Pregenerated sensors for HLCS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040820Ensembl transcript IDs: ENSMUST00000099512.3, ENSMUST00000163193.9, ENSMUST00000227141.2, ENSMUST00000227698.2, ENSMUST00000228910.2
Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCCTAGGCAGGCAGAGACAACAGTTATGCAAGCGGAGTGCGCCTaGTCAGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: GPRQAETTVMQAECA*SVLPGDPRSSFPVA Trigger: TGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTCCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR GCA 90 bp | TTCCCAGGCCCTAGGCAGGCAGAGACAACAGTTATGCAAGCGGAGTaGGCCTGCTCAGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: FPGPRQAETTVMQAE*ACSVLPGDPRSSFP Trigger: AGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTCCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCCTGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR GCA 90 bp | TCTGCATTAGCTTCCCAGGCCCTAGGCAGGCAGAGACAACAGTTATaGAAGCGGAGTGCGCCTGCTCAGTGCTCCCAGGAGATCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SALASQALGRQRQQL*KRSAPAQCSQEIPG Trigger: TCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTCCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCCTGGGAAGCTAATGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | AGTGGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTaGGCAGCGATGGGTATGATTCACAAGCTCCACAGAGACGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SGRKQEGRQELVLSG*AAMGMIHKLHRDGR Trigger: CCTCCCGTCTCTGTGGAGCTTGTGAATCATACCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | GCTCTAAGCGAAGCGATCTGTTCCGTCCGCCCACTTCAGTGGAAGTaGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ALSEAICSVRPLQWK*QEAGGQTGTSSFRL Trigger: CAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGATCGCTTCGCTTAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | AGCTCCACAGAGACGGGAGGTACACGGGAAAGCACGGAGCACATCTaGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: SSTETGGTRESTEHI*KRKPRKASSPLFFH Trigger: GTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGATGTGCTCCGTGCTTTCCCGTGTACCTCCCGTCTCTGTGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR GCA 90 bp | CTGAAGTCTTTGGTTCATGTGAGGCCAAGTCAGGCCAGTGGGGAATaGAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGAGACAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LKSLVHVRPSQASGE*SFSASGCAVSRDKE Trigger: CTCCTTGTCTCGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTTGGCCTCACATGAACCAAAGACTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | GATCTTGCTCTAAGCGAAGCGATCTGTTCCGTCCGCCCACTTCAGTaGAAGTGGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: DLALSEAICSVRPLQ*KWQEAGGQTGTSSF Trigger: GAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGATCGCTTCGCTTAGAGCAAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR TCA 90 bp | TGGCAGCCTTCACACGCCCCATCGGCAGAAATGCTCTCTACGATGTaGAATCTGAAGTCTTTGGTTCATGTGAGGCCAAGTCAGGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: WQPSHAPSAEMLSTM*NLKSLVHVRPSQAS Trigger: ACTGGCCTGACTTGGCCTCACATGAACCAAAGACTTCAGATTTCACATCGTAGAGAGCATTTCTGCCGATGGGGCGTGTGAAGGCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | GTGAAATCTGAAGTCTTTGGTTCATGTGAGGCCAAGTCAGGCCAGTaGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGAGA | + |
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Preference number: 1 (lower is better) Translates to: VKSEVFGSCEAKSGQ*GMQLQCFRLCCLSR Trigger: TCTCGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTTGGCCTCACATGAACCAAAGACTTCAGATTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | TACAATACAGTGCTGCACTCGGCCCTGCTTGGGGACACAAGCTTATaGGGATGTGGCATTCTAACAGAGCCTGCAACTGATCAGCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: YNTVLHSALLGDTSL*GCGILTEPATDQLK Trigger: TTTAAGCTGATCAGTTGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGCCGAGTGCAGCACTGTATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR GCA 90 bp | CACACACACACACACACACACACACACGCAAAATCAGGCATGCTCTaGACGCACATACGTCTCTCCAAACTGATGGCATTTTTGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHAKSGML*THIRLSKLMAFLCQ Trigger: CTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTGCAGAGCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | TGCCGAAGACCTCTGGTTTCTGGAGTTGGCCCTGACTACAGAAGCTaGATAAAGATGGTACTCGTTTATGACGAGGATCTTGCTCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: CRRPLVSGVGPDYRS*IKMVLVYDEDLALS Trigger: GCTTAGAGCAAGATCCTCGTCATAAACGAGTACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCTTCGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CCA 90 bp | CTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATaGGGAAGAGCACTTCTATACCTCACAAGGCAAACTAAACTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LASHFPPSTHKSKPT*GRALLYLTRQTKLL Trigger: TAGGAGTTTAGTTTGCCTTGTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR GCA 90 bp | TCCTTGGGATATATTTGTACTATCTCAGCGCTATTCCTAACCCCTTaGTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATG | + |
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Preference number: 1 (lower is better) Translates to: SLGYICTISALFLTP*FSFPSQYTQIQAHM Trigger: CATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTTAGGAATAGCGCTGAGATAGTACAAATATATCCCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR TCA 90 bp | CTACCCCAGGGCCAATCAGCATGCCCAGAACATCTCTGTCTGCTCTaGCATGACCACACTTCATTAGTTTTAACTTACAGAAAGGAAATT | + |
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Preference number: 1 (lower is better) Translates to: LPQGQSACPEHLCLL*HDHTSLVLTYRKEI Trigger: AATTTCCTTTCTGTAAGTTAAAACTAATGAAGTGTGGTCATGTCAGAGCAGACAGAGATGTTCTGGGCATGCTGATTGGCCCTGGGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGAATGAGGTTGCCCCGTTGCTGGCATGTCAGGGTAGCAAAGCCGCTCACGTCCGCCCACTTCAGTaGAAGTGGCAGGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TRNEVAPLLACQGSKAAHVRPLQ*KWQEAG Trigger: TCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGAC...GTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGAACACTTGTGTGTTCTaGGACAGCAGTGAGCATGCC | + |
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Preference number: 2 (lower is better) Translates to: SVPSAHFSGSGRKQEGRQNTCVF*DSSEHA Trigger: GGCATGCTCACTGCTGTCCCAGAACACACAAGTGTT...CTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CAA 90 bp | ACAGAGCCTGCAACTGATCAGCTTAAAAGCTCCAAGAATCCTCCCTaGTGTGGGCAAGAGGGTGAGCCCACGTCTCCATCAGCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TEPATDQLKSSKNPP*CGQEGEPTSPSAWA Trigger: TGCCCAGGCTGATGGAGACGTGGGCTCACCCTCTTGCCCACACAAGGGAGGATTCTTGGAGCTTTTAAGCTGATCAGTTGCAGGCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CAA 90 bp | TGCTGGCATGTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTaGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACCCA | + |
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Preference number: 2 (lower is better) Translates to: CWHVRVAKPLTASAE*CETQCLLTCAFQHP Trigger: TGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGACATGCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGAATGAGGTTGCCCCGTTGCTGGCATGTCAGGGTAGCAAAGCCGCTCACGAGCAGCTTCCCTGTTaGAGTAGATCCAAGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TRNEVAPLLACQGSKAAHEQLPC*SRSKLS Trigger: AGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTC...GTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGCAGGGCCAATCAGCATaGCCAGAACATCTCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSQGQSA*PEHLCL Trigger: CAGACAGAGATGTTCTGGGCATGCTGATTGGCCCTG...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGAATGAGGTTGCCCCGTTGCTGGCATGTCAGGGTAGCAAAGCCGCTCACTCTCTCTCTCCTTCCTaGCATTATGAAATTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: TRNEVAPLLACQGSKAAHSLSPS*HYEIGG Trigger: GCCCCCAATTTCATAATGTCAGGAAGGAGAGAGAGA...GTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGAATGAGGTTGCCCCGTTGCTGGCATGTCAGGGTAGCAAAGCCGCTCACAAGCTTATGGGGATGTaGCATTCTAACAGAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TRNEVAPLLACQGSKAAHKLMGM*HSNRAC Trigger: GCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTT...GTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGAGGGAACCCACAACCTaGAGAATTAACAACTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSREPTT*RINNWP Trigger: AGGCCAGTTGTTAATTCTTCAGGTTGTGGGTTCCCT...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGACAAGAAGCCCAACTTaGCAAAGGAAACCAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGTRSPT*QRKPAT Trigger: TGTTGCTGGTTTCCTTTGTCAAGTTGGGCTTCTTGT...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGTCCTTCCTGACATTATaGAATTGGGGGCAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: GRKQEGRQELVLSGWAAMSFLTL*NWGQKV Trigger: GACTTTCTGCCCCCAATTTCATAATGTCAGGAAGGA...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGCATGCCCCTGAGCTGTaGGCATTCACTGTTTCAACA | + |
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Preference number: 2 (lower is better) Translates to: HVRVAKPLTASAELCETQHAPEL*AFTVST Trigger: TGTTGAAACAGTGAATGCCCACAGCTCAGGGGCATG...CTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGAACACTTGTGTGTTCTaGGACAGCAGTGAGCATGCC | + |
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Preference number: 2 (lower is better) Translates to: HVRVAKPLTASAELCETQNTCVF*DSSEHA Trigger: GGCATGCTCACTGCTGTCCCAGAACACACAAGTGTT...CTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACCCAGGGGTAGATAGCACGGAGCACATCTaGAAACGCAAGCCCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LCETQCLLTCAFQHPGVDSTEHI*KRKPRK Trigger: CTTTCTGGGCTTGCGTTTCCAGATGTGCTCCGTGCT...ATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGTACGTCTCTCCAAACTaGTGGCATTTTTGTGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRKQEGRQELVLSGWAAMYVSPN*WHFCVS Trigger: ACTGACACAAAAATGCCATCAGTTTGGAGAGACGTA...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGACAAAGTCTGAGAAATaGACCTTTGCAACAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSTKSEK*TFATAS Trigger: GCTGGCTGTTGCAAAGGTTCATTTCTCAGACTTTGT...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATAGTGCGCCTGCTCAGTaGTCCCAGGAGATCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KDTHTHTHTHTHTRKIRHSAPAQ*SQEIPG Trigger: TCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACT...ATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGTCAATCCTCACCAGATaGACCTTCAAACACCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLSILTR*TFKHPV Trigger: TACTGGGTGTTTGAAGGTGCATCTGGTGAGGATTGA...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCTCTGGTTTCTGGAGTTGGCCCTGACTACAGAAGCTGGATAAAGATGGTAGTCCGCCCACTTCAGTaGAAGTGGCAGGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RPLVSGVGPDYRSWIKMVVRPLQ*KWQEAG Trigger: TCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGAC...TACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGAATGAGGTTGCCCCGTTGCTGGCATGTCAGGGTAGCAAAGCCGCTCACTTGCAACAGCCAGCTTaGAGATCTTCATTCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: TRNEVAPLLACQGSKAAHLQQPA*RSSFLM Trigger: CATCAAGAATGAAGATCTCCAAGCTGGCTGTTGCAA...GTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGAGGAAGCTGCCATCATaGCTTAAACATCTAAAACCT | + |
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Preference number: 2 (lower is better) Translates to: GRKQEGRQELVLSGWAAMRKLPS*LKHLKP Trigger: AGGTTTTAGATGTTTAAGCCATGATGGCAGCTTCCT...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGCCTGACTACAGAAGCTaGATAAAGATGGTACTCGTT | + |
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Preference number: 2 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSPDYRS*IKMVLV Trigger: AACGAGTACCATCTTTATCCAGCTTCTGTAGTCAGG...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| 3UTR-3UTR TCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCGGGGGCAGAAAGTCATaGCTTACAATACAGTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RHTHTHTHTHTHTQNQACGGRKS*LTIQCC Trigger: GCAGCACTGTATTGTAAGTCATGACTTTCTGCCCCC...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACGAGCAGCTTCCCTGTTaGAGTAGATCCAAGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHEQLPC*SRSKLS Trigger: AGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTC...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGCTGAGTTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACTCAATCCTCACCAGATaGACCTTCAAACACCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: ASAELCETQCLLTCAFQHSILTR*TFKHPV Trigger: TACTGGGTGTTTGAAGGTGCATCTGGTGAGGATTGA...GTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCTGCTTGGGGACACAAGCTTATGGGGATGTGGCATTCTAACAGAGCCTGCAAGGAAGCTGCCATCATaGCTTAAACATCTAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: ALLGDTSLWGCGILTEPARKLPS*LKHLKP Trigger: AGGTTTTAGATGTTTAAGCCATGATGGCAGCTTCCT...TGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGAGGAAGCTGCCATCATaGCTTAAACATCTAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: HVRVAKPLTASAELCETQRKLPS*LKHLKP Trigger: AGGTTTTAGATGTTTAAGCCATGATGGCAGCTTCCT...CTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACCCAGGGGTAGATTTGCAACAGCCAGCTTaGAGATCTTCATTCTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: LCETQCLLTCAFQHPGVDLQQPA*RSSFLM Trigger: CATCAAGAATGAAGATCTCCAAGCTGGCTGTTGCAA...ATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACCTCTGGTTTCTGGAGTTGGCCCTGACTACAGAAGCTGGATAAAGATGGTAAGGGAACCCACAACCTaGAGAATTAACAACTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RPLVSGVGPDYRSWIKMVREPTT*RINNWP Trigger: AGGCCAGTTGTTAATTCTTCAGGTTGTGGGTTCCCT...TACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCTCCTTCCTGACATTATaGAATTGGGGGCAGAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RHTHTHTHTHTHTQNQACSFLTL*NWGQKV Trigger: GACTTTCTGCCCCCAATTTCATAATGTCAGGAAGGA...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCAAATCCAAGCCCACATaGGGAAGAGCACTTCTATAC | + |
