Pregenerated sensors for HIRIP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042606Ensembl transcript IDs: ENSMUST00000037248.10, ENSMUST00000132808.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATTCTAATGCCTGGAGAGGATaGTTGCACATGAACCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GARTTLESIRERIRLLNSNAWRG*LHMNPK Trigger: CTTGGGGTTCATGTGCAAGCATCCTCTCCAGGCATT...AGAATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR-3UTR CCA 90 bp | ATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGACTGTAGTCTGTCTTTaGAAGTTGCTTCCACTGACC | + |
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Preference number: 2 (lower is better) Translates to: IHSWSQLYIAKARLATLETVVCL*KLLPLT Trigger: GGTCAGTGGAAGCAACTTCCAAAGACAGACTACAGT...CTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR-3UTR TCA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTGGAAGTTGCTTCCACTaGCCAGGCTCTTGTATAACA | + |
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Preference number: 2 (lower is better) Translates to: IESLKTNNSPLKCLERMLGSCFH*PGSCIT Trigger: TGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCC...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR TCA 72 bp | TTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTaGTACCATCTGGTGACAGACTGGATGACACAGTAC | + |
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Preference number: 3 (lower is better) Translates to: LATLEEGEPYPL*YHLVTDWMTQY Trigger: GTACTGTGTCATCCAGTCTGTCACCAGATGGTATCAGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR CCA 72 bp | GTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTaGAGGAGGGAGAGCCATACCCTCTCTGATACCATC | + |
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Preference number: 3 (lower is better) Translates to: VNFTLLRPDWPH*RRESHTLSDTI Trigger: GATGGTATCAGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR-3UTR CAA 90 bp | ACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTCGGTTTGGGACCAATTaGGATGAAGTAATTACAAAC | + |
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Preference number: 3 (lower is better) Translates to: TLLRPDWPHWRRESHTLSRFGTN*DEVITN Trigger: GTTTGTAATTACTTCATCCAAATTGGTCCCAAACCG...AGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR CCA 72 bp | GCCAATAACTTGGATCCTGCCACTGTAGTCTGTCTTTaGAAGTTGCTTCCACTGACCAGGCTCTTGTATAAC | + |
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Preference number: 3 (lower is better) Translates to: ANNLDPATVVCL*KLLPLTRLLYN Trigger: GTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGACTACAGTGGCAGGATCCAAGTTATTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR-3UTR CAA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTGTCTGTCTTTGGAAGTaGCTTCCACTGACCAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: IESLKTNNSPLKCLERMLVCLWK*LPLTRL Trigger: GAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR-3UTR CAA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTCACTGTAGTCTGTCTTaGGAAGTTGCTTCCACTGAC | + |
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Preference number: 3 (lower is better) Translates to: IESLKTNNSPLKCLERMLHCSLS*EVASTD Trigger: GTCAGTGGAAGCAACTTCCAAAGACAGACTACAGTG...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTGATACCATCTGGTGACAGAAGTGCCTTGAGCAGCTaGTTGCTCCTGTGTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GHTGGGRAIPSLIPSGDRSALSS*LLLCAV Trigger: AACAGCACACAGGAGCAAGCAGCTGCTCAAGGCACT...TCTGTCACCAGATGGTATCAGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR TCA 90 bp | TCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGGGACGGAGGTCCCTTCCCCTaGAGGGTTCCAGGCATTTCG | + |
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Preference number: 4 (lower is better) Translates to: STTKFLTPKDRQGMTVWDGGPFP*RVPGIS Trigger: CGAAATGCCTGGAACCCTTCAGGGGAAGGGACCTCC...GTCCCAAACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR TCA 90 bp | TCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGGGACCGGCTGCTCCTCTTCTaGGTCCAGGGTTCGGCGATA | + |
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Preference number: 4 (lower is better) Translates to: STTKFLTPKDRQGMTVWDRLLLF*VQGSAI Trigger: TATCGCCGAACCCTGGACTCAGAAGAGGAGCAGCCG...GTCCCAAACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTGATACCATCTGGTGACAGATTTCTCTTCACCGAGTaGTCTTCTCCCTCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: GHTGGGRAIPSLIPSGDRFLFTE*SSPSSL Trigger: CAGTGAGGAGGGAGAAGAGCACTCGGTGAAGAGAAA...TCTGTCACCAGATGGTATCAGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTGATACCATCTGGTGACAGATGTTACTGTCATCCCTaGTGCTTGTGTTCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GHTGGGRAIPSLIPSGDRCYCHP*CLCSAS Trigger: GGAGGCAGAACACAAGCAGCAGGGATGACAGTAACA...TCTGTCACCAGATGGTATCAGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR TCA 90 bp | TTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCGACTTTGTAGTGCCTTaGGCAGCTGCTTGCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FTLLRPDWPHWRRESHTLDFVVP*AAACSC Trigger: ACAGGAGCAAGCAGCTGCTCAAGGCACTACAAAGTC...GAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATTCCACCTTTGCTCTCTaGAGCACAGCCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VNFTLLRPDWPHWRRESHSTFAL*STASSS Trigger: TGAGGAGGAGGCTGTGCTGCAGAGAGCAAAGGTGGA...ATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | ACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTTCTTCACTCTCCTCCTaGCAGTTAGCACCTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TLLRPDWPHWRRESHTLSSSLSS*QLAPVL Trigger: AAGCACAGGTGCTAACTGCCAGGAGGAGAGTGAAGA...AGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR TCA 90 bp | GTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATTCTCGGTCTGGGTCCTaGCCTTGCTCTTTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VNFTLLRPDWPHWRRESHSRSGS*PCSFSS Trigger: TGAAGAGAAAGAGCAAGGTCAGGACCCAGACCGAGA...ATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GAGAATTCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGTCGCACGATGGCGTaGGTAACCGAGCTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ENSTTKFLTPKDRQGMTVCRTMA*VTELRS Trigger: GGACCTCAGCTCGGTTACGCACGCCATCGTGCGACA...AACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGAATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | GTCTGTCTTTGGAAGTTGCTTCCACTGACCAGGCTCTTGTATAACAGGGTAAGGCTGGCTTTCCTTCCCTaGTACCAGCATCCGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VCLWKLLPLTRLLYNRVRLAFLP*YQHPPA Trigger: TGCAGGCGGATGCTGGTACCAGGGAAGGAAAGCCAG...CCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | GTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATGTGTTTTGTCCTGCCTaGGAGTCACTCACTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VNFTLLRPDWPHWRRESHVFCPA*ESLTSL Trigger: GAGGGAAGTGAGTGACTCCCAGGCAGGACAAAACAC...ATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GCATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGGCTTCCCTCCACCTTTaGTCTCTGCAGCACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AYILGVNFTLLRPDWPHWASLHL*SLQHSL Trigger: GAGGCTGTGCTGCAGAGAGCAAAGGTGGAGGGAAGC...CCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GAGAATTCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTCTTCTCCCTCCTCACTaGTGTCCCCACTACCCACTG | + |
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Preference number: 4 (lower is better) Translates to: ENSTTKFLTPKDRQGMTVLLPPH*CPHYPL Trigger: CAGTGGGTAGTGGGGACAGCAGTGAGGAGGGAGAAG...AACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGAATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | TTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTTTGGTGTTTTGTCCTaGCTGGGAGTCACTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: FTLLRPDWPHWRRESHTLFGVLS*LGVTHF Trigger: GAAGTGAGTGACTCCCAGGCAGGACAAAACACCAAA...GAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | ACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTCACTTTGATAAAGTCTaGCTTTCCTTCCCTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: TLLRPDWPHWRRESHTLSHFDKV*LSFPGT Trigger: GGTACCAGGGAAGGAAAGCCAGACTTTATCAAAGTG...AGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR CAA 72 bp | GTCTGTCTTTGGAAGTTGCTTCCACTGACCAGGCTCTaGTATAACAGGGTAAGGTCCACCATGGACACGGGA | + |
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Preference number: 4 (lower is better) Translates to: VCLWKLLPLTRL*YNRVRSTMDTG Trigger: TCCCGTGTCCATGGTGGACCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR CAA 72 bp | CATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATaGGCCACACTGGAGGAGGGAGAGCCATACCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HSWSQLYIAKAR*ATLEEGEPYPL Trigger: GAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR TCA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTCTTCCAGCTCAGCCCTaGGGACACTCAGGCGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: IESLKTNNSPLKCLERMLLPAQP*GHSGAP Trigger: AGGCGCGCCTGAGTGTCCTCAGGGCTGAGCTGGAAG...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | TCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGGGACCTCTCTTCCCTAACCTaGTTCCTGTCTGCCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: STTKFLTPKDRQGMTVWDLSSLT*FLSALS Trigger: ACTCAAGGCAGACAGGAAGCAGGTTAGGGAAGAGAG...GTCCCAAACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATTCTCACTGCTGTCCCCACTaGCCACTGTGCCTCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GARTTLESIRERIRLLNSHCCPH*PLCLLP Trigger: AGGAAGGAGGCACAGTGGGCAGTGGGGACAGCAGTG...AGAATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GTCTGTCTTTGGAAGTTGCTTCCACTGACCAGGCTCTTGTATAACAGGGTAAGGTACTGTCATCCCTGCTaGTTGTGTTCTGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VCLWKLLPLTRLLYNRVRYCHPC*LCSASS Trigger: GGAGGAGGCAGAACACAAGCAGCAGGGATGACAGTA...CCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | ACAGGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATCTAGCCACAGCTGGGTaGTCCTCTCCACAGCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TGARTTLESIRERIRLLNLATAG*SSPQRE Trigger: CTCTCGCTGTGGAGAGGACCACCCAGCTGTGGCTAG...ATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GCATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGCTGCTTGCTCCTGTGTaGTGTTACTGTCATCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AYILGVNFTLLRPDWPHWLLAPV*CYCHPC Trigger: GCAGGGATGACAGTAACAGCACACAGGAGCAAGCAG...CCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTGCGCCTTGTGGGAGCTaGAGGAGCCCAGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: IESLKTNNSPLKCLERMLAPCGS*RSPAAS Trigger: AGAAGCTGCTGGGCTCCTGCAGCTCCCACAAGGCGC...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | GTCTGTCTTTGGAAGTTGCTTCCACTGACCAGGCTCTTGTATAACAGGGTAAGGGAACCTTTTCTTCTTTaGGTCACTGCAGGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VCLWKLLPLTRLLYNRVREPFLL*VTAGSR Trigger: CCTGCTCCCTGCAGTGACCCAAAGAAGAAAAGGTTC...CCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | ACAGGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATTCGCAAGCCTCCAGTTaGCCTCCCAGGCCTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TGARTTLESIRERIRLLNSQASS*PPRPAF Trigger: AAAAGCAGGCCTGGGAGGCCAACTGGAGGCTTGCGA...ATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | GCATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGTGCCCTTCTGACCTGTaGGTTCTGGACTCGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: AYILGVNFTLLRPDWPHWCPSDL*VLDSNL Trigger: CAGATTCGAGTCCAGAACCCACAGGTCAGAAGGGCA...CCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR TCA 90 bp | GCATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGGCTTCCTGTCTGCCTTaGGTGGTACTTGCTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: AYILGVNFTLLRPDWPHWASCLP*VVLACL Trigger: AAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGC...CCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GTCTGTCTTTGGAAGTTGCTTCCACTGACCAGGCTCTTGTATAACAGGGTAAGGCTCCAATCCCATCTTTaGATCCAGGTCTGTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VCLWKLLPLTRLLYNRVRLQSHL*IQVCLV Trigger: CACCAAACAGACCTGGATGCAAAGATGGGATTGGAG...CCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | GGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATTCTCTGCTTCCCCCTCACTaGTCTCCTCCAATCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: GARTTLESIRERIRLLNSLLPPH*SPPIPS Trigger: AGATGGGATTGGAGGAGAGCAGTGAGGGGGAAGCAG...AGAATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | ACAGGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATAAGGGTTCCCCTTCATaGCCAGTGCTTCCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TGARTTLESIRERIRLLNKGSPS*PVLPAQ Trigger: CTGAGCTGGAAGCACTGGGCATGAAGGGGAACCCTT...ATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | GAGAATTCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTCTTCCTCTCCTCTTTaGTGTTTTGTCCTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ENSTTKFLTPKDRQGMTVSSSPL*CFVLPG Trigger: CCCAGGCAGGACAAAACACCAAAGAGGAGAGGAAGA...AACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGAATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR GCA 90 bp | ATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGTTGGCCTCCCAGGCCTaGTTTTCTGCTTATAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: IHSWSQLYIAKARLATLELASQA*FSAYSS Trigger: AGAGCTATAAGCAGAAAAGCAGGCCTGGGAGGCCAA...CTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | ATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGCTGAGCCATCTGGACTaGATGGTGAAGAGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: IHSWSQLYIAKARLATLELSHLD*MVKSWI Trigger: AATCCAGCTCTTCACCATCCAGTCCAGATGGCTCAG...CTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | GCATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGTCCAGGTCTGTTTGGTaGTCTTCATCTGTGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: AYILGVNFTLLRPDWPHWSRSVW*SSSVLS Trigger: TGAGAGCACAGATGAAGACCACCAAACAGACCTGGA...CCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| 3UTR CAA 72 bp | AACTTGGATCCTGCCACTGTAGTCTGTCTTTGGAAGTaGCTTCCACTGACCAGGCTCTTGTATAACAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: NLDPATVVCLWK*LPLTRLLYNRV Trigger: TACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGACTACAGTGGCAGGATCCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS-3UTR CCA 90 bp | ATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGATGATATCACGCATATaGGACCAGTCTGGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSWSQLYIAKARLATLEMISRI*DQSGGA Trigger: AGCACCTCCAGACTGGTCCCATATGCGTGATATCAT...CTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR GCA 90 bp | GAGAATTCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTGGTGGTCTTCATCTGTaGTCTCAACTGCTTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ENSTTKFLTPKDRQGMTVGGLHL*SQLLSL Trigger: TAAAGAAAGCAGTTGAGAGCACAGATGAAGACCACC...AACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGAATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR GCA 90 bp | GGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATTCTCCTGGCTGTTCTCTCTaGTCTGTTACTTCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GARTTLESIRERIRLLNSPGCSL*SVTSGS Trigger: AGATCCAGAAGTAACAGAGCAGAGAGAACAGCCAGG...AGAATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CCA 90 bp | TCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGGGACTTAGACATGTCTTCTTaGTTGTCCTGTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: STTKFLTPKDRQGMTVWDLDMSS*LSCSLL Trigger: CAACAAAGAACAGGACAACCAAGAAGACATGTCTAA...GTCCCAAACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATGCTTGCTTTCTAACCTaGCCCTTCTGTTCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGARTTLESIRERIRLLNACFLT*PFCSCF Trigger: GAAACAAGAACAGAAGGGCCAGGTTAGAAAGCAAGC...ATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CCA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTCCTGTCTGCCTTGAGTaGTACTTGCTTGTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IESLKTNNSPLKCLERMLPVCLE*YLLVFG Trigger: GCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGG...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 90 bp | CAGAGCGCGACACTTCTCCAAGGAAGGGTTCCCCTTCATGCCCAGTaGTTCCAGCTCAGCCCTGAGGACACTCAGGCGCGCCTTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSATLLQGRVPLHAQ*FQLSPEDTQARLVG Trigger: TCCCACAAGGCGCGCCTGAGTGTCCTCAGGGCTGAGCTGGAAGCACTGGGCATGAAGGGGAACCCTTCCTTGGAGAAGTGTCGCGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS TCA 90 bp | GTCCAGGGTTCGGCGATAAGTCTCTCCTGGGGAGGTCCCTTCCCCTaGAGGGTTCCAGGCATTTCGTCTTCGTGGCCGGCCTGTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQGSAISLSWGGPFP*RVPGISSSWPACTA Trigger: AGCAGTACAGGCCGGCCACGAAGACGAAATGCCTGGAACCCTTCAGGGGAAGGGACCTCCCCAGGAGAGACTTATCGCCGAACCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 90 bp | TCCTCCTGGCAGTTAGCACCTGTGCTTCCCTCCACCTTTGCTCTCTaGAGCACAGCCTCCTCCTCACTGCTCCCACTCTCTTCCCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SSWQLAPVLPSTFAL*STASSSLLPLSSLT Trigger: GGTTAGGGAAGAGAGTGGGAGCAGTGAGGAGGAGGCTGTGCTGCAGAGAGCAAAGGTGGAGGGAAGCACAGGTGCTAACTGCCAGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 90 bp | ATGTTGGCAACATCCAGGGCAGCCACTTCAGCTGCCTCTTCCCGCTaGAGCTTCAGAGCGCGACACTTCTCCAAGGAAGGGTTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MLATSRAATSAASSR*SFRARHFSKEGFPF Trigger: GAAGGGGAACCCTTCCTTGGAGAAGTGTCGCGCTCTGAAGCTGCAGCGGGAAGAGGCAGCTGAAGTGGCTGCCCTGGATGTTGCCAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | TCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGGGACACACTCAGGCGCGCCTaGTGGGAGCTGCAGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: STTKFLTPKDRQGMTVWDTLRRA*WELQEP Trigger: GGGCTCCTGCAGCTCCCACAAGGCGCGCCTGAGTGT...GTCCCAAACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 90 bp | TGTACTGCTGATGATGTTGGCAACATCCAGGGCAGCCACTTCAGCTaGCTCTTCCCGCTGCAGCTTCAGAGCGCGACACTTCTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CTADDVGNIQGSHFS*LFPLQLQSATLLQG Trigger: TCCTTGGAGAAGTGTCGCGCTCTGAAGCTGCAGCGGGAAGAGGCAGCTGAAGTGGCTGCCCTGGATGTTGCCAACATCATCAGCAGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | GTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATCTCGCAAGCCTCCAGTaGGCCTCCCAGGCCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VNFTLLRPDWPHWRRESHLASLQ*ASQACF Trigger: AAAGCAGGCCTGGGAGGCCAACTGGAGGCTTGCGAG...ATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | ACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTCCGTTCTTGGAGCTCTaGTTGGAAGAGCGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLRPDWPHWRRESHTLSPFLEL*LEERLF Trigger: GAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGG...AGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS TCA 90 bp | CTGTCACCATTACTGCTGCCTAGGCTGCCTGACTTTGTAGTGCCTTaGGCAGCTGCTTGCTCCTGTGTGCTGTTACTGTCATCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSPLLLPRLPDFVVP*AAACSCVLLLSSLL Trigger: CAGCAGGGATGACAGTAACAGCACACAGGAGCAAGCAGCTGCTCAAGGCACTACAAAGTCAGGCAGCCTAGGCAGCAGTAATGGTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 90 bp | CTCCTCCTCACTGCTCCCACTCTCTTCCCTAACCTGCTTCCTGTCTaGCTTGAGTGGTACTTGCTTGTCTTTGGCCCCAGCTTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLTAPTLFPNLLPV*LEWYLLVFGPSLLS Trigger: AGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGCAGGTTAGGGAAGAGAGTGGGAGCAGTGAGGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | TGGGTCACTGCAGGGAGCAGGAGACCTCTTCACTTTGATAAAGTCTaGCTTTCCTTCCCTGGTACCAGCATCCGCCTGCATTTTCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WVTAGSRRPLHFDKV*LSFPGTSIRLHFRQ Trigger: CTGCCGAAAATGCAGGCGGATGCTGGTACCAGGGAAGGAAAGCCAGACTTTATCAAAGTGAAGAGGTCTCCTGCTCCCTGCAGTGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | ACTGCTCCCACTCTCTTCCCTAACCTGCTTCCTGTCTGCCTTGAGTaGTACTTGCTTGTCTTTGGCCCCAGCTTGCTTTCTAACCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TAPTLFPNLLPVCLE*YLLVFGPSLLSNLA