Pregenerated sensors for HIPK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027177Ensembl transcript IDs: ENSMUST00000028600.14, ENSMUST00000111124.8, ENSMUST00000111125.3
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATGAGCACTTaGATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTC | + |
Preference number: 1 (lower is better) Translates to: VCPSKEGAHHESMST*ISSHYLLKSCLLHL Trigger: GAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR GCA 90 bp | GCTTATCGCCAGCGTGTGCGAGAGTTGTACTGGTGGTACACAACCTaGTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTAC | + |
Preference number: 1 (lower is better) Translates to: AYRQRVRELYWWYTT*LVRKCVNPKHLEVY Trigger: GTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTGTACCACCAGTACAACTCTCGCACACGCTGGCGATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR CCA 90 bp | CATGTATCAGAGTTAGCTTATCGCCAGCGTGTGCGAGAGTTGTACTaGTGGTACACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAA | + |
Preference number: 1 (lower is better) Translates to: HVSELAYRQRVRELY*WYTTCLVRKCVNPK Trigger: TTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTGTACCACCAGTACAACTCTCGCACACGCTGGCGATAAGCTAACTCTGATACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR TCA 90 bp | GCTTTTTGTGACAAAGTACAGAAGGCTTGGTCACATTTAAATCACTaGGAACTAGAGAGAAATACTATCGCAAACTGTAATAGACATTAC | + |
Preference number: 1 (lower is better) Translates to: AFCDKVQKAWSHLNH*ELERNTIANCNRHY Trigger: GTAATGTCTATTACAGTTTGCGATAGTATTTCTCTCTAGTTCTCAGTGATTTAAATGTGACCAAGCCTTCTGTACTTTGTCACAAAAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAAGTCTAGACACAGAATaGCTTCCCAAATGTGGACGT | + |
Preference number: 2 (lower is better) Translates to: VLNTARSAQARRAHIMSRSLDTE*LPKCGR Trigger: ACGTCCACATTTGGGAAGCCATTCTGTGTCTAGACT...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR CCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAAATGGCTTCCCAAATGTaGACGTGTCTTGCACTAGTT | + |
Preference number: 2 (lower is better) Translates to: ATFLPVVTQSIRVLGVSEMASQM*TCLALV Trigger: AACTAGTGCAAGACACGTCCACATTTGGGAAGCCAT...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR GCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACGCAAAACTGGACTTTTaGTCCCATAAGTCACCTGTC | + |
Preference number: 2 (lower is better) Translates to: PSLGNVLPMQKTHANVKNAKLDF*SHKSPV Trigger: GACAGGTGACTTATGGGAGCAAAAGTCCAGTTTTGC...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR TCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCAAACGTTTGTATCATTaGGCTTCCTCAATAGACTGC | + |
Preference number: 2 (lower is better) Translates to: HHESMSTCISSHYLLKSCKRLYH*ASSIDC Trigger: GCAGTCTATTGAGGAAGCTCAATGATACAAACGTTT...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR CCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACTTAAGGCACTATGTGTaGGAACGGTTACAATGCAGC | + |
Preference number: 2 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHLRHYV*ERLQCS Trigger: GCTGCATTGTAACCGTTCCCACACATAGTGCCTTAA...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR TCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAGTCCTTCATTTGCAGTaGCTAGAAATGTGCTGCTGG | + |
Preference number: 2 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLVLHLQ*LEMCCW Trigger: CCAGCAGCACATTTCTAGTCACTGCAAATGAAGGAC...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR GCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTCACATGTGCATCTGTTaGTCTAAGTCTAGACACAGA | + |
Preference number: 2 (lower is better) Translates to: LHFLSLSTQVMPTAPLNIHMCIC*SKSRHR Trigger: TCTGTGTCTAGACTTAGAGCAACAGATGCACATGTG...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR TCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTCGGTTACAATGCAGCTaGGAGTATTACAACAACATT | + |
Preference number: 2 (lower is better) Translates to: LHFLSLSTQVMPTAPLNIRLQCS*EYYNNI Trigger: AATGTTGTTGTAATACTCTCAGCTGCATTGTAACCG...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR GCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTGAATTATAAGTGCTaGAGTCCAACATTTACAGAT | + |
Preference number: 2 (lower is better) Translates to: HHESMSTCISSHYLLKSCLNYKC*SPTFTD Trigger: ATCTGTAAATGTTGGACTGCAGCACTTATAATTCAG...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR GCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAAAGTTAAGTCAAGCCTaGAAGATACAGCTTTCTCAC | + |
Preference number: 2 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLKLSQA*KIQLSH Trigger: GTGAGAAAGCTGTATCTTGCAGGCTTGACTTAACTT...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR GCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAAAAATCCAGGTCCTCTaGCAGGATGCTAAAATTAGA | + |
Preference number: 2 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLKIQVL*QDAKIR Trigger: TCTAATTTTAGCATCCTGGCAGAGGACCTGGATTTT...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR TCA 72 bp | CTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATaGGTCGATGAGCACTTGCATTTCCTCTCATTATCT | + |
Preference number: 3 (lower is better) Translates to: LHGLPKQGGRTS*VDEHLHFLSLS Trigger: AGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR TCA 72 bp | CAAGCACAGCTTGCTGGGCCACTTTCCTCCCTGTCGTaGCACAATCAATCCGTGTACTTGGTGTCTCTGAAA | + |
Preference number: 3 (lower is better) Translates to: QAQLAGPLSSLS*HNQSVYLVSLK Trigger: TTTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGCCCAGCAAGCTGTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR TCA 72 bp | TCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATaGGCACTTGCATTTCCTCTCATTATCTACTCAAGT | + |
Preference number: 3 (lower is better) Translates to: SAQARRAHIMSR*ALAFPLIIYSS Trigger: ACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR CCA 72 bp | GAGTTAGCTTATCGCCAGCGTGTGCGAGAGTTGTACTaGTGGTACACAACCTGCTTAGTAAGGAAATGTGTC | + |
Preference number: 3 (lower is better) Translates to: ELAYRQRVRELY*WYTTCLVRKCV Trigger: GACACATTTCCTTACTAAGCAGGTTGTGTACCACCAGTACAACTCTCGCACACGCTGGCGATAAGCTAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR GCA 72 bp | AATATTCTGCTACTATGTGTTAAATACTGCACGGTCTaGCCAAGCAAGGAGGGCGCACATCATGAGTCGATG | + |
Preference number: 3 (lower is better) Translates to: NILLLCVKYCTV*PSKEGAHHESM Trigger: CATCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACACATAGTAGCAGAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR CAA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGCAAACGTTTGTATCATaGAGCTTCCTCAATAGACTG | + |
Preference number: 3 (lower is better) Translates to: VKATSFKHHHHHHQGERGQTFVS*SFLNRL Trigger: CAGTCTATTGAGGAAGCTCAATGATACAAACGTTTG...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR CCA 72 bp | TGCTCTAAGTCTAGACACAGAATGGCTTCCCAAATGTaGACGTGTCTTGCACTAGTTAGAAGGCAATTTTAT | + |
Preference number: 3 (lower is better) Translates to: CSKSRHRMASQM*TCLALVRRQFY Trigger: ATAAAATTGCCTTCTAACTAGTGCAAGACACGTCCACATTTGGGAAGCCATTCTGTGTCTAGACTTAGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR-3UTR CAA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTAGCACTACTAACTGCTaGCTTTTCTTGAAGCTAGAT | + |
Preference number: 3 (lower is better) Translates to: LHFLSLSTQVMPTAPLNISTTNC*LFLKLD Trigger: ATCTAGCTTCAAGAAAAGCAAGCAGTTAGTAGTGCT...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR GCA 72 bp | GCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTaGACCTCTAAACATTTTATCAAGTCCAATTATACA | + |
Preference number: 3 (lower is better) Translates to: AFPLIIYSSHAY*TSKHFIKSNYT Trigger: TGTATAATTGGACTTGATAAAATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR TCA 72 bp | ACTAAGCCATTGAATCTATCATTGGGATCGTTAAAATaGATCTTCCTACACCTTGCAGTGTATGATTTAACT | + |
Preference number: 3 (lower is better) Translates to: TKPLNLSLGSLK*IFLHLAVYDLT Trigger: AGTTAAATCATACACTGCAAGGTGTAGGAAGATTCATTTTAACGATCCCAATGATAGATTCAATGGCTTAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAAGGGCAGGAGGCTGGTaGAGCTTTCCGGGGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRRAGGW*SFPGAG Trigger: GCCTGCCCCCGGAAAGCTGCACCAGCCTCCTGCCCT...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGCCCAGGGCAGGAGGCTaGTGCAGCTTTCCGGGGGCA | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGPRAGG*CSFPGA Trigger: TGCCCCCGGAAAGCTGCACCAGCCTCCTGCCCTGGG...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR CAA 72 bp | AATACAGAGAGAGCACGCCTAGGCAGCAAGCACAGCTaGCTGGGCCACTTTCCTCCCTGTCGTGACACAATC | + |