|
Preference number: 2 (lower is better) Translates to: RHTHTHTHTHTHTQNQACKSKPT*GRALLY Trigger: GTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTT...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACCTCTGGTTTCTGGAGTTGGCCCTGACTACAGAAGCTGGATAAAGATGGTATTAGCAGCATTTCTGTaGCCATCCTTCAGTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RPLVSGVGPDYRSWIKMVLAAFL*PSFSPV Trigger: CACAGGACTGAAGGATGGCCACAGAAATGCTGCTAA...TACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CAA 90 bp | TTTTTGTTTATTTCAAAGATGCATAGAGATGAACCAGGAATGAGGTaGCCCCGTTGCTGGCATGTCAGGGTAGCAAAGCCGCTCACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLFISKMHRDEPGMR*PRCWHVRVAKPLTA Trigger: AGCAGTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGTTCATCTCTATGCATCTTTGAAATAAACAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCTACGTCTCTCCAAACTaGTGGCATTTTTGTGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: RHTHTHTHTHTHTQNQACYVSPN*WHFCVS Trigger: ACTGACACAAAAATGCCATCAGTTTGGAGAGACGTA...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACAGTGTAATCAGAAGCTACTGGCCATTCTCAATGAGCCCAGGGTAAAGCAACATGCCCCTGAGCTGTaGGCATTCACTGTTTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: KQCNQKLLAILNEPRVKQHAPEL*AFTVST Trigger: TGTTGAAACAGTGAATGCCCACAGCTCAGGGGCATG...TTGCTTTACCCTGGGCTCATTGAGAATGGCCAGTAGCTTCTGATTACACTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | CACGCACATACGTCTCTCCAAACTGATGGCATTTTTGTGTCAGTCTCTCTCTCTAAGCTTATGGGGATGTaGCATTCTAACAGAGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HAHTSLQTDGIFVSVSLSKLMGM*HSNRAC Trigger: GCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTT...AGAGAGAGAGACTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CAA 90 bp | CTCCTTGGGATATATTTGTACTATCTCAGCGCTATTCCTAACCCCTaGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LLGIYLYYLSAIPNP*LLISLPVHTNPSPH Trigger: ATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTTAGGAATAGCGCTGAGATAGTACAAATATATCCCAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACAGTGTAATCAGAAGCTACTGGCCATTCTCAATGAGCCCAGGGTAAAGCAATCTCTCTCTCCTTCCTaGCATTATGAAATTGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KQCNQKLLAILNEPRVKQSLSPS*HYEIGG Trigger: GCCCCCAATTTCATAATGTCAGGAAGGAGAGAGAGA...TTGCTTTACCCTGGGCTCATTGAGAATGGCCAGTAGCTTCTGATTACACTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATTCAATCCTCACCAGATaGACCTTCAAACACCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KDTHTHTHTHTHTRKIRHSILTR*TFKHPV Trigger: TACTGGGTGTTTGAAGGTGCATCTGGTGAGGATTGA...ATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACAAGCTTATGGGGATGTaGCATTCTAACAGAGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ASSPLFFHGDVLAHQVLNKLMGM*HSNRAC Trigger: GCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTT...GTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGCCTTATATTACAAAGTCTGAGAAATGAACCTTTGCAACAGCCAGCTTGGGAGCAGCTTCCCTGTTaGAGTAGATCCAAGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: NSLILQSLRNEPLQQPAWEQLPC*SRSKLS Trigger: AGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTC...CCAAGCTGGCTGTTGCAAAGGTTCATTTCTCAGACTTTGTAATATAAGGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTGACATTATGAAATTGGGGGCAGAAAGTCATGACTTACAATACAGTGCTGAGCAGCTTCCCTGTTaGAGTAGATCCAAGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPDIMKLGAESHDLQYSAEQLPC*SRSKLS Trigger: AGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTC...AGCACTGTATTGTAAGTCATGACTTTCTGCCCCCAATTTCATAATGTCAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTGACATTATGAAATTGGGGGCAGAAAGTCATGACTTACAATACAGTGCTAGGGAACCCACAACCTaGAGAATTAACAACTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LPDIMKLGAESHDLQYSAREPTT*RINNWP Trigger: AGGCCAGTTGTTAATTCTTCAGGTTGTGGGTTCCCT...AGCACTGTATTGTAAGTCATGACTTTCTGCCCCCAATTTCATAATGTCAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACATCTTTTAGCAGCATTTCTGTaGCCATCCTTCAGTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSFVLPRRRFSTSSFEHLLAAFL*PSFSPV Trigger: CACAGGACTGAAGGATGGCCACAGAAATGCTGCTAA...AAGATGTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATAGGAAGCTGCCATCATaGCTTAAACATCTAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: KDTHTHTHTHTHTRKIRHRKLPS*LKHLKP Trigger: AGGTTTTAGATGTTTAAGCCATGATGGCAGCTTCCT...ATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAGCCTTATATTACAAAGTCTGAGAAATGAACCTTTGCAACAGCCAGCTTGGACAAGAAGCCCAACTTaGCAAAGGAAACCAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: NSLILQSLRNEPLQQPAWTRSPT*QRKPAT Trigger: TGTTGCTGGTTTCCTTTGTCAAGTTGGGCTTCTTGT...CCAAGCTGGCTGTTGCAAAGGTTCATTTCTCAGACTTTGTAATATAAGGCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTTTAGCAGCATTTCTGTaGCCATCCTTCAGTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFLAAFL*PSFSPV Trigger: CACAGGACTGAAGGATGGCCACAGAAATGCTGCTAA...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | GCTTCCCAGGCCCTAGGCAGGCAGAGACAACAGTTATaGAAGCGGAGTGCGCCTGCTCAGTGCTCCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ASQALGRQRQQL*KRSAPAQCSQE Trigger: CTCCTGGGAGCACTGAGCAGGCGCACTCCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCCTGGGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | CCTAGGCAGGCAGAGACAACAGTTATGCAAGCGGAGTaGGCCTGCTCAGTGCTCCCAGGAGATCCCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PRQAETTVMQAE*ACSVLPGDPRS Trigger: GCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTCCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGTCCAAGAATCCTCCCTaGTGTGGGCAAGAGGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGSKNPP*CGQEGE Trigger: CTCACCCTCTTGCCCACACAAGGGAGGATTCTTGGA...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | AAGCTCCAAGAATCCTCCCTTGTGTGGGCAAGAGGGTaGGCCCACGTCTCCATCAGCCTGGGCAAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KLQESSLVWARG*AHVSISLGKPL Trigger: CAAAGGCTTGCCCAGGCTGATGGAGACGTGGGCTCACCCTCTTGCCCACACAAGGGAGGATTCTTGGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | AGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTaGAGTAGATCCAAGCTGTCTGGGGACACAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SAPRRSQEQLPC*SRSKLSGDTGR Trigger: CCTTCCTGTGTCCCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | AGACAACAGTTATGCAAGCGGAGTGCGCCTGCTCAGTaGTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RQQLCKRSAPAQ*SQEIPGAASLL Trigger: CAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTCCGCTTGCATAACTGTTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTGCACTCGGCCCTGCTaGGGGACACAAGCTTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SGNASPERLPLLCSSTETCTRPC*GTQAYG Trigger: CCCATAAGCTTGTGTCCCCAAGCAGGGCCGAGTGCA...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | CCGCTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGTaGTTGCTTACCTGTGCCTTCCAACACCCAGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PLTASAELCETQ*LLTCAFQHPGV Trigger: TACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CAACAACCCTACGTGCAGGTCAACACTTGTGTGTTCTaGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QQPYVQVNTCVF*DSSEHAPELWA Trigger: TGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAGTGTTGACCTGCACGTAGGGTTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGAAGGCTTCCTCTCCTTaGTTCTTCCACGGAGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGKASSP*FFHGDV Trigger: AACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTT...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | TGTAAAGTTCTTGGAGGTCCTGGGACACTGAGAGTGTaGATACCCTCGCATGTGGCGGGTACAGTGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CKVLGGPGTLRV*IPSHVAGTVAA Trigger: GGCTGCCACTGTACCCGCCACATGCGAGGGTATTCACACTCTCAGTGTCCCAGGACCTCCAAGAACTTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | TTGGTTCATGTGAGGCCAAGTCAGGCCAGTGGGGAATaGAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: LVHVRPSQASGE*SFSASGCAVSR Trigger: TCGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTTGGCCTCACATGAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | GTGCTGCACTCGGCCCTGCTTGGGGACACAAGCTTATaGGGATGTGGCATTCTAACAGAGCCTGCAACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLHSALLGDTSL*GCGILTEPATD Trigger: ATCAGTTGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGCCGAGTGCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | ATGCATAGAGATGAACCAGGAATGAGGTTGCCCCGTTaGTGGCATGTCAGGGTAGCAAAGCCGCTCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MHRDEPGMRLPR*WHVRVAKPLTA Trigger: AGCAGTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGTTCATCTCTATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | AGGCTGAGGGTGAGTGGATTCTATGCCGAAGACCTCTaGTTTCTGGAGTTGGCCCTGACTACAGAAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLRVSGFYAEDL*FLELALTTEAG Trigger: TCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCTTCGGCATAGAATCCACTCACCCTCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CATAGAGATGAACCAGGAATGAGGTTGCCCCGTTGCTaGCATGTCAGGGTAGCAAAGCCGCTCACTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HRDEPGMRLPRC*HVRVAKPLTAS Trigger: TGAAGCAGTGAGCGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGTTCATCTCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGTACAAGAAGCCCAACTaGACAAAGGAAACCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GRKQEGRQELVLSGWAAMYKKPN*TKETSN Trigger: GTTGCTGGTTTCCTTTGTCAAGTTGGGCTTCTTGTA...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGCCTGACATTATGAAATaGGGGGCAGAAAGTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGPDIMK*GAESHD Trigger: GTCATGACTTTCTGCCCCCAATTTCATAATGTCAGG...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | AGGAGACTTGTAAAGTTCTTGGAGGTCCTGGGACACTaGGAGTGTGAATACCCTCGCATGTGGCGGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RRLVKFLEVLGH*ECEYPRMWRVQ Trigger: CTGTACCCGCCACATGCGAGGGTATTCACACTCTCAGTGTCCCAGGACCTCCAAGAACTTTACAAGTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | AAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTaGGCAGCGATGGGTATGATTCACAAGCTCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KQEGRQELVLSG*AAMGMIHKLHR Trigger: TCTGTGGAGCTTGTGAATCATACCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGAAACTGATGGCATTTTaGTGTCAGTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGKLMAF*CQSLSL Trigger: GAGAGAGAGAGACTGACACAAAAATGCCATCAGTTT...