Pregenerated sensors for HMCES (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030060Ensembl transcript IDs: ENSMUST00000032141.14, ENSMUST00000113606.2, ENSMUST00000204232.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTTCTCCATTATGGTATCACTACGACAGTTGGTAGTGTTGAACTaGAGCTTAGAAGGATCACTTTCTTTGAACCAAGATGGGACTAAG | + |
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Preference number: 1 (lower is better) Translates to: CFSIMVSLRQLVVLN*SLEGSLSLNQDGTK Trigger: CTTAGTCCCATCTTGGTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAGTGATACCATAATGGAGAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| 3UTR CAA 90 bp | CGACAGTTGGTAGTGTTGAACTGCAGCTTAGAAGGATCACTTTCTTaGAACCAAGATGGGACTAAGCCCCATCGCATGGGAATAATTATC | + |
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Preference number: 2 (lower is better) Translates to: RQLVVLNCSLEGSLS*NQDGTKPHRMGIII Trigger: GATAATTATTCCCATGCGATGGGGCTTAGTCCCATCTTGGTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| 3UTR CAA 90 bp | AATGACTGCTTCTCCATTATGGTATCACTACGACAGTTGGTAGTGTaGAACTGCAGCTTAGAAGGATCACTTTCTTTGAACCAAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: NDCFSIMVSLRQLVV*NCSLEGSLSLNQDG Trigger: CCCATCTTGGTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAGTGATACCATAATGGAGAAGCAGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| 3UTR CAA 90 bp | GGAACCTTGAATGACTGCTTCTCCATTATGGTATCACTACGACAGTaGGTAGTGTTGAACTGCAGCTTAGAAGGATCACTTTCTTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: GTLNDCFSIMVSLRQ*VVLNCSLEGSLSLN Trigger: GTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAGTGATACCATAATGGAGAAGCAGTCATTCAAGGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTGGTAGTGTTGAACTGCAGCTTAGAAGGATCACTTTCTTTGAACCAAGATTTAATCCCAGCAATTTaGGAGACAGGTAAATCCTTG | + |
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Preference number: 2 (lower is better) Translates to: QLVVLNCSLEGSLSLNQDLIPAI*ETGKSL Trigger: CAAGGATTTACCTGTCTCTCAAATTGCTGGGATTAA...ATCTTGGTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| 3UTR TCA 72 bp | GGCTGTCTCACGGTAGCCATGTTCTTTCAGGTCAGCTaGCATTGGGCCACCACATTCCCAAGTAAAAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: GCLTVAMFFQVS*HWATTFPSKRL Trigger: TAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAAAGAACATGGCTACCGTGAGACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| 3UTR GCA 72 bp | CACCGCCGTCCTTTCCCCAGAGGAACCTTGAATGACTaGTTCTCCATTATGGTATCACTACGACAGTTGGTA | + |
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Preference number: 3 (lower is better) Translates to: HRRPFPRGTLND*FSIMVSLRQLV Trigger: TACCAACTGTCGTAGTGATACCATAATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGAAAGGACGGCGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCCAAGGTTTACCAAACGCAGTTTATTTAGGACAAAATACATTTTAAGACCTTCAGGTCAGCTGACATaGGGCCACCACATTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: QPRFTKRSLFRTKYILRPSGQLT*GHHIPK Trigger: CTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGA...AGGTCTTAAAATGTATTTTGTCCTAAATAAACTGCGTTTGGTAAACCTTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| 3UTR TCA 72 bp | GATCTGATGAGTCTGCATCCTTTAATCCCAGCAATTTaGGAGACAGGTAAATCCTTGCCTTCAAAGACAGTC | + |
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Preference number: 3 (lower is better) Translates to: DLMSLHPLIPAI*ETGKSLPSKTV Trigger: GACTGTCTTTGAAGGCAAGGATTTACCTGTCTCTCAAATTGCTGGGATTAAAGGATGCAGACTCATCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| 3UTR GCA 72 bp | ATTATGGTATCACTACGACAGTTGGTAGTGTTGAACTaGAGCTTAGAAGGATCACTTTCTTTGAACCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: IMVSLRQLVVLN*SLEGSLSLNQD Trigger: ATCTTGGTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAGTGATACCATAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| CDS-3UTR TCA 90 bp | GCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCAGAAAAGGCGCAGGCCCTGGTaGGAACCTCTCTGGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ASFVEHQGTGKLPAGRQKRRRPW*EPLWAS Trigger: ACTTGCCCAGAGAGGTTCTCACCAGGGCCTGCGCCT...TTTCTGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | GCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCAGAAATCTCAAAGTGCAGTCTaGAGAGCAGCACGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ASFVEHQGTGKLPAGRQKSQSAV*RAARGC Trigger: GCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGA...TTTCTGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR GCA 90 bp | GAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCTCATCCTCCTTCTCCTaGTTCAGCCATCGATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EEPPSWNTREQESSQQGGSSSFS*FSHRSR Trigger: CCTGGATCGATGGCTGAAGCAGGAGAAGGAGGATGA...GCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | GAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCTCAGAGCTTCCTGAGTaGCGACCTCACCAAAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: EEPPSWNTREQESSQQGGSELPE*RPHQSR