preference number: 4 (lower is better)
Translates to: ILCNLFMYESMVSTVGISPLPPE*WDLRHA
Trigger: GGCATGTCTTAAATCCCAGCACTCAGGAGGCAGGGG...AGAAATACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp GCTCTTCTTAGGCTTTGTCACTTGACCACCCACATGGTTCTGAGTATCAAATTATCTCATGATCATGAGTaGCCTGTCGGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ALLRLCHLTTHMVLSIKLSHDHE*PVGLHL
Trigger: AAGATGCAGCCCGACAGGCCACTCATGATCATGAGA...TAATTTGATACTCAGAACCATGTGGGTGGTCAAGTGACAAAGCCTAAGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp GTGGAATGTGATCAGTCATTTGTAATGAAGTCATCTATAACTGAAGGCCCAAGAGCATGCCCATTGCTTTaGAAGCCGCAGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VECDQSFVMKSSITEGPRACPLL*KPQWTV
Trigger: CACTGTCCACTGCGGCTTCCAAAGCAATGGGCATGC...TCTTGGGCCTTCAGTTATAGATGACTTCATTACAAATGACTGATCACATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
3UTR CAA 72 bp AGGCTAGAAGGAAGGGCTCTTCTTAGGCTTTGTCACTaGACCACCCACATGGTTCTGAGTATCAAATTAGGT +
Preference number: 4 (lower is better)
Translates to: RLEGRALLRLCH*TTHMVLSIKLG
Trigger: ACCTAATTTGATACTCAGAACCATGTGGGTGGTCAAGTGACAAAGCCTAAGAAGAGCCCTTCCTTCTAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
3UTR CAA 72 bp ATCCTTTCGGCTCATAACCCCTTAGGACAACAAATCTaGGGACAGTTTCTCCTCACTGTGCTAGACACAAGA +
Preference number: 4 (lower is better)
Translates to: ILSAHNPLGQQI*GQFLLTVLDTR
Trigger: TCTTGTGTCTAGCACAGTGAGGAGAAACTGTCCCAAGATTTGTTGTCCTAAGGGGTTATGAGCCGAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR TCA 90 bp TTTAGCCTCGAAGACAGGAAGTTTATCTTTATATTCTGTGATGGTTTGGGTGAGCCTGTGTTTTCCTACTaGAGACCTTGTAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FSLEDRKFIFIFCDGLGEPVFSY*RPCRPR
Trigger: CCGAGGCCTACAAGGTCTTCAGTAGGAAAACACAGG...CTCACCCAAACCATCACAGAATATAAAGATAAACTTCCTGTCTTCGAGGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR TCA 90 bp AGAGGCTTGACATTACAAGCAGCTGTCAGCCACCTACCATGGATGCTAGGAAATCCCCCAAACAATTTCTaGGATATAATCAAAACCGAG +
Preference number: 4 (lower is better)
Translates to: RGLTLQAAVSHLPWMLGNPPNNF*DIIKTE
Trigger: CTCGGTTTTGATTATATCTCAGAAATTGTTTGGGGG...ATTTCCTAGCATCCATGGTAGGTGGCTGACAGCTGCTTGTAATGTCAAGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR GCA 90 bp GATATGGCTCTAGATATGGCAAGAGATACGTATGAGAAAGCTGGGCAAGTCTCATCATCTTCAGGCCTTTaGTCATTGCCTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: DMALDMARDTYEKAGQVSSSSGL*SLPSTA
Trigger: TGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGA...TGAGACTTGCCCAGCTTTCTCATACGTATCTCTTGCCATATCTAGAGCCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR GCA 90 bp GCTCTTCTTAGGCTTTGTCACTTGACCACCCACATGGTTCTGAGTATCAAATTACTGCCTCACGAGCTTTaGTGTGGTTCAGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: ALLRLCHLTTHMVLSIKLLPHEL*CGSGIL
Trigger: AAGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAG...TAATTTGATACTCAGAACCATGTGGGTGGTCAAGTGACAAAGCCTAAGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCTTCCAGGCAAGGGCATaGTGGCGAAGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KLELSSDNKNQVASIKQAFQARA*WRSCWS
Trigger: TGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAA...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215269.2
CDS-3UTR GCA 90 bp AGACACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGCAGGAACCATCACCTaGTTTTCCTCAGGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RHKNHKDSAILVFFSFPIAGTIT*FSSGGS
Trigger: ACTGCCTCCTGAGGAAAAGCAGGTGATGGTTCCTGC...AATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CCA 90 bp ACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTGGCCACAAACTCTGGGTTaGTTGTTGATGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TTKILLFWYSFPSPLSFWPQTLG*LLMWLH
Trigger: GTGCAGCCACATCAACAACCAACCCAGAGTTTGTGG...CCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CCA 90 bp GCTCTTCTTAGGCTTTGTCACTTGACCACCCACATGGTTCTGAGTATCAAATTATGGAAATGGAACCTCTaGTCTCTTTGCTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ALLRLCHLTTHMVLSIKLWKWNL*SLCSKL
Trigger: CAGCTTCGAGCAAAGAGACCAGAGGTTCCATTTCCA...TAATTTGATACTCAGAACCATGTGGGTGGTCAAGTGACAAAGCCTAAGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTTGGATTTACGAAGCTaGCGGAGCTCTGCCTCACGA +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSELDLRS*RSSASR
Trigger: TCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAA...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR TCA 90 bp AAGTCTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCCCTGTGTTTTCCTACTaGAGACCTTGTAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KSGFNIIEKTSSNYRAGIPVFSY*RPCRPR
Trigger: CCGAGGCCTACAAGGTCTTCAGTAGGAAAACACAGG...GATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTGGTGGTTCCAGGCCTTTGCTCATTaGCTTCTACAGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: KILLFWYSFPSPLSFWWFQAFAH*LLQHWK
Trigger: CTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTG...GAACCACCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR GCA 90 bp CACAGACAGTTTAATTGCCTAGGAGACAATTTTAGCCTCGAAGACAGGAAGTTTCAGGCCTTTGCTCATTaGCTTCTACAGCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: HRQFNCLGDNFSLEDRKFQAFAH*LLQHWK
Trigger: CTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTG...AAACTTCCTGTCTTCGAGGCTAAAATTGTCTCCTAGGCAATTAAACTGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp GCTCTTCTTAGGCTTTGTCACTTGACCACCCACATGGTTCTGAGTATCAAATTATCATCTTCAGGCCTTTaGTCATTGCCTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: ALLRLCHLTTHMVLSIKLSSSGL*SLPSTA
Trigger: TGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGA...TAATTTGATACTCAGAACCATGTGGGTGGTCAAGTGACAAAGCCTAAGAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCCCACTGCTGTGCGCATaGTCTCCACGTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KLELSSDNKNQVASIKQAPLLCA*SPRASV
Trigger: TACAGAAGCACGTGGAGAGCATGCGCACAGCAGTGG...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCACAGATATCTTTCTaGCCCTGCCTCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSESQISF*PCLLSA
Trigger: AGCACTCAGGAGGCAGGGGCAGAAAGATATCTGTGA...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp TCCACAGATTTCATAGATTCGGCAGTTGGTGGCTACAGAGGAAAGCAAAACATATCCTTTTTCTCCCTTTaGACCAACCTCCTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: STDFIDSAVGGYRGKQNISFFSL*TNLLVY