Trigger: GGCCAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGCAGGTTAGGGAAGAGAGTGGGAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | GTGGGTTCTGGACTCGAATCTGATGAAGATGAACAACTTCGGGCCTaGCCGTTCTTGGAGCTCTTGTTGGAAGAGCGGCTCTTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSGLESDEDEQLRA*PFLELLLEERLFLS Trigger: GGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTCATCTTCATCAGATTCGAGTCCAGAACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | ACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTCTCTCTTCCTCTCCTCTTaGGTGTTTTGTCCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLRPDWPHWRRESHTLSLFLSS*VFCPAW Trigger: CCAGGCAGGACAAAACACCAAAGAGGAGAGGAAGAG...AGAGAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | CGTTCTTGGAGCTCTTGTTGGAAGAGCGGCTCTTCCTCTCCTCTTTaGTGTTTTGTCCTGCCTGGGAGTCACTCACTTCCCTCTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSWSSCWKSGSSSPL*CFVLPGSHSLPSLC Trigger: ACACAGAGAGGGAAGTGAGTGACTCCCAGGCAGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | GTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATGCCTTGAGCAGCTGCTaGCTCCTGTGTGCTGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: VNFTLLRPDWPHWRRESHALSSC*LLCAVT Trigger: AGTAACAGCACACAGGAGCAAGCAGCTGCTCAAGGC...ATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 90 bp | CTTGTTGGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTTTGTCCTaGCTGGGAGTCACTCACTTCCCTCTCTGTGTCACTGTCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: LVGRAALPLLFGVLS*LGVTHFPLCVTVTI Trigger: AATGGTGACAGTGACACAGAGAGGGAAGTGAGTGACTCCCAGGCAGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | TTGGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTTTGTCCTGCCTaGGAGTCACTCACTTCCCTCTCTGTGTCACTGTCACCATTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LEERLFLSSLVFCPA*ESLTSLSVSLSPLL Trigger: CAGTAATGGTGACAGTGACACAGAGAGGGAAGTGAGTGACTCCCAGGCAGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | ATGAAGATGAACAACTTCGGGCCTGGCCGTTCTTGGAGCTCTTGTTaGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTTTGTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MKMNNFGPGRSWSSC*KSGSSSPLWCFVLP Trigger: AGGCAGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTCATCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | GACTCGAATCTGATGAAGATGAACAACTTCGGGCCTGGCCGTTCTTaGAGCTCTTGTTGGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSNLMKMNNFGPGRS*SSCWKSGSSSPLWC Trigger: ACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTCATCTTCATCAGATTCGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | TTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCTGCATCCAGGTCTGTTaGGTGGTCTTCATCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTLLRPDWPHWRRESHTLCIQVC*VVFICA Trigger: AGCACAGATGAAGACCACCAAACAGACCTGGATGCA...GAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | GTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATCTCCTCTTTGGTGTTTaGTCCTGCCTGGGAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VNFTLLRPDWPHWRRESHLLFGV*SCLGVT Trigger: AGTGACTCCCAGGCAGGACAAAACACCAAAGAGGAG...ATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | TTGAGTGGTACTTGCTTGTCTTTGGCCCCAGCTTGCTTTCTAACCTaGCCCTTCTGTTCTTGTTTCATGTCCTCCTCTTCCTCGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LSGTCLSLAPACFLT*PFCSCFMSSSSSVT Trigger: GGTCACCGAGGAAGAGGAGGACATGAAACAAGAACAGAAGGGCCAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | TCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGGGACGGAACCTTTTCTTCTTaGGGTCACTGCAGGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: STTKFLTPKDRQGMTVWDGTFSS*GHCREQ Trigger: CTGCTCCCTGCAGTGACCCAAAGAAGAAAAGGTTCC...GTCCCAAACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTTGCTTCCCTCCACCTTaGCTCTCTGCAGCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ENSTTKFLTPKDRQGMTVCFPPP*LSAAQP Trigger: AGGCTGTGCTGCAGAGAGCAAAGGTGGAGGGAAGCA...AACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGAATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | TTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGAGGGAGAGCCATACCCTCGGAGACCTCTTCACTTaGATAAAGTCTGGCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FTLLRPDWPHWRRESHTLGDLFT*IKSGFP Trigger: AGGAAAGCCAGACTTTATCAAAGTGAAGAGGTCTCC...GAGGGTATGGCTCTCCCTCCTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGTCTTTGGAAGTTGCTTCCACTGACCAGGCTCTTGTATAACAGGGTAAGGTTCTTGGAGCTCTTGTaGGAAGAGCGGCTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCLWKLLPLTRLLYNRVRFLELL*EERLFL Trigger: GAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAA...CCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTCGACTACTAAATTCTTGACCCCAAAGGACAGACAGGGCATGACGGTTGTACTGCTGATGATGTaGGCAACATCCAGGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ENSTTKFLTPKDRQGMTVVLLMM*ATSRAA