Trigger: TCGACTTTGGTGAGGTCGCCACTCAGGAAGCTCTGA...GCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGTCATCCTCCTTCTCCTaGTTCAGCCATCGATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RRASFVEHQGTGKLPAGRSSSFS*FSHRSR Trigger: CCTGGATCGATGGCTGAAGCAGGAGAAGGAGGATGA...CCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | GCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCAGAAAGCAGGCATCCTGCTGTaGATGTCACTCAAACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ASFVEHQGTGKLPAGRQKAGILL*MSLKPL Trigger: CAGAGGTTTGAGTGACATCCACAGCAGGATGCCTGC...TTTCTGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | TTAACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCCTTCGTGGAACACCAACCTCTCTGGGCAAGTaGCAGGACGTTCGCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: LTLKESPETEKSLLRGTPTSLGK*QDVRPH Trigger: GTGCGGGCGAACGTCCTGTCACTTGCCCAGAGAGGT...TGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCTCCCCAGAGGAACCTTaGATGACTGCTTCTCCATTA | + |
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Preference number: 4 (lower is better) Translates to: EEPPSWNTREQESSQQGGSPEEP*MTASPL Trigger: TAATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGA...GCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | AAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCACTTCTCCATCTAGTATaGCAGGCATCCTGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSLLRGTPGNRKAPSREALLHLV*QASCCG Trigger: TCCACAGCAGGATGCCTGCCATACTAGATGGAGAAG...TGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | GAGACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCTCAGAGCTTCCTGAGTaGCGACCTCACCAAAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: ETEKSLLRGTPGNRKAPSSELPE*RPHQSR Trigger: TCGACTTTGGTGAGGTCGCCACTCAGGAAGCTCTGA...GCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGCTCTTCTGGAGAAACTaGCTGGACCACTGGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSLLRGTPGNRKAPSRLFWRN*LDHWGR Trigger: TCTACCCCAGTGGTCCAGCCAGTTTCTCCAGAAGAG...CCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | TACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGGCTGAGGCCTGGAGGCGCAGGCCCTGGTaGGAACCTCTCTGGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: YNSSQLVTTVMLYQAEAWRRRPW*EPLWAS Trigger: ACTTGCCCAGAGAGGTTCTCACCAGGGCCTGCGCCT...CCAGGCCTCAGCCTGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR GCA 90 bp | ACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGGCAGTCAAAGATCCCTaGCATTGTCAGCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TLKESPETEKSLLRGTPGAVKDP*HCQQPP Trigger: TGGAGGCTGCTGACAATGGCAGGGATCTTTGACTGC...CCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | GAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCGGAATTGTTCACCACTaGAGAAACTGGATGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: EEPPSWNTREQESSQQGGGIVHH*RNWMEG Trigger: ACCTTCCATCCAGTTTCTCCAGTGGTGAACAATTCC...GCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | AAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCACTGATGCATCCTTTTTaGGTGAGTCAGGGACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KSLLRGTPGNRKAPSREALMHPF*VSQGLP Trigger: AGGAAGTCCCTGACTCACCCAAAAAGGATGCATCAG...TGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGTCCCCAGAGGAACCTTaGATGACTGCTTCTCCATTA | + |
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Preference number: 4 (lower is better) Translates to: TEKSLLRGTPGNRKAPSRSPEEP*MTASPL Trigger: TAATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGA...CCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGCTGATGCATCCTTTTTaGGTGAGTCAGGGACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TEKSLLRGTPGNRKAPSRLMHPF*VSQGLP Trigger: AGGAAGTCCCTGACTCACCCAAAAAGGATGCATCAG...CCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | GGTAGTGTTGAACTGCAGCTTAGAAGGATCACTTTCTTTGAACCAAGATGGGACACCTCTCTGGGCAAGTaGCAGGACGTTCGCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: GSVELQLRRITFFEPRWDTSLGK*QDVRPH Trigger: GTGCGGGCGAACGTCCTGTCACTTGCCCAGAGAGGT...GTCCCATCTTGGTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| CDS-3UTR CCA 90 bp | GCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCAGAAAACTGCTTCTCCATTATaGTATCACTACGACAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: ASFVEHQGTGKLPAGRQKTASPL*YHYDSW Trigger: CCAACTGTCGTAGTGATACCATAATGGAGAAGCAGT...TTTCTGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGCACCACTGGAGAAACTaGATGGAAGGTGATATTGTC | + |