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGTAATCAGAAGCTACTGGCCATTCTCAATGAGCCCAGGGTAAAGCAATGCACTCGGCCCTGCTaGGGGACACAAGCTTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KQCNQKLLAILNEPRVKQCTRPC*GTQAYG Trigger: CCCATAAGCTTGTGTCCCCAAGCAGGGCCGAGTGCA...TTGCTTTACCCTGGGCTCATTGAGAATGGCCAGTAGCTTCTGATTACACTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGCCTGACATTATGAAATaGGGGGCAGAAAGTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: HVRVAKPLTASAELCETQPDIMK*GAESHD Trigger: GTCATGACTTTCTGCCCCCAATTTCATAATGTCAGG...CTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | GGCTGTGCTGTCTCTCGAGACAAGGAGTGTCCTGTCTaGATACGCAAGAATACCCCCAAACAGTGTAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: GCAVSRDKECPV*IRKNTPKQCNY Trigger: GTAGTTACACTGTTTGGGGGTATTCTTGCGTATGCAGACAGGACACTCCTTGTCTCGAGAGACAGCACAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CATGACTTACAATACAGTGCTGCACTCGGCCCTGCTTaGGGACACAAGCTTATGGGGATGTGGCATTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: HDLQYSAALGPA*GHKLMGMWHSN Trigger: GTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGCCGAGTGCAGCACTGTATTGTAAGTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | AGTCCTGTGTTCCAGGCTACTACAAGAAGCCCAACTTaGCAAAGGAAACCAGCAACAACCCTACGTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPVFQATTRSPT*QRKPATTLRAG Trigger: ACCTGCACGTAGGGTTGTTGCTGGTTTCCTTTGTCAAGTTGGGCTTCTTGTAGTAGCCTGGAACACAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | CAGGCATGCTCTGCACGCACATACGTCTCTCCAAACTaGTGGCATTTTTGTGTCAGTCTCTCTCTCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QACSARTYVSPN*WHFCVSLSLSP Trigger: AGGAGAGAGAGAGAGACTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTGCAGAGCATGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTaGGCCTGTCACTTTATAATTTGGGGTGGCGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLSLSLSLS*ACHFIIWGGVQ Trigger: CTGTACGCCACCCCAAATTATAAAGTGACAGGCCCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGTAATCAGAAGCTACTGGCCATTCTCAATGAGCCCAGGGTAAAGCAATCCAAGAATCCTCCCTaGTGTGGGCAAGAGGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KQCNQKLLAILNEPRVKQSKNPP*CGQEGE Trigger: CTCACCCTCTTGCCCACACAAGGGAGGATTCTTGGA...TTGCTTTACCCTGGGCTCATTGAGAATGGCCAGTAGCTTCTGATTACACTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACCCAGGGGTAGATAAACTGATGGCATTTTaGTGTCAGTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCETQCLLTCAFQHPGVDKLMAF*CQSLSL Trigger: GAGAGAGAGAGACTGACACAAAAATGCCATCAGTTT...ATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCAGCTGAGTTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACTTTGCAACAGCCAGCTaGGAGATCTTCATTCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASAELCETQCLLTCAFQHFATAS*EIFILD Trigger: ATCAAGAATGAAGATCTCCAAGCTGGCTGTTGCAAA...GTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | TCACACGCCCCATCGGCAGAAATGCTCTCTACGATGTaGAATCTGAAGTCTTTGGTTCATGTGAGGCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SHAPSAEMLSTM*NLKSLVHVRPS Trigger: ACTTGGCCTCACATGAACCAAAGACTTCAGATTTCACATCGTAGAGAGCATTTCTGCCGATGGGGCGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | ACACACACACACACACACGCAAAATCAGGCATGCTCTaGACGCACATACGTCTCTCCAAACTGATGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHAKSGML*THIRLSKLMAF Trigger: AAATGCCATCAGTTTGGAGAGACGTATGTGCGTGCAGAGCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CATTTCCCTCCCAGTACACACAAATCCAAGCCCACATaGGGAAGAGCACTTCTATACCTCACAAGGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: HFPPSTHKSKPT*GRALLYLTRQT Trigger: AGTTTGCCTTGTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | TCTATGCCGAAGACCTCTGGTTTCTGGAGTTGGCCCTaGCTACAGAAGCTGGATAAAGATGGTACTCGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SMPKTSGFWSWP*LQKLDKDGTRL Trigger: TAAACGAGTACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCTTCGGCATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CCTCTGGTTTCTGGAGTTGGCCCTGACTACAGAAGCTaGATAAAGATGGTACTCGTTTATGACGAGGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLVSGVGPDYRS*IKMVLVYDEDL Trigger: AAGATCCTCGTCATAAACGAGTACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CTGGGCAAGCCTTTGTCTCTAAGGAAGCTGCCATCATaGCTTAAACATCTAAAACCTGACACATCTGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGKPLSLRKLPS*LKHLKPDTSDP Trigger: AGGATCAGATGTGTCAGGTTTTAGATGTTTAAGCCATGATGGCAGCTTCCTTAGAGACAAAGGCTTGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGTAATCAGAAGCTACTGGCCATTCTCAATGAGCCCAGGGTAAAGCAATACAAGAAGCCCAACTaGACAAAGGAAACCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KQCNQKLLAILNEPRVKQYKKPN*TKETSN Trigger: GTTGCTGGTTTCCTTTGTCAAGTTGGGCTTCTTGTA...TTGCTTTACCCTGGGCTCATTGAGAATGGCCAGTAGCTTCTGATTACACTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | GGCCAATCAGCATGCCCAGAACATCTCTGTCTGCTCTaGCATGACCACACTTCATTAGTTTTAACTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GQSACPEHLCLL*HDHTSLVLTYR Trigger: TCTGTAAGTTAAAACTAATGAAGTGTGGTCATGTCAGAGCAGACAGAGATGTTCTGGGCATGCTGATTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | CTGGCCATTCTCAATGAGCCCAGGGTAAAGCAAGAATaGACTGCAGCCACAGTGAAAATCCTAAGTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LAILNEPRVKQE*TAATVKILSLF Trigger: AAATAAACTTAGGATTTTCACTGTGGCTGCAGTCCATTCTTGCTTTACCCTGGGCTCATTGAGAATGGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATAAAGGCCTTCACTCCTaGGGATATATTTGTACTATC | + |
|
Preference number: 3 (lower is better) Translates to: KDTHTHTHTHTHTRKIRHKGLHS*GYICTI Trigger: GATAGTACAAATATATCCCAAGGAGTGAAGGCCTTT...ATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | GCTTGGAGATCTTCATTCTTGATGATATTTTACAGATaGTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AWRSSFLMIFYR*SRSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGCATCTGTAAAATATCATCAAGAATGAAGATCTCCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR CCA 72 bp | ACACCCGTAAAGAACAGAGTCTCCGAGCGCTCATCTTaGTTAAAAGATTTGGTTGTACTTAGAGCCTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: TPVKNRVSERSS*LKDLVVLRAFM Trigger: CATAAAGGCTCTAAGTACAACCAAATCTTTTAACCAAGATGAGCGCTCGGAGACTCTGTTCTTTACGGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCCTTATATTACAAAGTCTGAGAAATGAACCTTTGCAACAGCCAGCTTGGCCTGACATTATGAAATaGGGGGCAGAAAGTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: NSLILQSLRNEPLQQPAWPDIMK*GAESHD Trigger: GTCATGACTTTCTGCCCCCAATTTCATAATGTCAGG...CCAAGCTGGCTGTTGCAAAGGTTCATTTCTCAGACTTTGTAATATAAGGCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| 3UTR TCA 72 bp | TTGTGTCAGTCTCTCTCTCTCTCCTTCCTGACATTATaGAATTGGGGGCAGAAAGTCATGACTTACAATACA | + |
|
Preference number: 3 (lower is better) Translates to: LCQSLSLSFLTL*NWGQKVMTYNT Trigger: TGTATTGTAAGTCATGACTTTCTGCCCCCAATTTCATAATGTCAGGAAGGAGAGAGAGAGAGACTGACACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR GCA 72 bp | TATATTTGTACTATCTCAGCGCTATTCCTAACCCCTTaGTTCTCATTTCCCTCCCAGTACACACAAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YICTISALFLTP*FSFPSQYTQIQ Trigger: TTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTTAGGAATAGCGCTGAGATAGTACAAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGCGCCTGCTCAGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGGCGGGAGCTCCAGGTaGACCTGGCAGAGAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECACSVLPGDPRSSFPVAGGSSR*TWQRTA Trigger: AGCCGTTCTCTGCCAGGTGCACCTGGAGCTCCCGCC...TGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGGCGGGAGCTCCAGGTaGACCTGGCAGAGAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGGGSSR*TWQRTA Trigger: AGCCGTTCTCTGCCAGGTGCACCTGGAGCTCCCGCC...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGCGCCTGCTCAGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAAGCTCCAGGTGCACCTaGCAGAGAACGGCTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECACSVLPGDPRSSFPVASSRCT*QRTASP Trigger: AGGGGAAGCCGTTCTCTGCCAGGTGCACCTGGAGCT...TGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGTCGGGCCCCTTCCTTTaGCCTGGGTCTGCCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGSGPFL*PGSAEL Trigger: CAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGA...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | CATGTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGCGGGGAGCTCAGCCCTaGGTCCCCATCTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVRVAKPLTASAELCETQRGAQP*VPICSR Trigger: CCTGCTGCAGATGGGGACCCAGGGCTGAGCTCCCCG...CTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGAGCTCCAGACACTCGTaGCAGATGGACAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVPSAHFSGSGRKQEGRQSSRHS*QMDRWS Trigger: GCTCCACCTGTCCATCTGTCACGAGTGTCTGGAGCT...CTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGGAAAGCCACCCAACGTaGAGGGGGAAGACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGESHPT*RGKTGP Trigger: TGGGCCTGTCTTCCCCCTTCACGTTGGGTGGCTTTC...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGAGGCTTCTGGGTCAGTaGCCACAGGCATGGAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SVPSAHFSGSGRKQEGRQRLLGQ*PQAWKT Trigger: CGTCTTCCATGCCTGTGGTCACTGACCCAGAAGCCT...CTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGCAGGAACCTGTGGTaGGTCACAGCTCAGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRKQEGRQELVLSGWAAMGRNLW*VTAQTE Trigger: CTCGGTCTGAGCTGTGACGCACCACAGGTTCCTGCC...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGCGGGGAGCTCAGCCCTaGGTCCCCATCTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNASPERLPLLCSSTETRGAQP*VPICSR Trigger: CCTGCTGCAGATGGGGACCCAGGGCTGAGCTCCCCG...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGCCTCTGTCCCAGTTGTaGCCTCAGGGGGATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGDPRSSFPVAVDPSCLGPLSQL*PQGDED Trigger: GTCTTCATCCCCCTGAGGTCACAACTGGGACAGAGG...CCCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGCCTTCAGGATCTGTGTaGCTCCCGAGCCACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRKQEGRQELVLSGWAAMPSGSV*LPSHCM Trigger: CATGCAGTGGCTCGGGAGGCACACAGATCCTGAAGG...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGCGGGGAGCTCAGCCCTaGGTCCCCATCTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGRGAQP*VPICSR Trigger: CCTGCTGCAGATGGGGACCCAGGGCTGAGCTCCCCG...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGCGCCTGCTCAGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAATCACAGGGAAGGTCTaGAATGTTCTCCGCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: ECACSVLPGDPRSSFPVAITGKV*NVLRRR Trigger: GCGTCTGCGGAGAACATTCCAGACCTTCCCTGTGAT...TGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGAGCTCCAGGTGCACCTaGCAGAGAACGGCTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLSSRCT*QRTASP Trigger: AGGGGAAGCCGTTCTCTGCCAGGTGCACCTGGAGCT...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGGAAGGAGTTGCCATCTaGATGCACCGTCACAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPSAHFSGSGRKQEGRQEGVAI*MHRHNP Trigger: GGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTC...CTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGCTGAGTTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACATGGACAGGTGGAGCTaGCAGAGCTCCGGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASAELCETQCLLTCAFQHMDRWS*QSSGEL Trigger: GAGCTCCCCGGAGCTCTGTCAGCTCCACCTGTCCAT...GTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGATGGACAGGTGGAGCTaGCAGAGCTCCGGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNASPERLPLLCSSTETMDRWS*QSSGEL Trigger: GAGCTCCCCGGAGCTCTGTCAGCTCCACCTGTCCAT...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGTCGCTTGGGCACGATaGGGTTTCTCAGCATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGVAWAR*GFSACR Trigger: TCGACATGCTGAGAAACCTCATCGTGCCCAAGCGAC...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCGGCGGGAGCTCCAGGTaGACCTGGCAGAGAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSFPSQYTQIQAHMGKSGGSSR*TWQRTA Trigger: AGCCGTTCTCTGCCAGGTGCACCTGGAGCTCCCGCC...GCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGGAACATCACAGGGAAGGTCTaGAATGTTCTCCGCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: FRPPTSVEVAGSRRADRNITGKV*NVLRRR Trigger: GCGTCTGCGGAGAACATTCCAGACCTTCCCTGTGAT...GTTCCTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGTGTGCTGTATGTCTTTaGGGATGGGGTCCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKQEGRQELVLSGWAAMCAVCL*GWGPCW Trigger: CCAGCAGGGACCCCATCCCCAAAGACATACAGCACA...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS-3UTR CCA 90 bp | AGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCCGGGAAGACGCGGCCGCCCTaGCTCAGGCACACGCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RCTFKHPVKPHICVPNPGKTRPP*LRHTRA Trigger: CGCGCGCGTGTGCCTGAGCCAGGGCGGCCGCGTCTT...CCCGGGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGGTGACCTCAGGGGGATaGAGACCAGCAGAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAPRRSQEQLPCCSRSKLVTSGG*RPAEWK Trigger: TTTCCACTCTGCTGGTCTTCATCCCCCTGAGGTCAC...CAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTGCTTGGGGACACAAGCTTATGGGGATGTGGCATTCTAACAGAGCCTGCACTTCACCGGCGGCCTTaGAATCACCTTGGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGDTSLWGCGILTEPALHRRP*NHLGQH Trigger: ATGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAG...TGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGTCGGGCCCCTTCCTTTaGCCTGGGTCTGCCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGSGPFL*PGSAEL Trigger: CAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGA...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGACACTCGTGACAGATaGACAGGTGGAGCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGDTRDR*TGGADR Trigger: TCTGTCAGCTCCACCTGTCCATCTGTCACGAGTGTC...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGCATCCAGGAGACTCATaGTGGTGGAGGTCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKQEGRQELVLSGWAAMHPGDS*WWRSLL Trigger: CAGAAGTGACCTCCACCACCATGAGTCTCCTGGATG...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGAGCTCCAGACACTCGTaGCAGATGGACAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGNASPERLPLLCSSTETSSRHS*QMDRWS Trigger: GCTCCACCTGTCCATCTGTCACGAGTGTCTGGAGCT...