Preference number: 4 (lower is better) Translates to: NTERARLGSKHS*LGHFPPCRDTI Trigger: GATTGTGTCACGACAGGGAGGAAAGTGGCCCAGCAAGCTGTGCTTGCTGCCTAGGCGTGCTCTCTCTGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATTGGTAGTGGCAGGCTaGGGCCAGACAACATGTGCA | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRLVVAG*GQTTCA Trigger: TGCACATGTTGTCTGGCCTCAGCCTGCCACTACCAA...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGTCCACAACCGAACTGTaGAGTCCCCGCCTGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGSTTEL*SPRLQR Trigger: CCTCTGCAGGCGGGGACTGCACAGTTCGGTTGTGGA...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAGGGGTTTATGCCCACTaGGACTTGGTGAACTATGCC | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRGVYAH*DLVNYA Trigger: GGCATAGTTCACCAAGTCCCAGTGGGCATAAACCCC...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACCGGGCTGGACTGCCCTaGGGAGCTGGTGCTCAGAGT | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNRAGLP*GAGAQS Trigger: ACTCTGAGCACCAGCTCCTCAGGGCAGTCCAGCCCG...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATTTAACCCGCATCGCTaGGGCCCTTCTAGGAAATGT | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRFNPHR*GPSRKC Trigger: ACATTTCCTAGAAGGGCCCCAGCGATGCGGGTTAAA...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACTGCAAGGGGACGGGCTaGACTGCCCTGAGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNCKGTG*TALRSW Trigger: CCAGCTCCTCAGGGCAGTCCAGCCCGTCCCCTTGCA...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGCAGTCTCCAAGCCTCTaGGAACCAGCCATGCCTTCA | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGQSPSL*EPAMPS Trigger: TGAAGGCATGGCTGGTTCTCAGAGGCTTGGAGACTG...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACCACCACGGCCCGCGGTaGCTCCACTCCAGCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDHHGPR*LHSSLL Trigger: CAGCAGGCTGGAGTGGAGGCACCGCGGGCCGTGGTG...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGACAACCTGGCCAAAAGTaGCACGACCAAGAAAATCCA | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRQPGQK*HDQENP Trigger: TGGATTTTCTTGGTCGTGGCACTTTTGGCCAGGTTG...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGGCCATGGGTGTTACCTaGTGCCAGGCAGGTATTAGC | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGAMGVT*CQAGIS Trigger: GCTAATACCTGCCTGGCAGCAGGTAACACCCATGGC...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACGGAGAGGCTAGGAGGTaGGCCACGGGTGCAGCACTA | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNGEARR*ATGAAL Trigger: TAGTGCTGCACCCGTGGCCCACCTCCTAGCCTCTCC...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAAGGTTCAAATGCTGCTaGGGGAACGCTGCTGCGGGC | + |
Preference number: 4 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKRFKCC*GNAAAG Trigger: GCCCGCAGCAGCGTTCCCTCAGCAGCATTTGAACCT...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATCCAGTATACGCAGGTaGTGCTGCAATGTAAGAATG | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRSSIRR*CCNVRM Trigger: CATTCTTACATTGCAGCATCACCTGCGTATACTGGA...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACACTCCAGGTCGGATCTaGAGAGGCTGCACAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNTPGRI*RGCTAG Trigger: CCCAGCTGTGCAGCCTCTGCAGATCCGACCTGGAGT...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATCTGAGAACCAGCCATaGCTTCAGAAGTTAGTGTTG | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRSENQP*LQKLVL Trigger: CAACACTAACTTCTGAAGGCATGGCTGGTTCTCAGA...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTGAGGTGGGCCACGGGTaGAGCACTACTGAGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNIEVGHG*STTEGG Trigger: GCCTCCCTCAGTAGTGCTGCACCCGTGGCCCACCTC...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAATCTGCTTCGATCCTGTaGTCGCTGTCACAACTGTCA | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSESASIL*SLSQLS Trigger: TGACAGTTGTGACAGCGACCACAGGATCGAAGCAGA...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAATTTCTTCAGTGCAGTaGCCACTTGCTGAAGAACAG | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRISSVQ*PLAEEQ Trigger: CTGTTCTTCAGCAAGTGGCCACTGCACTGAAGAAAT...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGTTAACCCTGTACGGCTaGCGAACAGGATCCACCAAC | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGLTLYG*RTGSTN Trigger: GTTGGTGGATCCTGTTCGCCAGCCGTACAGGGTTAA...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCCAGAGGCTGCACAGCTaGGGCCTGAGTTACAAGCGG | + |
Preference number: 4 (lower is better) Translates to: HHESMSTCISSHYLLKSCQRLHS*GLSYKR Trigger: CCGCTTGTAACTCAGGCCCCAGCTGTGCAGCCTCTG...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGACTGTTCTCTGCAAATaGACTGTCGTGCCCCGAGGA | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGTVLCK*TVVPRG Trigger: TCCTCGGGGCACGACAGTCCATTTGCAGAGAACAGT...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATATCGTCCAGACTGTTaGATATGTACTTTCTGGCCT | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRYRPDC*ICTFWP Trigger: AGGCCAGAAAGTACATATTCAACAGTCTGGACGATA...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCCCCACTGGGACTTGGTaGACTATGCCACTGGGATGG | + |
Preference number: 4 (lower is better) Translates to: HHESMSTCISSHYLLKSCPTGTW*TMPLGW Trigger: CCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGG...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAACTTCATTCCTGTCTCTaGCTCATGCTCTTCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSELHSCL*LMLFQC Trigger: ACACTGGAAGAGCATGAGGCAGAGACAGGAATGAAG...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCGCCCTGAGGAGCTGGTaGTCAGAGTGCTATCAGGAC | + |
Preference number: 4 (lower is better) Translates to: HHESMSTCISSHYLLKSCALRSW*SECYQD Trigger: GTCCTGATAGCACTCTGAGCACCAGCTCCTCAGGGC...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACTGCTGTTCGGTCTCTTaGAAGGGGACGGGCTGGACT | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNCCSVS*KGTGWT Trigger: AGTCCAGCCCGTCCCCTTGCAAGAGACCGAACAGCA...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAACACAAAACTGTTCTCTaGAAATGGACTGTCGTGCCC | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSEHKTVL*KWTVVP Trigger: GGGCACGACAGTCCATTTGCAGAGAACAGTTTTGTG...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAGTAATGATTGCTGTGTaGAATCATTTTCCCCCAGTC | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRVMIAV*NHFPPV Trigger: GACTGGGGGAAAATGATTCCACACAGCAATCATTAC...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAAACTGAGTCTGATGAATaGTTGGGGATGGTAACAGGC | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSETESDE*LGMVTG Trigger: GCCTGTTACCATCCCCAACCATTCATCAGACTCAGT...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACGGCACCTGCCTGCAATaGAAAGCTGTGTCCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDGTCLQ*KAVSSR Trigger: CCTCGAGGACACAGCTTTTCATTGCAGGCAGGTGCC...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACTGCATCGCGCCGCTGTaGTTCTCCAACTCCTCACTC | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDCIAPL*FSNSSL Trigger: GAGTGAGGAGTTGGAGAATCACAGCGGCGCGATGCA...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAAAATACCTTGGATAGCTaGGGGACAGATAATCAGGGT | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSENTLDS*GTDNQG Trigger: ACCCTGATTATCTGTCCCCCAGCTATCCAAGGTATT...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACACTGCCCTGAGGAGCTaGTGCTCAGAGTGCTATCAG | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNTALRS*CSECYQ Trigger: CTGATAGCACTCTGAGCACCAGCTCCTCAGGGCAGT...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTTTCTCTCCCCACCGGTaGCTCCACAGCAGTGCCAAC | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNIFSPHR*LHSSAN Trigger: GTTGGCACTGCTGTGGAGCCACCGGTGGGGAGAGAA...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGCTGGCCTTTTCTCAATaGCTGGCATGTAGAATCCGT | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGLAFSQ*LACRIR Trigger: ACGGATTCTACATGCCAGCCATTGAGAAAAGGCCAG...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGACACATATATGGATACTaGCTGAGTTTTGTTGGACTC | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRHIYGY*LSFVGL Trigger: GAGTCCAACAAAACTCAGCCAGTATCCATATATGTG...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGATCACGCATCCCAGTaGCCACATGTCTATGGCTTC | + |
Preference number: 4 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKDHASQ*PHVYGF Trigger: GAAGCCATAGACATGTGGTCACTGGGATGCGTGATC...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAAGACCATGTCTGCTGTaGAAGGACTCCAGGTCGGAT | + |
Preference number: 4 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKRPCLL*KDSRSD Trigger: ATCCGACCTGGAGTCCTTTCACAGCAGACATGGTCT...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACGTGCCCCGAGGAGTCTaGTGTTGGAGAGCCATCCAC | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDVPRGV*CWRAIH Trigger: GTGGATGGCTCTCCAACATCAGACTCCTCGGGGCAC...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCAGGCCAGACAACATGTaGAATGCCCACGCTGATAGG | + |
