Pregenerated sensors for HLF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003949Ensembl transcript IDs: ENSMUST00000004051.8, ENSMUST00000176001.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTATGTACCCAGGGAGGGAGGGCATCACACCTCAGCCTAGTCAGCTaGAGGAAGCCAATCCCAGCCGGTGGGGACAAGCCACACACAGAG | + |
|
Preference number: 1 (lower is better) Translates to: VCTQGGRASHLSLVS*RKPIPAGGDKPHTE Trigger: CTCTGTGTGTGGCTTGTCCCCACCGGCTGGGATTGGCTTCCTGCAGCTGACTAGGCTGAGGTGTGATGCCCTCCCTCCCTGGGTACATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 90 bp | GCTTCCCCAGAGGGTTGTACTCAGGAGCCCTCAGTAGGAAGCAAGTaGAATCAGAGCCAGAGAAGAAGGTATGTACCCAGGGAGGGAGGG | + |
|
Preference number: 1 (lower is better) Translates to: ASPEGCTQEPSVGSK*NQSQRRRYVPREGG Trigger: CCCTCCCTCCCTGGGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCCTGAGTACAACCCTCTGGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | AATGGAGAAAGTGAATGGGCTAGAAAAGTGGGAATGGGCTGGGTGTaGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAGGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: NGESEWARKVGMGWV*EGETHDEAHRGKGF Trigger: GAAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTTCTAGCCCATTCACTTTCTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | GAGGGAAATGGAGAAAGTGAATGGGCTAGAAAAGTGGGAATGGGCTaGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: EGNGESEWARKVGMG*VWEGETHDEAHRGK Trigger: TTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTTCTAGCCCATTCACTTTCTCCATTTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 90 bp | GTACTGGATGGTTCCATGTGTCTGGGTGGGCCACAGTGCAACCCTTaGACACTTCTCTCCTTAAGTACTCATCTGTGCCCTGGCAAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: VLDGSMCLGGPQCNP*TLLSLSTHLCPGKH Trigger: GTGCTTGCCAGGGCACAGATGAGTACTTAAGGAGAGAAGTGTTCAAGGGTTGCACTGTGGCCCACCCAGACACATGGAACCATCCAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | TTGAATATCAAGAGGGAAATGGAGAAAGTGAATGGGCTAGAAAAGTaGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: LNIKREMEKVNGLEK*EWAGCGKGRRTTKH Trigger: GTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTTCTAGCCCATTCACTTTCTCCATTTCCCTCTTGATATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | AATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTaGCAAAGGCTTCTCCAAGATGCATTATTATTATGTTTTTGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: NGLGVGRGDARRSTP*QRLLQDALLLCFWH Trigger: ATGCCAAAAACATAATAATAATGCATCTTGGAGAAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | AATTCCAAGAAAGGCCAGGCATGCTTTTCTTCATCGAGTACTGGATaGTTCCATGTGTCTGGGTGGGCCACAGTGCAACCCTTGAACACT | + |
|
Preference number: 1 (lower is better) Translates to: NSKKGQACFSSSSTG*FHVSGWATVQPLNT Trigger: AGTGTTCAAGGGTTGCACTGTGGCCCACCCAGACACATGGAACCATCCAGTACTCGATGAAGAAAAGCATGCCTGGCCTTTCTTGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 90 bp | CCTTCAAGGCCTGTTCTATTTAGAGACAAAGGCCTGGCCAAGTCATaGCTGATGTGGTTTGTGAATGACCCAAAGCACCAGTCCCTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: PSRPVLFRDKGLAKS*LMWFVNDPKHQSLY Trigger: ATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAGGCATGACTTGGCCAGGCCTTTGTCTCTAAATAGAACAGGCCTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | GAGATAGATACACAGGCCGAAAGCGAACAAAATCATCTGGGGCTCTaGCAGCCATACTCCATTCCAACGACTCAGAATCCTGAAGTGAAC | + |
|
Preference number: 1 (lower is better) Translates to: EIDTQAESEQNHLGL*QPYSIPTTQNPEVN Trigger: GTTCACTTCAGGATTCTGAGTCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGGCCTGTGTATCTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | AAACAATTCCAAGAAAGGCCAGGCATGCTTTTCTTCATCGAGTACTaGATGGTTCCATGTGTCTGGGTGGGCCACAGTGCAACCCTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: KQFQERPGMLFFIEY*MVPCVWVGHSATLE Trigger: TTCAAGGGTTGCACTGTGGCCCACCCAGACACATGGAACCATCCAGTACTCGATGAAGAAAAGCATGCCTGGCCTTTCTTGGAATTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | CCTGTTCTATTTAGAGACAAAGGCCTGGCCAAGTCATGCCTGATGTaGTTTGTGAATGACCCAAAGCACCAGTCCCTCTATAGTTGGGGA | + |
|
Preference number: 1 (lower is better) Translates to: PVLFRDKGLAKSCLM*FVNDPKHQSLYSWG Trigger: TCCCCAACTATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAGGCATGACTTGGCCAGGCCTTTGTCTCTAAATAGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 90 bp | AGAAAGAGCCTCTGGGTTCTTTTATCTGGTTTCCCCCTCACCCAGTaGCTGAGTCCCATCATGCTATTCTCAAACATAGGCCCATTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: RKSLWVLLSGFPLTQ*LSPIMLFSNIGPFF Trigger: GAAGAATGGGCCTATGTTTGAGAATAGCATGATGGGACTCAGTCACTGGGTGAGGGGGAAACCAGATAAAAGAACCCAGAGGCTCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | TATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGGGTGTaGGGCTACCAGACAGGAAACAAGCTGTCCATCTATTCAAAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: YASGKVLMSERLVWV*GYQTGNKLSIYSKA Trigger: GGCTTTTGAATAGATGGACAGCTTGTTTCCTGTCTGGTAGCCCCACACCCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | TGCGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTaGGTGTGGGGCTACCAGACAGGAAACAAGCTGTCCATCTATTCA | + |
|
Preference number: 1 (lower is better) Translates to: CVYASGKVLMSERLV*VWGYQTGNKLSIYS Trigger: TGAATAGATGGACAGCTTGTTTCCTGTCTGGTAGCCCCACACCCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 90 bp | ACACCAAAATATGAGTCAGTTGCGTTTATGCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTTGGGTGTGGGGCTACCAGACAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: TPKYESVAFMPLVKC*CQKGWFGCGATRQE Trigger: TTCCTGTCTGGTAGCCCCACACCCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACGCAACTGACTCATATTTTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 90 bp | AACCCCTCATTCTTAGGCCTTCCCTTGCCCTCTGCTTCCCTGTCCTaGGAATATTCTGGTCATGCACAAATGCATTACTTGATTTTTGAG | + |
|
Preference number: 1 (lower is better) Translates to: NPSFLGLPLPSASLS*EYSGHAQMHYLIFE Trigger: CTCAAAAATCAAGTAATGCATTTGTGCATGACCAGAATATTCTCAGGACAGGGAAGCAGAGGGCAAGGGAAGGCCTAAGAATGAGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 90 bp | CTTCTCTCCTTAAGTACTCATCTGTGCCCTGGCAAGCACTGTCATTaGACAGTTCTGCAATCCCTCTCTTTCTCTATCTTCAAAAGGACC | + |
|
Preference number: 1 (lower is better) Translates to: LLSLSTHLCPGKHCH*TVLQSLSFSIFKRT Trigger: GGTCCTTTTGAAGATAGAGAAAGAGAGGGATTGCAGAACTGTTCAATGACAGTGCTTGCCAGGGCACAGATGAGTACTTAAGGAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | CGCAGTGCTAGGGTATGCTATGCACCTTTCCAGCATGGTAATTCATaGCTGAAACAGAAACAAGAGCTTATGGTCTTGATCACTGAGATC | + |