Trigger: GTAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGA...TATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CCA 90 bp CCTCACTGTGCTAGACACAAGAACCACAAAGATTCTGCTATTCTGGTATTCTTTTGGAAATGGAACCTCTaGTCTCTTTGCTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PHCARHKNHKDSAILVFFWKWNL*SLCSKL
Trigger: CAGCTTCGAGCAAAGAGACCAGAGGTTCCATTTCCA...AAAGAATACCAGAATAGCAGAATCTTTGTGGTTCTTGTGTCTAGCACAGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CCA 90 bp TCCACAGATTTCATAGATTCGGCAGTTGGTGGCTACAGAGGAAAGCAAAACATACTTCAAACTCCATGTTaGATTTACGAAGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: STDFIDSAVGGYRGKQNILQTPC*IYEAGG
Trigger: TCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAG...TATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp GCAACTGATCTGCTATGTGCTACCACCCAAACCCCTTaGTATTTTCCTTTAGTTGAAGGCTCTAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: ATDLLCATTQTP*YFPLVEGSKML
Trigger: AAGCATCTTAGAGCCTTCAACTAAAGGAAAATACAAAGGGGTTTGGGTGGTAGCACATAGCAGATCAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
3UTR CAA 72 bp ACTGAGCATGGTGAGCACATCTGCAATTCTAGCAGCTaGAGTTACCTGAGACCCTATATCAAAACAGCAATA +
Preference number: 4 (lower is better)
Translates to: TEHGEHICNSSS*SYLRPYIKTAI
Trigger: TATTGCTGTTTTGATATAGGGTCTCAGGTAACTCAAGCTGCTAGAATTGCAGATGTGCTCACCATGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR GCA 90 bp TCCCCTCCAATCTCTCTAACAAAAGCTTTCTTCACTGTGACAACAGAGTTAGTTCCTCGTTTACTTCTTTaGTCATCTTCAGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SPPISLTKAFFTVTTELVPRLLL*SSSGLC
Trigger: GCAAAGGCCTGAAGATGAGCAAAGAAGTAAACGAGG...AACTAACTCTGTTGTCACAGTGAAGAAAGCTTTTGTTAGAGAGATTGGAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR GCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGCTTGCCTATGAGATTTaGCTTTCTGACGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSELAYEI*LSDGPV
Trigger: CACAGGACCGTCAGAAAGGCAAATCTCATAGGCAAG...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp CTATGTATTAACTGTAGTACTGTACTCCTCCAAATATATGTGAATGGTGACAGATCCTTGCATGCCCATTaGTTTGGAAGCCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LCINCSTVLLQIYVNGDRSLHAH*FGSRSG
Trigger: TCCACTGCGGCTTCCAAAGCAATGGGCATGCAAGGA...TCTGTCACCATTCACATATATTTGGAGGAGTACAGTACTACAGTTAATACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CCA 90 bp ACCACAAAGATTCTGCTATTCTGGTATTCTTTTCCTTCCCCATTGAGTTTCTGGTCCTTTTTCTCCCTTTaGACCAACCTCCTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: TTKILLFWYSFPSPLSFWSFFSL*TNLLVY
Trigger: GTAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGA...CCAGAAACTCAATGGGGAAGGAAAAGAATACCAGAATAGCAGAATCTTTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CCA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCTTGGATTTACGAAGCTaGCGGAGCTCTGCCTCACGA +
Preference number: 4 (lower is better)
Translates to: KLELSSDNKNQVASIKQALDLRS*RSSASR
Trigger: TCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAA...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTTCATGTATGAGTCAATaGTGTCCACTGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: RRLLAITEQGSESNLPSVSCMSQ*CPLLVF
Trigger: AAATACCAACAGTGGACACCATTGACTCATACATGA...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215269.2
3UTR CAA 72 bp CCGAGAACCAACCCTGAGGAGAGAAACAGAACCTGTTaGTTTTTGTGGTTAAACAACAACAACAACAACAAC +
Preference number: 4 (lower is better)
Translates to: PRTNPEERNRTC*FLWLNNNNNNN
Trigger: GTTGTTGTTGTTGTTGTTGTTTAACCACAAAAACAAACAGGTTCTGTTTCTCTCCTCAGGGTTGGTTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
3UTR CAA 72 bp GAAGACAGGAAGTTTATCTTTATATTCTGTGATGGTTaGGGTGAGAAATGTCCCCACAGGCTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: EDRKFIFIFCDG*GEKCPHRLLFS
Trigger: TGAAAACAGGAGCCTGTGGGGACATTTCTCACCCAAACCATCACAGAATATAAAGATAAACTTCCTGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp GAGGAGAGAGATCAGATGGTTCTTGCTTTATTCCCTATAGTGGTAAAATTTGCTTCATCTTCAGGCCTTTaGTCATTGCCTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: EERDQMVLALFPIVVKFASSSGL*SLPSTA
Trigger: TGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGA...AGCAAATTTTACCACTATAGGGAATAAAGCAAGAACCATCTGATCTCTCTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR GCA 90 bp AAAATTATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTTGGTCTCCTTATCTCTGTCTaGTTCATCAAGGTAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KIILCNLFMYESMVSTVGLLISV*FIKVAL
Trigger: CAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAG...ACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp ACATGTCTAAGAAACCACCTCAAGTCTGGTTTTAATATCATTGAGAAGACTTCTATATCTTTCTGCCCCTaGCTCCTGAGTGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: TCLRNHLKSGFNIIEKTSISFCP*LLSAGI
Trigger: AATCCCAGCACTCAGGAGGCAGGGGCAGAAAGATAT...AGAAGTCTTCTCAATGATATTAAAACCAGACTTGAGGTGGTTTCTTAGACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp GAGGAGAGAGATCAGATGGTTCTTGCTTTATTCCCTATAGTGGTAAAATTTGCTGATCATTGCTCTCCTTaGAGCCATCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: EERDQMVLALFPIVVKFADHCSP*SHLHLQ
Trigger: TTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATC...AGCAAATTTTACCACTATAGGGAATAAAGCAAGAACCATCTGATCTCTCTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CCA 90 bp ACATGTCTAAGAAACCACCTCAAGTCTGGTTTTAATATCATTGAGAAGACTTCTCCACAAACTCTGGGTTaGTTGTTGATGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TCLRNHLKSGFNIIEKTSPQTLG*LLMWLH
Trigger: GTGCAGCCACATCAACAACCAACCCAGAGTTTGTGG...AGAAGTCTTCTCAATGATATTAAAACCAGACTTGAGGTGGTTTCTTAGACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCTCTCATGATCATGAGTaGCCTGTCGGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: KLELSSDNKNQVASIKQASHDHE*PVGLHL
Trigger: AAGATGCAGCCCGACAGGCCACTCATGATCATGAGA...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCACGAGCTTTGCTGTaGTTCAGGAATTCTTCGGTA +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSESRALL*FRNSSV
Trigger: TACCGAAGAATTCCTGAACCACAGCAAAGCTCGTGA...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGCTTCAAACTCCATGTTaGATTTACGAAGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LVLISLRRLLAITEQGSELQTPC*IYEAGG