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Preference number: 4 (lower is better) Translates to: TEKSLLRGTPGNRKAPSRHHWRN*MEGDIV Trigger: GACAATATCACCTTCCATCCAGTTTCTCCAGTGGTG...CCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | GAGACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCTCTTTTAGCAGGCAATaGGCTCTTCTGGAGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: ETEKSLLRGTPGNRKAPSSFSRQ*ALLEKL Trigger: CAGTTTCTCCAGAAGAGCCCATTGCCTGCTAAAAGA...GCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | TCCATTATGGTATCACTACGACAGTTGGTAGTGTTGAACTGCAGCTTAGAAGGAAGGCGCAGGCCCTGGTaGGAACCTCTCTGGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SIMVSLRQLVVLNCSLEGRRRPW*EPLWAS Trigger: ACTTGCCCAGAGAGGTTCTCACCAGGGCCTGCGCCT...TCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAGTGATACCATAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| CDS-3UTR TCA 90 bp | AAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCATTTGAGGAAAATAGATaGAGTATGGTTGCCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KSLLRGTPGNRKAPSREAFEENR*SMVASG Trigger: ACCAGAGGCAACCATACTTCATCTATTTTCCTCAAA...TGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | AGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGACTGGAGAAACTGGATaGAAGGTGATATTGTCTATG | + |
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Preference number: 4 (lower is better) Translates to: RRASFVEHQGTGKLPAGRTGETG*KVILSM Trigger: CATAGACAATATCACCTTCCATCCAGTTTCTCCAGT...CCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | AAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCAACTGGAGAAACTGGATaGAAGGTGATATTGTCTATG | + |
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Preference number: 4 (lower is better) Translates to: KSLLRGTPGNRKAPSREATGETG*KVILSM Trigger: CATAGACAATATCACCTTCCATCCAGTTTCTCCAGT...TGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | ACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGGGAATTGTTCACCACTaGAGAAACTGGATGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TLKESPETEKSLLRGTPGGIVHH*RNWMEG Trigger: ACCTTCCATCCAGTTTCTCCAGTGGTGAACAATTCC...CCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | GAGACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCTTTGAGGAAAATAGATaGAGTATGGTTGCCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ETEKSLLRGTPGNRKAPSFEENR*SMVASG Trigger: ACCAGAGGCAACCATACTTCATCTATTTTCCTCAAA...GCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | TCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAATCTCAAAGTGCAGTCTaGAGAGCAGCACGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SADIGPPHSQVKGYNSSQSQSAV*RAARGC Trigger: GCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGA...TTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR GCA 90 bp | CCATGTTCTTTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTGTATGGCAGGCATCCTaGTGTGGATGTCACTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PCSFRSADIGPPHSQVKGVWQAS*CGCHSN Trigger: GTTTGAGTGACATCCACAGCAGGATGCCTGCCATAC...ACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAAAGAACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | CTACGACAGTTGGTAGTGTTGAACTGCAGCTTAGAAGGATCACTTTCTTTGAACTCTCAAAGTGCAGTCTaGAGAGCAGCACGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRQLVVLNCSLEGSLSLNSQSAV*RAARGC Trigger: GCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGA...GTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| CDS-3UTR CCA 90 bp | AGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTGCAGGCATCCTGCTGTaGATGTCACTCAAACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RSADIGPPHSQVKGYNSSAGILL*MSLKPL Trigger: CAGAGGTTTGAGTGACATCCACAGCAGGATGCCTGC...ACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR TCA 90 bp | TTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCCACTGCATCATCCTTTaGCTGCTGCCATTTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: FRSADIGPPHSQVKGYNSHCIIL*LLPFAL Trigger: CAAGGCAAATGGCAGCAGTCAAAGGATGATGCAGTG...GGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR GCA 90 bp | CCATGTTCTTTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTTGACTGCTGCCATTTaGCTTGGGCTCCTTCTTAAC | + |
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Preference number: 4 (lower is better) Translates to: PCSFRSADIGPPHSQVKGLTAAI*LGLLLN Trigger: GTTAAGAAGGAGCCCAAGGCAAATGGCAGCAGTCAA...ACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAAAGAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | AGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCTTCTCCATCTAGTATaGCAGGCATCCTGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RSADIGPPHSQVKGYNSSLLHLV*QASCCG Trigger: TCCACAGCAGGATGCCTGCCATACTAGATGGAGAAG...ACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CCA 90 bp | TTAACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCCTTCGTGGAACACCACAAAGTCGAGCCATTTaGAGACTGCTTCTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLKESPETEKSLLRGTPQSRAI*RLLLLH Trigger: ATGGAGAAGAAGCAGTCTCCAAATGGCTCGACTTTG...TGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACTCTTCTGGAGAAACTaGCTGGACCACTGGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SADIGPPHSQVKGYNSSQLFWRN*LDHWGR Trigger: TCTACCCCAGTGGTCCAGCCAGTTTCTCCAGAAGAG...TTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR TCA 90 bp | TACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGGCTGAGGCCTGGAAACTGGATGGAAGGTaGTATTGTCTATGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YNSSQLVTTVMLYQAEAWKLDGR*YCLWGG Trigger: TCCACCCCATAGACAATATCACCTTCCATCCAGTTT...CCAGGCCTCAGCCTGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAAGACTTCCTTTTTGGGTaGCTTTGTAGCCAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SADIGPPHSQVKGYNSSQDFLFG*LCSQPL Trigger: CAGTGGCTGGCTACAAAGTCACCCAAAAAGGAAGTC...TTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTTTGACTGCTGCCATTTaGCTTGGGCTCCTTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSADIGPPHSQVKGYNSSLTAAI*LGLLLN Trigger: GTTAAGAAGGAGCCCAAGGCAAATGGCAGCAGTCAA...ACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCATCGCATGGGAATAATTATCCGATCTGATGAGTCTGCATCCTTTAATCCTGTCTTCTCAAAGTaGAGTCTGGAGAGCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KPHRMGIIIRSDESASFNPVFSK*SLESST Trigger: CGTGCTGCTCTCCAGACTGCACTTTGAGAAGACAGG...ATTAAAGGATGCAGACTCATCAGATCGGATAATTATTCCCATGCGATGGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTTCTTTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTCACCACTGGAGAAACTaGATGGAAGGTGATATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCSFRSADIGPPHSQVKGHHWRN*MEGDIV Trigger: GACAATATCACCTTCCATCCAGTTTCTCCAGTGGTG...ACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAAAGAACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| 3UTR CAA 72 bp | GTAGTGTTGAACTGCAGCTTAGAAGGATCACTTTCTTaGAACCAAGATGGGACTAAGCCCCATCGCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVLNCSLEGSLS*NQDGTKPHRMG Trigger: TCCCATGCGATGGGGCTTAGTCCCATCTTGGTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
||
| CDS-3UTR TCA 90 bp | CCATGTTCTTTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTAAGGATCACTTTCTTTaGACCAAGATGGGACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCSFRSADIGPPHSQVKGKDHFL*TKMGLS Trigger: GCTTAGTCCCATCTTGGTTCAAAGAAAGTGATCCTT...ACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAAAGAACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR TCA 90 bp | ATACATTTTAAGACCTTAACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCGACTTCCTTTTTGGGTaGCTTTGTAGCCAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IHFKTLTLKESPETEKSLDFLFG*LCSQPL Trigger: CAGTGGCTGGCTACAAAGTCACCCAAAAAGGAAGTC...GAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGTTAAGGTCTTAAAATGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR GCA 90 bp | TTAACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCCTTCGTGGAACACCATTGGTAGTGTTGAACTaGAGCTTAGAAGGATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLKESPETEKSLLRGTPLVVLN*SLEGSL Trigger: AAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAA...TGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR GCA 90 bp | ATACATTTTAAGACCTTAACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCGTATGGCAGGCATCCTaGTGTGGATGTCACTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHFKTLTLKESPETEKSLVWQAS*CGCHSN Trigger: GTTTGAGTGACATCCACAGCAGGATGCCTGCCATAC...GAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGTTAAGGTCTTAAAATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGGCAATGGGCTCTTCTaGAGAAACTGGCTGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSKRLQFQSTGDNSNAVSGNGLF*RNWLDH Trigger: GTGGTCCAGCCAGTTTCTCCAGAAGAGCCCATTGCC...TGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAAGGATCACTTTCTTTaGACCAAGATGGGACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRSADIGPPHSQVKGYNSKDHFL*TKMGLS Trigger: GCTTAGTCCCATCTTGGTTCAAAGAAAGTGATCCTT...GGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTTCTTTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTGGAACCTTGAATGACTaGTTCTCCATTATGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PCSFRSADIGPPHSQVKGGTLND*FSIMVS Trigger: TGATACCATAATGGAGAAGCAGTCATTCAAGGTTCC...ACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAAAGAACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCACTGCTTCTCCATTATaGTATCACTACGACAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRSADIGPPHSQVKGYNSTASPL*YHYDSW Trigger: CCAACTGTCGTAGTGATACCATAATGGAGAAGCAGT...GGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGGCTGAGAAACTGGATGGAAGGTaGTATTGTCTATGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGYNSSQLVTTVMLYQAEKLDGR*YCLWGG Trigger: TCCACCCCATAGACAATATCACCTTCCATCCAGTTT...CTCAGCCTGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGGCTGAGCAAAGTCGAGCCATTTaGAGACTGCTTCTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGYNSSQLVTTVMLYQAEQSRAI*RLLLLH Trigger: ATGGAGAAGAAGCAGTCTCCAAATGGCTCGACTTTG...CTCAGCCTGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAAATATTGTCTATGGGGTaGATTAGCTTCAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SADIGPPHSQVKGYNSSQILSMG*ISFRAS Trigger: GGAAGCTCTGAAGCTAATCCACCCCATAGACAATAT...TTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCAAGGTTTACCAAACGCAGTTTATTTAGGACAAAATACATTTTAAGACCTGGCAATGGGCTCTTCTaGAGAAACTGGCTGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPRFTKRSLFRTKYILRPGNGLF*RNWLDH