|
Preference number: 1 (lower is better) Translates to: RSARVCYAPFQHGNS*LKQKQELMVLITEI Trigger: GATCTCAGTGATCAAGACCATAAGCTCTTGTTTCTGTTTCAGCCATGAATTACCATGCTGGAAAGGTGCATAGCATACCCTAGCACTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | ATGCTATTCTCAAACATAGGCCCATTCTTCTTCTTCTACAAAGGATaGTCCCTTCAAGGCCTGTTCTATTTAGAGACAAAGGCCTGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: MLFSNIGPFFFFYKG*SLQGLFYLETKAWP Trigger: TGGCCAGGCCTTTGTCTCTAAATAGAACAGGCCTTGAAGGGACCATCCTTTGTAGAAGAAGAAGAATGGGCCTATGTTTGAGAATAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | CTTGCAAAATGTATTTTATTTCTCTCACTCTCTCATCTCTCACCGTaGAATACAACAGGAACCTGGGAAGAAACCTACAGGTCTCGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: LAKCILFLSLSHLSP*NTTGTWEETYRSRF Trigger: AAAACGAGACCTGTAGGTTTCTTCCCAGGTTCCTGTTGTATTCCACGGTGAGAGATGAGAGAGTGAGAGAAATAAAATACATTTTGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | CTAATGAAAAGATATGACCTGACCAGGAAGTGCTTTGCATCTGAATaGCAGGGCATGCAACATTTCAGATGCATTTGGAATGACCAAATA | + |
|
Preference number: 1 (lower is better) Translates to: LMKRYDLTRKCFASE*QGMQHFRCIWNDQI Trigger: TATTTGGTCATTCCAAATGCATCTGAAATGTTGCATGCCCTGCCATTCAGATGCAAAGCACTTCCTGGTCAGGTCATATCTTTTCATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | TGCTTTGCATCTGAATGGCAGGGCATGCAACATTTCAGATGCATTTaGAATGACCAAATAATTAACCATGGAAAGATGCCTACCTTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: CFASEWQGMQHFRCI*NDQIINHGKMPTLK Trigger: TTTCAAGGTAGGCATCTTTCCATGGTTAATTATTTGGTCATTCCAAATGCATCTGAAATGTTGCATGCCCTGCCATTCAGATGCAAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 90 bp | ACCAGCAATATCATGGTATACAATTACACTAACCTCTTGTTAACTTaGGCCTGTTTGACAGATGCAATCTTTGTGGTGTTGTCGAAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: TSNIMVYNYTNLLLT*ACLTDAIFVVLSKG Trigger: TCCTTTCGACAACACCACAAAGATTGCATCTGTCAAACAGGCTCAAGTTAACAAGAGGTTAGTGTAATTGTATACCATGATATTGCTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 90 bp | CCTCTCTTTCTCTATCTTCAAAAGGACCAACTTTTTGGTGTCCCATaGCTATTACTGAATTATCTCTTATTCAGTTCTATACAACATGGT | + |
|
Preference number: 1 (lower is better) Translates to: PLFLYLQKDQLFGVP*LLLNYLLFSSIQHG Trigger: ACCATGTTGTATAGAACTGAATAAGAGATAATTCAGTAATAGCCATGGGACACCAAAAAGTTGGTCCTTTTGAAGATAGAGAAAGAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAAGGTTGGTTTGGGTGTaGGGCTACCAGACAGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GMGWVWEGETHDEAHRGKRLVWV*GYQTGN Trigger: GTTTCCTGTCTGGTAGCCCCACACCCAAACCAACCT...TTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCCTAGAAAAGTGGGAATaGGCTGGGTGTGGGAAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GALSRKQVQSEPEKKVCTLEKWE*AGCGKG Trigger: CCCCTTCCCACACCCAGCCCATTCCCACTTTTCTAG...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CAA 90 bp | AGTACTGGATGGTTCCATGTGTCTGGGTGGGCCACAGTGCAACCCTaGAACACTTCTCTCCTTAAGTACTCATCTGTGCCCTGGCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: STGWFHVSGWATVQP*NTSLLKYSSVPWQA Trigger: TGCTTGCCAGGGCACAGATGAGTACTTAAGGAGAGAAGTGTTCAAGGGTTGCACTGTGGCCCACCCAGACACATGGAACCATCCAGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTTTAGGTACAGACAGTaGAAAACACACTCTGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: KSGNGLGVGRGDARRSTPFRYRQ*KTHSVF Trigger: GAACACAGAGTGTGTTTTGCACTGTCTGTACCTAAA...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCAAGTCAGCCTGGGGGTaGGGGACTGATAATTACCTA | + |
|
Preference number: 2 (lower is better) Translates to: GALSRKQVQSEPEKKVCTKSAWG*GTDNYL Trigger: TAGGTAATTATCAGTCCCCCACCCCCAGGCTGACTT...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATGTGGTTTGTGAATGACCCAAAGCACCAGTCCCTCTATAGTTGGGGACTGAAGCAACACAGACCCTaGCCAAGTGAGATCGCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LMWFVNDPKHQSLYSWGLKQHRP*PSEIAR Trigger: TCTAGCGATCTCACTTGGCCAGGGTCTGTGTTGCTT...CAGTCCCCAACTATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGAAAGCGAACAAAATCATCTGGGGCTCTGGCAGCCATACTCCATTCCAACGACCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PKANKIIWGSGSHTPFQRPLVKC*CQKGWF Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...TCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAGGACGTACTGTGCCAGGAAGTCACGTGCCAACAAATATACTCGGAACTCCTGTTTAGTTTCCCATaGTCCCACTCTCCATTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: REDVLCQEVTCQQIYSELLFSFP*SHSPFA Trigger: GGCAAATGGAGAGTGGGATCATGGGAAACTAAACAG...GAGTTCCGAGTATATTTGTTGGCACGTGACTTCCTGGCACAGTACGTCCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCGGAATCATTCATTTGTaGGGCATTCAAAAGGACACC | + |
|
Preference number: 2 (lower is better) Translates to: GALSRKQVQSEPEKKVCTGIIHL*GIQKDT Trigger: GGTGTCCTTTTGAATGCCTCACAAATGAATGATTCC...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CAA 90 bp | TATTTTACACATCATCAGTTGTTTCATCCCTGGACAGGAGAGACATaGCCACTTACAACTCACGGCAGGTCATCCAGACCTGAGGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: YFTHHQLFHPWTGET*PLTTHGRSSRPEAV Trigger: TACAGCCTCAGGTCTGGATGACCTGCCGTGAGTTGTAAGTGGCAATGTCTCTCCTGTCCAGGGATGAAACAACTGATGATGTGTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGAAAGCGAACAAAATCATCTGGGGCTCTGGCAGCCATACTCCATTCCAACGAAATGGAGAAAGTGAATaGGCTAGAAAAGTGGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: PKANKIIWGSGSHTPFQRNGESE*ARKVGM Trigger: CATTCCCACTTTTCTAGCCCATTCACTTTCTCCATT...TCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CAA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTaGGCTTCCCCAGAGGGTTGTACTCAGGAGCCCTCAGTAGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HLLLTLIFTEHLELN*ASPEGCTQEPSVGS Trigger: GCTTCCTACTGAGGGCTCCTGAGTACAACCCTCTGGGGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGATGTGGTTTGTGAATGACCCAAAGCACCAGTCCCTCTATAGTTGGGGACTGACTAATGAAAAGATATaGCCTGACCAGGAAGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LMWFVNDPKHQSLYSWGLTNEKI*PDQEVL Trigger: AAGCACTTCCTGGTCAGGTCATATCTTTTCATTAGT...CAGTCCCCAACTATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCCTTCGAGAATCCATGTaGCTAATGAAAAGATATGAC | + |
|