Trigger: TCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAG...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp AATTTTAGCCTCGAAGACAGGAAGTTTATCTTTATATTCTGTGATGGTTTGGGTCTTCTCTTTTCCTCTTaGGAGACACTGCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NFSLEDRKFIFIFCDGLGLLFSS*ETLRLL
Trigger: GAGAAGCCGCAGTGTCTCCCAAGAGGAAAAGAGAAG...ACCCAAACCATCACAGAATATAAAGATAAACTTCCTGTCTTCGAGGCTAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AAGTCTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCCCTCGTTTACTTCTTTaGTCATCTTCAGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KSGFNIIEKTSSNYRAGIPRLLL*SSSGLC
Trigger: GCAAAGGCCTGAAGATGAGCAAAGAAGTAAACGAGG...GATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCCTGCCTCACGAGCTTTaGTGTGGTTCAGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: KLELSSDNKNQVASIKQALPHEL*CGSGIL
Trigger: AAGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAG...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp TCTAGCAGCTTGAGTTACCTGAGACCCTATATCAAAACAGCAATAACAACAATAGATCATTGCTCTCCTTaGAGCCATCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSSLSYLRPYIKTAITTIDHCSP*SHLHLQ
Trigger: TTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATC...TATTGTTGTTATTGCTGTTTTGATATAGGGTCTCAGGTAACTCAAGCTGCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CCA 90 bp GTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAGATCATTGCTCTCCTTaGAGCCATCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: VLISLRRLLAITEQGSESDHCSP*SHLHLQ
Trigger: TTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATC...TGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp AAAATTATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTTGGTTCCTTTTTCTCCCTTTaGACCAACCTCCTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: KIILCNLFMYESMVSTVGSFFSL*TNLLVY
Trigger: GTAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGA...ACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp GTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAATGGTGTCCACTGTTaGTATTTCTCCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLISLRRLLAITEQGSESNGVHC*YFSTSR
Trigger: CCTGGAAGTGGAGAAATACCAACAGTGGACACCATT...TGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215269.2
CDS-3UTR CCA 90 bp AGTTCAAATGTTCATGGGAAGCTTCTCATTCTGCACAAGTGCACACACTACATCTCATGTATGAGTCAATaGTGTCCACTGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: SSNVHGKLLILHKCTHYISCMSQ*CPLLVF
Trigger: AAATACCAACAGTGGACACCATTGACTCATACATGA...GATGTAGTGTGTGCACTTGTGCAGAATGAGAAGCTTCCCATGAACATTTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR TCA 90 bp AAGTCTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCCAATCTGTTCATGTATaGGTCAATGGTGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: KSGFNIIEKTSSNYRAGIQSVHV*VNGVHC
Trigger: ACAGTGGACACCATTGACTCATACATGAACAGATTG...GATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215269.2
CDS-3UTR GCA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCTCATCTTCAGGCCTTTaGTCATTGCCTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: KLELSSDNKNQVASIKQASSSGL*SLPSTA
Trigger: TGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGA...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR GCA 90 bp TTAGCTAAAATTATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTCCTCGTTTACTTCTTTaGTCATCTTCAGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LAKIILCNLFMYESMVSTPRLLL*SSSGLC
Trigger: GCAAAGGCCTGAAGATGAGCAAAGAAGTAAACGAGG...AGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTTTAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp TTAGCTAAAATTATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGATCATTGCTCTCCTTaGAGCCATCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LAKIILCNLFMYESMVSTDHCSP*SHLHLQ
Trigger: TTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATC...AGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTTTAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CCA 90 bp ACATGTCTAAGAAACCACCTCAAGTCTGGTTTTAATATCATTGAGAAGACTTCTTCCTTTTTCTCCCTTTaGACCAACCTCCTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: TCLRNHLKSGFNIIEKTSSFFSL*TNLLVY
Trigger: GTAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGA...AGAAGTCTTCTCAATGATATTAAAACCAGACTTGAGGTGGTTTCTTAGACATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
3UTR CAA 72 bp TGGTCAATTTACGTTACTACTCCAGGTCTCAACACCTaGCTTCATATAGTCTCTTTTCACTTTCTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: WSIYVTTPGLNT*LHIVSFHFLFA
Trigger: TGCAAAAAGAAAGTGAAAAGAGACTATATGAAGCAAGGTGTTGAGACCTGGAGTAGTAACGTAAATTGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS TCA 90 bp GCGAAGCTGCTGGTCAACATCTGCCGCAGGGTCTCCAGGTGCTGCTaGAGGACGGTGTTTCGGCTCCGCTCCTGGATCACGTCAACCTCC +
Preference number: 5 (lower is better)
Translates to: AKLLVNICRRVSRCC*RTVFRLRSWITSTS
Trigger: GGAGGTTGACGTGATCCAGGAGCGGAGCCGAAACACCGTCCTTCAGCAGCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAGCTTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 90 bp TTGGTATTTCTCCACTTCCAGGCAAGGGCATGCTGGCGAAGCTGCTaGTCAACATCTGCCGCAGGGTCTCCAGGTGCTGCTGAAGGACGG +
Preference number: 5 (lower is better)
Translates to: LVFLHFQARACWRSC*STSAAGSPGAAEGR
Trigger: CCGTCCTTCAGCAGCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAAGTGGAGAAATACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
CDS GCA 90 bp CTGTTGGTATTTCTCCACTTCCAGGCAAGGGCATGCTGGCGAAGCTaGTGGTCAACATCTGCCGCAGGGTCTCCAGGTGCTGCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: LLVFLHFQARACWRS*WSTSAAGSPGAAEG
Trigger: TCCTTCAGCAGCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAAGTGGAGAAATACCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
CDS CCA 90 bp TCTGAAGCAGCTGGCCTTGGGAGAGATCCTCCACAAACTCTGGGTTaGTTGTTGATGTGGCTGCACTGCCATACGGACCCTCGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SEAAGLGRDPPQTLG*LLMWLHCHTDPRGV
Trigger: CACACCCCGAGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 90 bp GCTCCTGGATCACGTCAACCTCCAGCTTCTCCACTGCTGTGCGCATaGTCTCCACGTGCTTCTGTAGGGCTGCGTTCCTCTCTTCAAACT +
Preference number: 5 (lower is better)
Translates to: APGSRQPPASPLLCA*SPRASVGLRSSLQT