Trigger: GTGGTCCAGCCAGTTTCTCCAGAAGAGCCCATTGCC...AGGTCTTAAAATGTATTTTGTCCTAAATAAACTGCGTTTGGTAAACCTTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | CCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATATTGTCTATGGGGTaGATTAGCTTCAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPHSQVKGYNSSQLVTTVILSMG*ISFRAS Trigger: GGAAGCTCTGAAGCTAATCCACCCCATAGACAATAT...TACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| 3UTR CAA 72 bp | AATGACTGCTTCTCCATTATGGTATCACTACGACAGTaGGTAGTGTTGAACTGCAGCTTAGAAGGATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NDCFSIMVSLRQ*VVLNCSLEGSL Trigger: AAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAGTGATACCATAATGGAGAAGCAGTCATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
||
| CDS-3UTR GCA 90 bp | CCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAGGAACCTTGAATGACTaGTTCTCCATTATGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PPHSQVKGYNSSQLVTTVGTLND*FSIMVS Trigger: TGATACCATAATGGAGAAGCAGTCATTCAAGGTTCC...TACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGTCTTTTAGCAGGCAATaGGCTCTTCTGGAGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QVKGYNSSQLVTTVMLYQSFSRQ*ALLEKL Trigger: CAGTTTCTCCAGAAGAGCCCATTGCCTGCTAAAAGA...CTGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| 3UTR CAA 72 bp | TTCTCCATTATGGTATCACTACGACAGTTGGTAGTGTaGAACTGCAGCTTAGAAGGATCACTTTCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSIMVSLRQLVV*NCSLEGSLSLN Trigger: GTTCAAAGAAAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCGTAGTGATACCATAATGGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCATTGGTAGTGTTGAACTaGAGCTTAGAAGGATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PSKRLQFQSTGDNSNAVSLVVLN*SLEGSL Trigger: AAGTGATCCTTCTAAGCTGCAGTTCAACACTACCAA...TGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS GCA 90 bp | GAAGCCCTGTCTTCTCAAAGTGCAGTCTGGAGAGCAGCACGGGGCTaGTGGACTGCGGGCTCTTGTTGTAGGAGGGGCAGTACTTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: EALSSQSAVWRAARG*WTAGSCCRRGSTCR Trigger: CCGACAAGTACTGCCCCTCCTACAACAAGAGCCCGCAGTCCAGCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGAAGACAGGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
||
| CDS GCA 90 bp | AGTCTGCATCCTTCTCAAAGTGCAGTCTGGAGAGCAGCACGGGGCTaGTGGACTGCGGGCTCTTGTTGTAGGAGGGGCAGTACTTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHPSQSAVWRAARG*WTAGSCCRRGSTCR Trigger: CCGACAAGTACTGCCCCTCCTACAACAAGAGCCCGCAGTCCAGCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGAAGGATGCAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGATGGTTGCCTCTGGTTaGTTCCCTGACACCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRASFVEHQGTGKLPAGRMVASG*FPDTAA Trigger: GGCAGCGGTGTCAGGGAACAAACCAGAGGCAACCAT...CCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCACTGCTGCCATTTGCCTaGGGCTCCTTCTTAACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLRGTPGNRKAPSREALLPFA*GSFLTS Trigger: GCTGGTTAAGAAGGAGCCCAAGGCAAATGGCAGCAG...TGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCCCACTGCATCATCCTTaGACTGCTGCCATTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EEPPSWNTREQESSQQGGPLHHP*TAAICL Trigger: AAGGCAAATGGCAGCAGTCAAAGGATGATGCAGTGG...GCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS CCA 90 bp | GGAATCCACAGTGATGATGCTGTAGGAATACAGGCACTCTCCCCCTaGCGCTTCCCAGCAGTCAAAGATCCCTGCCATTGTCAGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GIHSDDAVGIQALSP*RFPAVKDPCHCQQP Trigger: AGGCTGCTGACAATGGCAGGGATCTTTGACTGCTGGGAAGCGCCAGGGGGAGAGTGCCTGTATTCCTACAGCATCATCACTGTGGATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | GAGACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCCAAAGATCCCTGCCATaGTCAGCAGCCTCCAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ETEKSLLRGTPGNRKAPSQRSLP*SAASSC Trigger: ACAACTGGAGGCTGCTGACAATGGCAGGGATCTTTG...GCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGTCAGGGACTTCCTTTTaGGGTGACTTTGTAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRASFVEHQGTGKLPAGRSGTSF*GDFVAS Trigger: GCTGGCTACAAAGTCACCCAAAAAGGAAGTCCCTGA...CCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGCAGAAACGACAGTTGGTAGTGTaGAACTGCAGCTTAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASFVEHQGTGKLPAGRQKRQLVV*NCSLEG Trigger: TCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCG...TTTCTGCCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGGAGGGTATCACTACGACAGTaGGTAGTGTTGAACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRASFVEHQGTGKLPAGRVSLRQ*VVLNCS Trigger: GCTGCAGTTCAACACTACCAACTGTCGTAGTGATAC...CCTCCCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS CCA 90 bp | GCTTCAGAGCTTCCTGAGTGGCGACCTCACCAAAGTCGAGCCATTTaGAGACTGCTTCTTCTCCATCTAGTATGGCAGGCATCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASELPEWRPHQSRAI*RLLLLHLVWQASCC Trigger: ACAGCAGGATGCCTGCCATACTAGATGGAGAAGAAGCAGTCTCCAAATGGCTCGACTTTGGTGAGGTCGCCACTCAGGAAGCTCTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS CCA 90 bp | AGGAAGCTGCTGGTAGCACCTCTTTTAGCAGGCAATGGGCTCTTCTaGAGAAACTGGCTGGACCACTGGGGTAGACCTGATGCATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RKLLVAPLLAGNGLF*RNWLDHWGRPDASF Trigger: AAAGGATGCATCAGGTCTACCCCAGTGGTCCAGCCAGTTTCTCCAGAAGAGCCCATTGCCTGCTAAAAGAGGTGCTACCAGCAGCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGAACAGGAAAGCTCCCAGCAGGTTCCCCAGAGGAACCTaGAATGACTGCTTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TEKSLLRGTPGNRKAPSRFPRGT*NDCFSI Trigger: AATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGAA...CCTGCTGGGAGCTTTCCTGTTCCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCCTTCGTGGAACACCAGGGCGACAGTTGGTAGTGTaGAACTGCAGCTTAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TLKESPETEKSLLRGTPGRQLVV*NCSLEG Trigger: TCCTTCTAAGCTGCAGTTCAACACTACCAACTGTCG...CCCTGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | CCATGTTCTTTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTATGGTTGCCTCTGGTTaGTTCCCTGACACCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PCSFRSADIGPPHSQVKGMVASG*FPDTAA Trigger: GGCAGCGGTGTCAGGGAACAAACCAGAGGCAACCAT...ACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAAAGAACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS-3UTR CAA 90 bp | TTAACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCCTTCGTGGAACACCACAAAGATCCCTGCCATaGTCAGCAGCCTCCAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTLKESPETEKSLLRGTPQRSLP*SAASSC Trigger: ACAACTGGAGGCTGCTGACAATGGCAGGGATCTTTG...TGGTGTTCCACGAAGGAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS TCA 90 bp | TGGAAGGTGATATTGTCTATGGGGTGGATTAGCTTCAGAGCTTCCTaGGTGGCGACCTCACCAAAGTCGAGCCATTTGGAGACTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WKVILSMGWISFRAS*VATSPKSSHLETAS Trigger: AGAAGCAGTCTCCAAATGGCTCGACTTTGGTGAGGTCGCCACTCAGGAAGCTCTGAAGCTAATCCACCCCATAGACAATATCACCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS TCA 90 bp | ACTTCCTTTTTGGGTGACTTTGTAGCCAGCCACTGCATCATCCTTTaGCTGCTGCCATTTGCCTTGGGCTCCTTCTTAACCAGCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSFLGDFVASHCIIL*LLPFALGSFLTSKS Trigger: TGACTTGCTGGTTAAGAAGGAGCCCAAGGCAAATGGCAGCAGTCAAAGGATGATGCAGTGGCTGGCTACAAAGTCACCCAAAAAGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
||
| CDS CCA 90 bp | TCCGGAGTGTTGTTTCGGGAATTGTTCACCACTGGAGAAACTGGATaGAAGGTGATATTGTCTATGGGGTGGATTAGCTTCAGAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVLFRELFTTGETG*KVILSMGWISFRAS Trigger: GGAAGCTCTGAAGCTAATCCACCCCATAGACAATATCACCTTCCATCCAGTTTCTCCAGTGGTGAACAATTCCCGAAACAACACTCCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCCCACTGCATCATCCTTaGACTGCTGCCATTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: FRSADIGPPHSQVKGYNSPLHHP*TAAICL Trigger: AAGGCAAATGGCAGCAGTCAAAGGATGATGCAGTGG...GGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS TCA 90 bp | TGTTGTTTCGGGAATTGTTCACCACTGGAGAAACTGGATGGAAGGTaGTATTGTCTATGGGGTGGATTAGCTTCAGAGCTTCCTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: CCFGNCSPLEKLDGR*YCLWGGLASELPEW Trigger: CCACTCAGGAAGCTCTGAAGCTAATCCACCCCATAGACAATATCACCTTCCATCCAGTTTCTCCAGTGGTGAACAATTCCCGAAACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS GCA 90 bp | AAAACAACACACCGCCGTCCTTTCCCCAGAGGAACCTTGAATGACTaGTTCTCCATTATGGTATCACTACGACAGTTGGTAGTGTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: KTTHRRPFPRGTLND*FSIMVSLRQLVVLN Trigger: GTTCAACACTACCAACTGTCGTAGTGATACCATAATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGAAAGGACGGCGGTGTGTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCTTCCCCAGAGGAACCTaGAATGACTGCTTCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: FRSADIGPPHSQVKGYNSFPRGT*NDCFSI Trigger: AATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGAA...GGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | AGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTTCCCAGACCTTTTCCTaGTTGTCAGAGCTGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: RSADIGPPHSQVKGYNSSSQTFS*LSELSE Trigger: TTCAGACAGCTCTGACAACAAGGAAAAGGTCTGGGA...ACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | AGGTCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTGGATGGAAGGTGATATaGTCTATGGGGTGGATTAGC | + |