Preference number: 4 (lower is better) Translates to: HHESMSTCISSHYLLKSCRPDNM*NAHADR Trigger: CCTATCAGCGTGGGCATTGCACATGTTGTCTGGCCT...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGCCCCAATATAATCTCTaGAGCTCTGTAGTAGCGAGA | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGPQYNL*SSVVAR Trigger: TCTCGCTACTACAGAGCTCCAGAGATTATATTGGGG...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAATATTAACGAATGGGTaGTTCAGAGTCTCAATTGGA | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRILTNG*FRVSIG Trigger: TCCAATTGAGACTCTGAACCACCCATTCGTTAATAT...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTACGGCAGCAGGAGCCATaGGTGTTACCTGCTGCCAGG | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLRQQEP*VLPAAR Trigger: CCTGGCAGCAGGTAACACCCATGGCTCCTGCTGCCG...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAAGCTGGCTTGGCTTCTaGGCCAGCACAGGTCCCCAG | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLSWLGF*ASTGPQ Trigger: CTGGGGACCTGTGCTGGCCCAGAAGCCAAGCCAGCT...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACAGCAGTGCCAACAGCTaGCTTGGCTTCTGGGCCAGC | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDSSANS*LGFWAS Trigger: GCTGGCCCAGAAGCCAAGCCAGCTGTTGGCACTGCT...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAGCAGTGGCCACTTGCTaGAGAACAGGCCGGATCACC | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLAVATC*RTGRIT Trigger: GGTGATCCGGCCTGTTCTTCAGCAAGTGGCCACTGC...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGAACCTCCAACCAGAATaGGACATATCTGTTTCTCTG | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGNLQPE*DISVSL Trigger: CAGAGAAACAGATATGTCTCATTCTGGTTGGAGGTT...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACTGGTGCACAACAGAGTaGGCAGATGTGGTTAACGCC | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDWCTTE*ADVVNA Trigger: GGCGTTAACCACATCTGCTCACTCTGTTGTGCACCA...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTTGCACAGCTGGGGCCTaGGTTACAAGCGGAACTGTA | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNICTAGA*VTSGTV Trigger: TACAGTTCCGCTTGTAACTCAGGCCCCAGCTGTGCA...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTACGGGTGCAGCACTACTaGGGGAGGCTGATGATGGGT | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLRVQHY*GRLMMG Trigger: ACCCATCATCAGCCTCCCTCAGTAGTGCTGCACCCG...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTCCGCCTGCAGAGGTATaGCATGGTGCACAACAGAGT | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNIPPAEV*HGAQQS Trigger: ACTCTGTTGTGCACCATGGCATACCTCTGCAGGCGG...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACACAGGCGGGGGTTTATaGCCACTGGGACTTGGTGAA | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHTGGGL*PLGLGE Trigger: TTCACCAAGTCCCAGTGGGCATAAACCCCCGCCTGT...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAAGAAAACACAACCGCTTaGCTCTACTTTGAGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSEENTTA*LYFEFL Trigger: AAGAAACTCAAAGTAGAGCCAAGCGGTTGTGTTTTC...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGTTATGGAATAACTGGTaGGTTTACCATGTGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGLWNNW*VYHVLQ Trigger: CTGCAGCACATGGTAAACCCACCAGTTATTCCATAA...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAGAATTACTCCTGTTCTaGCACAACTTATTTTTCTTG | + |
Preference number: 4 (lower is better) Translates to: VLNTARSAQARRAHIMSRELLLF*HNLFFL Trigger: CAAGAAAAATAAGTTGTGCCAGAACAGGAGTAATTC...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACTCAGGGGCAGGGGACTaGATTTATTCTGTTTCAGGA | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNSGAGD*IYSVSG Trigger: TCCTGAAACAGAATAAATTCAGTCCCCTGCCCCTGA...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTTCCGGCCTCTCCTTCTaGGGTATGATTGTCCTGTGT | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNISGLSF*GMIVLC Trigger: ACACAGGACAATCATACCTCAGAAGGAGAGGCCGGA...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAATGGAAGGATGAGAATTaGCAAAGTTTCTACCATTCA | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSEWKDEN*QSFYHS Trigger: TGAATGGTAGAAACTTTGGCAATTCTCATCCTTCCA...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACCCAACTCCTCACTCTTaGGCTTTAACCCGCATCGCT | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHPTPHS*ALTRIA Trigger: AGCGATGCGGGTTAAAGCGCAAGAGTGAGGAGTTGG...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCGGACTTGGTGAACTATaGCACTGGGATGGGAGATAT | + |
Preference number: 4 (lower is better) Translates to: HHESMSTCISSHYLLKSCGLGEL*HWDGRY Trigger: ATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCC...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAAACATTGCAGGAAGTATaGACAGTTCATCAACAATCT | + |
Preference number: 4 (lower is better) Translates to: ATFLPVVTQSIRVLGVSETLQEV*TVHQQS Trigger: AGATTGTTGATGAACTGTCCATACTTCCTGCAATGT...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACTTTCCATTCCATTCTTaGTGCCCAGTTCCGAAATGC | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNFPFHS*CPVPKC Trigger: GCATTTCGGAACTGGGCATCAAGAATGGAATGGAAA...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACGCAAATGGACTGTCGTaGCCCGAGGAGTCTGATGTT | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDANGLS*PEESDV Trigger: AACATCAGACTCCTCGGGGCACGACAGTCCATTTGC...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCGCTTGCTGTCTTCGATaGCCAAAGTTTCCATTCCAT | + |
Preference number: 4 (lower is better) Translates to: HHESMSTCISSHYLLKSCACCLR*PKFPFH Trigger: ATGGAATGGAAACTTTGGGCATCGAAGACAGCAAGC...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACCTGGGTTTCCCATGTTaGTTTGCAACATTGCAGGAA | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNLGFPC*FATLQE Trigger: TTCCTGCAATGTTGCAAACCAACATGGGAAACCCAG...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACGGTGAACTATGCCACTaGGATGGGAGATATTGTAAG | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNGELCH*DGRYCK Trigger: CTTACAATATCTCCCATCCCAGTGGCATAGTTCACC...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACATCAGGACTGCTGAGTaGACACATCCGATCAATATT | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNIRTAE*THPINI Trigger: AATATTGATCGGATGTGTTCACTCAGCAGTCCTGAT...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR TCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACTGCTATCAGGACTGCTaGGTGAACACATCCGATCAA | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHCYQDC*VNTSDQ Trigger: TTGATCGGATGTGTTCACTCAGCAGTCCTGATAGCA...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR TCA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAATGGTTAGGACTTCCATaGGAAAGCGTGAATGGATTA | + |
Preference number: 4 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKWLGLP*ESVNGL Trigger: TAATCCATTCACGCTTTCTCATGGAAGTCCTAACCA...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGGGAAAATCTAGTAGATaGTTCATATTAACGAATGGG | + |
Preference number: 4 (lower is better) Translates to: VKATSFKHHHHHHQGERGGKSSR*FILTNG Trigger: CCCATTCGTTAATATGAAGCATCTACTAGATTTTCC...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 42% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR GCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACGGGTTTACCATGTGCTaGAGGAATACCTTGGATAGC | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHGFTMC*RNTLDS Trigger: GCTATCCAAGGTATTCCTGCAGCACATGGTAAACCC...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR GCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACGCAATGATGATGGTTTaGCGCTGTTTGTCTGAGACT | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDAMMMV*RCLSET Trigger: AGTCTCAGACAAACAGCGGCAAACCATCATCATTGC...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR GCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACGTTCATCATCTGACATaGTGTTCGGTCTCTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDVHHLT*CSVSCK Trigger: CTTGCAAGAGACCGAACAGCATGTCAGATGATGAAC...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR CCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAGTACTTCCAGCCAGATaGGCATGTACTGCTGTGTGG | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLVLPAR*ACTAVW Trigger: CCACACAGCAGTACATGCCCATCTGGCTGGAAGTAC...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR TCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACCCTTTCGTGGAAGGATaGGAATTGCCAAAGTTTCTA | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDPFVEG*ELPKFL Trigger: TAGAAACTTTGGCAATTCTCATCCTTCCACGAAAGG...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR TCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTACAGTCTTTGATACATaGCTGGCCGATCCAAAGTCT | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNITVFDT*LADPKS Trigger: AGACTTTGGATCGGCCAGTCATGTATCAAAGACTGT...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR TCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACGAGGGGCTGATAATGTaGTCTGGTTGGTTAGAAGAG | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDEGLIM*SGWLEE Trigger: CTCTTCTAACCAACCAGATCACATTATCAGCCCCTC...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR GCA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAATTTCCCATGTTGGTTTaGAACATTGCAGGAAGTATG | + |