Preference number: 2 (lower is better) Translates to: GALSRKQVQSEPEKKVCTLRESM*LMKRYD Trigger: GTCATATCTTTTCATTAGTCACATGGATTCTCGAAG...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCTTTCTCTATCTTCAAAAGGACCAACTTTTTGGTGTCCCATGGCTATTACTCAGAAAGGTTGGTTTaGGTGTGGGGCTACCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LSFSIFKRTNFLVSHGYYSERLV*VWGYQT Trigger: TGTCTGGTAGCCCCACACCCAAACCAACCTTTCTGA...GTAATAGCCATGGGACACCAAAAAGTTGGTCCTTTTGAAGATAGAGAAAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAATGCTAAGGGCCAAACTGAACAAACTTTTAGAAAGAGCAAAGTATTCCTTGGAAGTGCTTTGCATCTaGATGGCAGGGCATGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: GMLRAKLNKLLERAKYSLEVLCI*MAGHAT Trigger: TGTTGCATGCCCTGCCATTCAGATGCAAAGCACTTC...CAAGGAATACTTTGCTCTTTCTAAAAGTTTGTTCAGTTTGGCCCTTAGCATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CAA 90 bp | TTTGTTCATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTaGAATTTGGCTTCCCCAGAGGGTTGTACTCAGGAGCCCTCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: FVHLLLTLIFTEHLE*NLASPEGCTQEPSV Trigger: TACTGAGGGCTCCTGAGTACAACCCTCTGGGGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATGAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTTGGCTTCCAAAGCAAACAGAGGATaGGAAACACGGGCTCCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HLLLTLIFTEHLELNLASKANRG*ETRAPE Trigger: TTCCGGAGCCCGTGTTTCTCATCCTCTGTTTGCTTT...GGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGGCAAAGGCTTCTCCAAGATGCATTATTATTATGTTTTTGGCATACATACTGATACACGCTCACACATaGACACCGCTGACCACACAT | + |
|
Preference number: 2 (lower is better) Translates to: VAKASPRCIIIMFLAYILIHAHT*TPLTTH Trigger: ATGTGTGGTCAGCGGTGTGCATGTGTGAGCGTGTAT...CAGTATGTATGCCAAAAACATAATAATAATGCATCTTGGAGAAGCCTTTGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTTGGCTTCCGGCCTGGCCAAGTCATaGCTGATGTGGTTTGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLLLTLIFTEHLELNLASGLAKS*LMWFVN Trigger: ATTCACAAACCACATCAGGCATGACTTGGCCAGGCC...GGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTTGGCTTCCCAGTCCCTCTATAGTTaGGGACTGTCATCCAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: HLLLTLIFTEHLELNLASQSLYS*GLSSKA Trigger: GGCTTTGGATGACAGTCCCCAACTATAGAGGGACTG...GGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTTGGCTTCCGTCATTGAACAGTTCTaGAATCCCTCTCTTTCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: HLLLTLIFTEHLELNLASVIEQF*NPSLSL Trigger: TAGAGAAAGAGAGGGATTGCAGAACTGTTCAATGAC...GGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTTGGCTTCCAAGCAGAAAACATGCTaGTGTGTCAGTAATAGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: HLLLTLIFTEHLELNLASKQKTC*CVSNRF Trigger: AAACCTATTACTGACACATCAGCATGTTTTCTGCTT...GGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTTGGCTTCCACAAAAATGTGCTTTTaGAGAAACAGCAGACTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: HLLLTLIFTEHLELNLASTKMCF*RNSRLS Trigger: AGAGAGTCTGCTGTTTCTTCAAAAGCACATTTTTGT...GGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGCAAAGGCTTCTCCAAGATGCATTATTATTATGTTTTTGGCATACATACTGGTCCTGAGAATATTCTaGTCATGCACAAATGCATTA | + |
|
Preference number: 2 (lower is better) Translates to: VAKASPRCIIIMFLAYILVLRIF*SCTNAL Trigger: TAATGCATTTGTGCATGACCAGAATATTCTCAGGAC...CAGTATGTATGCCAAAAACATAATAATAATGCATCTTGGAGAAGCCTTTGCCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGGCAAAGGCTTCTCCAAGATGCATTATTATTATGTTTTTGGCATACATACTGATACATACGCATAGATaGACACCAAAATATGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: VAKASPRCIIIMFLAYILIHTHR*TPKYES Trigger: TGACTCATATTTTGGTGTGCATCTATGCGTATGTAT...CAGTATGTATGCCAAAAACATAATAATAATGCATCTTGGAGAAGCCTTTGCCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 72 bp | CAGGGAGGGAGGGCATCACACCTCAGCCTAGTCAGCTaGAGGAAGCCAATCCCAGCCGGTGGGGACAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QGGRASHLSLVS*RKPIPAGGDKP Trigger: TGGCTTGTCCCCACCGGCTGGGATTGGCTTCCTGCAGCTGACTAGGCTGAGGTGTGATGCCCTCCCTCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 72 bp | CCCAGCCGGTGGGGACAAGCCACACACAGAGCTGTCTaGGATCCACAGGCATCGATGCCTGAGGATCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PSRWGQATHRAV*DPQASMPEDLT Trigger: AGTGAGATCCTCAGGCATCGATGCCTGTGGATCTCAGACAGCTCTGTGTGTGGCTTGTCCCCACCGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | AGTGAATGGGCTAGAAAAGTGGGAATGGGCTGGGTGTaGGAAGGGGAGACGCACGACGAAGCACACCGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SEWARKVGMGWV*EGETHDEAHRG Trigger: GCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTTCTAGCCCATTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | GATCCAGGGCCCTGCTTCCTGAAGCAACACAGACCCTaGCCAAGTGAGATCGCTAGAACACAGAGCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DPGPCFLKQHRP*PSEIARTQSKA Trigger: TGCCTTGCTCTGTGTTCTAGCGATCTCACTTGGCCAGGGTCTGTGTTGCTTCAGGAAGCAGGGCCCTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | GGAGAAAGTGAATGGGCTAGAAAAGTGGGAATGGGCTaGGTGTGGGAAGGGGAGACGCACGACGAAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GESEWARKVGMG*VWEGETHDEAH Trigger: GTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTTCTAGCCCATTCACTTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGAAAGCGAACAAAATCATCTGGGGCTCTGGCAGCCATACTCCATTCCAACGAGTCAGAAAGGTTGGTTaGGGTGTGGGGCTACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PKANKIIWGSGSHTPFQRVRKVG*GVGLPD Trigger: GTCTGGTAGCCCCACACCCAAACCAACCTTTCTGAC...TCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAGGCTTAACATGGCACCTTTCTaGTTTGGAACTAAAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: GLGVGRGDARRSTPWQRLNMAPF*FGTKRQ Trigger: TTGTCTTTTAGTTCCAAACAAGAAAGGTGCCATGTT...AAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 72 bp | GGTTCCATGTGTCTGGGTGGGCCACAGTGCAACCCTTaGACACTTCTCTCCTTAAGTACTCATCTGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GSMCLGGPQCNP*TLLSLSTHLCP Trigger: AGGGCACAGATGAGTACTTAAGGAGAGAAGTGTTCAAGGGTTGCACTGTGGCCCACCCAGACACATGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTaGGTGTGGGGCTACCAGACAGGAAACAAGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASGKVLMSERLV*VWGYQTGNKLS Trigger: GGACAGCTTGTTTCCTGTCTGGTAGCCCCACACCCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | AGGGCATCACTGGATCCGCAGAGAAGTCAGATACTGTaGAGGCAGGAGACCGGAAAACATCCATGGATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RASLDPQRSQIL*RQETGKHPWME Trigger: TTCCATCCATGGATGTTTTCCGGTCTCCTGCCTCCACAGTATCTGACTTCTCTGCGGATCCAGTGATGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCACCTTTCTTGTTaGGAACTAAAAGACAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSGNGLGVGRGDARRSTPWHLSC*ELKDNK Trigger: CTTGTTGTCTTTTAGTTCCAAACAAGAAAGGTGCCA...