Trigger: AGTTTGAAGAGAGGAACGCAGCCCTACAGAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGCTGGAGGTTGACGTGATCCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 90 bp GGCCTTGGGAGAGATCCTCCACAAACTCTGGGTTGGTTGTTGATGTaGCTGCACTGCCATACGGACCCTCGGGGTGTGTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: GLGRDPPQTLGWLLM*LHCHTDPRGVLTQM
Trigger: CATCTGGGTTAACACACCCCGAGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCTCCCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp CAGGAGAGAACGCAGTGTGGAGAAGTGTGGTGCAGCCACAGCATGGGGGCTCTGGAACCTCTGGTCTCTTaGCTCGAAGCTGTTCTCTAC +
Preference number: 5 (lower is better)
Translates to: QERTQCGEVWCSHSMGALEPLVS*LEAVLY
Trigger: GTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTTC...CAGAGCCCCCATGCTGTGGCTGCACCACACTTCTCCACACTGCGTTCTCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS GCA 90 bp CCCAGATGTAGCCAGATCATTGCTCTCCTTGGAGCCATCTTCATCTaGAAACAGGGGCGGCAGGGTAGAACTGGCCATCAAGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PRCSQIIALLGAIFI*KQGRQGRTGHQALH
Trigger: ATGGAGAGCTTGATGGCCAGTTCTACCCTGCCGCCCCTGTTTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCTGGCTACATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034879.5
ENSMUST00000213242.2
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 90 bp ACGTCAACCTCCAGCTTCTCCACTGCTGTGCGCATGCTCTCCACGTaGTTCTGTAGGGCTGCGTTCCTCTCTTCAAACTCCATGTTGGAT +
Preference number: 5 (lower is better)
Translates to: TSTSSFSTAVRMLST*FCRAAFLSSNSMLD
Trigger: ATCCAACATGGAGTTTGAAGAGAGGAACGCAGCCCTACAGAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGCTGGAGGTTGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 90 bp CCACGTGCTTCTGTAGGGCTGCGTTCCTCTCTTCAAACTCCATGTTaGATTTACGAAGCTGGCGGAGCTCTGCCTCACGAGCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: PRASVGLRSSLQTPC*IYEAGGALPHELCC
Trigger: ACAGCAAAGCTCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGAGAGGAACGCAGCCCTACAGAAGCACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS TCA 90 bp TCAGGCCTTTGCTCATTGCCTTCTACAGCATTGGAAGCCTCACTCTaGAGCAGCTGGCCTTGGGAGAGATCCTCCACAAACTCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: SGLCSLPSTALEASL*SSWPWERSSTNSGL
Trigger: CAACCCAGAGTTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GCTGTGGCTGGGATTCCATGTCTGAGCAGGAGTAATGCTCAGAGATCAGCAGGCCTGTCGGGCTGCATCTaGCCTATGAGATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: AVAGIPCLSRSNAQRSAGLSGCI*PMRFAF
Trigger: AAAGGCAAATCTCATAGGCAAGATGCAGCCCGACAG...GCCTGCTGATCTCTGAGCATTACTCCTGCTCAGACATGGAATCCCAGCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp TGGGTGAGCACTCACCAGCGCTTAACGATCAAGCCTGTTCACAACCTCTCGGACCTGTCGGGCTGCATCTaGCCTATGAGATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: WVSTHQRLTIKPVHNLSDLSGCI*PMRFAF
Trigger: AAAGGCAAATCTCATAGGCAAGATGCAGCCCGACAG...GTCCGAGAGGTTGTGAACAGGCTTGATCGTTAAGCGCTGGTGAGTGCTCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GCTGTGGCTGGGATTCCATGTCTGAGCAGGAGTAATGCTCAGAGATCAGCAGGCTCTGCCTCACGAGCTTaGCTGTGGTTCAGGAATTCT +
Preference number: 5 (lower is better)
Translates to: AVAGIPCLSRSNAQRSAGSASRA*LWFRNS
Trigger: AGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAGA...GCCTGCTGATCTCTGAGCATTACTCCTGCTCAGACATGGAATCCCAGCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS CCA 90 bp AGGGCTGCGTTCCTCTCTTCAAACTCCATGTTGGATTTACGAAGCTaGCGGAGCTCTGCCTCACGAGCTTTGCTGTGGTTCAGGAATTCT +
Preference number: 5 (lower is better)
Translates to: RAAFLSSNSMLDLRS*RSSASRALLWFRNS
Trigger: AGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGAGAGGAACGCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 90 bp CACTTACCTCATCTTCAGGCCTTTGCTCATTGCCTTCTACAGCATTaGAAGCCTCACTCTGAAGCAGCTGGCCTTGGGAGAGATCCTCCA +
Preference number: 5 (lower is better)
Translates to: HLPHLQAFAHCLLQH*KPHSEAAGLGRDPP
Trigger: TGGAGGATCTCTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAGGTAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CAA 90 bp GTGAGTTCTAGGACAGCTGAGCCACACAGAGCAACCCTGTCTCCAAAACCAAACCAAACTCTGGGTTGGTaGTTGATGTGGCTGCACTGC +
Preference number: 5 (lower is better)
Translates to: VSSRTAEPHRATLSPKPNQTLGW*LMWLHC
Trigger: GCAGTGCAGCCACATCAACAACCAACCCAGAGTTTG...GTTTGGTTTTGGAGACAGGGTTGCTCTGTGTGGCTCAGCTGTCCTAGAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CAA 90 bp GGACCCTATGGGAGGGAGAAGGAGTCATTAAGTGATCTGGCACTTGTGACTTTGCTGAAGCAGCTGGCCTaGGGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: GPYGREKESLSDLALVTLLKQLA*GEILHK
Trigger: TTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAG...CAAAGTCACAAGTGCCAGATCACTTAATGACTCCTTCTCCCTCCCATAGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS GCA 90 bp GCTGGTCTGGAACTCACAGATATCTTTCTGCCCCTGCCTCCTGAGTaGTGGGATTTAAGACATGCCCAGACCGCACTGAAAATCTTGACA +
Preference number: 5 (lower is better)
Translates to: AGLELTDIFLPLPPE*WDLRHAQTALKILT
Trigger: TGTCAAGATTTTCAGTGCGGTCTGGGCATGTCTTAAATCCCAGCACTCAGGAGGCAGGGGCAGAAAGATATCTGTGAGTTCCAGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp ATCAGGCTGGTGTGGAAACTCATAGAGATCCACCTGCCTCTGTATCCCAAGTGTACTCTGGGTTGGTTGTaGATGTGGCTGCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: IRLVWKLIEIHLPLYPKCTLGWL*MWLHCH
Trigger: ATGGCAGTGCAGCCACATCAACAACCAACCCAGAGT...ACACTTGGGATACAGAGGCAGGTGGATCTCTATGAGTTTCCACACCAGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp CTAGATCAGGCTGGTGTGGAAACTCATAGAGATCCACCTGCCTCTGTATCCCAACAAACTCTGGGTTGGTaGTTGATGTGGCTGCACTGC +
Preference number: 5 (lower is better)
Translates to: LDQAGVETHRDPPASVSQQTLGW*LMWLHC
Trigger: GCAGTGCAGCCACATCAACAACCAACCCAGAGTTTG...TTGGGATACAGAGGCAGGTGGATCTCTATGAGTTTCCACACCAGCCTGATCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp CAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCAAACCCTCCTTGCATGCCCATaGCTTTGGAAGCCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: QSNPVSKTKRNQTKPNQTLLACP*LWKPQW
Trigger: CCACTGCGGCTTCCAAAGCAATGGGCATGCAAGGAG...GGTTTGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CAA 90 bp CTTCCAGAGCTGCACACAGGGCATTTCTACAGAGTTCACGCATCCATCTTTGTTCAAACTCTGGGTTGGTaGTTGATGTGGCTGCACTGC +
Preference number: 5 (lower is better)
Translates to: LPELHTGHFYRVHASIFVQTLGW*LMWLHC