Preference number: 4 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKFPMLV*NIAGSM Trigger: CATACTTCCTGCAATGTTGCAAACCAACATGGGAAA...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR GCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTCTCTGTACTCAGCCTTaGCAAGATGCTCACTTCTAT | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNILCTQP*QDAHFY Trigger: ATAGAAGTGAGCATCTTGGCAAGGCTGAGTACAGAG...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR GCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACGGTGGGTTTACCATGTaGTGCAGGAATACCTTGGAT | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDGGFTM*CRNTLD Trigger: ATCCAAGGTATTCCTGCAGCACATGGTAAACCCACC...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACGGGATATTGGTGTTCTaGAATGAATTACTCCTGTTC | + |
Preference number: 4 (lower is better) Translates to: PSLGNVLPMQKTHANVKNGILVF*NELLLF Trigger: GAACAGGAGTAATTCATTGCAGAACACCAATATCCC...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
||
CDS-3UTR CCA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAAATGGTATCTTTGTCTaGAAAGCACTACCTTTCGTG | + |
Preference number: 4 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKNGIFV*KALPFV Trigger: CACGAAAGGTAGTGCTTTCCAGACAAAGATACCATT...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAGCTGCAGGAATACCTTaGATAGCTGGGGGACAGATA | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLAAGIP*IAGGQI Trigger: TATCTGTCCCCCAGCTATCCAAGGTATTCCTGCAGC...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAACAATGGCACCTGCCTaGAATGAAAAGCTGTGTCCT | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLTMAPA*NEKLCP Trigger: AGGACACAGCTTTTCATTGCAGGCAGGTGCCATTGT...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACACTAGTAGGAATATATaGTTGCTGTCTTCGATGCCC | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHTSRNI*LLSSMP Trigger: GGGCATCGAAGACAGCAAGCATATATTCCTACTAGT...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACCCCTTATGGAATAACTaGTGGGTTTACCATGTGCTG | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDPLWNN*WVYHVL Trigger: CAGCACATGGTAAACCCACCAGTTATTCCATAAGGG...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCATGAGAAAGCGTGAATaGATTACTGGTAACACTAGT | + |
Preference number: 4 (lower is better) Translates to: HHESMSTCISSHYLLKSCMRKRE*ITGNTS Trigger: ACTAGTGTTACCAGTAATCCATTCACGCTTTCTCAT...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACATGTGGAGGGAAGATTaGTTTGTACTGAGTCTGATG | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHMWRED*FVLSLM Trigger: CATCAGACTCAGTACAAACCAATCTTCCCTCCACAT...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACCTGGCTGAGTTTTGTTaGACTCAATGGAAATCCAGT | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHLAEFC*TQWKSS Trigger: ACTGGATTTCCATTGAGTCCAACAAAACTCAGCCAG...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTTATATGGATACTGGCTaGGTTTTGTTGGACTCAATG | + |
Preference number: 4 (lower is better) Translates to: LHFLSLSTQVMPTAPLNIYMDTG*VLLDSM Trigger: CATTGAGTCCAACAAAACTCAGCCAGTATCCATATA...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACGTTGGTTTGCAACATTaGAGGAAGTATGGACAGTTC | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDVGLQH*RKYGQF Trigger: GAACTGTCCATACTTCCTGCAATGTTGCAAACCAAC...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACGTAGGAATATATGCTTaGTGTCTTCGATGCCCAAAG | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDVGIYA*CLRCPK Trigger: CTTTGGGCATCGAAGACAGCAAGCATATATTCCTAC...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAACAACATAATATTCTCTaGTTTGAGGTCAGCATGAAT | + |
Preference number: 4 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKQHNIL*FEVSMN Trigger: ATTCATGCTGACCTCAAACCAGAGAATATTATGTTG...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACTATTGTCTACCCTTATaGAATAACTGGTGGGTTTAC | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDYCLPL*NNWWVY Trigger: GTAAACCCACCAGTTATTCCATAAGGGTAGACAATA...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAGCTGATAATGTGATCTaGTTGGTTAGAAGAGGCGGT | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLADNVI*LVRRGG Trigger: ACCGCCTCTTCTAACCAACCAGATCACATTATCAGC...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR TCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACCGTGCATACGAAGGGTaGTTCTTCAAAATTTTAATG | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHRAYEG*FFKILM Trigger: CATTAAAATTTTGAAGAATCACCCTTCGTATGCACG...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTAAAGCACTACCTTTCGTaGAAGGATGAGAATTGCCAA | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLKHYLS*KDENCQ Trigger: TTGGCAATTCTCATCCTTCCACGAAAGGTAGTGCTT...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACTCTTTGATACATGACTaGCCGATCCAAAGTCTATCA | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDSLIHD*PIQSLS Trigger: TGATAGACTTTGGATCGGCCAGTCATGTATCAAAGA...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACATATTCAAAGTGCTTTaGCAAGCTTCACAATCTAGA | + |
Preference number: 4 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDIFKVL*QASQSR Trigger: TCTAGATTGTGAAGCTTGCCAAAGCACTTTGAATAT...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACTGCAATGTAAGAATGTaGAGGGAAGATTGGTTTGTA | + |
Preference number: 4 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHCNVRM*REDWFV Trigger: TACAAACCAATCTTCCCTCCACATTCTTACATTGCA...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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3UTR CAA 72 bp | ACATCCATAAAAGTTTCCCCAGTCCTTATTGTAATATaGCACAGTGCAATTGCTACATGGCAAACTAGTGTA | + |
Preference number: 4 (lower is better) Translates to: TSIKVSPVLIVI*HSAIATWQTSV Trigger: TACACTAGTTTGCCATGTAGCAATTGCACTGTGCAATATTACAATAAGGACTGGGGAAACTTTTATGGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR GCA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACGATCAATATTCAAAGTaGTTTGGCAAGCTTCACAAT | + |
Preference number: 4 (lower is better) Translates to: FAPISHLSIELLHKKIHDDQYSK*FGKLHN Trigger: ATTGTGAAGCTTGCCAAAGCACTTTGAATATTGATC...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CCA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTACTTCATATTAACGAATaGGTGGTTCAGAGTCTCAAT | + |
Preference number: 4 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLLHINE*VVQSLN Trigger: ATTGAGACTCTGAACCACCCATTCGTTAATATGAAG...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS GCA 90 bp | ATGCTGAACCTGGCTCAGGTTCAAATGCTGCTGAGGGAACGCTGCTaGGGGCTTCTGCTGACGAGCGCCCAGGGCAGGAGGCTGGTGCAG | + |
Preference number: 5 (lower is better) Translates to: MLNLAQVQMLLRERC*GLLLTSAQGRRLVQ Trigger: CTGCACCAGCCTCCTGCCCTGGGCGCTCGTCAGCAGAAGCCCGCAGCAGCGTTCCCTCAGCAGCATTTGAACCTGAGCCAGGTTCAGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | CCCCACCGGTGGCTCCACAGCAGTGCCAACAGCTGGCTTGGCTTCTaGGCCAGCACAGGTCCCCAGCTCTGTGTTCTGATGAGCATCCTC | + |
Preference number: 5 (lower is better) Translates to: PHRWLHSSANSWLGF*ASTGPQLCVLMSIL Trigger: GAGGATGCTCATCAGAACACAGAGCTGGGGACCTGTGCTGGCCCAGAAGCCAAGCCAGCTGTTGGCACTGCTGTGGAGCCACCGGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | GAAATGCTGAACCTGGCTCAGGTTCAAATGCTGCTGAGGGAACGCTaGTGCGGGCTTCTGCTGACGAGCGCCCAGGGCAGGAGGCTGGTG | + |
Preference number: 5 (lower is better) Translates to: EMLNLAQVQMLLRER*CGLLLTSAQGRRLV Trigger: CACCAGCCTCCTGCCCTGGGCGCTCGTCAGCAGAAGCCCGCAGCAGCGTTCCCTCAGCAGCATTTGAACCTGAGCCAGGTTCAGCATTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | GGATGCTGTAACATAGGTCTTGAGGTACACGGAGAGGCTAGGAGGTaGGCCACGGGTGCAGCACTACTGAGGGAGGCTGATGATGGGTAT | + |
Preference number: 5 (lower is better) Translates to: GCCNIGLEVHGEARR*ATGAALLREADDGY Trigger: ATACCCATCATCAGCCTCCCTCAGTAGTGCTGCACCCGTGGCCCACCTCCTAGCCTCTCCGTGTACCTCAAGACCTATGTTACAGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | AAGCATCTCCACAACCGAACTGTGCAGTCCCCGCCTGCAGAGGTATaGCATGGTGCACAACAGAGTGAGCAGATGTGGTTAACGCCTGAC | + |