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGCTTACTTATCTGGGGTaGGTGGAATTAAAAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KSGNGLGVGRGDARRSTPLTYLG*VELKGN Trigger: GTTTCCTTTTAATTCCACCAACCCCAGATAAGTAAG...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | ACACAGGCCGAAAGCGAACAAAATCATCTGGGGCTCTaGCAGCCATACTCCATTCCAACGACTCAGAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TQAESEQNHLGL*QPYSIPTTQNP Trigger: AGGATTCTGAGTCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGGCCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | TCTTCATCGAGTACTGGATGGTTCCATGTGTCTGGGTaGGCCACAGTGCAACCCTTGAACACTTCTCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSSTGWFHVSG*ATVQPLNTSLL Trigger: AAGGAGAGAAGTGTTCAAGGGTTGCACTGTGGCCCACCCAGACACATGGAACCATCCAGTACTCGATGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR-3UTR CAA 90 bp | GACGCACGACGAAGCACACCGTGGCAAAGGCTTCTCCAAGATGCATTATTATTACTGATGTCAGAAAGGTaGGTTTGGGTGTGGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: DARRSTPWQRLLQDALLLLMSER*VWVWGY Trigger: GTAGCCCCACACCCAAACCAACCTTTCTGACATCAG...TAATAATAATGCATCTTGGAGAAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 72 bp | ATCATCAGTTGTTTCATCCCTGGACAGGAGAGACATTaGCACTTACAACTCACGGCAGGTCATCCAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: IISCFIPGQERH*HLQLTAGHPDL Trigger: CAGGTCTGGATGACCTGCCGTGAGTTGTAAGTGGCAATGTCTCTCCTGTCCAGGGATGAAACAACTGATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 72 bp | TATGAGTCAGTTGCGTTTATGCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTTGGGTGTGGGGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: YESVAFMPLVKC*CQKGWFGCGAT Trigger: GGTAGCCCCACACCCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACGCAACTGACTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 72 bp | CTCTGGGTTCTTTTATCTGGTTTCCCCCTCACCCAGTaGCTGAGTCCCATCATGCTATTCTCAAACATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LWVLLSGFPLTQ*LSPIMLFSNIG Trigger: GCCTATGTTTGAGAATAGCATGATGGGACTCAGTCACTGGGTGAGGGGGAAACCAGATAAAAGAACCCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 72 bp | CCTGTTCTATTTAGAGACAAAGGCCTGGCCAAGTCATaGCTGATGTGGTTTGTGAATGACCCAAAGCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PVLFRDKGLAKS*LMWFVNDPKHQ Trigger: CTGGTGCTTTGGGTCATTCACAAACCACATCAGGCATGACTTGGCCAGGCCTTTGTCTCTAAATAGAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 72 bp | CCACACACAGAGCTGTCTGAGATCCACAGGCATCGATaGCTGAGGATCTCACTAATTAACTCTGAGGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PHTELSEIHRHR*LRISLINSEEV Trigger: AACTTCCTCAGAGTTAATTAGTGAGATCCTCAGGCATCGATGCCTGTGGATCTCAGACAGCTCTGTGTGTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | GGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGGGTGTaGGGCTACCAGACAGGAAACAAGCTGTCCATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GKVLMSERLVWV*GYQTGNKLSIY Trigger: ATAGATGGACAGCTTGTTTCCTGTCTGGTAGCCCCACACCCAAACCAACCTTTCTGACATCAGCACTTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | TTTAGAGACAAAGGCCTGGCCAAGTCATGCCTGATGTaGTTTGTGAATGACCCAAAGCACCAGTCCCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FRDKGLAKSCLM*FVNDPKHQSLY Trigger: ATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAGGCATGACTTGGCCAGGCCTTTGTCTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | TCCTTGTATTTTACACATCATCAGTTGTTTCATCCCTaGACAGGAGAGACATTGCCACTTACAACTCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLYFTHHQLFHP*TGETLPLTTHG Trigger: GCCGTGAGTTGTAAGTGGCAATGTCTCTCCTGTCCAGGGATGAAACAACTGATGATGTGTAAAATACAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 72 bp | AGTTATCTGACCCTAGGTTCTAGCTTCTCAGGGCATTaGATGGCATTTTCTCATCTAGTTAATATCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SYLTLGSSFSGH*MAFSHLVNIQG Trigger: CCCCTGGATATTAACTAGATGAGAAAATGCCATTCAATGCCCTGAGAAGCTAGAACCTAGGGTCAGATAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | AGGGTATGCTATGCACCTTTCCAGCATGGTAATTCATaGCTGAAACAGAAACAAGAGCTTATGGTCTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: RVCYAPFQHGNS*LKQKQELMVLI Trigger: GATCAAGACCATAAGCTCTTGTTTCTGTTTCAGCCATGAATTACCATGCTGGAAAGGTGCATAGCATACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | TGTATTTTATTTCTCTCACTCTCTCATCTCTCACCGTaGAATACAACAGGAACCTGGGAAGAAACCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: CILFLSLSHLSP*NTTGTWEETYR Trigger: CCTGTAGGTTTCTTCCCAGGTTCCTGTTGTATTCCACGGTGAGAGATGAGAGAGTGAGAGAAATAAAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 72 bp | ATAATTAACCATGGAAAGATGCCTACCTTGAAATGGTaGCAGTTGACAATGGGACTTCCTAATGGCTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: IINHGKMPTLKW*QLTMGLPNGYG Trigger: ACCATAGCCATTAGGAAGTCCCATTGTCAACTGTCACCATTTCAAGGTAGGCATCTTTCCATGGTTAATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 72 bp | TTATTTGGTAAAAACAATTCCAAGAAAGGCCAGGCATaGTTTTCTTCATCGAGTACTGGATGGTTCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFGKNNSKKGQA*FSSSSTGWFHV Trigger: CACATGGAACCATCCAGTACTCGATGAAGAAAAGCATGCCTGGCCTTTCTTGGAATTGTTTTTACCAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | TCTGAATGGCAGGGCATGCAACATTTCAGATGCATTTaGAATGACCAAATAATTAACCATGGAAAGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SEWQGMQHFRCI*NDQIINHGKMP Trigger: AGGCATCTTTCCATGGTTAATTATTTGGTCATTCCAAATGCATCTGAAATGTTGCATGCCCTGCCATTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR GCA 72 bp | TTTGCATCTGAATGGCAGGGCATGCAACATTTCAGATaGATTTGGAATGACCAAATAATTAACCATGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FASEWQGMQHFR*IWNDQIINHGK Trigger: CTTTCCATGGTTAATTATTTGGTCATTCCAAATGCATCTGAAATGTTGCATGCCCTGCCATTCAGATGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR TCA 72 bp | ATCATGGTATACAATTACACTAACCTCTTGTTAACTTaGGCCTGTTTGACAGATGCAATCTTTGTGGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: IMVYNYTNLLLT*ACLTDAIFVVL Trigger: CAACACCACAAAGATTGCATCTGTCAAACAGGCTCAAGTTAACAAGAGGTTAGTGTAATTGTATACCATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CCA 72 bp | CTCTATCTTCAAAAGGACCAACTTTTTGGTGTCCCATaGCTATTACTGAATTATCTCTTATTCAGTTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: LYLQKDQLFGVP*LLLNYLLFSSI Trigger: TATAGAACTGAATAAGAGATAATTCAGTAATAGCCATGGGACACCAAAAAGTTGGTCCTTTTGAAGATAGAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAGGCTTTCTCCAGCAGGGACCTaGGCACGCCGTAGGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLGVGRGDARRSTPWQRLSPAGT*ARRREA Trigger: CGCCTCCCTACGGCGTGCTCAGGTCCCTGCTGGAGA...AAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGAGTTCGGAGACGGGATaGCCGGGTGGAGGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSGNGLGVGRGDARRSTPSSETG*PGGGAL Trigger: CAGCGCCCCTCCACCCGGGCATCCCGTCTCCGAACT...