Trigger: GCAGTGCAGCCACATCAACAACCAACCCAGAGTTTG...AACAAAGATGGATGCGTGAACTCTGTAGAAATGCCCTGTGTGCAGCTCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp CCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCAACAGATGGGCTCATCTTCAGGCCTTaGCTCATTGCCTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: PMTFSSAKVLHKTLPTDGLIFRP*LIAFYS
Trigger: GCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAG...CCCATCTGTTGGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp TCCCTCTCTGCCAATGACCTTTTCCTCAGCAAAAGTGCTCCACAAGACACTGCCTCTTCAAACTCCATGTaGGATTTACGAAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: SLSANDLFLSKSAPQDTASSNSM*DLRSWR
Trigger: CCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGA...GGCAGTGTCTTGTGGAGCACTTTTGCTGAGGAAAAGGTCATTGGCAGAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS TCA 90 bp CTTGCCTATGAGATTTGCCTTTCTGACGGTCCTGTGTTTTCCTACTaGAGACCTTGTAGGCCTCGGTCTTCTGATACTGCTCCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LAYEICLSDGPVFSY*RPCRPRSSDTAPVP
Trigger: AGGAACTGGAGCAGTATCAGAAGACCGAGGCCTACAAGGTCTTCAGTAGGAAAACACAGGACCGTCAGAAAGGCAAATCTCATAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS TCA 90 bp AATACCTCCTTGCATGCCCATTGCTTTGGAAGCCGCAGTGGACAGTaGCAGGAGATGTTCACTTACCTCATCTTCAGGCCTTTGCTCATT +
Preference number: 5 (lower is better)
Translates to: NTSLHAHCFGSRSGQ*QEMFTYLIFRPLLI
Trigger: AATGAGCAAAGGCCTGAAGATGAGGTAAGTGAACATCTCCTGTCACTGTCCACTGCGGCTTCCAAAGCAATGGGCATGCAAGGAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CAA 90 bp GGCAGTTGGTGGCTACAGAGGAAAGCAAAACATAAGCAGAGTCCACCATGCCTTAGATCATTGCTCTCCTaGGAGCCATCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: GSWWLQRKAKHKQSPPCLRSLLS*EPSSSA
Trigger: TGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCT...AAGGCATGGTGGACTCTGCTTATGTTTTGCTTTCCTCTGTAGCCACCAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTACTCTGGGTTGGTTGTaGATGTGGCTGCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: RRLLAITEQGSESNLPSVTLGWL*MWLHCH
Trigger: ATGGCAGTGCAGCCACATCAACAACCAACCCAGAGT...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp AGAGATCCACCTGCCTCTGTATCCCAAGTGTTGAGATTAAAAGTGTACCACCATCTGAAGCAGCTGGCCTaGGGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: RDPPASVSQVLRLKVYHHLKQLA*GEILHK
Trigger: TTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAG...ATGGTGGTACACTTTTAATCTCAACACTTGGGATACAGAGGCAGGTGGATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GGAGAGAAGGAAGCTGTCTTTTCCACAGATTTCATAGATTCGGCAGTTGGTGGCGGGGATTTAGGTGCATaGCTGTCTCGAAGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: GEKEAVFSTDFIDSAVGGGDLGA*LSRRGF
Trigger: GAAACCTCTTCGAGACAGCAATGCACCTAAATCCCC...GCCACCAACTGCCGAATCTATGAAATCTGTGGAAAAGACAGCTTCCTTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS GCA 90 bp CCTCTCTTCAAACTCCATGTTGGATTTACGAAGCTGGCGGAGCTCTaGCTCACGAGCTTTGCTGTGGTTCAGGAATTCTTCGGTAAATAT +
Preference number: 5 (lower is better)
Translates to: PLFKLHVGFTKLAEL*LTSFAVVQEFFGKY
Trigger: ATATTTACCGAAGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp AATGGAATGTGTAACACTGAGTTGGTAACTGCTTCCTTCTTGAGGAGAGCTTGCACTCTGGGTTGGTTGTaGATGTGGCTGCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: NGMCNTELVTASFLRRACTLGWL*MWLHCH
Trigger: ATGGCAGTGCAGCCACATCAACAACCAACCCAGAGT...GCAAGCTCTCCTCAAGAAGGAAGCAGTTACCAACTCAGTGTTACACATTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp CAGGCAACTGATCTGCTATGTGCTACCACCCAAACCCCTTTGTATTTTCCTTTAACTCTGGGTTGGTTGTaGATGTGGCTGCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: QATDLLCATTQTPLYFPLTLGWL*MWLHCH
Trigger: ATGGCAGTGCAGCCACATCAACAACCAACCCAGAGT...TAAAGGAAAATACAAAGGGGTTTGGGTGGTAGCACATAGCAGATCAGTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp GATATGGCTCTAGATATGGCAAGAGATACGTATGAGAAAGCTGGGCAAGTCTCAACTCTGGGTTGGTTGTaGATGTGGCTGCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: DMALDMARDTYEKAGQVSTLGWL*MWLHCH
Trigger: ATGGCAGTGCAGCCACATCAACAACCAACCCAGAGT...TGAGACTTGCCCAGCTTTCTCATACGTATCTCTTGCCATATCTAGAGCCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CAA 90 bp CAGGCAACTGATCTGCTATGTGCTACCACCCAAACCCCTTTGTATTTTCCTTTACAAACTCTGGGTTGGTaGTTGATGTGGCTGCACTGC +
Preference number: 5 (lower is better)
Translates to: QATDLLCATTQTPLYFPLQTLGW*LMWLHC
Trigger: GCAGTGCAGCCACATCAACAACCAACCCAGAGTTTG...TAAAGGAAAATACAAAGGGGTTTGGGTGGTAGCACATAGCAGATCAGTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp TCCACAGATTTCATAGATTCGGCAGTTGGTGGCTACAGAGGAAAGCAAAACATACTGAAGCAGCTGGCCTaGGGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: STDFIDSAVGGYRGKQNILKQLA*GEILHK
Trigger: TTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAG...TATGTTTTGCTTTCCTCTGTAGCCACCAACTGCCGAATCTATGAAATCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp CAGAGGATCCCTATTCTTAGGAAATACAAAAGTCTTCTGGGGGTAAAGGGCCAGCTCATCTTCAGGCCTTaGCTCATTGCCTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: QRIPILRKYKSLLGVKGQLIFRP*LIAFYS
Trigger: GCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAG...CTGGCCCTTTACCCCCAGAAGACTTTTGTATTTCCTAAGAATAGGGATCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp CAGAGGATCCCTATTCTTAGGAAATACAAAAGTCTTCTGGGGGTAAAGGGCCAGGGGGATTTAGGTGCATaGCTGTCTCGAAGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: QRIPILRKYKSLLGVKGQGDLGA*LSRRGF
Trigger: GAAACCTCTTCGAGACAGCAATGCACCTAAATCCCC...CTGGCCCTTTACCCCCAGAAGACTTTTGTATTTCCTAAGAATAGGGATCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp CAGAGGATCCCTATTCTTAGGAAATACAAAAGTCTTCTGGGGGTAAAGGGCCAGGAACCTCTGGTCTCTTaGCTCGAAGCTGTTCTCTAC +
Preference number: 5 (lower is better)
Translates to: QRIPILRKYKSLLGVKGQEPLVS*LEAVLY
Trigger: GTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTTC...CTGGCCCTTTACCCCCAGAAGACTTTTGTATTTCCTAAGAATAGGGATCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp TCTGCCCCGTCTCAGTTCAAATGTTCATGGGAAGCTTCTCATTCTGCACAAGTGCAATGGTGTCCACTGTaGGTATTTCTCCACTTCCAG +
Preference number: 5 (lower is better)
Translates to: SAPSQFKCSWEASHSAQVQWCPL*VFLHFQ
Trigger: CTGGAAGTGGAGAAATACCAACAGTGGACACCATTG...CACTTGTGCAGAATGAGAAGCTTCCCATGAACATTTGAACTGAGACGGGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp TCCCCTCCAATCTCTCTAACAAAAGCTTTCTTCACTGTGACAACAGAGTTAGTTCTGAAGCAGCTGGCCTaGGGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: SPPISLTKAFFTVTTELVLKQLA*GEILHK