Preference number: 5 (lower is better) Translates to: KHLHNRTVQSPPAEV*HGAQQSEQMWLTPD Trigger: GTCAGGCGTTAACCACATCTGCTCACTCTGTTGTGCACCATGGCATACCTCTGCAGGCGGGGACTGCACAGTTCGGTTGTGGAGATGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | GCAGGAGCCATGGGTGTTACCTGCTGCCAGGCAGGTATTAGCATCTaGTGTGTTCGACCAGACCATGTCTGCTGTGAAAGGACTCCAGGT | + |
Preference number: 5 (lower is better) Translates to: AGAMGVTCCQAGISI*CVRPDHVCCERTPG Trigger: ACCTGGAGTCCTTTCACAGCAGACATGGTCTGGTCGAACACAGCAGATGCTAATACCTGCCTGGCAGCAGGTAACACCCATGGCTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | GGCAGGCTGGCCTTTTCTCAATGGCTGGCATGTAGAATCCGTGTTTaGCATGTGCTCGTCAACACTCAGTCCACTTTCTCTCCCCACCGG | + |
Preference number: 5 (lower is better) Translates to: GRLAFSQWLACRIRV*HVLVNTQSTFSPHR Trigger: CCGGTGGGGAGAGAAAGTGGACTGAGTGTTGACGAGCACATGGCAAACACGGATTCTACATGCCAGCCATTGAGAAAAGGCCAGCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGAGCACCGGCAGTGTCTTaGACAACAATGGCACCTGCC | + |
Preference number: 5 (lower is better) Translates to: VLNTARSAQARRAHIMSRAPAVS*TTMAPA Trigger: GGCAGGTGCCATTGTTGTCAAAGACACTGCCGGTGC...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS GCA 90 bp | TCAGAAGTTAGTGTTGCGGCAGCAGGAGCCATGGGTGTTACCTGCTaGCAGGCAGGTATTAGCATCTGCTGTGTTCGACCAGACCATGTC | + |
Preference number: 5 (lower is better) Translates to: SEVSVAAAGAMGVTC*QAGISICCVRPDHV Trigger: GACATGGTCTGGTCGAACACAGCAGATGCTAATACCTGCCTGGCAGCAGGTAACACCCATGGCTCCTGCTGCCGCAACACTAACTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | TGGCCTTTTCTCAATGGCTGGCATGTAGAATCCGTGTTTGCCATGTaGTCGTCAACACTCAGTCCACTTTCTCTCCCCACCGGTGGCTCC | + |
Preference number: 5 (lower is better) Translates to: WPFLNGWHVESVFAM*SSTLSPLSLPTGGS Trigger: GGAGCCACCGGTGGGGAGAGAAAGTGGACTGAGTGTTGACGAGCACATGGCAAACACGGATTCTACATGCCAGCCATTGAGAAAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | ACTGATAGTCGCCTTCCCCGCTGGTGCAGTTCTGCTTCGATCCTGTaGTCGCTGTCACAACTGTCACTGGGTTTCCCATGTTGGTTTGCA | + |
Preference number: 5 (lower is better) Translates to: TDSRLPRWCSSASIL*SLSQLSLGFPCWFA Trigger: TGCAAACCAACATGGGAAACCCAGTGACAGTTGTGACAGCGACCACAGGATCGAAGCAGAACTGCACCAGCGGGGAAGGCGACTATCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | AACCAGCCATGCCTTCAGAAGTTAGTGTTGCGGCAGCAGGAGCCATaGGTGTTACCTGCTGCCAGGCAGGTATTAGCATCTGCTGTGTTC | + |
Preference number: 5 (lower is better) Translates to: NQPCLQKLVLRQQEP*VLPAARQVLASAVF Trigger: GAACACAGCAGATGCTAATACCTGCCTGGCAGCAGGTAACACCCATGGCTCCTGCTGCCGCAACACTAACTTCTGAAGGCATGGCTGGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | GTGTTAAATACTGCACGGTCTGCCCAAGCAAGGAGGGCGCACATCATGAGTCGATATGCCCACTGGGACTaGGTGAACTATGCCACTGGG | + |
Preference number: 5 (lower is better) Translates to: VLNTARSAQARRAHIMSRYAHWD*VNYATG Trigger: CCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCATA...TCGACTCATGATGTGCGCCCTCCTTGCTTGGGCAGACCGTGCAGTATTTAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS TCA 90 bp | GCAGGAAGTATGGACAGTTCATCAACAATCTGCATCGCGCCGCTGTaGTTCTCCAACTCCTCACTCTTGCGCTTTAACCCGCATCGCTGG | + |
Preference number: 5 (lower is better) Translates to: AGSMDSSSTICIAPL*FSNSSLLRFNPHRW Trigger: CCAGCGATGCGGGTTAAAGCGCAAGAGTGAGGAGTTGGAGAATCACAGCGGCGCGATGCAGATTGTTGATGAACTGTCCATACTTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | GTGGAATCATTTTCCCCCAGTCTCCAAGCCTCTGAGAACCAGCCATaGCTTCAGAAGTTAGTGTTGCGGCAGCAGGAGCCATGGGTGTTA | + |
Preference number: 5 (lower is better) Translates to: VESFSPSLQASENQP*LQKLVLRQQEPWVL Trigger: TAACACCCATGGCTCCTGCTGCCGCAACACTAACTTCTGAAGGCATGGCTGGTTCTCAGAGGCTTGGAGACTGGGGGAAAATGATTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | ATCACACTCACGGCAGGACTCGGGGAGTCGGCAATGATGATGGTTTaGCGCTGTTTGTCTGAGACTGAAGAATCCTGTCTGACAGACGCT | + |
Preference number: 5 (lower is better) Translates to: ITLTAGLGESAMMMV*RCLSETEESCLTDA Trigger: AGCGTCTGTCAGACAGGATTCTTCAGTCTCAGACAAACAGCGGCAAACCATCATCATTGCCGACTCCCCGAGTCCTGCCGTGAGTGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 90 bp | CACAAAACTGTTCTCTGCAAATGGACTGTCGTGCCCCGAGGAGTCTaGTGTTGGAGAGCCATCCACAGTCTCACACCCGCTTTCTTGTTC | + |
Preference number: 5 (lower is better) Translates to: HKTVLCKWTVVPRGV*CWRAIHSLTPAFLF Trigger: GAACAAGAAAGCGGGTGTGAGACTGTGGATGGCTCTCCAACATCAGACTCCTCGGGGCACGACAGTCCATTTGCAGAGAACAGTTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | ACAGATAATCAGGGTCTGATGAAAAGCATCTCCACAACCGAACTGTaGAGTCCCCGCCTGCAGAGGTATGCCATGGTGCACAACAGAGTG | + |
Preference number: 5 (lower is better) Translates to: TDNQGLMKSISTTEL*SPRLQRYAMVHNRV Trigger: CACTCTGTTGTGCACCATGGCATACCTCTGCAGGCGGGGACTGCACAGTTCGGTTGTGGAGATGCTTTTCATCAGACCCTGATTATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | ACTGAGTCTGATGAATGGTTGGGGATGGTAACAGGCGGGGGTTTATaGCCACTGGGACTTGGTGAACTATGCCACTGGGATGGGAGATAT | + |
Preference number: 5 (lower is better) Translates to: TESDEWLGMVTGGGL*PLGLGELCHWDGRY Trigger: ATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCATAAACCCCCGCCTGTTACCATCCCCAACCATTCATCAGACTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | AGGCTGTCCTCCGAGGTGTGTACTTCCAGCCAGATGGGCATGTACTaGTGTGTGGTTAGGACTTCCATGAGAAAGCGTGAATGGATTACT | + |
Preference number: 5 (lower is better) Translates to: RLSSEVCTSSQMGMY*CVVRTSMRKREWIT Trigger: AGTAATCCATTCACGCTTTCTCATGGAAGTCCTAACCACACAGCAGTACATGCCCATCTGGCTGGAAGTACACACCTCGGAGGACAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | GGTGCAGTTCTGCTTCGATCCTGTGGTCGCTGTCACAACTGTCACTaGGTTTCCCATGTTGGTTTGCAACATTGCAGGAAGTATGGACAG | + |
Preference number: 5 (lower is better) Translates to: GAVLLRSCGRCHNCH*VSHVGLQHCRKYGQ Trigger: CTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAACCCAGTGACAGTTGTGACAGCGACCACAGGATCGAAGCAGAACTGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | GTAAAAGCAACTTCATTTAAACATCACCACCATCACCACCAAGGGGAGAGGGGGGAGTCTGATGAATGGTaGGGGATGGTAACAGGCGGG | + |
Preference number: 5 (lower is better) Translates to: VKATSFKHHHHHHQGERGESDEW*GMVTGG Trigger: CCCGCCTGTTACCATCCCCAACCATTCATCAGACTC...CCCCCTCTCCCCTTGGTGGTGATGGTGGTGATGTTTAAATGAAGTTGCTTTTAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS TCA 90 bp | ATCCTGTCTGACAGACGCTTCACGGCAAGTTCCGGCCTCTCCTTCTaGGGTATGATTGTCCTGTGTGTCTACACAACTTACTTCCTCAAC | + |
Preference number: 5 (lower is better) Translates to: ILSDRRFTASSGLSF*GMIVLCVYTTYFLN Trigger: GTTGAGGAAGTAAGTTGTGTAGACACACAGGACAATCATACCTCAGAAGGAGAGGCCGGAACTTGCCGTGAAGCGTCTGTCAGACAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 90 bp | CGCTGTCACAACTGTCACTGGGTTTCCCATGTTGGTTTGCAACATTaGAGGAAGTATGGACAGTTCATCAACAATCTGCATCGCGCCGCT | + |
Preference number: 5 (lower is better) Translates to: RCHNCHWVSHVGLQH*RKYGQFINNLHRAA Trigger: AGCGGCGCGATGCAGATTGTTGATGAACTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAACCCAGTGACAGTTGTGACAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACGTGCCAACAGCTGGCTaGGCTTCTGGGCCAGCACAG | + |
Preference number: 5 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDVPTAG*ASGPAQ Trigger: CTGTGCTGGCCCAGAAGCCAAGCCAGCTGTTGGCAC...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS CCA 90 bp | CTGTCACTGGGTTTCCCATGTTGGTTTGCAACATTGCAGGAAGTATaGACAGTTCATCAACAATCTGCATCGCGCCGCTGTGATTCTCCA | + |
Preference number: 5 (lower is better) Translates to: LSLGFPCWFATLQEV*TVHQQSASRRCDSP Trigger: TGGAGAATCACAGCGGCGCGATGCAGATTGTTGATGAACTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAACCCAGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | GGTCAGCATGAATTAAACCAAGACTTTTTAATTTCTTCAGTGCAGTaGCCACTTGCTGAAGAACAGGCCGGATCACCTTCAGGGGCAGGG | + |
Preference number: 5 (lower is better) Translates to: GQHELNQDFLISSVQ*PLAEEQAGSPSGAG Trigger: CCCTGCCCCTGAAGGTGATCCGGCCTGTTCTTCAGCAAGTGGCCACTGCACTGAAGAAATTAAAAAGTCTTGGTTTAATTCATGCTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | CAGCTGGGGCCTGAGTTACAAGCGGAACTGTATTGTCTACCCTTATaGAATAACTGGTGGGTTTACCATGTGCTGCAGGAATACCTTGGA | + |
Preference number: 5 (lower is better) Translates to: QLGPELQAELYCLPL*NNWWVYHVLQEYLG Trigger: TCCAAGGTATTCCTGCAGCACATGGTAAACCCACCAGTTATTCCATAAGGGTAGACAATACAGTTCCGCTTGTAACTCAGGCCCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 90 bp | TGTAAGAATGTGGAGGGAAGATTGGTTTGTACTGAGTCTGATGAATaGTTGGGGATGGTAACAGGCGGGGGTTTATGCCCACTGGGACTT | + |
Preference number: 5 (lower is better) Translates to: CKNVEGRLVCTESDE*LGMVTGGGLCPLGL Trigger: AAGTCCCAGTGGGCATAAACCCCCGCCTGTTACCATCCCCAACCATTCATCAGACTCAGTACAAACCAATCTTCCCTCCACATTCTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAACAGTGCAGTGGCCACTaGCTGAAGAACAGGCCGGAT | + |