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAGGCTTGGACGGTCGGGCTGCTaGTCTCATCGTCCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGVGRGDARRSTPWQRLGRSGC*SHRPAS Trigger: AGAAGCTGGACGATGAGAGCAGCAGCCCGACCGTCC...AAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | GGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAACGGTGTATTGCGGTTTaGTGGCAACAGCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMGWVWEGETHDEAHRGKRCIAV*WQQLAW Trigger: CCAGGCCAGCTGTTGCCAGCAAACCGCAATACACCG...TTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTTTCCTGCCCCGGGATaGTGGAGAGGGCAAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSGNGLGVGRGDARRSTPFPAPG*WRGQGL Trigger: CAGACCTTGCCCTCTCCAGCATCCCGGGGCAGGAAA...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGAAATCAGCCACCTCCTaGCGGAGGGCCGAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSGNGLGVGRGDARRSTPKSATS*RRAEFS Trigger: GGAGAACTCGGCCCTCCGCCAGGAGGTGGCTGATTT...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGACAGGGGCCCGTGCCTaGCCTCGTACTTGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSGNGLGVGRGDARRSTPTGARA*PRTWQV Trigger: TACTTGCCAAGTACGAGGCCAGGCACGGGCCCCTGT...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGGGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTTTGCTGGCAACAGCTaGCCTGGTCTGATGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSGNGLGVGRGDARRSTPFAGNS*PGLMGL Trigger: GAGCCCCATCAGACCAGGCCAGCTGTTGCCAGCAAA...CGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCCCACTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | CTAGAGAGGACGTACTGTGCCAGGAAGTCACGTGCCAACAAATATACTCGGAACAGTTCGGAGACGGGATaGCCGGGTGGAGGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LERTYCARKSRANKYTRNSSETG*PGGGAL Trigger: CAGCGCCCCTCCACCCGGGCATCCCGTCTCCGAACT...GTTCCGAGTATATTTGTTGGCACGTGACTTCCTGGCACAGTACGTCCTCTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAGGCTTTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGVGRGDARRSTPWQRLWQVCS*ICPAPS Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...AAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | CCGAAAGCGAACAAAATCATCTGGGGCTCTGGCAGCCATACTCCATTCCAACGAGGTCTGATGGGGCTCTaGATACAGTTCGGAGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKANKIIWGSGSHTPFQRGLMGL*IQFGDG Trigger: CCCGTCTCCGAACTGTATGCAGAGCCCCATCAGACC...TCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAGGCTTGTATGTTCTTGCATTTaGCCAGCTCCTTCCTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGVGRGDARRSTPWQRLVCSCI*PAPSLN Trigger: ATTTAAGGAAGGAGCTGGGCAAATGCAAGAACATAC...AAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGAGAGGACGTACTGTGCCAGGAAGTCACGTGCCAACAAATATACTCGGTTTGCTGGCAACAGCTaGCCTGGTCTGATGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLERTYCARKSRANKYTRFAGNS*PGLMGL Trigger: GAGCCCCATCAGACCAGGCCAGCTGTTGCCAGCAAA...CCGAGTATATTTGTTGGCACGTGACTTCCTGGCACAGTACGTCCTCTCTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAAACCACCTGTTTAGTTTCCCATGATCCCACTCTCCATTTGCCCATGGCCACAGCTGGCCTGGTCTaGTGGGGCTCTGCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKTTCLVSHDPTLHLPMATAGLV*WGSAYS Trigger: ACTGTATGCAGAGCCCCATCAGACCAGGCCAGCTGT...GGCCATGGGCAAATGGAGAGTGGGATCATGGGAAACTAAACAGGTGGTTTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR GCA 90 bp | TATTTCAGAAAACTCCTAGAGAGGACGTACTGTGCCAGGAAGTCACGTGCCAACGGAGAGGGCAAGGTCTaGCGGGTCTGGTTCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: YFRKLLERTYCARKSRANGEGKV*RVWFIP Trigger: GGGTATGAACCAGACCCGGCAGACCTTGCCCTCTCC...GTTGGCACGTGACTTCCTGGCACAGTACGTCCTCTCTAGGAGTTTTCTGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGAGGACGTACTGTGCCAGGAAGTCACGTGCCAACAAATATACTCGGAATGGCAACAGCTGGCCTaGTCTGATGGGGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PREDVLCQEVTCQQIYSEWQQLA*SDGALH Trigger: ATGCAGAGCCCCATCAGACCAGGCCAGCTGTTGCCA...TTCCGAGTATATTTGTTGGCACGTGACTTCCTGGCACAGTACGTCCTCTCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCCATCACGGGAGCGCTTaGCCGCCATGTTGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GALSRKQVQSEPEKKVCTHHGSA*PPCCSF Trigger: GAAAGAACAACATGGCGGCCAAGCGCTCCCGTGATG...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CAA 72 bp | CGAACACCTGGAGTTGAATTTGGCTTCCCCAGAGGGTaGTACTCAGGAGCCCTCAGTAGGAAGCAAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTPGVEFGFPRG*YSGALSRKQVQ Trigger: TTGCACTTGCTTCCTACTGAGGGCTCCTGAGTACAACCCTCTGGGGAAGCCAAATTCAACTCCAGGTGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCTGTATTGCGGTTTGCTaGCAACAGCTGGCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GALSRKQVQSEPEKKVCTCIAVC*QQLAWS Trigger: AGACCAGGCCAGCTGTTGCCAGCAAACCGCAATACA...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | CCGAAAGCGAACAAAATCATCTGGGGCTCTGGCAGCCATACTCCATTCCAACGATGGTGTCAGGGTCAATaGGACTCGGTGTATTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKANKIIWGSGSHTPFQRWCQGQ*DSVYCG Trigger: ACCGCAATACACCGAGTCCCATTGACCCTGACACCA...TCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCTTTTGTCCCATAAGGTaGGTCCCAAGAAGGCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GALSRKQVQSEPEKKVCTFCPIR*VPRRRT Trigger: AGTCCGCCTTCTTGGGACCCACCTTATGGGACAAAA...