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACCCAGGGGTAGATAGGCTTCTGGGTCAGTaGCCACAGGCATGGAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LCETQCLLTCAFQHPGVDRLLGQ*PQAWKT Trigger: CGTCTTCCATGCCTGTGGTCACTGACCCAGAAGCCT...ATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACCCAGGGGTAGATCTTCACCGGCGGCCTTaGAATCACCTTGGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCETQCLLTCAFQHPGVDLHRRP*NHLGQH Trigger: ATGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAG...ATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTCTGGTTTCTGGAGTTGGCCCTGACTACAGAAGCTGGATAAAGATGGTAGGTGGCCCTGGAGCCTaGCCAAGCTCGGGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLVSGVGPDYRSWIKMVGGPGA*PSSGLL Trigger: AAGAAGGCCCGAGCTTGGGCAGGCTCCAGGGCCACC...TACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGGAACGGTGGAGGTCACTTCTaGAAACAGAATCACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRPPTSVEVAGSRRADRNGGGHF*KQNHFP Trigger: GGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACC...GTTCCTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCTCGGGCCCCTTCCTTTaGCCTGGGTCTGCCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQNQACSGPFL*PGSAEL Trigger: CAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGA...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CAA 72 bp | GTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTaGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRVAKPLTASAE*CETQCLLTCAF Trigger: GAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCAGGCTTCTGGGTCAGTaGCCACAGGCATGGAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: CFSFPSQYTQIQAHMGKSRLLGQ*PQAWKT Trigger: CGTCTTCCATGCCTGTGGTCACTGACCCAGAAGCCT...GCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS-3UTR TCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGATAGGTCTCTAGGCTaGAGTGCTCTGATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKQEGRQELVLSGWAAMDRSLG*SALMKR Trigger: CCTTTTCATCAGAGCACTTCAGCCTAGAGACCTATC...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS-3UTR TCA 90 bp | TTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACCCAGGGGTAGATGTCGCTTGGGCACGATaGGGTTTCTCAGCATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LCETQCLLTCAFQHPGVDVAWAR*GFSACR Trigger: TCGACATGCTGAGAAACCTCATCGTGCCCAAGCGAC...ATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| CDS-3UTR GCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCGGCAGGAACCTGTGGTaGGTCACAGCTCAGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQNQACGRNLW*VTAQTE Trigger: CTCGGTCTGAGCTGTGACGCACCACAGGTTCCTGCC...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGGTGGAGGTCACTTCTaGAAACAGAATCACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGGGGHF*KQNHFP Trigger: GGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACC...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS-3UTR GCA 90 bp | CCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGGGTGGAGGTCACTTCTaGAAACAGAATCACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGDPRSSFPVAVDPSCLGGGGHF*KQNHFP Trigger: GGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACC...CCCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS-3UTR CCA 90 bp | CATGTCAGGGTAGCAAAGCCGCTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGGACACTCGTGACAGATaGACAGGTGGAGCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVRVAKPLTASAELCETQDTRDR*TGGADR Trigger: TCTGTCAGCTCCACCTGTCCATCTGTCACGAGTGTC...CTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGCTTTGCTACCCTGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCATTAGCTTCCCAGGCCCTAGGCAGGCAGAGACAACAGTTATGCAAGCGGGACACTCGTGACAGATaGACAGGTGGAGCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SALASQALGRQRQQLCKRDTRDR*TGGADR Trigger: TCTGTCAGCTCCACCTGTCCATCTGTCACGAGTGTC...CCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCCTGGGAAGCTAATGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGGAAGGAGTTGCCATCTaGATGCACCGTCACAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGNASPERLPLLCSSTETEGVAI*MHRHNP Trigger: GGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTC...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| 3UTR CAA 72 bp | CTCACTGCTTCAGCTGAGTTGTGTGAGACCCAGTGCTaGCTTACCTGTGCCTTCCAACACCCAGGGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTASAELCETQC*LTCAFQHPGVD Trigger: ATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGCAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
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| CDS-3UTR TCA 90 bp | AGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCCGGGGGCCAGCATGCTCCATaGCACCTTGTGCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCTFKHPVKPHICVPNPGGQHAP*HLVQAG Trigger: CCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCC...CCCGGGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACAGCTCCAGACACTCGTaGCAGATGGACAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHSSRHS*QMDRWS Trigger: GCTCCACCTGTCCATCTGTCACGAGTGTCTGGAGCT...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS-3UTR TCA 90 bp | AGACCTCTGGTTTCTGGAGTTGGCCCTGACTACAGAAGCTGGATAAAGATGGTAGAAAGCCACCCAACGTaGAGGGGGAAGACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPLVSGVGPDYRSWIKMVESHPT*RGKTGP Trigger: TGGGCCTGTCTTCCCCCTTCACGTTGGGTGGCTTTC...TACCATCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCTAACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCAGAAAGCCACCCAACGTaGAGGGGGAAGACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPNPLLLISLPVHTNPSPESHPT*RGKTGP Trigger: TGGGCCTGTCTTCCCCCTTCACGTTGGGTGGCTTTC...TGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTTAGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGGATAGGTCTCTAGGCTaGAGTGCTCTGATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSDRSLG*SALMKR Trigger: CCTTTTCATCAGAGCACTTCAGCCTAGAGACCTATC...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCCCTCTGTCCCAGTTGTaGCCTCAGGGGGATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQNQACPLSQL*PQGDED Trigger: GTCTTCATCCCCCTGAGGTCACAACTGGGACAGAGG...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACCCTCTGTCCCAGTTGTaGCCTCAGGGGGATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHPLSQL*PQGDED Trigger: GTCTTCATCCCCCTGAGGTCACAACTGGGACAGAGG...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGTTCTCCCATAAGTGTTaGATTAACCAGAACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGFSHKC*INQNPT Trigger: GGTGGGGTTCTGGTTAATTCAACACTTATGGGAGAA...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCGTCGCTTGGGCACGATaGGGTTTCTCAGCATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CFSFPSQYTQIQAHMGKSVAWAR*GFSACR Trigger: TCGACATGCTGAGAAACCTCATCGTGCCCAAGCGAC...GCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACCTTCACCGGCGGCCTTaGAATCACCTTGGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHLHRRP*NHLGQH Trigger: ATGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAG...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGGGTGGAGGTCACTTCTaGAAACAGAATCACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLGGGHF*KQNHFP Trigger: GGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACC...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGTTCAGGCCCGCCCCGTaGTGCTTATTGTGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGFRPAP*CLLCSS Trigger: CGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAA...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCAGCTGAGTTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACGCATGTCGAAGGAGTTaGCATCTGGATGCACCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASAELCETQCLLTCAFQHACRRS*HLDAPS Trigger: TGACGGTGCATCCAGATGGCAACTCCTTCGACATGC...GTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGCATCCAGGAGACTCATaGTGGTGGAGGTCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGNASPERLPLLCSSTETHPGDS*WWRSLL Trigger: CAGAAGTGACCTCCACCACCATGAGTCTCCTGGATG...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGTCTGCCGAACTGCAATaGCAATTAAGCCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGSAELQ*QLSPFP Trigger: AGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGA...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCGAAGGAGTTGCCATCTaGATGCACCGTCACAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSFPSQYTQIQAHMGKSEGVAI*MHRHNP Trigger: GGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTC...GCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | AAACAGTGTAATCAGAAGCTACTGGCCATTCTCAATGAGCCCAGGGTAAAGCAAGGCCAGCATGCTCCATaGCACCTTGTGCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQCNQKLLAILNEPRVKQGQHAP*HLVQAG Trigger: CCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCC...TTGCTTTACCCTGGGCTCATTGAGAATGGCCAGTAGCTTCTGATTACACTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163193.9 |
||
| CDS-3UTR TCA 90 bp | GCCCTGCTTGGGGACACAAGCTTATGGGGATGTGGCATTCTAACAGAGCCTGCACCTTTCCCGAAATGTTaGCTCTCTTCCCTTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGDTSLWGCGILTEPAPFPKC*LSSLSV Trigger: AACGGAAAGGGAAGAGAGTCAACATTTCGGGAAAGG...TGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGGCTTGCTGGATTTTATaGTTCCTTCAGGATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGACWIL*FLQDLC Trigger: ACACAGATCCTGAAGGAATCATAAAATCCAGCAAGC...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGCTTGCTGGATTTTATaGTTCCTTCAGGATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRKQEGRQELVLSGWAAMACWIL*FLQDLC Trigger: ACACAGATCCTGAAGGAATCATAAAATCCAGCAAGC...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCGTGACCTCAGGGGGATaGAGACCAGCAGAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQNQACVTSGG*RPAEWK Trigger: TTTCCACTCTGCTGGTCTTCATCCCCCTGAGGTCAC...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGCCCCACCGATCTTCATaGGATCGCTGTAATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDPRSSFPVAVDPSCLGPHRSS*DRCNKY Trigger: ATATTTATTACAGCGATCTCATGAAGATCGGTGGGG...CCCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGGTGGCCCTGGAGCCTaGCCAAGCTCGGGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFGGPGA*PSSGLL Trigger: AAGAAGGCCCGAGCTTGGGCAGGCTCCAGGGCCACC...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | CACGCACATACGTCTCTCCAAACTGATGGCATTTTTGTGTCAGTCTCTCTCTCTGGCAGGAACCTGTGGTaGGTCACAGCTCAGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HAHTSLQTDGIFVSVSLSGRNLW*VTAQTE Trigger: CTCGGTCTGAGCTGTGACGCACCACAGGTTCCTGCC...AGAGAGAGAGACTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGGCCAAGGACATCAAATaGTGGACAAATGGAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLAKDIK*WTNGIL Trigger: GAGGATTCCATTTGTCCAGCATTTGATGTCCTTGGC...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCTTCAGGCCCGCCCCGTaGTGCTTATTGTGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQNQACFRPAP*CLLCSS Trigger: CGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAA...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGCATGTCGAAGGAGTTaGCATCTGGATGCACCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGACRRS*HLDAPS Trigger: TGACGGTGCATCCAGATGGCAACTCCTTCGACATGC...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACTGTGCTGTATGTCTTTaGGGATGGGGTCCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHCAVCL*GWGPCW Trigger: CCAGCAGGGACCCCATCCCCAAAGACATACAGCACA...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | AAAGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATAGCTCCAGGTGCACCTaGCAGAGAACGGCTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDTHTHTHTHTHTRKIRHSSRCT*QRTASP Trigger: AGGGGAAGCCGTTCTCTGCCAGGTGCACCTGGAGCT...ATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGAAGGACATCAAATGCTaGACAAATGGAATCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVPSAHFSGSGRKQEGRQKDIKC*TNGILC Trigger: ACAGAGGATTCCATTTGTCCAGCATTTGATGTCCTT...CTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCGAAGGAGTTGCCATCTaGATGCACCGTCACAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQNQACEGVAI*MHRHNP Trigger: GGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTC...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGGCTTGCTGGATTTTATaGTTCCTTCAGGATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSACWIL*FLQDLC Trigger: ACACAGATCCTGAAGGAATCATAAAATCCAGCAAGC...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGGATAGGTCTCTAGGCTaGAGTGCTCTGATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNASPERLPLLCSSTETDRSLG*SALMKR Trigger: CCTTTTCATCAGAGCACTTCAGCCTAGAGACCTATC...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGCCCCACCGATCTTCATaGGATCGCTGTAATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLPHRSS*DRCNKY Trigger: ATATTTATTACAGCGATCTCATGAAGATCGGTGGGG...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGTTCCAAAAGGCACGTaGACAATCATTTTATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKQEGRQELVLSGWAAMVPKGT*TIILSL Trigger: CAAGGATAAAATGATTGTGCACGTGCCTTTTGGAAC...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGATTAAGCCCATTTCCTaGGGCATCTCAAACATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLIKPIS*GISNIN Trigger: GTTGATGTTTGAGATGCCGCAGGAAATGGGCTTAAT...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGACTGAAACGATCTTCTaGGCTATCAGGCCGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGTETIF*AIRPLS Trigger: GGACAACGGCCTGATAGCCCAGAAGATCGTTTCAGT...