Preference number: 5 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKQCSGH*LKNRPD Trigger: ATCCGGCCTGTTCTTCAGCAAGTGGCCACTGCACTG...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CAA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAACCGAGGAGTCTGATGTaGGAGAGCCATCCACAGTCT | + |
Preference number: 5 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKPRSLM*ESHPQS Trigger: AGACTGTGGATGGCTCTCCAACATCAGACTCCTCGG...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS GCA 90 bp | CAAAGTTATACTCATCAGCGTTCTCTGTACTCAGCCTTGCCAAGATaGTCACTTCTATCTGCCCTTGACGTGCATACGAAGGGTGATTCT | + |
Preference number: 5 (lower is better) Translates to: QSYTHQRSLYSALPR*SLLSALDVHTKGDS Trigger: AGAATCACCCTTCGTATGCACGTCAAGGGCAGATAGAAGTGAGCATCTTGGCAAGGCTGAGTACAGAGAACGCTGATGAGTATAACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | ATTACAACAACATTAAGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACTCCAACTCCTCACTCTaGCGCTTTAACCCGCATCGC | + |
Preference number: 5 (lower is better) Translates to: ITTTLRAKSRQRFAHAKDSNSSL*RFNPHR Trigger: GCGATGCGGGTTAAAGCGCAAGAGTGAGGAGTTGGA...GTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCTTAATGTTGTTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS TCA 90 bp | CTGGCTGAGTTTTGTTGGACTCAATGGAAATCCAGTATACGCAGGTaGTGCTGCAATGTAAGAATGTGGAGGGAAGATTGGTTTGTACTG | + |
Preference number: 5 (lower is better) Translates to: LAEFCWTQWKSSIRR*CCNVRMWREDWFVL Trigger: CAGTACAAACCAATCTTCCCTCCACATTCTTACATTGCAGCATCACCTGCGTATACTGGATTTCCATTGAGTCCAACAAAACTCAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | GCCACTTTCCTCCCTGTCGTGACACAATCAATCCGTGTACTTGGTGTCTCTGAAGAGATTGAAGATACGTaGAGCAAACAGTCTTTGATA | + |
Preference number: 5 (lower is better) Translates to: ATFLPVVTQSIRVLGVSEEIEDT*SKQSLI Trigger: TATCAAAGACTGTTTGCTCAACGTATCTTCAATCTC...TTCAGAGACACCAAGTACACGGATTGATTGTGTCACGACAGGGAGGAAAGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS CCA 90 bp | TCAGGACTGCTGAGTGAACACATCCGATCAATATTCAAAGTGCTTTaGCAAGCTTCACAATCTAGACTACCTTTACACTCTCGGAGTGAA | + |
Preference number: 5 (lower is better) Translates to: SGLLSEHIRSIFKVL*QASQSRLPLHSRSE Trigger: TTCACTCCGAGAGTGTAAAGGTAGTCTAGATTGTGAAGCTTGCCAAAGCACTTTGAATATTGATCGGATGTGTTCACTCAGCAGTCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACCCTCTCTTCCAGCATTaGACAACCTGGCCAAAAGTG | + |
Preference number: 5 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHPLFQH*TTWPKV Trigger: CACTTTTGGCCAGGTTGTCAAATGCTGGAAGAGAGG...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CAA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTATGCTGCAGGAATACCTaGGATAGCTGGGGGACAGAT | + |
Preference number: 5 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLCCRNT*DSWGTD Trigger: ATCTGTCCCCCAGCTATCCAAGGTATTCCTGCAGCA...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CAA 90 bp | CCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAAGAACAGTAGGAATATATGCTaGCTGTCTTCGATGCCCAAA | + |
Preference number: 5 (lower is better) Translates to: PSLGNVLPMQKTHANVKNSRNIC*LSSMPK Trigger: TTTGGGCATCGAAGACAGCAAGCATATATTCCTACT...GTTCTTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS GCA 90 bp | GTATCTTTGTCTGGAAAGCACTACCTTTCGTGGAAGGATGAGAATTaGCAAAGTTTCTACCATTCACATGGATCTGAGGATAGGTTCTTT | + |
Preference number: 5 (lower is better) Translates to: VSLSGKHYLSWKDEN*QSFYHSHGSEDRFF Trigger: AAAGAACCTATCCTCAGATCCATGTGAATGGTAGAAACTTTGGCAATTCTCATCCTTCCACGAAAGGTAGTGCTTTCCAGACAAAGATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | TTGCATTTCCTCTCATTATCTACTCAAGTCATGCCTACTGCACCTCTAAACATTTTGAGCAAACAGTCTTaGATACATGACTGGCCGATC | + |
Preference number: 5 (lower is better) Translates to: LHFLSLSTQVMPTAPLNILSKQS*IHDWPI Trigger: GATCGGCCAGTCATGTATCAAAGACTGTTTGCTCAA...AATGTTTAGAGGTGCAGTAGGCATGACTTGAGTAGATAATGAGAGGAAATGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CAA 90 bp | CATCATGAGTCGATGAGCACTTGCATTTCCTCTCATTATCTACTCAAGTCATGCGCTGAATGTGGGATATaGGTGTTCTGCAATGAATTA | + |
Preference number: 5 (lower is better) Translates to: HHESMSTCISSHYLLKSCAECGI*VFCNEL Trigger: TAATTCATTGCAGAACACCAATATCCCACATTCAGC...GCATGACTTGAGTAGATAATGAGAGGAAATGCAAGTGCTCATCGACTCATGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CAA 90 bp | TTTGCTCCCATAAGTCACCTGTCTATAGAGTTACTACATAAGAAGATACATGACATGGTTTGCCGCTGTTaGTCTGAGACTGAAGAATCC | + |
Preference number: 5 (lower is better) Translates to: FAPISHLSIELLHKKIHDMVCRC*SETEES Trigger: GGATTCTTCAGTCTCAGACAAACAGCGGCAAACCAT...GTCATGTATCTTCTTATGTAGTAACTCTATAGACAGGTGACTTATGGGAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS GCA 90 bp | ATGAGAAAGCGTGAATGGATTACTGGTAACACTAGTAGGAATATATaGTTGCTGTCTTCGATGCCCAAAGTTTCCATTCCATTCTTGATG | + |
Preference number: 5 (lower is better) Translates to: MRKREWITGNTSRNI*LLSSMPKVSIPFLM Trigger: CATCAAGAATGGAATGGAAACTTTGGGCATCGAAGACAGCAAGCATATATTCCTACTAGTGTTACCAGTAATCCATTCACGCTTTCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | AGAGCCAAGTCTAGGCAACGTTTTGCCCATGCAAAAGACACATGCAAATGTAAACACTACAAAAGGCACTaGACTGAGTTTGATAAACAT | + |
Preference number: 5 (lower is better) Translates to: RAKSRQRFAHAKDTCKCKHYKRH*TEFDKH Trigger: ATGTTTATCAAACTCAGTCAAGTGCCTTTTGTAGTG...TTTACATTTGCATGTGTCTTTTGCATGGGCAAAACGTTGCCTAGACTTGGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS-3UTR CAA 90 bp | CACAACCTGCTTAGTAAGGAAATGTGTCAATCCAAAACATTTGGAGGTTTACACATATCGTCCAGACTGTaGAATATGTACTTTCTGGCC | + |
Preference number: 5 (lower is better) Translates to: HNLLSKEMCQSKTFGGLHISSRL*NMYFLA Trigger: GGCCAGAAAGTACATATTCAACAGTCTGGACGATAT...GTGTAAACCTCCAAATGTTTTGGATTGACACATTTCCTTACTAAGCAGGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS TCA 90 bp | TGTGGTTATTTGTTTCACATGAACTCGGAGACTTACAAATATCCATaGTATGAAAACAGGACTTTACATGGTTGCTGTGAGGAAAATCTA | + |
Preference number: 5 (lower is better) Translates to: CGYLFHMNSETYKYP*YENRTLHGCCEENL Trigger: TAGATTTTCCTCACAGCAACCATGTAAAGTCCTGTTTTCATATCATGGATATTTGTAAGTCTCCGAGTTCATGTGAAACAAATAACCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS-3UTR CAA 90 bp | TTCCTACACCTTGCAGTGTATGATTTAACTTTTACAGAACACAAGCCAAGTTTATTTTACTGTGGTTATTaGTTTCACATGAACTCGGAG | + |
Preference number: 5 (lower is better) Translates to: FLHLAVYDLTFTEHKPSLFYCGY*FHMNSE Trigger: CTCCGAGTTCATGTGAAACAAATAACCACAGTAAAA...TAAACTTGGCTTGTGTTCTGTAAAAGTTAAATCATACACTGCAAGGTGTAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028600.14 |
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CDS CCA 72 bp | TCTCCCCACCGGTGGCTCCACAGCAGTGCCAACAGCTaGCTTGGCTTCTGGGCCAGCACAGGTCCCCAGCTC | + |
Preference number: 6 (lower is better) Translates to: SPHRWLHSSANS*LGFWASTGPQL Trigger: GAGCTGGGGACCTGTGCTGGCCCAGAAGCCAAGCCAGCTGTTGGCACTGCTGTGGAGCCACCGGTGGGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | CTGGCTCAGGTTCAAATGCTGCTGAGGGAACGCTGCTaGGGGCTTCTGCTGACGAGCGCCCAGGGCAGGAGG | + |
Preference number: 6 (lower is better) Translates to: LAQVQMLLRERC*GLLLTSAQGRR Trigger: CCTCCTGCCCTGGGCGCTCGTCAGCAGAAGCCCGCAGCAGCGTTCCCTCAGCAGCATTTGAACCTGAGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | AACCTGGCTCAGGTTCAAATGCTGCTGAGGGAACGCTaGTGCGGGCTTCTGCTGACGAGCGCCCAGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: NLAQVQMLLRER*CGLLLTSAQGR Trigger: CCTGCCCTGGGCGCTCGTCAGCAGAAGCCCGCAGCAGCGTTCCCTCAGCAGCATTTGAACCTGAGCCAGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | GTTCGGTCTCTTGCAAGGGGACGGGCTGGACTGCCCTaGGGAGCTGGTGCTCAGAGTGCTATCAGGACTGCT | + |
Preference number: 6 (lower is better) Translates to: VRSLARGRAGLP*GAGAQSAIRTA Trigger: AGCAGTCCTGATAGCACTCTGAGCACCAGCTCCTCAGGGCAGTCCAGCCCGTCCCCTTGCAAGAGACCGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | TGGCTCCACAGCAGTGCCAACAGCTGGCTTGGCTTCTaGGCCAGCACAGGTCCCCAGCTCTGTGTTCTGATG | + |
Preference number: 6 (lower is better) Translates to: WLHSSANSWLGF*ASTGPQLCVLM Trigger: CATCAGAACACAGAGCTGGGGACCTGTGCTGGCCCAGAAGCCAAGCCAGCTGTTGGCACTGCTGTGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | CGCCTTCCCCGCTGGTGCAGTTCTGCTTCGATCCTGTaGTCGCTGTCACAACTGTCACTGGGTTTCCCATGT | + |
Preference number: 6 (lower is better) Translates to: RLPRWCSSASIL*SLSQLSLGFPC Trigger: ACATGGGAAACCCAGTGACAGTTGTGACAGCGACCACAGGATCGAAGCAGAACTGCACCAGCGGGGAAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | AACATAGGTCTTGAGGTACACGGAGAGGCTAGGAGGTaGGCCACGGGTGCAGCACTACTGAGGGAGGCTGAT | + |