Trigger: GGCTGCCCTGGATGTTGCCAACATCATCAGCAGTAC...AACCGTCATGCCCTGTCTGTCCTTTGGGGTCAAGAATTTAGTAGTCGAATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS CCA 90 bp | CCCTCACTGCTCTCCTCCAATCCCATCTTTGCATCCAGGTCTGTTTaGTGGTCTTCATCTGTGCTCTCAACTGCTTTCTTTAAGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSLLSSNPIFASRSV*WSSSVLSTAFFKAL Trigger: AAGAGCCTTAAAGAAAGCAGTTGAGAGCACAGATGAAGACCACCAAACAGACCTGGATGCAAAGATGGGATTGGAGGAGAGCAGTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGTCTTTGGAAGTTGCTTCCACTGACCAGGCTCTTGTATAACAGGGTAAGGTGGTTGTCCTGTTCTTaGTTGAGGGTCCTGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VCLWKLLPLTRLLYNRVRWLSCS*LRVLSH Trigger: ATGGCTCAGGACCCTCAACAAAGAACAGGACAACCA...CCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCAAAGACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | ATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGAGGTCTGGGTCCTGACCTaGCTCTTTCTCTTCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: IHSWSQLYIAKARLATLEVWVLT*LFLFTE Trigger: CTCGGTGAAGAGAAAGAGCAAGGTCAGGACCCAGAC...CTCCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | GCATACATTCTTGGAGTCAACTTTACATTGCTAAGGCCAGATTGGCCACACTGGCTGGCCCTTCTGTTCTaGTTTCATGTCCTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AYILGVNFTLLRPDWPHWLALLF*FHVLLF Trigger: GAAGAGGAGGACATGAAACAAGAACAGAAGGGCCAG...CCAGTGTGGCCAATCTGGCCTTAGCAATGTAAAGTTGACTCCAAGAATGTATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTCGGGCCTGGCCGTTCTaGGAGCTCTTGTTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IESLKTNNSPLKCLERMLRAWPF*ELLLEE Trigger: CTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCG...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | ACAGGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATTTGTCCTGTTCTTTGTaGAGGGTCCTGAGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGARTTLESIRERIRLLNLSCSL*RVLSHL Trigger: CAGATGGCTCAGGACCCTCAACAAAGAACAGGACAA...ATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS-3UTR CAA 90 bp | ATTGAGTCTTTAAAAACAAACAACAGTCCACTCAAATGCCTGGAGAGGATGCTTGTCTTTGGCCCCAGCTaGCTTTCTAACCTGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IESLKTNNSPLKCLERMLVFGPS*LSNLAL Trigger: AAGGGCCAGGTTAGAAAGCAAGCTGGGGCCAAAGAC...AAGCATCCTCTCCAGGCATTTGAGTGGACTGTTGTTTGTTTTTAAAGACTCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 90 bp | CCAATCCCATCTTTGCATCCAGGTCTGTTTGGTGGTCTTCATCTGTaGTCTCAACTGCTTTCTTTAAGGCTCTTCTTAGACATGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PIPSLHPGLFGGLHL*SQLLSLRLFLDMSS Trigger: AGAAGACATGTCTAAGAAGAGCCTTAAAGAAAGCAGTTGAGAGCACAGATGAAGACCACCAAACAGACCTGGATGCAAAGATGGGATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCTAGGACAACTCTGGAATCGATAAGAGAGAGAATTCGACTACTAAATTCTCTTAGACATGTCTTCTaGGTTGTCCTGTTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GARTTLESIRERIRLLNSLRHVF*VVLFFV Trigger: AACAAAGAACAGGACAACCAAGAAGACATGTCTAAG...AGAATTTAGTAGTCGAATTCTCTCTCTTATCGATTCCAGAGTTGTCCTAGCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS TCA 72 bp | TCGGCGATAAGTCTCTCCTGGGGAGGTCCCTTCCCCTaGAGGGTTCCAGGCATTTCGTCTTCGTGGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAISLSWGGPFP*RVPGISSSWPA Trigger: GGCCGGCCACGAAGACGAAATGCCTGGAACCCTTCAGGGGAAGGGACCTCCCCAGGAGAGACTTATCGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS TCA 72 bp | CCAGTCTGGAGGTGCTTGGCGCGGCTGCTCCTCTTCTaGGTCCAGGGTTCGGCGATAAGTCTCTCCTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVWRCLARLLLF*VQGSAISLSWG Trigger: TCCCCAGGAGAGACTTATCGCCGAACCCTGGACTCAGAAGAGGAGCAGCCGCGCCAAGCACCTCCAGACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
||
| CDS GCA 72 bp | ACATCCAGGGCAGCCACTTCAGCTGCCTCTTCCCGCTaGAGCTTCAGAGCGCGACACTTCTCCAAGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSRAATSAASSR*SFRARHFSKEG Trigger: CCCTTCCTTGGAGAAGTGTCGCGCTCTGAAGCTGCAGCGGGAAGAGGCAGCTGAAGTGGCTGCCCTGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CCA 72 bp | CTGCTGTCACCGTCACTGCTGATGATATCACGCATATaGGACCAGTCTGGAGGTGCTTGGCGCGGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLSPSLLMISRI*DQSGGAWRGCS Trigger: GGAGCAGCCGCGCCAAGCACCTCCAGACTGGTCCCATATGCGTGATATCATCAGCAGTGACGGTGACAGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | TTCCAGGCATTTCGTCTTCGTGGCCGGCCTGTACTGCTGATGATGTaGGCAACATCCAGGGCAGCCACTTCAGCTGCCTCTTCCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FQAFRLRGRPVLLMM*ATSRAATSAASSRC Trigger: GCAGCGGGAAGAGGCAGCTGAAGTGGCTGCCCTGGATGTTGCCAACATCATCAGCAGTACAGGCCGGCCACGAAGACGAAATGCCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS GCA 72 bp | GATGATGTTGGCAACATCCAGGGCAGCCACTTCAGCTaGCTCTTCCCGCTGCAGCTTCAGAGCGCGACACTT | + |
