Pregenerated sensors for HINT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019791Ensembl transcript IDs: ENSMUST00000019925.7, ENSMUST00000160646.3, ENSMUST00000161074.8
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTaGAAAGAGAACAAACCAACAGTTCTTCTGAATCAG | + |
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Preference number: 3 (lower is better) Translates to: MYESANLRLQLA*KENKPTVLLNQ Trigger: CTGATTCAGAAGAACTGTTGGTTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR CCA 90 bp | GATGGAACAGAATGGAGGAACATGGAAACCCATTCTTACATCTGTGAAGTCAGTGAAAGAGTTCAGTTTTaGGTTCCTGACCCGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: DGTEWRNMETHSYICEVSERVQF*VPDPPP Trigger: TGGCGGCGGGTCAGGAACCCAAAACTGAACTCTTTC...ACTGACTTCACAGATGTAAGAATGGGTTTCCATGTTCCTCCATTCTGTTCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS-3UTR GCA 90 bp | TATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACAAACCAACATCCCAGCAGCCACCATaGTCTCGACCATTTCTATGT | + |
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Preference number: 4 (lower is better) Translates to: YESANLRLQLACKENKPTSQQPP*SRPFLC Trigger: ACATAGAAATGGTCGAGAGCATGGTGGCTGCTGGGA...TGTTGGTTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR CCA 90 bp | GCAATTAGCCTGCAAAGAGAACAAACCAACAGTTCTTCTGAATCAGGTAAGGAAGAAAGAGTTCAGTTTTaGGTTCCTGACCCGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: AISLQREQTNSSSESGKEERVQF*VPDPPP Trigger: TGGCGGCGGGTCAGGAACCCAAAACTGAACTCTTTC...TTCCTTACCTGATTCAGAAGAACTGTTGGTTTGTTCTCTTTGCAGGCTAATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR CCA 90 bp | AGTGGTAGTGTCATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGGTGCAGATGAGAGATaGAACAGAATGGAGGAACAT | + |
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Preference number: 4 (lower is better) Translates to: SGSVMYESANLRLQLACKGADER*NRMEEH Trigger: ATGTTCCTCCATTCTGTTCCATCTCTCATCTGCACC...TTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACATGACACTACCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR TCA 90 bp | GCAGCCACCATGCTCTCGACTCTAAAGAGTCTAGTCTCATTTATCCGTTGTAGATCTTCATTCTCACAGTaGAAGAGTTCAGTTTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AATMLSTLKSLVSFIRCRSSFSQ*KSSVLG Trigger: ACCCAAAACTGAACTCTTTCACTGTGAGAATGAAGA...TCTACAACGGATAAATGAGACTAGACTCTTTAGAGTCGAGAGCATGGTGGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS-3UTR TCA 90 bp | AGTGGTAGTGTCATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAAGAAGCCAAACTCTTTaGCTGGTGCTATCACATGAA | + |
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Preference number: 4 (lower is better) Translates to: SGSVMYESANLRLQLACKRSQTL*LVLSHE Trigger: TTCATGTGATAGCACCAGTCAAAGAGTTTGGCTTCT...TTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACATGACACTACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR CCA 90 bp | CCAGCAGCCACCATGCTCTCGACTCTAAAGAGTCTAGTCTCATTTATCCGTTGTTCCAATATGCTTCTTTaGCACGACGAGATAATGATA | + |
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Preference number: 4 (lower is better) Translates to: PAATMLSTLKSLVSFIRCSNMLL*HDEIMI Trigger: TATCATTATCTCGTCGTGCCAAAGAAGCATATTGGA...ACAACGGATAAATGAGACTAGACTCTTTAGAGTCGAGAGCATGGTGGCTGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS-3UTR TCA 90 bp | GCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACAAACCAACAGTTCTTCTGTCTTCATTCTCACAGTaGAAGAGTTCAGTTTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ANLRLQLACKENKPTVLLSSFSQ*KSSVLG Trigger: ACCCAAAACTGAACTCTTTCACTGTGAGAATGAAGA...CAGAAGAACTGTTGGTTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR TCA 90 bp | GTCATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACAAAGCAAGTAATCAACTGTaGCAAACCAGTAGGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: VMYESANLRLQLACKENKASNQL*QTSRNP Trigger: AGGATTCCTACTGGTTTGTCACAGTTGATTACTTGC...TTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR TCA 90 bp | GCAGCCACCATGCTCTCGACTCTAAAGAGTCTAGTCTCATTTATCCGTTGTAGAAGACCCATTTCTATGTaGTCTTTGTTTAGATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AATMLSTLKSLVSFIRCRRPISM*SLFRSL Trigger: CAAGGATCTAAACAAAGATCACATAGAAATGGGTCT...TCTACAACGGATAAATGAGACTAGACTCTTTAGAGTCGAGAGCATGGTGGCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS-3UTR GCA 90 bp | TATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACAAACCAACAAAACTCTTTGACTGGTaGTATCACATGAAGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YESANLRLQLACKENKPTKLFDW*YHMKVQ Trigger: CTGCACCTTCATGTGATAGCACCAGTCAAAGAGTTT...TGTTGGTTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR CCA 90 bp | TATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACAAACCAACACAGAATGGAGGAACATaGAAACCCATTCTTACATCT | + |
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Preference number: 4 (lower is better) Translates to: YESANLRLQLACKENKPTQNGGT*KPILTS Trigger: AGATGTAAGAATGGGTTTCCATGTTCCTCCATTCTG...TGTTGGTTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR TCA 90 bp | TATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACAAACCAACATCGACCATTTCTATGTaGTCTTTGTTTAGATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YESANLRLQLACKENKPTSTISM*SLFRSL Trigger: CAAGGATCTAAACAAAGATCACATAGAAATGGTCGA...TGTTGGTTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR GCA 90 bp | AGTGTCATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACGAGATAATGATAAAGTaGCGCTGGTTTGATATCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVMYESANLRLQLACKENEIMIK*RWFDIF Trigger: AAAGATATCAAACCAGCGGCACTTTATCATTATCTC...GTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACATGACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR GCA 90 bp | ACAGAATGGAGGAACATGGAAACCCATTCTTACATCTGTGAAGTCAGTGAAATTTTGCAACTTCCAATATaGTTCTTTGGCACGACGAGA | + |
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Preference number: 4 (lower is better) Translates to: TEWRNMETHSYICEVSEILQLPI*FFGTTR Trigger: TCTCGTCGTGCCAAAGAAGCATATTGGAAGTTGCAA...AATTTCACTGACTTCACAGATGTAAGAATGGGTTTCCATGTTCCTCCATTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS-3UTR GCA 90 bp | ATTAGCCTGCAAAGAGAACAAACCAACAGTTCTTCTGAATCAGGTAAGGAACTTTTGCAACTTCCAATATaGTTCTTTGGCACGACGAGA | + |
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Preference number: 4 (lower is better) Translates to: ISLQREQTNSSSESGKELLQLPI*FFGTTR Trigger: TCTCGTCGTGCCAAAGAAGCATATTGGAAGTTGCAA...AAGTTCCTTACCTGATTCAGAAGAACTGTTGGTTTGTTCTCTTTGCAGGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR GCA 90 bp | GATGGAACAGAATGGAGGAACATGGAAACCCATTCTTACATCTGTGAAGTCAGTGAGATAATGATAAAGTaGCGCTGGTTTGATATCTTT | + |
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Preference number: 4 (lower is better) Translates to: DGTEWRNMETHSYICEVSEIMIK*RWFDIF Trigger: AAAGATATCAAACCAGCGGCACTTTATCATTATCTC...ACTGACTTCACAGATGTAAGAATGGGTTTCCATGTTCCTCCATTCTGTTCCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS-3UTR CCA 90 bp | GCAATTAGCCTGCAAAGAGAACAAACCAACAGTTCTTCTGAATCAGGTAAGGAATCCAATATGCTTCTTTaGCACGACGAGATAATGATA | + |
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Preference number: 4 (lower is better) Translates to: AISLQREQTNSSSESGKESNMLL*HDEIMI Trigger: TATCATTATCTCGTCGTGCCAAAGAAGCATATTGGA...TTCCTTACCTGATTCAGAAGAACTGTTGGTTTGTTCTCTTTGCAGGCTAATTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR GCA 90 bp | CCCATTCTTACATCTGTGAAGTCAGTGAAATTATTCCTCTCAAGCATGGTTTTCCTTTGTTTAGATCCTTaGAACTTCCAATATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PILTSVKSVKLFLSSMVFLCLDP*NFQYAS Trigger: AGAAGCATATTGGAAGTTGCAAGGATCTAAACAAAG...GAAAACCATGCTTGAGAGGAATAATTTCACTGACTTCACAGATGTAAGAATGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS GCA 90 bp | CAGTTTTGGGTTCCTGACCCGCCGCCACGCGGCAGAACACGCAGTTaGTGTCATAGTTCCAGGACTCCGAGGTCCCAGGCGAGGACCCCT | + |