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | CGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACCACCTGCGGTGTATTGCGGTTTaGTGGCAACAGCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNSQIFCSVCIQTSKNHLRCIAV*WQQLAW Trigger: CCAGGCCAGCTGTTGCCAGCAAACCGCAATACACCG...CAGGTGGTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR GCA 90 bp | CTGATGTGGTTTGTGAATGACCCAAAGCACCAGTCCCTCTATAGTTGGGGACTGCCATGTTGTTCTTTCTaGGCCTCGCCCAGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMWFVNDPKHQSLYSWGLPCCSF*ASPSTC Trigger: ACAAGTACTGGGCGAGGCGCAGAAAGAACAACATGG...CAGTCCCCAACTATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | GACGCACGACGAAGCACACCGTGGCAAAGGCTTCTCCAAGATGCATTATTATTATACCCGACTGGTACCTaGATGGTGTCAGGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: DARRSTPWQRLLQDALLLYPTGT*MVSGSM Trigger: CATTGACCCTGACACCATCCAGGTACCAGTCGGGTA...TAATAATAATGCATCTTGGAGAAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CAA 72 bp | CATCATCAGTTGTTTCATCCCTGGACAGGAGAGACATaGCCACTTACAACTCACGGCAGGTCATCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HHQLFHPWTGET*PLTTHGRSSRP Trigger: AGGTCTGGATGACCTGCCGTGAGTTGTAAGTGGCAATGTCTCTCCTGTCCAGGGATGAAACAACTGATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGCGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGGGTGTGGGACTCGGTGTATTaGGGTTTGCTGGCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCVYASGKVLMSERLVWVWDSVY*GLLATA Trigger: AGCTGTTGCCAGCAAACCGCAATACACCGAGTCCCA...CACCCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | ATACTCGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACCTTTCCTGCCCCGGGATaGTGGAGAGGGCAAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGTLRSFVLCAYRLPKTFPAPG*WRGQGL Trigger: CAGACCTTGCCCTCTCCAGCATCCCGGGGCAGGAAA...GGTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCGAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCCAGAGAACTTCCGTTTaGGAGGGTCAAACATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GALSRKQVQSEPEKKVCTQRTSV*EGQTFP Trigger: AGGAAATGTTTGACCCTCGCAAACGGAAGTTCTCTG...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| 3UTR CAA 72 bp | TTGACACTGATTTTTACCGAACACCTGGAGTTGAATTaGGCTTCCCCAGAGGGTTGTACTCAGGAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLIFTEHLELN*ASPEGCTQEPS Trigger: TGAGGGCTCCTGAGTACAACCCTCTGGGGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCTTTCTCTATCTTCAAAAGGACCAACTTTTTGGTGTCCCATGGCTATTACAATGCGTCTTCAGGATaGAGGGGGAGCTTCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFSIFKRTNFLVSHGYYNASSG*RGSFSG Trigger: CCCGCTGAAGCTCCCCCTTCATCCTGAAGACGCATT...GTAATAGCCATGGGACACCAAAAAGTTGGTCCTTTTGAAGATAGAGAAAGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCTCAGTAGGAAGCAAGTGCAATCAGAGCCAGAGAAGAAGGTATGTACCTCAAATCATCGGGAATaGAGACTTTGCGAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GALSRKQVQSEPEKKVCTSNHRE*RLCELS Trigger: AGAAAGCTCGCAAAGTCTTCATTCCCGATGATTTGA...GGTACATACCTTCTTCTCTGGCTCTGATTGCACTTGCTTCCTACTGAGGGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | CGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACCACCTGTGGGACTCGGTGTATTaGGGTTTGCTGGCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNSQIFCSVCIQTSKNHLWDSVY*GLLATA Trigger: AGCTGTTGCCAGCAAACCGCAATACACCGAGTCCCA...CAGGTGGTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CCA 90 bp | CTGATGTGGTTTGTGAATGACCCAAAGCACCAGTCCCTCTATAGTTGGGGACTGCTTAATCATGGGCTGTaGCTTCAGTTCTTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMWFVNDPKHQSLYSWGLLNHGL*LQFFLR Trigger: TCTGAGGAAGAACTGAAGCCACAGCCCATGATTAAG...CAGTCCCCAACTATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | GACGCACGACGAAGCACACCGTGGCAAAGGCTTCTCCAAGATGCATTATTATTAGCCTGGCCTCGTACTTaGCAAGTATGTTCTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DARRSTPWQRLLQDALLLAWPRT*QVCSCI Trigger: AATGCAAGAACATACTTGCCAAGTACGAGGCCAGGC...TAATAATAATGCATCTTGGAGAAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGCTAAGGGCCAAACTGAACAAACTTTTAGAAAGAGCAAAGTATTCCTTGACAGCTGGCCTGGTCTaGTGGGGCTCTGCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMLRAKLNKLLERAKYSLTAGLV*WGSAYS Trigger: ACTGTATGCAGAGCCCCATCAGACCAGGCCAGCTGT...CAAGGAATACTTTGCTCTTTCTAAAAGTTTGTTCAGTTTGGCCCTTAGCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR GCA 90 bp | CATTTATTATTGACACTGATTTTTACCGAACACCTGGAGTTGAATTTGGCTTCCGGAGAGGGCAAGGTCTaGCGGGTCTGGTTCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLLTLIFTEHLELNLASGEGKV*RVWFIP Trigger: GGGTATGAACCAGACCCGGCAGACCTTGCCCTCTCC...GGAAGCCAAATTCAACTCCAGGTGTTCGGTAAAAATCAGTGTCAATAATAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | GGAATGCTAAGGGCCAAACTGAACAAACTTTTAGAAAGAGCAAAGTATTCCTTGTGGCAACAGCTGGCCTaGTCTGATGGGGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMLRAKLNKLLERAKYSLWQQLA*SDGALH Trigger: ATGCAGAGCCCCATCAGACCAGGCCAGCTGTTGCCA...CAAGGAATACTTTGCTCTTTCTAAAAGTTTGTTCAGTTTGGCCCTTAGCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | TATTTCAGAAAACTCCTAGAGAGGACGTACTGTGCCAGGAAGTCACGTGCCAACCTTAATCATGGGCTGTaGCTTCAGTTCTTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YFRKLLERTYCARKSRANLNHGL*LQFFLR Trigger: TCTGAGGAAGAACTGAAGCCACAGCCCATGATTAAG...GTTGGCACGTGACTTCCTGGCACAGTACGTCCTCTCTAGGAGTTTTCTGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR GCA 90 bp | CCGAAAGCGAACAAAATCATCTGGGGCTCTGGCAGCCATACTCCATTCCAACGATTTTTCTTTACTAAATaGGTCTTCAGGATGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKANKIIWGSGSHTPFQRFFFTK*VFRMKG Trigger: CCCCTTCATCCTGAAGACGCATTTAGTAAAGAAAAA...TCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACAAATATACTCGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTGTATTGCGGTTTGCTaGCAACAGCTGGCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ANKYTRNSQIFCSVCIQTCIAVC*QQLAWS Trigger: AGACCAGGCCAGCTGTTGCCAGCAAACCGCAATACA...AGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCGAGTATATTTGTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCTTTCTCTATCTTCAAAAGGACCAACTTTTTGGTGTCCCATGGCTATTACTGGTTCATACCCGACTaGTACCTGGATGGTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFSIFKRTNFLVSHGYYWFIPD*YLDGVR Trigger: CCTGACACCATCCAGGTACCAGTCGGGTATGAACCA...GTAATAGCCATGGGACACCAAAAAGTTGGTCCTTTTGAAGATAGAGAAAGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CCA 90 bp | TATACTCGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACTGGTGTCAGGGTCAATaGGACTCGGTGTATTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YTRNSQIFCSVCIQTSKNWCQGQ*DSVYCG Trigger: ACCGCAATACACCGAGTCCCATTGACCCTGACACCA...GTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCGAGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CCA 90 bp | CCAACAAATATACTCGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTTACCCGACTGGTACCTaGATGGTGTCAGGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PTNILGTLRSFVLCAYRLYPTGT*MVSGSM Trigger: CATTGACCCTGACACCATCCAGGTACCAGTCGGGTA...AAGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCGAGTATATTTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACCACCTGTTTATGGTTCATACCCGACTaGTACCTGGATGGTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRSFVLCAYRLPKTTCLWFIPD*YLDGVR