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Preference number: 6 (lower is better) Translates to: DDVGNIQGSHFS*LFPLQLQSATL Trigger: AAGTGTCGCGCTCTGAAGCTGCAGCGGGAAGAGGCAGCTGAAGTGGCTGCCCTGGATGTTGCCAACATCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CCA 72 bp | ATGATATCACGCATATGGGACCAGTCTGGAGGTGCTTaGCGCGGCTGCTCCTCTTCTGAGTCCAGGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: MISRIWDQSGGA*RGCSSSESRVR Trigger: CCGAACCCTGGACTCAGAAGAGGAGCAGCCGCGCCAAGCACCTCCAGACTGGTCCCATATGCGTGATATCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS GCA 72 bp | TGTGTGCTGTTACTGTCATCCCTGCTGCTTGTGTTCTaGCTCCTCCCACTCTCGGTCTGGGTCCTGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: CVLLLSSLLLVF*LLPLSVWVLTL Trigger: CAAGGTCAGGACCCAGACCGAGAGTGGGAGGAGGCAGAACACAAGCAGCAGGGATGACAGTAACAGCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS GCA 72 bp | CAGCTGCTTGCTCCTGTGTGCTGTTACTGTCATCCCTaGTGCTTGTGTTCTGCCTCCTCCCACTCTCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: QLLAPVCCYCHP*CLCSASSHSRS Trigger: AGACCGAGAGTGGGAGGAGGCAGAACACAAGCAGCAGGGATGACAGTAACAGCACACAGGAGCAAGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CCA 72 bp | GGTCCTCTCCACAGCGAGAGGCAGCCTTCCGACCTGTaGGTTCTGGACCTGAATCTGATGAAGATGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GPLHSERQPSDL*VLDLNLMKMRN Trigger: GTTCCTCATCTTCATCAGATTCAGGTCCAGAACCCACAGGTCGGAAGGCTGCCTCTCGCTGTGGAGAGGACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS GCA 72 bp | ACTGCTCCCACTCTCTTCCCTAACCTGCTTCCTGTCTaGCTTGAGTGGTACTTGCTTGTCTTTGGCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TAPTLFPNLLPV*LEWYLLVFGPS Trigger: GCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGCAGGTTAGGGAAGAGAGTGGGAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | CAGAGCCCTCTGCTTCCCCCTCACTGCTCTCCTCCAATCCCATCTTaGCATCCAGGTCTGTTTGGTGGTCTTCATCTGTGCTCTCAACTG | + |
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Preference number: 6 (lower is better) Translates to: QSPLLPPHCSPPIPS*HPGLFGGLHLCSQL Trigger: CAGTTGAGAGCACAGATGAAGACCACCAAACAGACCTGGATGCAAAGATGGGATTGGAGGAGAGCAGTGAGGGGGAAGCAGAGGGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS CAA 90 bp | GGAGCTCTTGTTGGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTTaGTCCTGCCTGGGAGTCACTCACTTCCCTCTCTGTGTCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: GALVGRAALPLLFGV*SCLGVTHFPLCVTV Trigger: GACAGTGACACAGAGAGGGAAGTGAGTGACTCCCAGGCAGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | CCGTTCTTGGAGCTCTTGTTGGAAGAGCGGCTCTTCCTCTCCTCTTaGGTGTTTTGTCCTGCCTGGGAGTCACTCACTTCCCTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PFLELLLEERLFLSS*VFCPAWESLTSLSV Trigger: CACAGAGAGGGAAGTGAGTGACTCCCAGGCAGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CCA 72 bp | GCAGGGAGCAGGAGACCTCTTCACTTTGATAAAGTCTaGCTTTCCTTCCCTGGTACCAGCATCCGCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: AGSRRPLHFDKV*LSFPGTSIRLH Trigger: ATGCAGGCGGATGCTGGTACCAGGGAAGGAAAGCCAGACTTTATCAAAGTGAAGAGGTCTCCTGCTCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS CCA 72 bp | CTGATGAAGATGAACAACTTCGGGCCTGGCCGTTCTTaGAGCTCTTGTTGGAAGAGCGGCTCTTCCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LMKMNNFGPGRS*SSCWKSGSSSP Trigger: AGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTCATCTTCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CCA 72 bp | GGACTCGAATCTGATGAAGATGAACAACTTCGGGCCTaGCCGTTCTTGGAGCTCTTGTTGGAAGAGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GLESDEDEQLRA*PFLELLLEERL Trigger: GAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTCATCTTCATCAGATTCGAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 72 bp | GGCCCCAGCTTGCTTTCTAACCTGGCCCTTCTGTTCTaGTTTCATGTCCTCCTCTTCCTCGGTGACCTTACC | + |
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Preference number: 6 (lower is better) Translates to: GPSLLSNLALLF*FHVLLFLGDLT Trigger: GGTAAGGTCACCGAGGAAGAGGAGGACATGAAACAAGAACAGAAGGGCCAGGTTAGAAAGCAAGCTGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 72 bp | CTAACCTGCTTCCTGTCTGCCTTGAGTGGTACTTGCTaGTCTTTGGCCCCAGCTTGCTTTCTAACCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LTCFLSALSGTC*SLAPACFLTWP Trigger: GGGCCAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGCAGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 72 bp | GAACAACTTCGGGCCTGGCCGTTCTTGGAGCTCTTGTaGGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: EQLRAWPFLELL*EERLFLSSLVF Trigger: AAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | TCCTCACTGCTCCCACTCTCTTCCCTAACCTGCTTCCTGTCTGCCTaGAGTGGTACTTGCTTGTCTTTGGCCCCAGCTTGCTTTCTAACC | + |