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Preference number: 5 (lower is better) Translates to: RSADIGPPHSQVKGYNSSGWKVI*SMGWIS Trigger: GCTAATCCACCCCATAGACAATATCACCTTCCATCC...ACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACAGACCTTTTCCTTGTaGTCAGAGCTGTCTGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SADIGPPHSQVKGYNSSQQTFSL*SELSEA Trigger: TGCTTCAGACAGCTCTGACAACAAGGAAAAGGTCTG...TTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | ACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTCTGCTGCCATTTGCCTaGGGCTCCTTCTTAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: TFPSKRLQFQSTGDNSNALLPFA*GSFLTS Trigger: GCTGGTTAAGAAGGAGCCCAAGGCAAATGGCAGCAG...AGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGGGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | ATACATTTTAAGACCTTAACTCTAAAGGAGAGCCCAGAGACTGAGAAGAGCCTCTCAGGGACTTCCTTTTaGGGTGACTTTGTAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IHFKTLTLKESPETEKSLSGTSF*GDFVAS Trigger: GCTGGCTACAAAGTCACCCAAAAAGGAAGTCCCTGA...GAGGCTCTTCTCAGTCTCTGGGCTCTCCTTTAGAGTTAAGGTCTTAAAATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | CCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTATCCCAGACCTTTTCCTaGTTGTCAGAGCTGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPHSQVKGYNSSQLVTTVSQTFS*LSELSE Trigger: TTCAGACAGCTCTGACAACAAGGAAAAGGTCTGGGA...TACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | AAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGGCTGAGGGATGGAAGGTGATATaGTCTATGGGGTGGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGYNSSQLVTTVMLYQAEGWKVI*SMGWIS Trigger: GCTAATCCACCCCATAGACAATATCACCTTCCATCC...CTCAGCCTGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTGACATTGGGCCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAAGAAGGATCACTTTCTTaGAACCAAGATGGGACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SADIGPPHSQVKGYNSSQEGSLS*NQDGTK Trigger: CTTAGTCCCATCTTGGTTCAAAGAAAGTGATCCTTC...TTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGGCCCAATGTCAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | CCACCACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAGTGTTGTTTCGGGAATaGTTCACCACTGGAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PPHSQVKGYNSSQLVTTVVLFRE*FTTGET Trigger: AGTTTCTCCAGTGGTGAACAATTCCCGAAACAACAC...TACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGGGAATGTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | CAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTATCAGCAGACCTTTTCCTTGTaGTCAGAGCTGTCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QVKGYNSSQLVTTVMLYQQTFSL*SELSEA Trigger: TGCTTCAGACAGCTCTGACAACAAGGAAAAGGTCTG...CTGATACAGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | ACATTCCCAAGTAAAAGGTTACAATTCCAGTCAACTGGTGACAACAGTAATGCTGTGTTGTTTCGGGAATaGTTCACCACTGGAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: TFPSKRLQFQSTGDNSNAVLFRE*FTTGET Trigger: AGTTTCTCCAGTGGTGAACAATTCCCGAAACAACAC...AGCATTACTGTTGTCACCAGTTGACTGGAATTGTAACCTTTTACTTGGGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS-3UTR CAA 90 bp | CAGCCAAGGTTTACCAAACGCAGTTTATTTAGGACAAAATACATTTTAAGACCTGAAGGATCACTTTCTTaGAACCAAGATGGGACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPRFTKRSLFRTKYILRPEGSLS*NQDGTK Trigger: CTTAGTCCCATCTTGGTTCAAAGAAAGTGATCCTTC...AGGTCTTAAAATGTATTTTGTCCTAAATAAACTGCGTTTGGTAAACCTTGGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS TCA 72 bp | GCCGGCCCTGCCGATCCTGATAGGCGCAGGCCCTGGTaGGAACCTCTCTGGGCAAGTGACAGGACGTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGPADPDRRRPW*EPLWASDRTFA Trigger: GGCGAACGTCCTGTCACTTGCCCAGAGAGGTTCTCACCAGGGCCTGCGCCTATCAGGATCGGCAGGGCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 ENSMUST00000204232.2 |
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| CDS GCA 72 bp | CCTTCTCAAAGTGCAGTCTGGAGAGCAGCACGGGGCTaGTGGACTGCGGGCTCTTGTTGTAGGAGGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSQSAVWRAARG*WTAGSCCRRGS Trigger: ACTGCCCCTCCTACAACAAGAGCCCGCAGTCCAGCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS GCA 72 bp | TCTTCTCAAAGTGCAGTCTGGAGAGCAGCACGGGGCTaGTGGACTGCGGGCTCTTGTTGTAGGAGGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSQSAVWRAARG*WTAGSCCRRGS Trigger: ACTGCCCCTCCTACAACAAGAGCCCGCAGTCCAGCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| CDS CCA 72 bp | TCTCAAAGTGCAGTCTGGAGAGCAGCACGGGGCTGCTaGACTGCGGGCTCTTGTTGTAGGAGGGGCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: SQSAVWRAARGC*TAGSCCRRGST Trigger: AGTACTGCCCCTCCTACAACAAGAGCCCGCAGTCCAGCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 ENSMUST00000204232.2 |
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| CDS CCA 72 bp | ACACACAGAGAAGCCCTGTCTTCTCAAAGTGCAGTCTaGAGAGCAGCACGGGGCTGCTGGACTGCGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: THREALSSQSAV*RAARGCWTAGS Trigger: AGAGCCCGCAGTCCAGCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGAAGACAGGGCTTCTCTGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204232.2 |