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCATTAGCTTCCCAGGCCCTAGGCAGGCAGAGACAACAGTTATGCAAGCGGGAGAAAACCAAGTTCTaGACTGTGTTCCGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SALASQALGRQRQQLCKREKTKF*TVFRST Trigger: TGTGCTACGGAACACAGTCCAGAACTTGGTTTTCTC...CCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCCTGGGAAGCTAATGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACCATCCAGGAGACTCATaGTGGTGGAGGTCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHHPGDS*WWRSLL Trigger: CAGAAGTGACCTCCACCACCATGAGTCTCCTGGATG...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGAAGGACATCAAATGCTaGACAAATGGAATCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGKDIKC*TNGILC Trigger: ACAGAGGATTCCATTTGTCCAGCATTTGATGTCCTT...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACATCTTGGCCAGCATGCTCCATaGCACCTTGTGCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFVLPRRRFSTSSFEHLGQHAP*HLVQAG Trigger: CCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCC...AAGATGTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGCCTTTCCCGAAATGTTaGCTCTCTTCCCTTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGPFPKC*LSSLSV Trigger: AACGGAAAGGGAAGAGAGTCAACATTTCGGGAAAGG...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGGTTCCAAAAGGCACGTaGACAATCATTTTATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSVPKGT*TIILSL Trigger: CAAGGATAAAATGATTGTGCACGTGCCTTTTGGAAC...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| CDS-3UTR GCA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCCCTTCAGGATCTGTGTaGCTCCCGAGCCACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSPSGSV*LPSHCM Trigger: CATGCAGTGGCTCGGGAGGCACACAGATCCTGAAGG...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACATCTTTCGGGCCCCTTCCTTTaGCCTGGGTCTGCCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFVLPRRRFSTSSFEHLSGPFL*PGSAEL Trigger: CAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGA...AAGATGTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGGCCAAGGACATCAAATaGTGGACAAATGGAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNASPERLPLLCSSTETAKDIK*WTNGIL Trigger: GAGGATTCCATTTGTCCAGCATTTGATGTCCTTGGC...CGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCCGGGTTCAGGCCCGCCCCGTaGTGCTTATTGTGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCTFKHPVKPHICVPNPGFRPAP*CLLCSS Trigger: CGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAA...CCCGGGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCAGCTGAGTTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACGAGAAAACCAAGTTCTaGACTGTGTTCCGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASAELCETQCLLTCAFQHEKTKF*TVFRST Trigger: TGTGCTACGGAACACAGTCCAGAACTTGGTTTTCTC...GTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| 3UTR CAA 72 bp | ATTTCAAAGATGCATAGAGATGAACCAGGAATGAGGTaGCCCCGTTGCTGGCATGTCAGGGTAGCAAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ISKMHRDEPGMR*PRCWHVRVAKP Trigger: CGGCTTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGTTCATCTCTATGCATCTTTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCGTGACCTCAGGGGGATaGAGACCAGCAGAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSVTSGG*RPAEWK Trigger: TTTCCACTCTGCTGGTCTTCATCCCCCTGAGGTCAC...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACGTCGCTTGGGCACGATaGGGTTTCTCAGCATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSPLFFHGDVLAHQVLNVAWAR*GFSACR Trigger: TCGACATGCTGAGAAACCTCATCGTGCCCAAGCGAC...GTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTGCTTGGGGACACAAGCTTATGGGGATGTGGCATTCTAACAGAGCCTGCAGTTCCAAAAGGCACGTaGACAATCATTTTATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLGDTSLWGCGILTEPAVPKGT*TIILSL Trigger: CAAGGATAAAATGATTGTGCACGTGCCTTTTGGAAC...TGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTCCTTCAGGATCTGTGTaGCTCCCGAGCCACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFPSGSV*LPSHCM Trigger: CATGCAGTGGCTCGGGAGGCACACAGATCCTGAAGG...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACTTCAGGCCCGCCCCGTaGTGCTTATTGTGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASSPLFFHGDVLAHQVLNFRPAP*CLLCSS Trigger: CGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAA...GTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AAAGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCATGTCGAAGGAGTTaGCATCTGGATGCACCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDTHTHTHTHTHTRKIRHACRRS*HLDAPS Trigger: TGACGGTGCATCCAGATGGCAACTCCTTCGACATGC...ATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCCGGGGCCTTGCAATCACCTTaGCCAGCATGCTCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: RCTFKHPVKPHICVPNPGALQSP*PACSMT Trigger: TGTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGC...CCCGGGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCTGTGCTGTATGTCTTTaGGGATGGGGTCCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSCAVCL*GWGPCW Trigger: CCAGCAGGGACCCCATCCCCAAAGACATACAGCACA...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGTCTGCCGAACTGCAATaGCAATTAAGCCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGSAELQ*QLSPFP Trigger: AGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGA...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCTCTGCCGAACTGCAATaGCAATTAAGCCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSFPSQYTQIQAHMGKSSAELQ*QLSPFP Trigger: AGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGA...GCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCTTGGGGACACAAGCTTATGGGGATGTGGCATTCTAACAGAGCCTGCAAAGGACATCAAATGCTaGACAAATGGAATCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGDTSLWGCGILTEPAKDIKC*TNGILC Trigger: ACAGAGGATTCCATTTGTCCAGCATTTGATGTCCTT...TGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCTTGGGGACACAAGCTTATGGGGATGTGGCATTCTAACAGAGCCTGCATGTAATAAATATCGTTaGGCCACTTCACTCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGDTSLWGCGILTEPACNKYR*ATSLAS Trigger: ACTTGCGAGTGAAGTGGCCCAACGATATTTATTACA...TGCAGGCTCTGTTAGAATGCCACATCCCCATAAGCTTGTGTCCCCAAGCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CAA 72 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTaGGGCCTGTCACTTTATAATTTGGGGTGGCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSL*GLSLYNLGWRT Trigger: TGTACGCCACCCCAAATTATAAAGTGACAGGCCCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGACATTATGAAATTGGGGGCAGAAAGTCATGACTTACAATACAGTGCTAGGCTTCTGGGTCAGTaGCCACAGGCATGGAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LPDIMKLGAESHDLQYSARLLGQ*PQAWKT Trigger: CGTCTTCCATGCCTGTGGTCACTGACCCAGAAGCCT...AGCACTGTATTGTAAGTCATGACTTTCTGCCCCCAATTTCATAATGTCAGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGTGACCTCAGGGGGATaGAGACCAGCAGAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFVTSGG*RPAEWK Trigger: TTTCCACTCTGCTGGTCTTCATCCCCCTGAGGTCAC...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGCCCCACCGATCTTCATaGGATCGCTGTAATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGPHRSS*DRCNKY Trigger: ATATTTATTACAGCGATCTCATGAAGATCGGTGGGG...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AAACAGTGTAATCAGAAGCTACTGGCCATTCTCAATGAGCCCAGGGTAAAGCAAGCATGTCGAAGGAGTTaGCATCTGGATGCACCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQCNQKLLAILNEPRVKQACRRS*HLDAPS Trigger: TGACGGTGCATCCAGATGGCAACTCCTTCGACATGC...TTGCTTTACCCTGGGCTCATTGAGAATGGCCAGTAGCTTCTGATTACACTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCATCACAGGGAAGGTCTaGAATGTTCTCCGCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSITGKV*NVLRRR Trigger: GCGTCTGCGGAGAACATTCCAGACCTTCCCTGTGAT...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACGAGAAAACCAAGTTCTaGACTGTGTTCCGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHEKTKF*TVFRST Trigger: TGTGCTACGGAACACAGTCCAGAACTTGGTTTTCTC...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | AGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCCGGGCCTTTCCCGAAATGTTaGCTCTCTTCCCTTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RCTFKHPVKPHICVPNPGPFPKC*LSSLSV Trigger: AACGGAAAGGGAAGAGAGTCAACATTTCGGGAAAGG...CCCGGGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTCCTCTGTCCCAGTTGTaGCCTCAGGGGGATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFPLSQL*PQGDED Trigger: GTCTTCATCCCCCTGAGGTCACAACTGGGACAGAGG...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AGACACACACACACACACACACACACACACACACACACGCAAAATCAGGCATGCATTAAGCCCATTTCCTaGGGCATCTCAAACATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQNQACIKPIS*GISNIN Trigger: GTTGATGTTTGAGATGCCGCAGGAAATGGGCTTAAT...GCATGCCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACATTAAGCCCATTTCCTaGGGCATCTCAAACATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHIKPIS*GISNIN Trigger: GTTGATGTTTGAGATGCCGCAGGAAATGGGCTTAAT...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGAAGGACATCAAATGCTaGACAAATGGAATCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGKDIKC*TNGILC Trigger: ACAGAGGATTCCATTTGTCCAGCATTTGATGTCCTT...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGTGTAATAAATATCGTTaGGCCACTTCACTCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPLLLISLPVHTNPSPHGCNKYR*ATSLAS Trigger: ACTTGCGAGTGAAGTGGCCCAACGATATTTATTACA...CCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| 3UTR CAA 72 bp | ATCTGGAAACGCAAGCCCAGAAAGGCTTCCTCTCCTTaGTTCTTCCACGGAGACGTTTTAGCACATCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWKRKPRKASSP*FFHGDVLAHQV Trigger: AACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACGATAGGTCTCTAGGCTaGAGTGCTCTGATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSPLFFHGDVLAHQVLNDRSLG*SALMKR Trigger: CCTTTTCATCAGAGCACTTCAGCCTAGAGACCTATC...GTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTACTGAAACGATCTTCTaGGCTATCAGGCCGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFTETIF*AIRPLS Trigger: GGACAACGGCCTGATAGCCCAGAAGATCGTTTCAGT...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACATCTTGCCTTGCAATCACCTTaGCCAGCATGCTCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LSFVLPRRRFSTSSFEHLALQSP*PACSMT Trigger: TGTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGC...AAGATGTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| 3UTR CAA 72 bp | TGCACGCACATACGTCTCTCCAAACTGATGGCATTTTaGTGTCAGTCTCTCTCTCTCTCCTTCCTGACATTA | + |
|
Preference number: 4 (lower is better) Translates to: CTHIRLSKLMAF*CQSLSLSFLTL Trigger: TAATGTCAGGAAGGAGAGAGAGAGAGACTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CACGCACATACGTCTCTCCAAACTGATGGCATTTTTGTGTCAGTCTCTCTCTCTGCTTGCTGGATTTTATaGTTCCTTCAGGATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HAHTSLQTDGIFVSVSLSACWIL*FLQDLC Trigger: ACACAGATCCTGAAGGAATCATAAAATCCAGCAAGC...AGAGAGAGAGACTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACTTCTCCCATAAGTGTTaGATTAACCAGAACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPLFFHGDVLAHQVLNFSHKC*INQNPT Trigger: GGTGGGGTTCTGGTTAATTCAACACTTATGGGAGAA...GTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCGCCAAGGACATCAAATaGTGGACAAATGGAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSAKDIK*WTNGIL Trigger: GAGGATTCCATTTGTCCAGCATTTGATGTCCTTGGC...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTCATCCAGGAGACTCATaGTGGTGGAGGTCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFHPGDS*WWRSLL Trigger: CAGAAGTGACCTCCACCACCATGAGTCTCCTGGATG...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCCCCCACCGATCTTCATaGGATCGCTGTAATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSPHRSS*DRCNKY Trigger: ATATTTATTACAGCGATCTCATGAAGATCGGTGGGG...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTTTCTCCCATAAGTGTTaGATTAACCAGAACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFFSHKC*INQNPT Trigger: GGTGGGGTTCTGGTTAATTCAACACTTATGGGAGAA...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTACTGAAACGATCTTCTaGGCTATCAGGCCGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFTETIF*AIRPLS Trigger: GGACAACGGCCTGATAGCCCAGAAGATCGTTTCAGT...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACTGTAATAAATATCGTTaGGCCACTTCACTCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSPLFFHGDVLAHQVLNCNKYR*ATSLAS Trigger: ACTTGCGAGTGAAGTGGCCCAACGATATTTATTACA...GTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTTATATTACAAAGTCTGAGAAATGAACCTTTGCAACAGCCAGCTTGGATTAAGCCCATTTCCTaGGGCATCTCAAACATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSLILQSLRNEPLQQPAWIKPIS*GISNIN Trigger: GTTGATGTTTGAGATGCCGCAGGAAATGGGCTTAAT...CCAAGCTGGCTGTTGCAAAGGTTCATTTCTCAGACTTTGTAATATAAGGCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTGCCAAGGACATCAAATaGTGGACAAATGGAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFAKDIK*WTNGIL Trigger: GAGGATTCCATTTGTCCAGCATTTGATGTCCTTGGC...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTTCTGCCGAACTGCAATaGCAATTAAGCCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFSAELQ*QLSPFP Trigger: AGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGA...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACATCTTTGTAATAAATATCGTTaGGCCACTTCACTCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSFVLPRRRFSTSSFEHLCNKYR*ATSLAS Trigger: ACTTGCGAGTGAAGTGGCCCAACGATATTTATTACA...AAGATGTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS TCA 90 bp | GGCACACGCGCGCGTCCCTGGGCTGCGCGGCCGCGCGGCAGAAGGTaGAGGAGCAGCGCGAAGCACGCAGCCGCCGCACCGTGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTRARPWAARPRGRR*RSSAKHAAAAPWTA Trigger: TGCTGTCCACGGTGCGGCGGCTGCGTGCTTCGCGCTGCTCCTTCACCTTCTGCCGCGCGGCCGCGCAGCCCAGGGACGCGCGCGTGTGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS GCA 90 bp | AAGACGCGGCCGCCCTGGCTCAGGCACACGCGCGCGTCCCTGGGCTaGGCGGCCGCGCGGCAGAAGGTGAAGGAGCAGCGCGAAGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: KTRPPWLRHTRASLG*AAARQKVKEQREAR Trigger: GCGTGCTTCGCGCTGCTCCTTCACCTTCTGCCGCGCGGCCGCGCAGCCCAGGGACGCGCGCGTGTGCCTGAGCCAGGGCGGCCGCGTCTT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS CCA 90 bp | TCATCAACAGACTGGCTCTCGCCGACGCAGAAGACGCGGCCGCCCTaGCTCAGGCACACGCGCGCGTCCCTGGGCTGCGCGGCCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTDWLSPTQKTRPP*LRHTRASLGCAAAR Trigger: CCGCGCGGCCGCGCAGCCCAGGGACGCGCGCGTGTGCCTGAGCCAGGGCGGCCGCGTCTTCTGCGTCGGCGAGAGCCAGTCTGTTGATGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS CCA 90 bp | ATGCTCCATGACACCTTGTGCAGGCTGGGCCTCGGGGGAAGCTTCTaGGCCCGGGGGCGGGCCCTGCACTTGCTTGTCGGAGGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLHDTLCRLGLGGSF*ARGRALHLLVGGFA Trigger: GGCAAAGCCTCCGACAAGCAAGTGCAGGGCCCGCCCCCGGGCCCAGAAGCTTCCCCCGAGGCCCAGCCTGCACAAGGTGTCATGGAGCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS TCA 90 bp | GGCCTTCACCGGCGGCCTTGCAATCACCTTGGCCAGCATGCTCCATaGCACCTTGTGCAGGCTGGGCCTCGGGGGAAGCTTCTGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GLHRRPCNHLGQHAP*HLVQAGPRGKLLGP Trigger: CGGGCCCAGAAGCTTCCCCCGAGGCCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS CCA 90 bp | CCCATCTGCAGCAGGCTCACTTTCAGGGGCACAGCCCCTCCTCCGTaGGGAAGGGCCTTCACCGGCGGCCTTGCAATCACCTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PICSRLTFRGTAPPP*GRAFTGGLAITLAS Trigger: GCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAGGCCCTTCCCCACGGAGGAGGGGCTGTGCCCCTGAAAGTGAGCCTGCTGCAGATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS GCA 90 bp | GGGGAAGGGCCTTCACCGGCGGCCTTGCAATCACCTTGGCCAGCATaGTCCATGACACCTTGTGCAGGCTGGGCCTCGGGGGAAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GEGPSPAALQSPWPA*SMTPCAGWASGEAS Trigger: AGAAGCTTCCCCCGAGGCCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAGGCCCTTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS CCA 90 bp | GACCTGCAGGAACCCGGAGTCATCAAGGCCCACAATAGATGCCTGTaGCCCCTCCGTGCTGCCCAGGCGGACTTGCTGACCACCGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DLQEPGVIKAHNRCL*PLRAAQADLLTTVH Trigger: GTGCACGGTGGTCAGCAAGTCCGCCTGGGCAGCACGGAGGGGCCACAGGCATCTATTGTGGGCCTTGATGACTCCGGGTTCCTGCAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS TCA 90 bp | TTCCGTTCGGGGCAGAGTTCGCCCGCAGCACCCTCCACGCCGCTGTaGTCACAGGGAAGGTCTGGAATGTTCTCCGCAGACGCAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: FRSGQSSPAAPSTPL*SQGRSGMFSADADL Trigger: GAGGTCTGCGTCTGCGGAGAACATTCCAGACCTTCCCTGTGATCACAGCGGCGTGGAGGGTGCTGCGGGCGAACTCTGCCCCGAACGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS TCA 90 bp | GAAACCTGTCGATCAGTTTCTCCAGCACGGTCACGGCTCTGGCTATaGGACAGTCCGCTCGCAGGGGCTTCAGGCCCGCCCCGTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETCRSVSPARSRLWL*DSPLAGASGPPRAA Trigger: AGCAGCACGGGGCGGGCCTGAAGCCCCTGCGAGCGGACTGTCTCATAGCCAGAGCCGTGACCGTGCTGGAGAAACTGATCGACAGGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS GCA 90 bp | TTGGTGGACCTGCAGGAACCCGGAGTCATCAAGGCCCACAATAGATaGCTGTGGCCCCTCCGTGCTGCCCAGGCGGACTTGCTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LVDLQEPGVIKAHNR*LWPLRAAQADLLTT Trigger: GGTGGTCAGCAAGTCCGCCTGGGCAGCACGGAGGGGCCACAGGCATCTATTGTGGGCCTTGATGACTCCGGGTTCCTGCAGGTCCACCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGCGCCTGCTCAGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCACCTTCACCGGCGGCCTaGCAATCACCTTGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ECACSVLPGDPRSSFPVAPSPAA*QSPWPA Trigger: TGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAGG...TGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | TTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGGAACTTCGGGCCCCTTCCTTaGCCCTGGGTCTGCCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FRPPTSVEVAGSRRADRNFGPLP*PWVCRT Trigger: AGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAA...GTTCCTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS GCA 90 bp | CTTCTCACATTGCTGGATTTGAGCACGTTAAAGTCGTCTGCAGTCTaGACCAGGGAGGCGCCGGGCGGGAGCTCCAGGTGCACCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLTLLDLSTLKSSAV*TREAPGGSSRCTWQ Trigger: CTGCCAGGTGCACCTGGAGCTCCCGCCCGGCGCCTCCCTGGTGCAGACTGCAGACGACTTTAACGTGCTCAAATCCAGCAATGTGAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGCCTTCACCGGCGGCCTaGCAATCACCTTGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGDPRSSFPVAVDPSCLGPSPAA*QSPWPA Trigger: TGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAGG...CCCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGTTCGGGCCCCTTCCTTaGCCCTGGGTCTGCCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGFGPLP*PWVCRT Trigger: AGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAA...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS GCA 90 bp | ACGGGGCTCAGCCAGGCATTCGGGCCCCTTCCTTTGCCCTGGGTCTaGCGAACTGCAATGGCAATTAAGCCCATTTCCTGCGGCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGLSQAFGPLPLPWV*RTAMAIKPISCGIS Trigger: TGAGATGCCGCAGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAATGCCTGGCTGAGCCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | TTCGCCCGCAGCACCCTCCACGCCGCTGTGATCACAGGGAAGGTCTaGAATGTTCTCCGCAGACGCAGACCTCACCGAGTCAATGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: FARSTLHAAVITGKV*NVLRRRRPHRVNGT Trigger: AGTACCATTGACTCGGTGAGGTCTGCGTCTGCGGAGAACATTCCAGACCTTCCCTGTGATCACAGCGGCGTGGAGGGTGCTGCGGGCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGCCTTGCAATCACCTaGGCCAGCATGCTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRKQEGRQELVLSGWAAMGLAIT*ASMLHD Trigger: GTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCC...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGACTAGCAGGAGGCAGTaGTCAGACCACGGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSTSRRQ*SDHGSL Trigger: GAGGGACCCGTGGTCTGACAACTGCCTCCTGCTAGT...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
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| CDS-3UTR CAA 90 bp | AAGTCAGGCCAGTGGGGAATGCAGCTTCAGTGCTTCAGGCTGTGCTGTCTCTCGAACCCCACCATCCTCTaGGTGGACCTGCAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: KSGQWGMQLQCFRLCCLSNPTIL*VDLQEP Trigger: GGGTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTT...CGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGAGCATGTCGAAGGAGTaGCCATCTGGATGCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVPSAHFSGSGRKQEGRQSMSKE*PSGCTV Trigger: GACGGTGCATCCAGATGGCAACTCCTTCGACATGCT...CTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGGGCCTTGCAATCACCTaGGCCAGCATGCTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SAPRRSQEQLPCCSRSKLGLAIT*ASMLHD Trigger: GTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCC...CAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCATTAGCTTCCCAGGCCCTAGGCAGGCAGAGACAACAGTTATGCAAGCGGACTAGCAGGAGGCAGTaGTCAGACCACGGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SALASQALGRQRQQLCKRTSRRQ*SDHGSL Trigger: GAGGGACCCGTGGTCTGACAACTGCCTCCTGCTAGT...CCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCCTGGGAAGCTAATGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCGCCTGCTCAGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCACACTTCACTCGCAAGTaGATATCCTCATACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ECACSVLPGDPRSSFPVAHFTRK*ISSYPG Trigger: CCCAGGGTATGAGGATATCAACTTGCGAGTGAAGTG...TGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAGGCGCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGGCCCCGTGCTGCTTATaGTGTTCTTCGATGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGAPCCL*CSSMRS Trigger: CGACCTCATCGAAGAACACAATAAGCAGCACGGGGC...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS TCA 90 bp | CAGAGCCCACATACAGCAAGATATTGGGCGCCTTTCCCGAAATGTTaGCTCTCTTCCCTTTCCGTTCGGGGCAGAGTTCGCCCGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSPHTARYWAPFPKC*LSSLSVRGRVRPQH Trigger: GTGCTGCGGGCGAACTCTGCCCCGAACGGAAAGGGAAGAGAGTCAACATTTCGGGAAAGGCGCCCAATATCTTGCTGTATGTGGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS GCA 90 bp | GGCACGATGAGGTTTCTCAGCATGTCGAAGGAGTTGCCATCTGGATaGACCGTCACAACCCCACCATCCTCTTGGTGGACCTGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTMRFLSMSKELPSG*TVTTPPSSWWTCRN Trigger: GTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTCGACATGCTGAGAAACCTCATCGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | CTTGGGCACGATGAGGTTTCTCAGCATGTCGAAGGAGTTGCCATCTaGATGCACCGTCACAACCCCACCATCCTCTTGGTGGACCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGHDEVSQHVEGVAI*MHRHNPTILLVDLQ Trigger: CTGCAGGTCCACCAAGAGGATGGTGGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTCGACATGCTGAGAAACCTCATCGTGCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGGCCCCGTGCTGCTTATaGTGTTCTTCGATGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLAPCCL*CSSMRS Trigger: CGACCTCATCGAAGAACACAATAAGCAGCACGGGGC...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCAGCTGAGTTGTGTGAGACCCAGTGCTTGCTTACCTGTGCCTTCCAACACAACCCCACCATCCTCTaGGTGGACCTGCAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: ASAELCETQCLLTCAFQHNPTIL*VDLQEP Trigger: GGGTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTT...GTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCTCCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGAGCATGTCGAAGGAGTaGCCATCTGGATGCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAPRRSQEQLPCCSRSKLSMSKE*PSGCTV Trigger: GACGGTGCATCCAGATGGCAACTCCTTCGACATGCT...CAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS GCA 90 bp | GCTATGAGACAGTCCGCTCGCAGGGGCTTCAGGCCCGCCCCGTGCTaGTTATTGTGTTCTTCGATGAGGTCGTTGATACAAATGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AMRQSARRGFRPAPC*LLCSSMRSLIQMVG Trigger: TCCTACCATTTGTATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAAGCCCCTGCGAGCGGACTGTCTCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS GCA 90 bp | CTGGCTATGAGACAGTCCGCTCGCAGGGGCTTCAGGCCCGCCCCGTaGTGCTTATTGTGTTCTTCGATGAGGTCGTTGATACAAATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LAMRQSARRGFRPAP*CLLCSSMRSLIQMV Trigger: TACCATTTGTATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAAGCCCCTGCGAGCGGACTGTCTCATAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | AAGGAGTTGCCATCTGGATGCACCGTCACAACCCCACCATCCTCTTaGTGGACCTGCAGGAACCCGGAGTCATCAAGGCCCACAATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KELPSGCTVTTPPSS*WTCRNPESSRPTID Trigger: ATCTATTGTGGGCCTTGATGACTCCGGGTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTTGTGACGGTGCATCCAGATGGCAACTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACTTCGGGCCCCTTCCTTaGCCCTGGGTCTGCCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHFGPLP*PWVCRT Trigger: AGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAA...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGCACTTCACTCGCAAGTaGATATCCTCATACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGHFTRK*ISSYPG Trigger: CCCAGGGTATGAGGATATCAACTTGCGAGTGAAGTG...