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Preference number: 6 (lower is better) Translates to: SSLLPLSSLTCFLSA*SGTCLSLAPACFLT Trigger: GGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGCAGGTTAGGGAAGAGAGTGGGAGCAGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | GATGAAGATGAACAACTTCGGGCCTGGCCGTTCTTGGAGCTCTTGTaGGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTTTGTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DEDEQLRAWPFLELL*EERLFLSSLVFCPA Trigger: GGCAGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTCATCTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS TCA 72 bp | TTGTTTCATGTCCTCCTCTTCCTCGGTGACCTTACCTaGTCTAACAGAGCCCTCTGCTTCCCCCTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LFHVLLFLGDLT*SNRALCFPLTA Trigger: AGCAGTGAGGGGGAAGCAGAGGGCTCTGTTAGATCAGGTAAGGTCACCGAGGAAGAGGAGGACATGAAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS TCA 72 bp | TTACTGCTGCCTAGGCTGCCTGACTTTGTAGTGCCTTaGGCAGCTGCTTGCTCCTGTGTGCTGTTACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LLLPRLPDFVVP*AAACSCVLLLS Trigger: TGACAGTAACAGCACACAGGAGCAAGCAGCTGCTCAAGGCACTACAAAGTCAGGCAGCCTAGGCAGCAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS GCA 72 bp | TCCCTAACCTGCTTCCTGTCTGCCTTGAGTGGTACTTaGTTGTCTTTGGCCCCAGCTTGCTTTCTAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLTCFLSALSGT*LSLAPACFLTW Trigger: CCAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGCAGGTTAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CCA 72 bp | AACAACTTCGGGCCTGGCCGTTCTTGGAGCTCTTGTTaGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: NNFGPGRSWSSC*KSGSSSPLWCF Trigger: AAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | CTTTTCTTCTTTGGGTCACTGCAGGGAGCAGGAGACCTCTTCACTTaGATAAAGTCTGGCTTTCCTTCCCTGGTACCAGCATCCGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFFFGSLQGAGDLFT*IKSGFPSLVPASAC Trigger: GCAGGCGGATGCTGGTACCAGGGAAGGAAAGCCAGACTTTATCAAAGTGAAGAGGTCTCCTGCTCCCTGCAGTGACCCAAAGAAGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS CAA 90 bp | CTTCCTGTCTGCCTTGAGTGGTACTTGCTTGTCTTTGGCCCCAGCTaGCTTTCTAACCTGGCCCTTCTGTTCTTGTTTCATGTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPVCLEWYLLVFGPS*LSNLALLFLFHVLL Trigger: GAGGAGGACATGAAACAAGAACAGAAGGGCCAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | TCTGATGAAGATGAACAACTTCGGGCCTGGCCGTTCTTGGAGCTCTaGTTGGAAGAGCGGCTCTTCCTCTCCTCTTTGGTGTTTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SDEDEQLRAWPFLEL*LEERLFLSSLVFCP Trigger: AGGACAAAACACCAAAGAGGAGAGGAAGAGCCGCTCTTCCAACAAGAGCTCCAAGAACGGCCAGGCCCGAAGTTGTTCATCTTCATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 72 bp | TTTGGGTCACTGCAGGGAGCAGGAGACCTCTTCACTTaGATAAAGTCTGGCTTTCCTTCCCTGGTACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FGSLQGAGDLFT*IKSGFPSLVPA Trigger: TGCTGGTACCAGGGAAGGAAAGCCAGACTTTATCAAAGTGAAGAGGTCTCCTGCTCCCTGCAGTGACCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS CAA 72 bp | TTCCCTAACCTGCTTCCTGTCTGCCTTGAGTGGTACTaGCTTGTCTTTGGCCCCAGCTTGCTTTCTAACCTG | + |
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Preference number: 6 (lower is better) Translates to: FPNLLPVCLEWY*LVFGPSLLSNL Trigger: CAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCAGACAGGAAGCAGGTTAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CCA 72 bp | ACTTGCTTGTCTTTGGCCCCAGCTTGCTTTCTAACCTaGCCCTTCTGTTCTTGTTTCATGTCCTCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TCLSLAPACFLT*PFCSCFMSSSS Trigger: GGAAGAGGAGGACATGAAACAAGAACAGAAGGGCCAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 72 bp | CTCTTCTTAGACATGTCTTCTTGGTTGTCCTGTTCTTaGTTGAGGGTCCTGAGCCATCTGGACTGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: LFLDMSSWLSCS*LRVLSHLDWMV Trigger: CACCATCCAGTCCAGATGGCTCAGGACCCTCAACAAAGAACAGGACAACCAAGAAGACATGTCTAAGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS CAA 72 bp | TGCCTTGAGTGGTACTTGCTTGTCTTTGGCCCCAGCTaGCTTTCTAACCTGGCCCTTCTGTTCTTGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: CLEWYLLVFGPS*LSNLALLFLFH Trigger: ATGAAACAAGAACAGAAGGGCCAGGTTAGAAAGCAAGCTGGGGCCAAAGACAAGCAAGTACCACTCAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037248.10 |
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| CDS CAA 90 bp | GTGCTCTCAACTGCTTTCTTTAAGGCTCTTCTTAGACATGTCTTCTaGGTTGTCCTGTTCTTTGTTGAGGGTCCTGAGCCATCTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: VLSTAFFKALLRHVF*VVLFFVEGPEPSGL Trigger: CAGTCCAGATGGCTCAGGACCCTCAACAAAGAACAGGACAACCAAGAAGACATGTCTAAGAAGAGCCTTAAAGAAAGCAGTTGAGAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS CAA 72 bp | TTCTTAGACATGTCTTCTTGGTTGTCCTGTTCTTTGTaGAGGGTCCTGAGCCATCTGGACTGGATGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FLDMSSWLSCSL*RVLSHLDWMVK Trigger: CTTCACCATCCAGTCCAGATGGCTCAGGACCCTCAACAAAGAACAGGACAACCAAGAAGACATGTCTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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| CDS CAA 72 bp | ACTGCTTTCTTTAAGGCTCTTCTTAGACATGTCTTCTaGGTTGTCCTGTTCTTTGTTGAGGGTCCTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TAFFKALLRHVF*VVLFFVEGPEP Trigger: TGGCTCAGGACCCTCAACAAAGAACAGGACAACCAAGAAGACATGTCTAAGAAGAGCCTTAAAGAAAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037248.10 ENSMUST00000132808.2 |
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