Preference number: 6 (lower is better) Translates to: NIGLEVHGEARR*ATGAALLREAD Trigger: ATCAGCCTCCCTCAGTAGTGCTGCACCCGTGGCCCACCTCCTAGCCTCTCCGTGTACCTCAAGACCTATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | GTTCTCTGCAAATGGACTGTCGTGCCCCGAGGAGTCTaGTGTTGGAGAGCCATCCACAGTCTCACACCCGCT | + |
Preference number: 6 (lower is better) Translates to: VLCKWTVVPRGV*CWRAIHSLTPA Trigger: AGCGGGTGTGAGACTGTGGATGGCTCTCCAACATCAGACTCCTCGGGGCACGACAGTCCATTTGCAGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | CAGGGTCTGATGAAAAGCATCTCCACAACCGAACTGTaGAGTCCCCGCCTGCAGAGGTATGCCATGGTGCAC | + |
Preference number: 6 (lower is better) Translates to: QGLMKSISTTEL*SPRLQRYAMVH Trigger: GTGCACCATGGCATACCTCTGCAGGCGGGGACTGCACAGTTCGGTTGTGGAGATGCTTTTCATCAGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | AGTGTTGCGGCAGCAGGAGCCATGGGTGTTACCTGCTaGCAGGCAGGTATTAGCATCTGCTGTGTTCGACCA | + |
Preference number: 6 (lower is better) Translates to: SVAAAGAMGVTC*QAGISICCVRP Trigger: TGGTCGAACACAGCAGATGCTAATACCTGCCTGGCAGCAGGTAACACCCATGGCTCCTGCTGCCGCAACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | TTTTCCCCCAGTCTCCAAGCCTCTGAGAACCAGCCATaGCTTCAGAAGTTAGTGTTGCGGCAGCAGGAGCCA | + |
Preference number: 6 (lower is better) Translates to: FSPSLQASENQP*LQKLVLRQQEP Trigger: TGGCTCCTGCTGCCGCAACACTAACTTCTGAAGGCATGGCTGGTTCTCAGAGGCTTGGAGACTGGGGGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | TTTCTTGTTCATCATCTGACATGCTGTTCGGTCTCTTaGAAGGGGACGGGCTGGACTGCCCTGAGGAGCTGG | + |
Preference number: 6 (lower is better) Translates to: FLVHHLTCCSVS*KGTGWTALRSW Trigger: CCAGCTCCTCAGGGCAGTCCAGCCCGTCCCCTTGCAAGAGACCGAACAGCATGTCAGATGATGAACAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | AAGGACTCCAGGTCGGATCTGCAGAGGCTGCACAGCTaGGGCCTGAGTTACAAGCGGAACTGTATTGTCTAC | + |
Preference number: 6 (lower is better) Translates to: KDSRSDLQRLHS*GLSYKRNCIVY Trigger: GTAGACAATACAGTTCCGCTTGTAACTCAGGCCCCAGCTGTGCAGCCTCTGCAGATCCGACCTGGAGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | AGCTTTCCGGGGGCAGGCTGGCCTTTTCTCAATGGCTaGCATGTAGAATCCGTGTTTGCCATGTGCTCGTCA | + |
Preference number: 6 (lower is better) Translates to: SFPGAGWPFLNG*HVESVFAMCSS Trigger: TGACGAGCACATGGCAAACACGGATTCTACATGCCAGCCATTGAGAAAAGGCCAGCCTGCCCCCGGAAAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | CTTTCTTGTTCATCATCTGACATGCTGTTCGGTCTCTaGCAAGGGGACGGGCTGGACTGCCCTGAGGAGCTG | + |
Preference number: 6 (lower is better) Translates to: LSCSSSDMLFGL*QGDGLDCPEEL Trigger: CAGCTCCTCAGGGCAGTCCAGCCCGTCCCCTTGCAAGAGACCGAACAGCATGTCAGATGATGAACAAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | CTGCAAATGGACTGTCGTGCCCCGAGGAGTCTGATGTaGGAGAGCCATCCACAGTCTCACACCCGCTTTCTT | + |
Preference number: 6 (lower is better) Translates to: LQMDCRAPRSLM*ESHPQSHTRFL Trigger: AAGAAAGCGGGTGTGAGACTGTGGATGGCTCTCCAACATCAGACTCCTCGGGGCACGACAGTCCATTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | ACGGCAGGACTCGGGGAGTCGGCAATGATGATGGTTTGCCGCTGTTaGTCTGAGACTGAAGAATCCTGTCTGACAGACGCTTCACGGCAA | + |
Preference number: 6 (lower is better) Translates to: TAGLGESAMMMVCRC*SETEESCLTDASRQ Trigger: TTGCCGTGAAGCGTCTGTCAGACAGGATTCTTCAGTCTCAGACAAACAGCGGCAAACCATCATCATTGCCGACTCCCCGAGTCCTGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | ACGGCAGGACTCGGGGAGTCGGCAATGATGATGGTTTaGCGCTGTTTGTCTGAGACTGAAGAATCCTGTCTG | + |
Preference number: 6 (lower is better) Translates to: TAGLGESAMMMV*RCLSETEESCL Trigger: CAGACAGGATTCTTCAGTCTCAGACAAACAGCGGCAAACCATCATCATTGCCGACTCCCCGAGTCCTGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | GATGAATGGTTGGGGATGGTAACAGGCGGGGGTTTATaGCCACTGGGACTTGGTGAACTATGCCACTGGGAT | + |
Preference number: 6 (lower is better) Translates to: DEWLGMVTGGGL*PLGLGELCHWD Trigger: ATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCATAAACCCCCGCCTGTTACCATCCCCAACCATTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | TGCCTTCAGAAGTTAGTGTTGCGGCAGCAGGAGCCATaGGTGTTACCTGCTGCCAGGCAGGTATTAGCATCT | + |
Preference number: 6 (lower is better) Translates to: CLQKLVLRQQEP*VLPAARQVLAS Trigger: AGATGCTAATACCTGCCTGGCAGCAGGTAACACCCATGGCTCCTGCTGCCGCAACACTAACTTCTGAAGGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | TTTGCCGCTGTTTGTCTGAGACTGAAGAATCCTGTCTaGCAGACGCTTCACGGCAAGTTCCGGCCTCTCCTT | + |
Preference number: 6 (lower is better) Translates to: FAAVCLRLKNPV*QTLHGKFRPLL Trigger: AAGGAGAGGCCGGAACTTGCCGTGAAGCGTCTGTCAGACAGGATTCTTCAGTCTCAGACAAACAGCGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | ATCCACAGTCTCACACCCGCTTTCTTGTTCATCATCTaGCATGCTGTTCGGTCTCTTGCAAGGGGACGGGCT | + |
Preference number: 6 (lower is better) Translates to: IHSLTPAFLFII*HAVRSLARGRA Trigger: AGCCCGTCCCCTTGCAAGAGACCGAACAGCATGTCAGATGATGAACAAGAAAGCGGGTGTGAGACTGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | ATGGGTGTTACCTGCTGCCAGGCAGGTATTAGCATCTaGTGTGTTCGACCAGACCATGTCTGCTGTGAAAGG | + |
Preference number: 6 (lower is better) Translates to: MGVTCCQAGISI*CVRPDHVCCER Trigger: CCTTTCACAGCAGACATGGTCTGGTCGAACACAGCAGATGCTAATACCTGCCTGGCAGCAGGTAACACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | GGCGGGGGTTTATGCCCACTGGGACTTGGTGAACTATaGCACTGGGATGGGAGATATTGTAAGTTGGATGCT | + |
Preference number: 6 (lower is better) Translates to: GGGLCPLGLGEL*HWDGRYCKLDA Trigger: AGCATCCAACTTACAATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCATAAACCCCCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | TCCAACTCCTCACTCTTGCGCTTTAACCCGCATCGCTaGGGCCCTTCTAGGAAATGTAACCTGTTTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: SNSSLLRFNPHR*GPSRKCNLFLH Trigger: GTGGAGAAACAGGTTACATTTCCTAGAAGGGCCCCAGCGATGCGGGTTAAAGCGCAAGAGTGAGGAGTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | CTCGGGGAGTCGGCAATGATGATGGTTTGCCGCTGTTaGTCTGAGACTGAAGAATCCTGTCTGACAGACGCT | + |
Preference number: 6 (lower is better) Translates to: LGESAMMMVCRC*SETEESCLTDA Trigger: AGCGTCTGTCAGACAGGATTCTTCAGTCTCAGACAAACAGCGGCAAACCATCATCATTGCCGACTCCCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | AACTGTTCTCTGCAAATGGACTGTCGTGCCCCGAGGAGTCTGATGTaGGAGAGCCATCCACAGTCTCACACCCGCTTTCTTGTTCATCAT | + |
Preference number: 6 (lower is better) Translates to: NCSLQMDCRAPRSLM*ESHPQSHTRFLVHH Trigger: ATGATGAACAAGAAAGCGGGTGTGAGACTGTGGATGGCTCTCCAACATCAGACTCCTCGGGGCACGACAGTCCATTTGCAGAGAACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | ATGGACAGTTCATCAACAATCTGCATCGCGCCGCTGTaGTTCTCCAACTCCTCACTCTTGCGCTTTAACCCG | + |
Preference number: 6 (lower is better) Translates to: MDSSSTICIAPL*FSNSSLLRFNP Trigger: CGGGTTAAAGCGCAAGAGTGAGGAGTTGGAGAATCACAGCGGCGCGATGCAGATTGTTGATGAACTGTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | CTGTGTGGAATCATTTTCCCCCAGTCTCCAAGCCTCTaGGAACCAGCCATGCCTTCAGAAGTTAGTGTTGCG | + |
Preference number: 6 (lower is better) Translates to: LCGIIFPQSPSL*EPAMPSEVSVA Trigger: CGCAACACTAACTTCTGAAGGCATGGCTGGTTCTCAGAGGCTTGGAGACTGGGGGAAAATGATTCCACACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | GGCCAGACAACATGTGCAATGCCCACGCTGATAGGCTaGGGGGCTGATAATGTGATCTGGTTGGTTAGAAGA | + |
Preference number: 6 (lower is better) Translates to: GQTTCAMPTLIG*GADNVIWLVRR Trigger: TCTTCTAACCAACCAGATCACATTATCAGCCCCTCAGCCTATCAGCGTGGGCATTGCACATGTTGTCTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | GACAGACGCTTCACGGCAAGTTCCGGCCTCTCCTTCTaGGGTATGATTGTCCTGTGTGTCTACACAACTTAC | + |
Preference number: 6 (lower is better) Translates to: DRRFTASSGLSF*GMIVLCVYTTY Trigger: GTAAGTTGTGTAGACACACAGGACAATCATACCTCAGAAGGAGAGGCCGGAACTTGCCGTGAAGCGTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | GTGGAGGGAAGATTGGTTTGTACTGAGTCTGATGAATaGTTGGGGATGGTAACAGGCGGGGGTTTATGCCCA | + |
Preference number: 6 (lower is better) Translates to: VEGRLVCTESDE*LGMVTGGGLCP Trigger: TGGGCATAAACCCCCGCCTGTTACCATCCCCAACCATTCATCAGACTCAGTACAAACCAATCTTCCCTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | GAGGGAAGATTGGTTTGTACTGAGTCTGATGAATGGTaGGGGATGGTAACAGGCGGGGGTTTATGCCCACTG | + |
Preference number: 6 (lower is better) Translates to: EGRLVCTESDEW*GMVTGGGLCPL Trigger: CAGTGGGCATAAACCCCCGCCTGTTACCATCCCCAACCATTCATCAGACTCAGTACAAACCAATCTTCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | TCGCTGTCACAACTGTCACTGGGTTTCCCATGTTGGTTTGCAACATaGCAGGAAGTATGGACAGTTCATCAACAATCTGCATCGCGCCGC | + |
Preference number: 6 (lower is better) Translates to: SLSQLSLGFPCWFAT*QEVWTVHQQSASRR Trigger: GCGGCGCGATGCAGATTGTTGATGAACTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAACCCAGTGACAGTTGTGACAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | AAGAATGTGGAGGGAAGATTGGTTTGTACTGAGTCTGATGAATGGTaGGGGATGGTAACAGGCGGGGGTTTATGCCCACTGGGACTTGGT | + |