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | GAAGGTCTGGAATGTTCTCCGCAGACGCAGACCTCACCGAGTCAATaGTACTGTTCTCGAGCTCCAGACACTCGTGACAGATGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGLECSPQTQTSPSQ*YCSRAPDTRDRWTG Trigger: ACCTGTCCATCTGTCACGAGTGTCTGGAGCTCGAGAACAGTACCATTGACTCGGTGAGGTCTGCGTCTGCGGAGAACATTCCAGACCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS CCA 90 bp | CCTGCGGCATCTCAAACATCAACCCATCCAGGAGACTCATGGTGGTaGAGGTCACTTCTGCAAACAGAATCACTTTCCCAAGGCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAASQTSTHPGDSWW*RSLLQTESLSQGAW Trigger: CCACGCGCCTTGGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACCACCATGAGTCTCCTGGATGGGTTGATGTTTGAGATGCCGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | AGGCATTCGGGCCCCTTCCTTTGCCCTGGGTCTGCCGAACTGCAATaGCAATTAAGCCCATTTCCTGCGGCATCTCAAACATCAACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RHSGPFLCPGSAELQ*QLSPFPAASQTSTH Trigger: ATGGGTTGATGTTTGAGATGCCGCAGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCGGCCTTGCAATCACCTaGGCCAGCATGCTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: CFSFPSQYTQIQAHMGKSGLAIT*ASMLHD Trigger: GTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCC...GCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS GCA 90 bp | TTGCCCTGGGTCTGCCGAACTGCAATGGCAATTAAGCCCATTTCCTaGGGCATCTCAAACATCAACCCATCCAGGAGACTCATGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPWVCRTAMAIKPIS*GISNINPSRRLMVV Trigger: CACCACCATGAGTCTCCTGGATGGGTTGATGTTTGAGATGCCGCAGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGACCCAGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | CTGAGCCGTACCTCAGTCCCATCAGCCTTAGAGAAAACCAAGTTCTaGACTGTGTTCCGTAGCACATCTCTCCTGGTCACCCGAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRTSVPSALEKTKF*TVFRSTSLLVTRKP Trigger: TGGCTTTCGGGTGACCAGGAGAGATGTGCTACGGAACACAGTCCAGAACTTGGTTTTCTCTAAGGCTGATGGGACTGAGGTACGGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | ATTCCTAACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCAACTAGCAGGAGGCAGTaGTCAGACCACGGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPNPLLLISLPVHTNPSPTSRRQ*SDHGSL Trigger: GAGGGACCCGTGGTCTGACAACTGCCTCCTGCTAGT...TGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTTAGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | TTCCGTCCGCCCACTTCAGTGGAAGTGGCAGGAAGCAGGAGGGCAGACAGGAACACAATCATTTTATCCTaGTCCTCATTCTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRPPTSVEVAGSRRADRNTIILS*SSFSRW Trigger: CCACCTGGAGAATGAGGACAAGGATAAAATGATTGT...GTTCCTGTCTGCCCTCCTGCTTCCTGCCACTTCCACTGAAGTGGGCGGACGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGGGCTCACATTGCTGGATTaGAGCACGTTAAAGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QEAGGQTGTSSFRLGSDGLTLLD*STLKSS Trigger: AGACGACTTTAACGTGCTCAAATCCAGCAATGTGAG...CCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGAGATCCCAGGAGCAGCTTCCCTGTTGCAGTAGATCCAAGCTGTCTGGGTCGTGTCTTCTCACATaGCTGGATTTGAGCACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRRSQEQLPCCSRSKLSGSCLLT*LDLSTL Trigger: TAACGTGCTCAAATCCAGCAATGTGAGAAGACACGA...CCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGGAAGCAGGAGGGCAGACAGGAACTAGTTCTTTCAGGCTGGGCAGCGATGAGAAACAGGGCCCATTaGTTCAAGTCATCAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRKQEGRQELVLSGWAAMRNRAH*FKSSTD Trigger: GTCTGTTGATGACTTGAACAAATGGGCCCTGTTTCT...CATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGCTTCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS CCA 90 bp | TTTCCTGCGGCATCTCAAACATCAACCCATCCAGGAGACTCATGGTaGTGGAGGTCACTTCTGCAAACAGAATCACTTTCCCAAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FPAASQTSTHPGDSW*WRSLLQTESLSQGA Trigger: CGCGCCTTGGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACCACCATGAGTCTCCTGGATGGGTTGATGTTTGAGATGCCGCAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACGCCCCGTGCTGCTTATaGTGTTCTTCGATGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHAPCCL*CSSMRS Trigger: CGACCTCATCGAAGAACACAATAAGCAGCACGGGGC...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS TCA 90 bp | CAAGGACATCAAATGCTGGACAAATGGAATCCTCTGTCCCAGTTGTaGCCTCAGGGGGATGAAGACCAGCAGAGTGGAAAGAGCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QGHQMLDKWNPLSQL*PQGDEDQQSGKSTS Trigger: GGATGTGCTCTTTCCACTCTGCTGGTCTTCATCCCCCTGAGGTCACAACTGGGACAGAGGATTCCATTTGTCCAGCATTTGATGTCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | CCATTTCCTGCGGCATCTCAAACATCAACCCATCCAGGAGACTCATaGTGGTGGAGGTCACTTCTGCAAACAGAATCACTTTCCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFPAASQTSTHPGDS*WWRSLLQTESLSQG Trigger: GCCTTGGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACCACCATGAGTCTCCTGGATGGGTTGATGTTTGAGATGCCGCAGGAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS CCA 90 bp | AATATCGTTGGGCCACTTCACTCGCAAGTTGATATCCTCATACCCTaGGATAGACCGCACTGCCTCCACCACAGCCAAGGACATCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: NIVGPLHSQVDILIP*DRPHCLHHSQGHQM Trigger: CATTTGATGTCCTTGGCTGTGGTGGAGGCAGTGCGGTCTATCCCAGGGTATGAGGATATCAACTTGCGAGTGAAGTGGCCCAACGATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCAACCCCACCATCCTCTaGGTGGACCTGCAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSNPTIL*VDLQEP Trigger: GGGTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTT...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS GCA 90 bp | CTTCACTCGCAAGTTGATATCCTCATACCCTGGGATAGACCGCACTaGCTCCACCACAGCCAAGGACATCAAATGCTGGACAAATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LHSQVDILIPWDRPH*LHHSQGHQMLDKWN Trigger: ATTCCATTTGTCCAGCATTTGATGTCCTTGGCTGTGGTGGAGGCAGTGCGGTCTATCCCAGGGTATGAGGATATCAACTTGCGAGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACATCTTTTCGGGCCCCTTCCTTaGCCCTGGGTCTGCCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LSFVLPRRRFSTSSFEHLFGPLP*PWVCRT Trigger: AGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAA...AAGATGTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTGTTCTGGGACAGCAGTGAGCATGCCCCTGAGCTGTGGGCATTCACTGTCTTCGATGAGGTCGTaGATACAAATGGTAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: LVCSGTAVSMPLSCGHSLSSMRS*IQMVGL Trigger: TAATCCTACCATTTGTATCAACGACCTCATCGAAGA...CAGTGAATGCCCACAGCTCAGGGGCATGCTCACTGCTGTCCCAGAACACACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTAACCCCACCATCCTCTaGGTGGACCTGCAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFNPTIL*VDLQEP Trigger: GGGTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTT...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | ATTCCTAACCCCTTGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACACTTCACTCGCAAGTaGATATCCTCATACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPNPLLLISLPVHTNPSPHFTRK*ISSYPG Trigger: CCCAGGGTATGAGGATATCAACTTGCGAGTGAAGTG...TGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTTAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACGCCCCGTGCTGCTTATaGTGTTCTTCGATGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASSPLFFHGDVLAHQVLNAPCCL*CSSMRS Trigger: CGACCTCATCGAAGAACACAATAAGCAGCACGGGGC...GTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CACGCACATACGTCTCTCCAAACTGATGGCATTTTTGTGTCAGTCTCTCTCTCTCCAAGCTTGCTGAAGTaGTCCACGCTTGCCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HAHTSLQTDGIFVSVSLSPSLLK*STLALA Trigger: TGCTAAGGCAAGCGTGGACAACTTCAGCAAGCTTGG...AGAGAGAGAGACTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCACTTCTATACCTCACTCGTGTCTTCTCACATaGCTGGATTTGAGCACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SQYTQIQAHMGKSTSIPHSCLLT*LDLSTL Trigger: TAACGTGCTCAAATCCAGCAATGTGAGAAGACACGA...GTGAGGTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTCATTTCCCTCCCAGTACACACAAATCCAAGCCCACATGGGGAAGAGCTCTTCGATGAGGTCGTaGATACAAATGGTAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: CFSFPSQYTQIQAHMGKSSSMRS*IQMVGL Trigger: TAATCCTACCATTTGTATCAACGACCTCATCGAAGA...GCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGACATTATGAAATTGGGGGCAGAAAGTCATGACTTACAATACAGTGCTAGCATGTCGAAGGAGTaGCCATCTGGATGCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPDIMKLGAESHDLQYSASMSKE*PSGCTV Trigger: GACGGTGCATCCAGATGGCAACTCCTTCGACATGCT...AGCACTGTATTGTAAGTCATGACTTTCTGCCCCCAATTTCATAATGTCAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTGAACATCTTAGCATGTCGAAGGAGTaGCCATCTGGATGCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSFVLPRRRFSTSSFEHLSMSKE*PSGCTV Trigger: GACGGTGCATCCAGATGGCAACTCCTTCGACATGCT...AAGATGTTCAAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCCTTATATTACAAAGTCTGAGAAATGAACCTTTGCAACAGCCAGCTTGGCACTTCACTCGCAAGTaGATATCCTCATACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLILQSLRNEPLQQPAWHFTRK*ISSYPG Trigger: CCCAGGGTATGAGGATATCAACTTGCGAGTGAAGTG...CCAAGCTGGCTGTTGCAAAGGTTCATTTCTCAGACTTTGTAATATAAGGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS TCA 90 bp | TCCAAATGCTCTCTGTCACAAATGCTATATGTTCTGCCTCAAGTATaGAGGGAGACACGAGAAACAGGGCCCATTTGTTCAAGTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SKCSLSQMLYVLPQV*RETRETGPICSSHQ Trigger: TTGATGACTTGAACAAATGGGCCCTGTTTCTCGTGTCTCCCTTCATACTTGAGGCAGAACATATAGCATTTGTGACAGAGAGCATTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | CACCAGATGCACCTTCAAACACCCAGTAAAACCACATATATGTGTCCCAAATCCACAATCATTTTATCCTaGTCCTCATTCTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HQMHLQTPSKTTYMCPKSTIILS*SSFSRW Trigger: CCACCTGGAGAATGAGGACAAGGATAAAATGATTGT...GGATTTGGGACACATATATGTGGTTTTACTGGGTGTTTGAAGGTGCATCTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTCTCACATTGCTGGATTaGAGCACGTTAAAGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFLTLLD*STLKSS Trigger: AGACGACTTTAACGTGCTCAAATCCAGCAATGTGAG...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTCCTCTCCTTTGTTCTTCCACGGAGACGTTTTAGCACATCAAGTTTTACAATCATTTTATCCTaGTCCTCATTCTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGFLSFVLPRRRFSTSSFTIILS*SSFSRW Trigger: CCACCTGGAGAATGAGGACAAGGATAAAATGATTGT...AAAACTTGATGTGCTAAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTTCGTGTCTTCTCACATaGCTGGATTTGAGCACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFSCLLT*LDLSTL Trigger: TAACGTGCTCAAATCCAGCAATGTGAGAAGACACGA...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTCAAACACACGTCAGGTTGGTATAGTTCACCCTGTTATTTATTTATTTTCTTCGATGAGGTCGTaGATACAAATGGTAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: SPSNTRQVGIVHPVIYLFSSMRS*IQMVGL Trigger: TAATCCTACCATTTGTATCAACGACCTCATCGAAGA...AAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGGGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000228910.2 |
||
| CDS TCA 72 bp | GCGCGTCCCTGGGCTGCGCGGCCGCGCGGCAGAAGGTaGAGGAGCAGCGCGAAGCACGCAGCCGCCGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ARPWAARPRGRR*RSSAKHAAAAP Trigger: CGGTGCGGCGGCTGCGTGCTTCGCGCTGCTCCTTCACCTTCTGCCGCGCGGCCGCGCAGCCCAGGGACGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS GCA 72 bp | CCGCCCTGGCTCAGGCACACGCGCGCGTCCCTGGGCTaGGCGGCCGCGCGGCAGAAGGTGAAGGAGCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPWLRHTRASLG*AAARQKVKEQR Trigger: GCGCTGCTCCTTCACCTTCTGCCGCGCGGCCGCGCAGCCCAGGGACGCGCGCGTGTGCCTGAGCCAGGGCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS CCA 72 bp | GACTGGCTCTCGCCGACGCAGAAGACGCGGCCGCCCTaGCTCAGGCACACGCGCGCGTCCCTGGGCTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: DWLSPTQKTRPP*LRHTRASLGCA Trigger: CGCGCAGCCCAGGGACGCGCGCGTGTGCCTGAGCCAGGGCGGCCGCGTCTTCTGCGTCGGCGAGAGCCAGTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
||
| CDS CCA 72 bp | GACACCTTGTGCAGGCTGGGCCTCGGGGGAAGCTTCTaGGCCCGGGGGCGGGCCCTGCACTTGCTTGTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: DTLCRLGLGGSF*ARGRALHLLVG Trigger: TCCGACAAGCAAGTGCAGGGCCCGCCCCCGGGCCCAGAAGCTTCCCCCGAGGCCCAGCCTGCACAAGGTGTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS CCA 72 bp | ACCAGGGAGGCGCCGGGCGGGAGCTCCAGGTGCACCTaGCAGAGAACGGCTTCCCCTCCGAGGGTTCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TREAPGGSSRCT*QRTASPPRVPK Trigger: TTTTGGAACCCTCGGAGGGGAAGCCGTTCTCTGCCAGGTGCACCTGGAGCTCCCGCCCGGCGCCTCCCTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS CCA 72 bp | AGCAGGCTCACTTTCAGGGGCACAGCCCCTCCTCCGTaGGGAAGGGCCTTCACCGGCGGCCTTGCAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRLTFRGTAPPP*GRAFTGGLAIT Trigger: GGTGATTGCAAGGCCGCCGGTGAAGGCCCTTCCCCACGGAGGAGGGGCTGTGCCCCTGAAAGTGAGCCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS GCA 72 bp | GCAATCACCTTGGCCAGCATGCTCCATGACACCTTGTaGAGGCTGGGCCTCGGGGGAAGCTTCTGGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AITLASMLHDTL*RLGLGGSFWAR Trigger: CCGGGCCCAGAAGCTTCCCCCGAGGCCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCCAAGGTGATTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS GCA 72 bp | CCTTCACCGGCGGCCTTGCAATCACCTTGGCCAGCATaGTCCATGACACCTTGTGCAGGCTGGGCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSPAALQSPWPA*SMTPCAGWASG Trigger: CCCCGAGGCCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS CAA 72 bp | CCCCTCCTCCGTGGGGAAGGGCCTTCACCGGCGGCCTaGCAATCACCTTGGCCAGCATGCTCCATGACACCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLRGEGPSPAA*QSPWPACSMTP Trigger: AGGTGTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCCGCCGGTGAAGGCCCTTCCCCACGGAGGAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS TCA 72 bp | CGGCGGCCTTGCAATCACCTTGGCCAGCATGCTCCATaGCACCTTGTGCAGGCTGGGCCTCGGGGGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RRPCNHLGQHAP*HLVQAGPRGKL Trigger: AAGCTTCCCCCGAGGCCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCCAAGGTGATTGCAAGGCCGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS TCA 72 bp | GGGCAGAGTTCGCCCGCAGCACCCTCCACGCCGCTGTaGTCACAGGGAAGGTCTGGAATGTTCTCCGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GQSSPAAPSTPL*SQGRSGMFSAD Trigger: GTCTGCGGAGAACATTCCAGACCTTCCCTGTGATCACAGCGGCGTGGAGGGTGCTGCGGGCGAACTCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
||