Trigger: CCTGACACCATCCAGGTACCAGTCGGGTATGAACCA...TAAACAGGTGGTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACCACCTGTTTACAGAGAACTTCCGTTTaGGAGGGTCAAACATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRSFVLCAYRLPKTTCLQRTSV*EGQTFP Trigger: AGGAAATGTTTGACCCTCGCAAACGGAAGTTCTCTG...TAAACAGGTGGTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| 3UTR CAA 72 bp | AGAGCAAAGTATTCCTTGTATTTTACACATCATCAGTaGTTTCATCCCTGGACAGGAGAGACATTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RAKYSLYFTHHQ*FHPWTGETLPL Trigger: AAGTGGCAATGTCTCTCCTGTCCAGGGATGAAACAACTGATGATGTGTAAAATACAAGGAATACTTTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CCA 90 bp | GGTCTGATGGGGCTCTGCATACAGTTCGGAGACGGGATGCCCGGGTaGAGGGGCGCTGTGGCCCGGCTGCTGAGATCCATGACCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLMGLCIQFGDGMPG*RGAVARLLRSMTEG Trigger: GCCCTCGGTCATGGATCTCAGCAGCCGGGCCACAGCGCCCCTCCACCCGGGCATCCCGTCTCCGAACTGTATGCAGAGCCCCATCAGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAGGCTTCGCTTGGCCGCCATGTaGTTCTTTCTGCGCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGVGRGDARRSTPWQRLRLAAM*FFLRLA Trigger: GGCGAGGCGCAGAAAGAACAACATGGCGGCCAAGCG...AAGCCTTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | GGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAATCGGTGTATTGCGGTTaGCTGGCAACAGCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GMGWVWEGETHDEAHRGKSVYCG*LATAGL Trigger: CAGGCCAGCTGTTGCCAGCAAACCGCAATACACCGA...TTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | GGAATGGGCTGGGTGTGGGAAGGGGAGACGCACGACGAAGCACACCGTGGCAAAATGGGACTCGGTGTATaGCGGTTTGCTGGCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GMGWVWEGETHDEAHRGKMGLGV*RFAGNS Trigger: GCTGTTGCCAGCAAACCGCAATACACCGAGTCCCAT...TTTGCCACGGTGTGCTTCGTCGTGCGTCTCCCCTTCCCACACCCAGCCCATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CCA 90 bp | GCTGGAAAGTATCTCCGTCATAGGGAAGGGTTTTGTCCCATAAGGTaGGTCCCAAGAAGGCGGACTGGGGGACGGTCGGGCTGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGKYLRHREGFCPIR*VPRRRTGGRSGCCS Trigger: AGAGCAGCAGCCCGACCGTCCCCCAGTCCGCCTTCTTGGGACCCACCTTATGGGACAAAACCCTTCCCTATGACGGAGATACTTTCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CCA 90 bp | GGGCAAGGTCTGCCGGGTCTGGTTCATACCCGACTGGTACCTGGATaGTGTCAGGGTCAATGGGACTCGGTGTATTGCGGTTTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQGLPGLVHTRLVPG*CQGQWDSVYCGLLA Trigger: TGCCAGCAAACCGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACCCGGCAGACCTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CCA 90 bp | GATGCTGGAGAGGGCAAGGTCTGCCGGGTCTGGTTCATACCCGACTaGTACCTGGATGGTGTCAGGGTCAATGGGACTCGGTGTATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: DAGEGKVCRVWFIPD*YLDGVRVNGTRCIA Trigger: CGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACCCGGCAGACCTTGCCCTCTCCAGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CCA 90 bp | GGTCTGGTTCATACCCGACTGGTACCTGGATGGTGTCAGGGTCAATaGGACTCGGTGTATTGCGGTTTGCTGGCAACAGCTGGCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLVHTRLVPGWCQGQ*DSVYCGLLATAGLV Trigger: GACCAGGCCAGCTGTTGCCAGCAAACCGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CCA 90 bp | GAGAGGGCAAGGTCTGCCGGGTCTGGTTCATACCCGACTGGTACCTaGATGGTGTCAGGGTCAATGGGACTCGGTGTATTGCGGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERARSAGSGSYPTGT*MVSGSMGLGVLRFA Trigger: AGCAAACCGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACCCGGCAGACCTTGCCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS GCA 90 bp | CCCATAAGGTGGGTCCCAAGAAGGCGGACTGGGGGACGGTCGGGCTaGTGCTCTCATCGTCCAGCTTCTTTCCTTTGTCTTTTTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PIRWVPRRRTGGRSG*CSHRPASFLCLFLY Trigger: GTAAAGAAAAAGACAAAGGAAAGAAGCTGGACGATGAGAGCAGCAGCCCGACCGTCCCCCAGTCCGCCTTCTTGGGACCCACCTTATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | CCGAAAGCGAACAAAATCATCTGGGGCTCTGGCAGCCATACTCCATTCCAACGAGCATCACGGGAGCGCTaGGCCGCCATGTTGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PKANKIIWGSGSHTPFQRASRER*AAMLFF Trigger: AAAGAACAACATGGCGGCCAAGCGCTCCCGTGATGC...TCGTTGGAATGGAGTATGGCTGCCAGAGCCCCAGATGATTTTGTTCGCTTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | CTGATGTGGTTTGTGAATGACCCAAAGCACCAGTCCCTCTATAGTTGGGGACTGTCAGAGAACTTCCGTTaGCGAGGGTCAAACATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMWFVNDPKHQSLYSWGLSENFR*RGSNIS Trigger: GGAAATGTTTGACCCTCGCAAACGGAAGTTCTCTGA...CAGTCCCCAACTATAGAGGGACTGGTGCTTTGGGTCATTCACAAACCACATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | TACTCGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACCATCGGTGTATTGCGGTTaGCTGGCAACAGCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSELSDLLFCVHTDFQKPSVYCG*LATAGL Trigger: CAGGCCAGCTGTTGCCAGCAAACCGCAATACACCGA...TGGTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCGAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CAA 90 bp | TATACTCGGAACTCTCAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACATGGGACTCGGTGTATaGCGGTTTGCTGGCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: YTRNSQIFCSVCIQTSKNMGLGV*RFAGNS Trigger: GCTGTTGCCAGCAAACCGCAATACACCGAGTCCCAT...GTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTGAGAGTTCCGAGTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CAA 90 bp | GGAATGCTAAGGGCCAAACTGAACAAACTTTTAGAAAGAGCAAAGTATTCCTTGGGAATGAGGCCCGGATaGCGATCTGGTTCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GMLRAKLNKLLERAKYSLGMRPG*RSGSPS Trigger: TGAAGGAGAACCAGATCGCAATCCGGGCCTCATTCC...CAAGGAATACTTTGCTCTTTCTAAAAGTTTGTTCAGTTTGGCCCTTAGCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGCGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGGGTGAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCVYASGKVLMSERLVWVSMFLH*PSSFLK Trigger: TTTAAGGAAGGAGCTGGGCAAATGCAAGAACATACT...CACCCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTTTCTCTATCTTCAAAAGGACCAACTTTTTGGTGTCCCATGGCTATTACTGCCTGGCCTCGTACTaGGCAAGTATGTTCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSFSIFKRTNFLVSHGYYCLASY*ASMFLH Trigger: ATGCAAGAACATACTTGCCAAGTACGAGGCCAGGCA...GTAATAGCCATGGGACACCAAAAAGTTGGTCCTTTTGAAGATAGAGAAAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS-3UTR