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| CDS CCA 72 bp | GATCTGATGAGTCTGCATCCTTCTCAAAGTGCAGTCTaGAGAGCAGCACGGGGCTGCTGGACTGCGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: DLMSLHPSQSAV*RAARGCWTAGS Trigger: AGAGCCCGCAGTCCAGCAGCCCCGTGCTGCTCTCCAGACTGCACTTTGAGAAGGATGCAGACTCATCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CCA 72 bp | CAGGAAGCTGCTGGTAGCACCTCTTTTAGCAGGCAATaGGCTCTTCTGGAGAAACTGGCTGGACCACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QEAAGSTSFSRQ*ALLEKLAGPLG Trigger: CCCCAGTGGTCCAGCCAGTTTCTCCAGAAGAGCCCATTGCCTGCTAAAAGAGGTGCTACCAGCAGCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CCA 72 bp | AGTGATGATGCTGTAGGAATACAGGCACTCTCCCCCTaGCGCTTCCCAGCAGTCAAAGATCCCTGCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: SDDAVGIQALSP*RFPAVKDPCHC Trigger: ACAATGGCAGGGATCTTTGACTGCTGGGAAGCGCCAGGGGGAGAGTGCCTGTATTCCTACAGCATCATCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CCA 72 bp | GGCAATGGGCTCTTCTGGAGAAACTGGCTGGACCACTaGGGTAGACCTGATGCATCCTTTTTGGGTGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GNGLFWRNWLDH*GRPDASFLGES Trigger: TGACTCACCCAAAAAGGATGCATCAGGTCTACCCCAGTGGTCCAGCCAGTTTCTCCAGAAGAGCCCATTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CAA 72 bp | ACCAGCAAGTCAGCAGGCGCCAGACACTCCGGAGTGTaGTTTCGGGAATTGTTCACCACTGGAGAAACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSKSAGARHSGV*FRELFTTGETG Trigger: TCCAGTTTCTCCAGTGGTGAACAATTCCCGAAACAACACTCCGGAGTGTCTGGCGCCTGCTGACTTGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CAA 90 bp | GCTTCCCAGCAGTCAAAGATCCCTGCCATTGTCAGCAGCCTCCAGTaGTCCCAGACCTTTTCCTTGTTGTCAGAGCTGTCTGAAGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: ASQQSKIPAIVSSLQ*SQTFSLLSELSEAS Trigger: CGATGCTTCAGACAGCTCTGACAACAAGGAAAAGGTCTGGGACAACTGGAGGCTGCTGACAATGGCAGGGATCTTTGACTGCTGGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CCA 72 bp | CTTCCTGAGTGGCGACCTCACCAAAGTCGAGCCATTTaGAGACTGCTTCTTCTCCATCTAGTATGGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPEWRPHQSRAI*RLLLLHLVWQA Trigger: TGCCTGCCATACTAGATGGAGAAGAAGCAGTCTCCAAATGGCTCGACTTTGGTGAGGTCGCCACTCAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CCA 72 bp | TGTCTATGGGGTGGATTAGCTTCAGAGCTTCCTGAGTaGCGACCTCACCAAAGTCGAGCCATTTGGAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: CLWGGLASELPE*RPHQSRAIWRL Trigger: CAGTCTCCAAATGGCTCGACTTTGGTGAGGTCGCCACTCAGGAAGCTCTGAAGCTAATCCACCCCATAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CCA 72 bp | CCTCTTTTAGCAGGCAATGGGCTCTTCTGGAGAAACTaGCTGGACCACTGGGGTAGACCTGATGCATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLLAGNGLFWRN*LDHWGRPDASF Trigger: AAAGGATGCATCAGGTCTACCCCAGTGGTCCAGCCAGTTTCTCCAGAAGAGCCCATTGCCTGCTAAAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CAA 72 bp | GCAGGCGCCAGACACTCCGGAGTGTTGTTTCGGGAATaGTTCACCACTGGAGAAACTGGATGGAAGGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: AGARHSGVLFRE*FTTGETGWKVI Trigger: TATCACCTTCCATCCAGTTTCTCCAGTGGTGAACAATTCCCGAAACAACACTCCGGAGTGTCTGGCGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CAA 90 bp | TCCTTCTTAACCAGCAAGTCAGCAGGCGCCAGACACTCCGGAGTGTaGTTTCGGGAATTGTTCACCACTGGAGAAACTGGATGGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFLTSKSAGARHSGV*FRELFTTGETGWKV Trigger: CACCTTCCATCCAGTTTCTCCAGTGGTGAACAATTCCCGAAACAACACTCCGGAGTGTCTGGCGCCTGCTGACTTGCTGGTTAAGAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CCA 72 bp | CGAGCCATTTGGAGACTGCTTCTTCTCCATCTAGTATaGCAGGCATCCTGCTGTGGATGTCACTCAAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: RAIWRLLLLHLV*QASCCGCHSNL Trigger: GAGGTTTGAGTGACATCCACAGCAGGATGCCTGCCATACTAGATGGAGAAGAAGCAGTCTCCAAATGGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS TCA 72 bp | ATATTGTCTATGGGGTGGATTAGCTTCAGAGCTTCCTaGGTGGCGACCTCACCAAAGTCGAGCCATTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILSMGWISFRAS*VATSPKSSHLE Trigger: CTCCAAATGGCTCGACTTTGGTGAGGTCGCCACTCAGGAAGCTCTGAAGCTAATCCACCCCATAGACAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS TCA 72 bp | AACACACCGCCGTCCTTTCCCCAGAGGAACCTTGAATaGCTGCTTCTCCATTATGGTATCACTACGACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: NTPPSFPQRNLE*LLLHYGITTTV Trigger: AACTGTCGTAGTGATACCATAATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGAAAGGACGGCGGTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CAA 72 bp | GATGCATCCTTTTTGGGTGAGTCAGGGACTTCCTTTTaGGGTGACTTTGTAGCCAGCCACTGCATCATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DASFLGESGTSF*GDFVASHCIIL Trigger: AAGGATGATGCAGTGGCTGGCTACAAAGTCACCCAAAAAGGAAGTCCCTGACTCACCCAAAAAGGATGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS CAA 72 bp | AAAACAACACACCGCCGTCCTTTCCCCAGAGGAACCTaGAATGACTGCTTCTCCATTATGGTATCACTACGA | + |
|
Preference number: 6 (lower is better) Translates to: KTTHRRPFPRGT*NDCFSIMVSLR Trigger: TCGTAGTGATACCATAATGGAGAAGCAGTCATTCAAGGTTCCTCTGGGGAAAGGACGGCGGTGTGTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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| CDS TCA 72 bp | GGGAATTGTTCACCACTGGAGAAACTGGATGGAAGGTaGTATTGTCTATGGGGTGGATTAGCTTCAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GNCSPLEKLDGR*YCLWGGLASEL Trigger: AAGCTCTGAAGCTAATCCACCCCATAGACAATATCACCTTCCATCCAGTTTCTCCAGTGGTGAACAATTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032141.14 ENSMUST00000113606.2 |
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