| CDS CAA 72 bp | CCCGGGGGCGGGCCCTGCACTTGCTTGTCGGAGGCTTaGCCGAGTTCCTTCAGAGCAGGGTCCTTTAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGGGPCTCLSEA*PSSFRAGSFKW Trigger: CCACTTAAAGGACCCTGCTCTGAAGGAACTCGGCAAAGCCTCCGACAAGCAAGTGCAGGGCCCGCCCCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS TCA 72 bp | GCACATCTCTCCTGGTCACCCGAAAGCCACCCAACGTaGAGGGGGAAGACAGGCCCAGCACCTTCCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: AHLSWSPESHPT*RGKTGPAPSLP Trigger: AGGGAGGGAAGGTGCTGGGCCTGTCTTCCCCCTTCACGTTGGGTGGCTTTCGGGTGACCAGGAGAGATGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS GCA 72 bp | TTGCTGGATTTGAGCACGTTAAAGTCGTCTGCAGTCTaGACCAGGGAGGCGCCGGGCGGGAGCTCCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLDLSTLKSSAV*TREAPGGSSRC Trigger: GCACCTGGAGCTCCCGCCCGGCGCCTCCCTGGTGCAGACTGCAGACGACTTTAACGTGCTCAAATCCAGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CAA 72 bp | CTTGCAATCACCTTGGCCAGCATGCTCCATGACACCTaGTGCAGGCTGGGCCTCGGGGGAAGCTTCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LAITLASMLHDT*CRLGLGGSFWA Trigger: GGCCCAGAAGCTTCCCCCGAGGCCCAGCCTGCACAAGGTGTCATGGAGCATGCTGGCCAAGGTGATTGCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CAA 72 bp | CCCACGGGGCTCAGCCAGGCATTCGGGCCCCTTCCTTaGCCCTGGGTCTGCCGAACTGCAATGGCAATTAAG | + |
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Preference number: 6 (lower is better) Translates to: PTGLSQAFGPLP*PWVCRTAMAIK Trigger: CTTAATTGCCATTGCAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAATGCCTGGCTGAGCCCCGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
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| CDS CCA 72 bp | AGCACCCTCCACGCCGCTGTGATCACAGGGAAGGTCTaGAATGTTCTCCGCAGACGCAGACCTCACCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: STLHAAVITGKV*NVLRRRRPHRV Trigger: GACTCGGTGAGGTCTGCGTCTGCGGAGAACATTCCAGACCTTCCCTGTGATCACAGCGGCGTGGAGGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CAA 72 bp | GCCATCTGGATGCACCGTCACAACCCCACCATCCTCTaGGTGGACCTGCAGGAACCCGGAGTCATCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: AIWMHRHNPTIL*VDLQEPGVIKA Trigger: GGCCTTGATGACTCCGGGTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTTGTGACGGTGCATCCAGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 90 bp | TCTTTGGGGATGGGGTCCCTGCTGGCAATAACTAGCAGGAGGCAGTaGTCAGACCACGGGTCCCTCAGAGCGCTGTCTTCCAGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SLGMGSLLAITSRRQ*SDHGSLRALSSSRW Trigger: CCACCTGCTGGAAGACAGCGCTCTGAGGGACCCGTGGTCTGACAACTGCCTCCTGCTAGTTATTGCCAGCAGGGACCCCATCCCCAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS GCA 72 bp | AGCCAGGCATTCGGGCCCCTTCCTTTGCCCTGGGTCTaGCGAACTGCAATGGCAATTAAGCCCATTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SQAFGPLPLPWV*RTAMAIKPISC Trigger: GCAGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCCCGAATGCCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
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| CDS GCA 72 bp | CAGTCCGCTCGCAGGGGCTTCAGGCCCGCCCCGTGCTaGTTATTGTGTTCTTCGATGAGGTCGTTGATACAA | + |
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Preference number: 6 (lower is better) Translates to: QSARRGFRPAPC*LLCSSMRSLIQ Trigger: TTGTATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAAGCCCCTGCGAGCGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS GCA 72 bp | AGACAGTCCGCTCGCAGGGGCTTCAGGCCCGCCCCGTaGTGCTTATTGTGTTCTTCGATGAGGTCGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: RQSARRGFRPAP*CLLCSSMRSLI Trigger: TATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAAGCCCCTGCGAGCGGACTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 90 bp | CCAGAGCCCACATACAGCAAGATATTGGGCGCCTTTCCCGAAATGTaGACTCTCTTCCCTTTCCGTTCGGGGCAGAGTTCGCCCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PEPTYSKILGAFPEM*TLFPFRSGQSSPAA Trigger: TGCTGCGGGCGAACTCTGCCCCGAACGGAAAGGGAAGAGAGTCAACATTTCGGGAAAGGCGCCCAATATCTTGCTGTATGTGGGCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CAA 90 bp | GAAGGAGTTGCCATCTGGATGCACCGTCACAACCCCACCATCCTCTaGGTGGACCTGCAGGAACCCGGAGTCATCAAGGCCCACAATAGA | + |
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Preference number: 6 (lower is better) Translates to: EGVAIWMHRHNPTIL*VDLQEPGVIKAHNR Trigger: TCTATTGTGGGCCTTGATGACTCCGGGTTCCTGCAGGTCCACCAAGAGGATGGTGGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CCA 72 bp | GGGCCACTTCACTCGCAAGTTGATATCCTCATACCCTaGGATAGACCGCACTGCCTCCACCACAGCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GPLHSQVDILIP*DRPHCLHHSQG Trigger: TCCTTGGCTGTGGTGGAGGCAGTGCGGTCTATCCCAGGGTATGAGGATATCAACTTGCGAGTGAAGTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
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| CDS CAA 90 bp | GTGCACCCAGTATTTATAATAGAGGGGAAGAACGCCGTCGGGCCCTaGGTCCTGAAACCTGTCGATCAGTTTCTCCAGCACGGTCACGGC | + |
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Preference number: 6 (lower is better) Translates to: VHPVFIIEGKNAVGP*VLKPVDQFLQHGHG Trigger: GCCGTGACCGTGCTGGAGAAACTGATCGACAGGTTTCAGGACCAAGGGCCCGACGGCGTTCTTCCCCTCTATTATAAATACTGGGTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 90 bp | TACTGTCGCTTGGGCACGATGAGGTTTCTCAGCATGTCGAAGGAGTaGCCATCTGGATGCACCGTCACAACCCCACCATCCTCTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: YCRLGTMRFLSMSKE*PSGCTVTTPPSSWW Trigger: CCACCAAGAGGATGGTGGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTCGACATGCTGAGAAACCTCATCGTGCCCAAGCGACAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 90 bp | GGGTCCTTTAAGTGGACTGAAACGATCTTCTGGGCTATCAGGCCGTaGTCCATCTGGAGCCTGTCCTCCATGAAGGCCACCCCAAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GSFKWTETIFWAIRP*SIWSLSSMKATPSL Trigger: CAAGCTTGGGGTGGCCTTCATGGAGGACAGGCTCCAGATGGACAACGGCCTGATAGCCCAGAAGATCGTTTCAGTCCACTTAAAGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
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| CDS GCA 72 bp | AGGTTTCTCAGCATGTCGAAGGAGTTGCCATCTGGATaGACCGTCACAACCCCACCATCCTCTTGGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: RFLSMSKELPSG*TVTTPPSSWWT Trigger: GGTCCACCAAGAGGATGGTGGGGTTGTGACGGTGCATCCAGATGGCAACTCCTTCGACATGCTGAGAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CCA 72 bp | GGCCCCTTCCTTTGCCCTGGGTCTGCCGAACTGCAATaGCAATTAAGCCCATTTCCTGCGGCATCTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: GPFLCPGSAELQ*QLSPFPAASQT Trigger: TGTTTGAGATGCCGCAGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGACCCAGGGCAAAGGAAGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
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| CDS CAA 72 bp | GCTCGCAGGGGCTTCAGGCCCGCCCCGTGCTGCTTATaGTGTTCTTCGATGAGGTCGTTGATACAAATGGTA | + |
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Preference number: 6 (lower is better) Translates to: ARRGFRPAPCCL*CSSMRSLIQMV Trigger: TACCATTTGTATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAAGCCCCTGCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 72 bp | AAGTGGACTGAAACGATCTTCTGGGCTATCAGGCCGTaGTCCATCTGGAGCCTGTCCTCCATGAAGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: KWTETIFWAIRP*SIWSLSSMKAT Trigger: GGTGGCCTTCATGGAGGACAGGCTCCAGATGGACAACGGCCTGATAGCCCAGAAGATCGTTTCAGTCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
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| CDS CAA 90 bp | AGACAGTCCGCTCGCAGGGGCTTCAGGCCCGCCCCGTGCTGCTTATaGTGTTCTTCGATGAGGTCGTTGATACAAATGGTAGGATTACTG | + |
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Preference number: 6 (lower is better) Translates to: RQSARRGFRPAPCCL*CSSMRSLIQMVGLL Trigger: CAGTAATCCTACCATTTGTATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAAGCCCCTGCGAGCGGACTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CCA 72 bp | GAATGTTCTCCGCAGACGCAGACCTCACCGAGTCAATaGTACTGTTCTCGAGCTCCAGACACTCGTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: ECSPQTQTSPSQ*YCSRAPDTRDR Trigger: TCTGTCACGAGTGTCTGGAGCTCGAGAACAGTACCATTGACTCGGTGAGGTCTGCGTCTGCGGAGAACATTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CCA 72 bp | CGCACTGCCTCCACCACAGCCAAGGACATCAAATGCTaGACAAATGGAATCCTCTGTCCCAGTTGTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: RTASTTAKDIKC*TNGILCPSCDL Trigger: GAGGTCACAACTGGGACAGAGGATTCCATTTGTCCAGCATTTGATGTCCTTGGCTGTGGTGGAGGCAGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000227698.2 ENSMUST00000228910.2 |
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| CDS CAA 72 bp | AGGGTTCCAAAAGGCACGTGCACAATCATTTTATCCTaGTCCTCATTCTCCAGGTGGCCCTGGAGCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RVPKGTCTIILS*SSFSRWPWSLP Trigger: GGGCAGGCTCCAGGGCCACCTGGAGAATGAGGACAAGGATAAAATGATTGTGCACGTGCCTTTTGGAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS TCA 72 bp | CATACAGCAAGATATTGGGCGCCTTTCCCGAAATGTTaGCTCTCTTCCCTTTCCGTTCGGGGCAGAGTTCGC | + |
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Preference number: 6 (lower is better) Translates to: HTARYWAPFPKC*LSSLSVRGRVR Trigger: GCGAACTCTGCCCCGAACGGAAAGGGAAGAGAGTCAACATTTCGGGAAAGGCGCCCAATATCTTGCTGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CAA 72 bp | GCTTCCTCGGAACCAGAGCCCACATACAGCAAGATATaGGGCGCCTTTCCCGAAATGTTGACTCTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ASSEPEPTYSKI*GAFPEMLTLFP Trigger: AGGGAAGAGAGTCAACATTTCGGGAAAGGCGCCCAATATCTTGCTGTATGTGGGCTCTGGTTCCGAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS GCA 72 bp | GTCTGCCGAACTGCAATGGCAATTAAGCCCATTTCCTaGGGCATCTCAAACATCAACCCATCCAGGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: VCRTAMAIKPIS*GISNINPSRRL Trigger: GAGTCTCCTGGATGGGTTGATGTTTGAGATGCCGCAGGAAATGGGCTTAATTGCCATTGCAGTTCGGCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CCA 72 bp | ACCTCAGTCCCATCAGCCTTAGAGAAAACCAAGTTCTaGACTGTGTTCCGTAGCACATCTCTCCTGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: TSVPSALEKTKF*TVFRSTSLLVT Trigger: GGTGACCAGGAGAGATGTGCTACGGAACACAGTCCAGAACTTGGTTTTCTCTAAGGCTGATGGGACTGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CAA 72 bp | GTATTTATAATAGAGGGGAAGAACGCCGTCGGGCCCTaGGTCCTGAAACCTGTCGATCAGTTTCTCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VFIIEGKNAVGP*VLKPVDQFLQH Trigger: GTGCTGGAGAAACTGATCGACAGGTTTCAGGACCAAGGGCCCGACGGCGTTCTTCCCCTCTATTATAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 72 bp | TCAAGTATGAAGGGAGACACGAGAAACAGGGCCCATTaGTTCAAGTCATCAACAGACTGGCTCTCGCCGACG | + |
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Preference number: 6 (lower is better) Translates to: SSMKGDTRNRAH*FKSSTDWLSPT Trigger: CGTCGGCGAGAGCCAGTCTGTTGATGACTTGAACAAATGGGCCCTGTTTCTCGTGTCTCCCTTCATACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
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| CDS TCA 72 bp | AGGAAACAAACTGAAGGGAGAGCTTGCTGGATTTTATaGTTCCTTCAGGATCTGTGTGCCTCCCGAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RKQTEGRACWIL*FLQDLCASRAT Trigger: AGTGGCTCGGGAGGCACACAGATCCTGAAGGAATCATAAAATCCAGCAAGCTCTCCCTTCAGTTTGTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 72 bp | GTCAGGATCTCCTTAAGGACCTCGTGTCTTCTCACATaGCTGGATTTGAGCACGTTAAAGTCGTCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: VRISLRTSCLLT*LDLSTLKSSAV Trigger: GACTGCAGACGACTTTAACGTGCTCAAATCCAGCAATGTGAGAAGACACGAGGTCCTTAAGGAGATCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 |
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| CDS CAA 90 bp | TTCAGGCCCGCCCCGTGCTGCTTATTGTGTTCTTCGATGAGGTCGTaGATACAAATGGTAGGATTACTGTTCGTCACATTGAATCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: FRPAPCCLLCSSMRS*IQMVGLLFVTLNPQ Trigger: CTGTGGATTCAATGTGACGAACAGTAATCCTACCATTTGTATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGCGGGCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CCA 72 bp | TCTCAAACATCAACCCATCCAGGAGACTCATGGTGGTaGAGGTCACTTCTGCAAACAGAATCACTTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SQTSTHPGDSWW*RSLLQTESLSQ Trigger: TTGGGAAAGTGATTCTGTTTGCAGAAGTGACCTCCACCACCATGAGTCTCCTGGATGGGTTGATGTTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS CAA 72 bp | GCCCCGTGCTGCTTATTGTGTTCTTCGATGAGGTCGTaGATACAAATGGTAGGATTACTGTTCGTCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: APCCLLCSSMRS*IQMVGLLFVTL Trigger: CAATGTGACGAACAGTAATCCTACCATTTGTATCAACGACCTCATCGAAGAACACAATAAGCAGCACGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099512.3 ENSMUST00000163193.9 ENSMUST00000227141.2 ENSMUST00000228910.2 |
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| CDS TCA 72 bp | TCTCTGTCACAAATGCTATATGTTCTGCCTCAAGTATaGAGGGAGACACGAGAAACAGGGCCCATTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSQMLYVLPQV*RETRETGPICS Trigger: TGAACAAATGGGCCCTGTTTCTCGTGTCTCCCTTCATACTTGAGGCAGAACATATAGCATTTGTGACAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
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| CDS GCA 72 bp | ACTGGTACCTTGTATCCAAATGCTCTCTGTCACAAATaGTATATGTTCTGCCTCAAGTATGAAGGGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: TGTLYPNALCHK*YMFCLKYEGRH Trigger: GTGTCTCCCTTCATACTTGAGGCAGAACATATAGCATTTGTGACAGAGAGCATTTGGATACAAGGTACCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227141.2 |
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