CAA 90 bp | CAGATCTTTTGTTCTGTGTGCATACAGACTTCCAAAAACCACCTGTTTAGTTTCTCGGGAATGAAGACTTaGCGAGCTTTCTTAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: QIFCSVCIQTSKNHLFSFSGMKT*RAFLIM Trigger: CATGATTAAGAAAGCTCGCAAAGTCTTCATTCCCGA...GAAACTAAACAGGTGGTTTTTGGAAGTCTGTATGCACACAGAACAAAAGATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCAAAGGCTTCTCCAAGATGCATTATTATTATGTTTTTGGCATACATACTGTCGGGAATGAAGACTTaGCGAGCTTTCTTAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: VAKASPRCIIIMFLAYILSGMKT*RAFLIM Trigger: CATGATTAAGAAAGCTCGCAAAGTCTTCATTCCCGA...CAGTATGTATGCCAAAAACATAATAATAATGCATCTTGGAGAAGCCTTTGCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CCA 72 bp | GGGCTCTGCATACAGTTCGGAGACGGGATGCCCGGGTaGAGGGGCGCTGTGGCCCGGCTGCTGAGATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GLCIQFGDGMPG*RGAVARLLRSM Trigger: CATGGATCTCAGCAGCCGGGCCACAGCGCCCCTCCACCCGGGCATCCCGTCTCCGAACTGTATGCAGAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CCA 72 bp | CCCCGGGATGCTGGAGAGGGCAAGGTCTGCCGGGTCTaGTTCATACCCGACTGGTACCTGGATGGTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRDAGEGKVCRV*FIPDWYLDGVR Trigger: CCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACCCGGCAGACCTTGCCCTCTCCAGCATCCCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS GCA 72 bp | TTTGCTGGCAACAGCTGGCCTGGTCTGATGGGGCTCTaGATACAGTTCGGAGACGGGATGCCCGGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FAGNSWPGLMGL*IQFGDGMPGWR Trigger: CCTCCACCCGGGCATCCCGTCTCCGAACTGTATGCAGAGCCCCATCAGACCAGGCCAGCTGTTGCCAGCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CCA 72 bp | GAGGGCAAGGTCTGCCGGGTCTGGTTCATACCCGACTaGTACCTGGATGGTGTCAGGGTCAATGGGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: EGKVCRVWFIPD*YLDGVRVNGTR Trigger: CCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACCCGGCAGACCTTGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CAA 90 bp | CCGACTGGTACCTGGATGGTGTCAGGGTCAATGGGACTCGGTGTATaGCGGTTTGCTGGCAACAGCTGGCCTGGTCTGATGGGGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PTGTWMVSGSMGLGV*RFAGNSWPGLMGLC Trigger: GCAGAGCCCCATCAGACCAGGCCAGCTGTTGCCAGCAAACCGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CAA 90 bp | AGGGGCCCGTGCCTGGCCTCGTACTTGGCAAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTTAAATCAGCCACCTCCTGGCGGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGPCLASYLASMFLH*PSSFLKSATSWRRA Trigger: GGCCCTCCGCCAGGAGGTGGCTGATTTAAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTACGAGGCCAGGCACGGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS GCA 72 bp | TGGGTCCCAAGAAGGCGGACTGGGGGACGGTCGGGCTaGTGCTCTCATCGTCCAGCTTCTTTCCTTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WVPRRRTGGRSG*CSHRPASFLCL Trigger: AAGACAAAGGAAAGAAGCTGGACGATGAGAGCAGCAGCCCGACCGTCCCCCAGTCCGCCTTCTTGGGACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CCA 72 bp | GTCAGGGTCAATGGGACTCGGTGTATTGCGGTTTGCTaGCAACAGCTGGCCTGGTCTGATGGGGCTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VRVNGTRCIAVC*QQLAWSDGALH Trigger: ATGCAGAGCCCCATCAGACCAGGCCAGCTGTTGCCAGCAAACCGCAATACACCGAGTCCCATTGACCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CCA 72 bp | CTGCCGGGTCTGGTTCATACCCGACTGGTACCTGGATaGTGTCAGGGTCAATGGGACTCGGTGTATTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPGLVHTRLVPG*CQGQWDSVYCG Trigger: ACCGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACCCGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS GCA 72 bp | GTCCCAAGAAGGCGGACTGGGGGACGGTCGGGCTGCTaGTCTCATCGTCCAGCTTCTTTCCTTTGTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VPRRRTGGRSGC*SHRPASFLCLF Trigger: AAAAAGACAAAGGAAAGAAGCTGGACGATGAGAGCAGCAGCCCGACCGTCCCCCAGTCCGCCTTCTTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CCA 72 bp | AGGTCTGCCGGGTCTGGTTCATACCCGACTGGTACCTaGATGGTGTCAGGGTCAATGGGACTCGGTGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: RSAGSGSYPTGT*MVSGSMGLGVL Trigger: CAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATGAACCAGACCCGGCAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CAA 72 bp | ACCTGGATGGTGTCAGGGTCAATGGGACTCGGTGTATaGCGGTTTGCTGGCAACAGCTGGCCTGGTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: TWMVSGSMGLGV*RFAGNSWPGLM Trigger: CATCAGACCAGGCCAGCTGTTGCCAGCAAACCGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS CCA 72 bp | CATACCCGACTGGTACCTGGATGGTGTCAGGGTCAATaGGACTCGGTGTATTGCGGTTTGCTGGCAACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HTRLVPGWCQGQ*DSVYCGLLATA Trigger: AGCTGTTGCCAGCAAACCGCAATACACCGAGTCCCATTGACCCTGACACCATCCAGGTACCAGTCGGGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004051.8 ENSMUST00000176001.2 |
||
| CDS GCA 72 bp | GCCCGTGCCTGGCCTCGTACTTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCCTTAAATCAGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ARAWPRTWQVCS*ICPAPSLNQPP Trigger: AGGTGGCTGATTTAAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTACGAGGCCAGGCACGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CAA 72 bp | GCCGCCATGTTGTTCTTTCTGCGCCTCGCCCAGTACTaGTCATCCTTCAAATCATCGGGAATGAAGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AAMLFFLRLAQY*SSFKSSGMKTL Trigger: CAAAGTCTTCATTCCCGATGATTTGAAGGATGACAAGTACTGGGCGAGGCGCAGAAAGAACAACATGGCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CAA 90 bp | CTCGCCCAGTACTTGTCATCCTTCAAATCATCGGGAATGAAGACTTaGCGAGCTTTCTTAATCATGGGCTGTGGCTTCAGTTCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LAQYLSSFKSSGMKT*RAFLIMGCGFSSSS Trigger: TGAGGAAGAACTGAAGCCACAGCCCATGATTAAGAAAGCTCGCAAAGTCTTCATTCCCGATGATTTGAAGGATGACAAGTACTGGGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CAA 72 bp | TACTTGTCATCCTTCAAATCATCGGGAATGAAGACTTaGCGAGCTTTCTTAATCATGGGCTGTGGCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: YLSSFKSSGMKT*RAFLIMGCGFS Trigger: ACTGAAGCCACAGCCCATGATTAAGAAAGCTCGCAAAGTCTTCATTCCCGATGATTTGAAGGATGACAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004051.8 |
||
| CDS CAA 72 bp | TTCCAATTTACCTTCAAATCATCGGGAATGAAGACTTaGCGAGCTTTCTTAATCATGGGCTGTGGCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: FQFTFKSSGMKT*RAFLIMGCGFS Trigger: ACTGAAGCCACAGCCCATGATTAAGAAAGCTCGCAAAGTCTTCATTCCCGATGATTTGAAGGTAAATTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176001.2 |
||