Trigger: TTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAG...AACTAACTCTGTTGTCACAGTGAAGAAAGCTTTTGTTAGAGAGATTGGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp AGAGATCCACCTGCCTCTGTATCCCAAGTGTTGAGATTAAAAGTGTACCACCATCTCATCTTCAGGCCTTaGCTCATTGCCTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: RDPPASVSQVLRLKVYHHLIFRP*LIAFYS
Trigger: GCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAG...ATGGTGGTACACTTTTAATCTCAACACTTGGGATACAGAGGCAGGTGGATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp AGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAAACCTCCCCTCAGTTTCTTCAAACTCCATGTaGGATTTACGAAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RRLLAITEQGSESNLPSVSSNSM*DLRSWR
Trigger: CCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGA...AACTGAGGGGAGGTTTGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp ACACAGAGCAACCCTGTCTCCAAAACCAAACGAAACCAAACCAAACCAAACCAAAGATCATTGCTCTCCTaGGAGCCATCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: TQSNPVSKTKRNQTKPNQRSLLS*EPSSSA
Trigger: TGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCT...TTGGTTTGGTTTGGTTTGGTTTCGTTTGGTTTTGGAGACAGGGTTGCTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CAA 90 bp AATGGAATGTGTAACACTGAGTTGGTAACTGCTTCCTTCTTGAGGAGAGCTTGCTTCCTTTTTCTCCCTTaGGACCAACCTCCTCGTTTA +
Preference number: 5 (lower is better)
Translates to: NGMCNTELVTASFLRRACFLFLP*DQPPRL
Trigger: TAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGAA...GCAAGCTCTCCTCAAGAAGGAAGCAGTTACCAACTCAGTGTTACACATTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp AGAGATCCACCTGCCTCTGTATCCCAAGTGTTGAGATTAAAAGTGTACCACCATTTCCTTTTTCTCCCTTaGGACCAACCTCCTCGTTTA +
Preference number: 5 (lower is better)
Translates to: RDPPASVSQVLRLKVYHHFLFLP*DQPPRL
Trigger: TAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGAA...ATGGTGGTACACTTTTAATCTCAACACTTGGGATACAGAGGCAGGTGGATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GAAGCTACTGCTGTGACAAGAACTCCATCGTGGAGATTCCCTTGCTATCCTACTGCTATGAAGTTTTCGTaGTCTTGGGGATTAGCTAAA +
Preference number: 5 (lower is better)
Translates to: EATAVTRTPSWRFPCYPTAMKFS*SWGLAK
Trigger: TTTAGCTAATCCCCAAGACAACGAAAACTTCATAGC...AGTAGGATAGCAAGGGAATCTCCACGATGGAGTTCTTGTCACAGCAGTAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034879.5
CDS-3UTR CAA 90 bp TCCCCTCCAATCTCTCTAACAAAAGCTTTCTTCACTGTGACAACAGAGTTAGTTAGATCATTGCTCTCCTaGGAGCCATCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: SPPISLTKAFFTVTTELVRSLLS*EPSSSA
Trigger: TGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCT...AACTAACTCTGTTGTCACAGTGAAGAAAGCTTTTGTTAGAGAGATTGGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp AAGTCTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCCAAACTCTGGGTTGGTaGTTGATGTGGCTGCACTGC +
Preference number: 5 (lower is better)
Translates to: KSGFNIIEKTSSNYRAGIQTLGW*LMWLHC
Trigger: GCAGTGCAGCCACATCAACAACCAACCCAGAGTTTG...GATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCCTGAAGCAGCTGGCCTaGGGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: KLELSSDNKNQVASIKQALKQLA*GEILHK
Trigger: TTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAG...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGCTCATCTTCAGGCCTTaGCTCATTGCCTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: LVLISLRRLLAITEQGSELIFRP*LIAFYS
Trigger: GCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAG...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp ACAACAAATCTTGGGACAGTTTCTCCTCACTGTGCTAGACACAAGAACCACAAATTCCTTTTTCTCCCTTaGGACCAACCTCCTCGTTTA +
Preference number: 5 (lower is better)
Translates to: TTNLGTVSPHCARHKNHKFLFLP*DQPPRL
Trigger: TAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGAA...TTTGTGGTTCTTGTGTCTAGCACAGTGAGGAGAAACTGTCCCAAGATTTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214771.2
CDS-3UTR CAA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGGAACCTCTGGTCTCTTaGCTCGAAGCTGTTCTCTAC +
Preference number: 5 (lower is better)
Translates to: LVLISLRRLLAITEQGSEEPLVS*LEAVLY
Trigger: GTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTTC...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp CTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGCTGTCGGGCTGCATCTaGCCTATGAGATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LVLISLRRLLAITEQGSELSGCI*PMRFAF
Trigger: AAAGGCAAATCTCATAGGCAAGATGCAGCCCGACAG...CTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp ATTTTAGCCTCGAAGACAGGAAGTTTATCTTTATATTCTGTGATGGTTTGGGTGCCTTCTCTTTTCCTCTaGGGAGACACTGCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ILASKTGSLSLYSVMVWVPSLFL*GDTAAS
Trigger: AGAAGCCGCAGTGTCTCCCAAGAGGAAAAGAGAAGG...CACCCAAACCATCACAGAATATAAAGATAAACTTCCTGTCTTCGAGGCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp AAGTCTGGTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCAGATCATTGCTCTCCTaGGAGCCATCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: KSGFNIIEKTSSNYRAGIRSLLS*EPSSSA
Trigger: TGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCT...GATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAACCAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp CTATGTATTAACTGTAGTACTGTACTCCTCCAAATATATGTGAATGGTGACAGACTCATCTTCAGGCCTTaGCTCATTGCCTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: LCINCSTVLLQIYVNGDRLIFRP*LIAFYS
Trigger: GCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAG...TCTGTCACCATTCACATATATTTGGAGGAGTACAGTACTACAGTTAATACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS-3UTR CAA 90 bp ACATGTCTAAGAAACCACCTCAAGTCTGGTTTTAATATCATTGAGAAGACTTCTGGGGATTTAGGTGCATaGCTGTCTCGAAGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: TCLRNHLKSGFNIIEKTSGDLGA*LSRRGF
Trigger: GAAACCTCTTCGAGACAGCAATGCACCTAAATCCCC...AGAAGTCTTCTCAATGATATTAAAACCAGACTTGAGGTGGTTTCTTAGACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp AAACTAGAATTGAGTTCTGACAACAAAAATCAAGTCGCTTCCATTAAACAAGCCGAACCTCTGGTCTCTTaGCTCGAAGCTGTTCTCTAC +
Preference number: 5 (lower is better)
Translates to: KLELSSDNKNQVASIKQAEPLVS*LEAVLY