Preference number: 6 (lower is better) Translates to: KNVEGRLVCTESDEW*GMVTGGGLCPLGLG Trigger: ACCAAGTCCCAGTGGGCATAAACCCCCGCCTGTTACCATCCCCAACCATTCATCAGACTCAGTACAAACCAATCTTCCCTCCACATTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | ACTCATCAGCGTTCTCTGTACTCAGCCTTGCCAAGATaGTCACTTCTATCTGCCCTTGACGTGCATACGAAG | + |
Preference number: 6 (lower is better) Translates to: THQRSLYSALPR*SLLSALDVHTK Trigger: CTTCGTATGCACGTCAAGGGCAGATAGAAGTGAGCATCTTGGCAAGGCTGAGTACAGAGAACGCTGATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | TTAGAAGAGGCGGTGGCATCACCGAGTTGTAATGATTaGTGTGTGGAATCATTTTCCCCCAGTCTCCAAGCC | + |
Preference number: 6 (lower is better) Translates to: LEEAVASPSCND*CVESFSPSLQA Trigger: GGCTTGGAGACTGGGGGAAAATGATTCCACACAGCAATCATTACAACTCGGTGATGCCACCGCCTCTTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | GAAGAACAGGCCGGATCACCTTCAGGGGCAGGGGACTaGATTTATTCTGTTTCAGGAAGTCATACAGGTTCT | + |
Preference number: 6 (lower is better) Translates to: EEQAGSPSGAGD*IYSVSGSHTGS Trigger: AGAACCTGTATGACTTCCTGAAACAGAATAAATTCAGTCCCCTGCCCCTGAAGGTGATCCGGCCTGTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | TTCTGGCACAACTTATTTTTCTTGGTAGTGGCAGGCTaGGGCCAGACAACATGTGCAATGCCCACGCTGATA | + |
Preference number: 6 (lower is better) Translates to: FWHNLFFLVVAG*GQTTCAMPTLI Trigger: TATCAGCGTGGGCATTGCACATGTTGTCTGGCCTCAGCCTGCCACTACCAAGAAAAATAAGTTGTGCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | GGAGCTGGTGCTCAGAGTGCTATCAGGACTGCTGAGTaGACACATCCGATCAATATTCAAAGTGCTTTGGCA | + |
Preference number: 6 (lower is better) Translates to: GAGAQSAIRTAE*THPINIQSALA Trigger: TGCCAAAGCACTTTGAATATTGATCGGATGTGTTCACTCAGCAGTCCTGATAGCACTCTGAGCACCAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | GCCTTTTCTCAATGGCTGGCATGTAGAATCCGTGTTTaGCATGTGCTCGTCAACACTCAGTCCACTTTCTCT | + |
Preference number: 6 (lower is better) Translates to: AFSQWLACRIRV*HVLVNTQSTFS Trigger: AGAGAAAGTGGACTGAGTGTTGACGAGCACATGGCAAACACGGATTCTACATGCCAGCCATTGAGAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | GGTTTCCCATGTTGGTTTGCAACATTGCAGGAAGTATaGACAGTTCATCAACAATCTGCATCGCGCCGCTGT | + |
Preference number: 6 (lower is better) Translates to: GFPCWFATLQEV*TVHQQSASRRC Trigger: ACAGCGGCGCGATGCAGATTGTTGATGAACTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | TTGCTGTCTTCGATGCCCAAAGTTTCCATTCCATTCTaGATGCCCAGTTCCGAAATGCTGAACCTGGCTCAG | + |
Preference number: 6 (lower is better) Translates to: LLSSMPKVSIPF*MPSSEMLNLAQ Trigger: CTGAGCCAGGTTCAGCATTTCGGAACTGGGCATCAAGAATGGAATGGAAACTTTGGGCATCGAAGACAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | CAGTATACGCAGGTGATGCTGCAATGTAAGAATGTGGAGGGAAGATaGGTTTGTACTGAGTCTGATGAATGGTTGGGGATGGTAACAGGC | + |
Preference number: 6 (lower is better) Translates to: QYTQVMLQCKNVEGR*VCTESDEWLGMVTG Trigger: GCCTGTTACCATCCCCAACCATTCATCAGACTCAGTACAAACCAATCTTCCCTCCACATTCTTACATTGCAGCATCACCTGCGTATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | CTGAGGAGCTGGTGCTCAGAGTGCTATCAGGACTGCTaGGTGAACACATCCGATCAATATTCAAAGTGCTTT | + |
Preference number: 6 (lower is better) Translates to: LRSWCSECYQDC*VNTSDQYSKCF Trigger: AAAGCACTTTGAATATTGATCGGATGTGTTCACTCAGCAGTCCTGATAGCACTCTGAGCACCAGCTCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | GCCGATCCAAAGTCTATCACTTTAACCCTGTACGGCTaGCGAACAGGATCCACCAACATAATATTCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: ADPKSITLTLYG*RTGSTNIIFSG Trigger: ACCAGAGAATATTATGTTGGTGGATCCTGTTCGCCAGCCGTACAGGGTTAAAGTGATAGACTTTGGATCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | GGTTTATGCCCACTGGGACTTGGTGAACTATGCCACTaGGATGGGAGATATTGTAAGTTGGATGCTGTAACA | + |
Preference number: 6 (lower is better) Translates to: GLCPLGLGELCH*DGRYCKLDAVT Trigger: TGTTACAGCATCCAACTTACAATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCATAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | CAAGCGGAACTGTATTGTCTACCCTTATGGAATAACTaGTGGGTTTACCATGTGCTGCAGGAATACCTTGGA | + |
Preference number: 6 (lower is better) Translates to: QAELYCLPLWNN*WVYHVLQEYLG Trigger: TCCAAGGTATTCCTGCAGCACATGGTAAACCCACCAGTTATTCCATAAGGGTAGACAATACAGTTCCGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | CCTGAGTTACAAGCGGAACTGTATTGTCTACCCTTATaGAATAACTGGTGGGTTTACCATGTGCTGCAGGAA | + |
Preference number: 6 (lower is better) Translates to: PELQAELYCLPL*NNWWVYHVLQE Trigger: TTCCTGCAGCACATGGTAAACCCACCAGTTATTCCATAAGGGTAGACAATACAGTTCCGCTTGTAACTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | AATATATGCTTGCTGTCTTCGATGCCCAAAGTTTCCATTCCATTCTaGATGCCCAGTTCCGAAATGCTGAACCTGGCTCAGGTTCAAATG | + |
Preference number: 6 (lower is better) Translates to: NICLLSSMPKVSIPF*MPSSEMLNLAQVQM Trigger: CATTTGAACCTGAGCCAGGTTCAGCATTTCGGAACTGGGCATCAAGAATGGAATGGAAACTTTGGGCATCGAAGACAGCAAGCATATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | CAACTGTCACTGGGTTTCCCATGTTGGTTTGCAACATaGCAGGAAGTATGGACAGTTCATCAACAATCTGCA | + |
Preference number: 6 (lower is better) Translates to: QLSLGFPCWFAT*QEVWTVHQQSA Trigger: TGCAGATTGTTGATGAACTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAACCCAGTGACAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | AGAAAGCGTGAATGGATTACTGGTAACACTAGTAGGAATATATGCTaGCTGTCTTCGATGCCCAAAGTTTCCATTCCATTCTTGATGCCC | + |
Preference number: 6 (lower is better) Translates to: RKREWITGNTSRNIC*LSSMPKVSIPFLMP Trigger: GGGCATCAAGAATGGAATGGAAACTTTGGGCATCGAAGACAGCAAGCATATATTCCTACTAGTGTTACCAGTAATCCATTCACGCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | ATCTTTGTCTGGAAAGCACTACCTTTCGTGGAAGGATaGGAATTGCCAAAGTTTCTACCATTCACATGGATC | + |
Preference number: 6 (lower is better) Translates to: IFVWKALPFVEG*ELPKFLPFTWI Trigger: GATCCATGTGAATGGTAGAAACTTTGGCAATTCTCATCCTTCCACGAAAGGTAGTGCTTTCCAGACAAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | CGTGAATGGATTACTGGTAACACTAGTAGGAATATATaGTTGCTGTCTTCGATGCCCAAAGTTTCCATTCCA | + |
Preference number: 6 (lower is better) Translates to: REWITGNTSRNI*LLSSMPKVSIP Trigger: TGGAATGGAAACTTTGGGCATCGAAGACAGCAAGCATATATTCCTACTAGTGTTACCAGTAATCCATTCACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | AGTAGCGAGATTGAAGATACGTTGAGCAAACAGTCTTaGATACATGACTGGCCGATCCAAAGTCTATCACTT | + |
Preference number: 6 (lower is better) Translates to: SSEIEDTLSKQS*IHDWPIQSLSL Trigger: AAGTGATAGACTTTGGATCGGCCAGTCATGTATCAAAGACTGTTTGCTCAACGTATCTTCAATCTCGCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CCA 72 bp | TTCGATGCGACTGGTCGTAAGAGTGACATTTTACTGTaGTTATTTGTTTCACATGAACTCGGAGACTTACAA | + |
Preference number: 6 (lower is better) Translates to: FDATGRKSDILL*LFVSHELGDLQ Trigger: TTGTAAGTCTCCGAGTTCATGTGAAACAAATAACCACAGTAAAATGTCACTCTTACGACCAGTCGCATCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 72 bp | GAATGGATTACTGGTAACACTAGTAGGAATATATGCTaGCTGTCTTCGATGCCCAAAGTTTCCATTCCATTC | + |
Preference number: 6 (lower is better) Translates to: EWITGNTSRNIC*LSSMPKVSIPF Trigger: GAATGGAATGGAAACTTTGGGCATCGAAGACAGCAAGCATATATTCCTACTAGTGTTACCAGTAATCCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS GCA 72 bp | AATGGATTACTGGTAACACTAGTAGGAATATATGCTTaGTGTCTTCGATGCCCAAAGTTTCCATTCCATTCT | + |
Preference number: 6 (lower is better) Translates to: NGLLVTLVGIYA*CLRCPKFPFHS Trigger: AGAATGGAATGGAAACTTTGGGCATCGAAGACAGCAAGCATATATTCCTACTAGTGTTACCAGTAATCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS TCA 72 bp | TTGTTTCACATGAACTCGGAGACTTACAAATATCCATaGTATGAAAACAGGACTTTACATGGTTGCTGTGAG | + |
Preference number: 6 (lower is better) Translates to: LFHMNSETYKYP*YENRTLHGCCE Trigger: CTCACAGCAACCATGTAAAGTCCTGTTTTCATATCATGGATATTTGTAAGTCTCCGAGTTCATGTGAAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |
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CDS CAA 90 bp | TTCCCACTGATTATCTTTGGAGAAATAAATGCTGAATGTGGGATATaGGTGTTCTGCAATGAATTACTCCTGTTCTGGCACAACTTATTT | + |
Preference number: 6 (lower is better) Translates to: FPLIIFGEINAECGI*VFCNELLLFWHNLF Trigger: AAATAAGTTGTGCCAGAACAGGAGTAATTCATTGCAGAACACCAATATCCCACATTCAGCATTTATTTCTCCAAAGATAATCAGTGGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 |
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CDS CCA 72 bp | GGAAAATCTAGTAGATGCTTCATATTAACGAATGGGTaGTTCAGAGTCTCAATTGGAGTAATTCTTAAATCT | + |
Preference number: 6 (lower is better) Translates to: GKSSRCFILTNG*FRVSIGVILKS Trigger: AGATTTAAGAATTACTCCAATTGAGACTCTGAACCACCCATTCGTTAATATGAAGCATCTACTAGATTTTCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028600.14 ENSMUST00000111124.8 ENSMUST00000111125.3 |