Trigger: GTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTTC...GGCTTGTTTAATGGAAGCGACTTGATTTTTGTTGTCAGAACTCAATTCTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp ACATGTCTAAGAAACCACCTCAAGTCTGGTTTTAATATCATTGAGAAGACTTCTTCTGCCTCACGAGCTTaGCTGTGGTTCAGGAATTCT +
Preference number: 5 (lower is better)
Translates to: TCLRNHLKSGFNIIEKTSSASRA*LWFRNS
Trigger: AGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAGA...AGAAGTCTTCTCAATGATATTAAAACCAGACTTGAGGTGGTTTCTTAGACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp TTAGCTAAAATTATACTGTGCAATCTGTTCATGTATGAGTCAATGGTGTCCACTTCTGCCTCACGAGCTTaGCTGTGGTTCAGGAATTCT +
Preference number: 5 (lower is better)
Translates to: LAKIILCNLFMYESMVSTSASRA*LWFRNS
Trigger: AGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAGA...AGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTTTAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCATCTTCAAACTCCATGTaGGATTTACGAAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: VLISLRRLLAITEQGSESSSNSM*DLRSWR
Trigger: CCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGA...TGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCACAATGGTGTCCACTGTaGGTATTTCTCCACTTCCAG +
Preference number: 5 (lower is better)
Translates to: VLISLRRLLAITEQGSESQWCPL*VFLHFQ
Trigger: CTGGAAGTGGAGAAATACCAACAGTGGACACCATTG...TGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215269.2
CDS-3UTR CAA 90 bp AATTTTAGCCTCGAAGACAGGAAGTTTATCTTTATATTCTGTGATGGTTTGGGTAGATCATTGCTCTCCTaGGAGCCATCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: NFSLEDRKFIFIFCDGLGRSLLS*EPSSSA
Trigger: TGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCT...ACCCAAACCATCACAGAATATAAAGATAAACTTCCTGTCTTCGAGGCTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCATTCCTTTTTCTCCCTTaGGACCAACCTCCTCGTTTA +
Preference number: 5 (lower is better)
Translates to: VLISLRRLLAITEQGSESFLFLP*DQPPRL
Trigger: TAAACGAGGAGGTTGGTCCAAAGGGAGAAAAAGGAA...TGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS-3UTR CAA 90 bp GTTTTAATATCATTGAGAAGACTTCTAGCAATTACAGAGCAGGGATCTGAGTCAGCTATGAAGTTTTCGTaGTCTTGGGGATTAGCTAAA +
Preference number: 5 (lower is better)
Translates to: VLISLRRLLAITEQGSESAMKFS*SWGLAK
Trigger: TTTAGCTAATCCCCAAGACAACGAAAACTTCATAGC...TGACTCAGATCCCTGCTCTGTAATTGCTAGAAGTCTTCTCAATGATATTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215269.2
CDS TCA 72 bp CTGGTCAACATCTGCCGCAGGGTCTCCAGGTGCTGCTaGAGGACGGTGTTTCGGCTCCGCTCCTGGATCACG +
Preference number: 6 (lower is better)
Translates to: LVNICRRVSRCC*RTVFRLRSWIT
Trigger: CGTGATCCAGGAGCGGAGCCGAAACACCGTCCTTCAGCAGCACCTGGAGACCCTGCGGCAGATGTTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp CTCCACTTCCAGGCAAGGGCATGCTGGCGAAGCTGCTaGTCAACATCTGCCGCAGGGTCTCCAGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LHFQARACWRSC*STSAAGSPGAA
Trigger: AGCAGCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
CDS GCA 72 bp TTTCTCCACTTCCAGGCAAGGGCATGCTGGCGAAGCTaGTGGTCAACATCTGCCGCAGGGTCTCCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: FLHFQARACWRS*WSTSAAGSPGA
Trigger: AGCACCTGGAGACCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAAGTGGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
CDS CAA 90 bp GCAGCTGGCCTTGGGAGAGATCCTCCACAAACTCTGGGTTGGTTGTaGATGTGGCTGCACTGCCATACGGACCCTCGGGGTGTGTTAACC +
Preference number: 6 (lower is better)
Translates to: AAGLGRDPPQTLGWL*MWLHCHTDPRGVLT
Trigger: GGTTAACACACCCCGAGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCTCCCAAGGCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 72 bp TCACGTCAACCTCCAGCTTCTCCACTGCTGTGCGCATaGTCTCCACGTGCTTCTGTAGGGCTGCGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SRQPPASPLLCA*SPRASVGLRSS
Trigger: AGAGGAACGCAGCCCTACAGAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGCTGGAGGTTGACGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 72 bp CCACTGTTGGTATTTCTCCACTTCCAGGCAAGGGCATaGTGGCGAAGCTGCTGGTCAACATCTGCCGCAGGG +
Preference number: 6 (lower is better)
Translates to: PLLVFLHFQARA*WRSCWSTSAAG
Trigger: CCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAAGTGGAGAAATACCAACAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
CDS CAA 72 bp GGCCTTGGGAGAGATCCTCCACAAACTCTGGGTTGGTaGTTGATGTGGCTGCACTGCCATACGGACCCTCGG +
Preference number: 6 (lower is better)
Translates to: GLGRDPPQTLGW*LMWLHCHTDPR
Trigger: CCGAGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCTCCCAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CAA 90 bp CCATACGGACCCTCGGGGTGTGTTAACCCAGATGTAGCCAGATCATaGCTCTCCTTGGAGCCATCTTCATCTGCAAACAGGGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: PYGPSGCVNPDVARS*LSLEPSSSANRGGR
Trigger: CCTGCCGCCCCTGTTTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCTGGCTACATCTGGGTTAACACACCCCGAGGGTCCGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp GCTGGCCTTGGGAGAGATCCTCCACAAACTCTGGGTTaGTTGTTGATGTGGCTGCACTGCCATACGGACCCT +
Preference number: 6 (lower is better)
Translates to: AGLGRDPPQTLG*LLMWLHCHTDP
Trigger: AGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCTCCCAAGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp CTGTTGGTATTTCTCCACTTCCAGGCAAGGGCATGCTaGCGAAGCTGCTGGTCAACATCTGCCGCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: LLVFLHFQARAC*RSCWSTSAAGS
Trigger: AGACCCTGCGGCAGATGTTGACCAGCAGCTTCGCCAGCATGCCCTTGCCTGGAAGTGGAGAAATACCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
CDS CAA 72 bp CTTGGGAGAGATCCTCCACAAACTCTGGGTTGGTTGTaGATGTGGCTGCACTGCCATACGGACCCTCGGGGT +
Preference number: 6 (lower is better)
Translates to: LGRDPPQTLGWL*MWLHCHTDPRG
Trigger: ACCCCGAGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CAA 72 bp AGCTGGCCTTGGGAGAGATCCTCCACAAACTCTGGGTaGGTTGTTGATGTGGCTGCACTGCCATACGGACCC +
Preference number: 6 (lower is better)
Translates to: SWPWERSSTNSG*VVDVAALPYGP
Trigger: GGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCTCCCAAGGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CAA 90 bp CCCTCGGGGTGTGTTAACCCAGATGTAGCCAGATCATTGCTCTCCTaGGAGCCATCTTCATCTGCAAACAGGGGCGGCAGGGTAGAACTG +
Preference number: 6 (lower is better)
Translates to: PSGCVNPDVARSLLS*EPSSSANRGGRVEL
Trigger: CAGTTCTACCCTGCCGCCCCTGTTTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCTGGCTACATCTGGGTTAACACACCCCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 72 bp CCACAAACTCTGGGTTGGTTGTTGATGTGGCTGCACTaGCATACGGACCCTCGGGGTGTGTTAACCCAGATG +
Preference number: 6 (lower is better)
Translates to: PQTLGWLLMWLH*HTDPRGVLTQM
Trigger: CATCTGGGTTAACACACCCCGAGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CAA 90 bp TCCACGTGCTTCTGTAGGGCTGCGTTCCTCTCTTCAAACTCCATGTaGGATTTACGAAGCTGGCGGAGCTCTGCCTCACGAGCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: STCFCRAAFLSSNSM*DLRSWRSSASRALL
Trigger: CAGCAAAGCTCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGAGAGGAACGCAGCCCTACAGAAGCACGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 72 bp AGCCAGATCATTGCTCTCCTTGGAGCCATCTTCATCTaGAAACAGGGGCGGCAGGGTAGAACTGGCCATCAA +
Preference number: 6 (lower is better)
Translates to: SQIIALLGAIFI*KQGRQGRTGHQ
Trigger: TTGATGGCCAGTTCTACCCTGCCGCCCCTGTTTGCAGATGAAGATGGCTCCAAGGAGAGCAATGATCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034879.5
ENSMUST00000213242.2
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp AGAGATCCTCCACAAACTCTGGGTTGGTTGTTGATGTaGCTGCACTGCCATACGGACCCTCGGGGTGTGTTA +
Preference number: 6 (lower is better)
Translates to: RDPPQTLGWLLM*LHCHTDPRGVL
Trigger: TAACACACCCCGAGGGTCCGTATGGCAGTGCAGCCACATCAACAACCAACCCAGAGTTTGTGGAGGATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS TCA 72 bp TGCTCATTGCCTTCTACAGCATTGGAAGCCTCACTCTaGAGCAGCTGGCCTTGGGAGAGATCCTCCACAAAC +
Preference number: 6 (lower is better)
Translates to: CSLPSTALEASL*SSWPWERSSTN
Trigger: GTTTGTGGAGGATCTCTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAATGCTGTAGAAGGCAATGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp CATCTTCAGGCCTTTGCTCATTGCCTTCTACAGCATTaGAAGCCTCACTCTGAAGCAGCTGGCCTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: HLQAFAHCLLQH*KPHSEAAGLGR
Trigger: TCTCCCAAGGCCAGCTGCTTCAGAGTGAGGCTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000214869.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CAA 72 bp TTCTGTAGGGCTGCGTTCCTCTCTTCAAACTCCATGTaGGATTTACGAAGCTGGCGGAGCTCTGCCTCACGA +
Preference number: 6 (lower is better)
Translates to: FCRAAFLSSNSM*DLRSWRSSASR
Trigger: TCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGAGAGGAACGCAGCCCTACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS TCA 72 bp TTGCATGCCCATTGCTTTGGAAGCCGCAGTGGACAGTaGCAGGAGATGTTCACTTACCTCATCTTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LHAHCFGSRSGQ*QEMFTYLIFRP
Trigger: AGGCCTGAAGATGAGGTAAGTGAACATCTCCTGTCACTGTCCACTGCGGCTTCCAAAGCAATGGGCATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS CCA 72 bp TTCCTCTCTTCAAACTCCATGTTGGATTTACGAAGCTaGCGGAGCTCTGCCTCACGAGCTTTGCTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: FLSSNSMLDLRS*RSSASRALLWF
Trigger: GAACCACAGCAAAGCTCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAACATGGAGTTTGAAGAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 72 bp AAACTCCATGTTGGATTTACGAAGCTGGCGGAGCTCTaGCTCACGAGCTTTGCTGTGGTTCAGGAATTCTTC +
Preference number: 6 (lower is better)
Translates to: KLHVGFTKLAEL*LTSFAVVQEFF
Trigger: GAAGAATTCCTGAACCACAGCAAAGCTCGTGAGGCAGAGCTCCGCCAGCTTCGTAAATCCAACATGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp TACCTCCTTGCATGCCCATTGCTTTGGAAGCCGCAGTaGACAGTGACAGGAGATGTTCACTTACCTCATCTT +
Preference number: 6 (lower is better)
Translates to: YLLACPLLWKPQ*TVTGDVHLPHL
Trigger: AAGATGAGGTAAGTGAACATCTCCTGTCACTGTCCACTGCGGCTTCCAAAGCAATGGGCATGCAAGGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS TCA 72 bp GAGATTTGCCTTTCTGACGGTCCTGTGTTTTCCTACTaGAGACCTTGTAGGCCTCGGTCTTCTGATACTGCT +
Preference number: 6 (lower is better)
Translates to: EICLSDGPVFSY*RPCRPRSSDTA
Trigger: AGCAGTATCAGAAGACCGAGGCCTACAAGGTCTTCAGTAGGAAAACACAGGACCGTCAGAAAGGCAAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 72 bp CCTCCTCGTTTACTTCTTTGCTCATCTTCAGGCCTTTaGTCATTGCCTTCTACAGCATTGGAAGCCTCACTC +
Preference number: 6 (lower is better)
Translates to: PPRLLLCSSSGL*SLPSTALEASL
Trigger: GAGTGAGGCTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAGCAAAGAAGTAAACGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS GCA 72 bp GACAGGAGATGTTCACTTACCTCATCTTCAGGCCTTTaGTCATTGCCTTCTACAGCATTGGAAGCCTCACTC +
Preference number: 6 (lower is better)
Translates to: DRRCSLTSSSGL*SLPSTALEASL
Trigger: GAGTGAGGCTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAGGTAAGTGAACATCTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214869.2
CDS CAA 72 bp GCAATCTGTTCATGTATGAGTCAATGGTGTCCACTGTaGGTATTTCTCCACTTCCAGGCAAGGGCATGCTGG +
Preference number: 6 (lower is better)
Translates to: AICSCMSQWCPL*VFLHFQARACW
Trigger: CCAGCATGCCCTTGCCTGGAAGTGGAGAAATACCAACAGTGGACACCATTGACTCATACATGAACAGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
CDS GCA 72 bp CCTTGTGATTTCTGGAAATGGAACCTCTGGTCTCTTTaGTCGAAGCTGTTCTCTACGCTCGTTCATGAATCG +
Preference number: 6 (lower is better)
Translates to: PCDFWKWNLWSL*SKLFSTLVHES
Trigger: CGATTCATGAACGAGCGTAGAGAACAGCTTCGAGCAAAGAGACCAGAGGTTCCATTTCCAGAAATCACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp GTTCCTTTACCTCTGTTTCTTTCTCATGATCATGAGTaGCCTGTCGGGCTGCATCTTGCCTATGAGATTTGC +
Preference number: 6 (lower is better)
Translates to: VPLPLFLSHDHE*PVGLHLAYEIC
Trigger: GCAAATCTCATAGGCAAGATGCAGCCCGACAGGCCACTCATGATCATGAGAAAGAAACAGAGGTAAAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CAA 72 bp ACCTCCTCGTTTACTTCTTTGCTCATCTTCAGGCCTTaGCTCATTGCCTTCTACAGCATTGGAAGCCTCACT +
Preference number: 6 (lower is better)
Translates to: TSSFTSLLIFRP*LIAFYSIGSLT
Trigger: AGTGAGGCTTCCAATGCTGTAGAAGGCAATGAGCAAAGGCCTGAAGATGAGCAAAGAAGTAAACGAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034879.5
ENSMUST00000214771.2
ENSMUST00000215269.2
ENSMUST00000217518.2
CDS CCA 72 bp AAATTATACTGTGCAATCTGTTCATGTATGAGTCAATaGTGTCCACTGTTGGTATTTCTCCACTTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: KLYCAICSCMSQ*CPLLVFLHFQA
Trigger: TGCCTGGAAGTGGAGAAATACCAACAGTGGACACCATTGACTCATACATGAACAGATTGCACAGTATAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034879.5
ENSMUST00000215269.2