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Preference number: 5 (lower is better) Translates to: QFWVPDPPPRGRTRS*CHSSRTPRSQARTP Trigger: AGGGGTCCTCGCCTGGGACCTCGGAGTCCTGGAACTATGACAGCAACTGCGTGTTCTGCCGCGTGGCGGCGGGTCAGGAACCCAAAACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019925.7 ENSMUST00000160646.3 ENSMUST00000161074.8 |
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| CDS TCA 90 bp | AGCATGGTTTTCCCAGCAGCCACCATGCTCTCGACCATTTCTATGTaGTCTTTGTTTAGATCCTTGCAACTTCCAATATGCTTCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: SMVFPAATMLSTISM*SLFRSLQLPICFFG Trigger: GCCAAAGAAGCATATTGGAAGTTGCAAGGATCTAAACAAAGATCACATAGAAATGGTCGAGAGCATGGTGGCTGCTGGGAAAACCATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019925.7 ENSMUST00000161074.8 |
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| CDS-3UTR CAA 90 bp | AGTGGTAGTGTCATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGCCTGTAAACCAGCTTaGATAAGAAGCCAAACTCTT | + |
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Preference number: 5 (lower is better) Translates to: SGSVMYESANLRLQLACKACKPA*IRSQTL Trigger: AAGAGTTTGGCTTCTTATCAAAGCTGGTTTACAGGC...TTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACATGACACTACCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS GCA 90 bp | GCAACTTCCAATATGCTTCTTTGGCACGACGAGATAATGATAAAGTaGCGCTGGTTTGATATCTTTGAAACAAACCAGGTCTTCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: ATSNMLLWHDEIMIK*RWFDIFETNQVFIL Trigger: GAGAATGAAGACCTGGTTTGTTTCAAAGATATCAAACCAGCGGCACTTTATCATTATCTCGTCGTGCCAAAGAAGCATATTGGAAGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019925.7 ENSMUST00000160646.3 ENSMUST00000161074.8 |
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| CDS-3UTR CAA 90 bp | GATGGAACAGAATGGAGGAACATGGAAACCCATTCTTACATCTGTGAAGTCAGTTTCCAATATGCTTCTTaGGCACGACGAGATAATGAT | + |
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Preference number: 5 (lower is better) Translates to: DGTEWRNMETHSYICEVSFQYAS*ARRDND Trigger: ATCATTATCTCGTCGTGCCAAAGAAGCATATTGGAA...ACTGACTTCACAGATGTAAGAATGGGTTTCCATGTTCCTCCATTCTGTTCCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS-3UTR CAA 90 bp | GTCATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAAGAGAACAAATTCCAATATGCTTCTTaGGCACGACGAGATAATGAT | + |
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Preference number: 5 (lower is better) Translates to: VMYESANLRLQLACKENKFQYAS*ARRDND Trigger: ATCATTATCTCGTCGTGCCAAAGAAGCATATTGGAA...TTTGTTCTCTTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACATGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS-3UTR CAA 90 bp | AGTGGTAGTGTCATGTATGAGTCAGCAAACCTCAGACTGCAATTAGCCTGCAAATCTTTGTTTAGATCCTaGCAACTTCCAATATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SGSVMYESANLRLQLACKSLFRS*QLPICF Trigger: GAAGCATATTGGAAGTTGCAAGGATCTAAACAAAGA...TTTGCAGGCTAATTGCAGTCTGAGGTTTGCTGACTCATACATGACACTACCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161074.8 |
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| CDS GCA 90 bp | CCACCATGCTCTCGACCATTTCTATGTGATCTTTGTTTAGATCCTTaGAACTTCCAATATGCTTCTTTGGCACGACGAGATAATGATAAA | + |
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Preference number: 5 (lower is better) Translates to: PPCSRPFLCDLCLDP*NFQYASLARRDNDK Trigger: TTTATCATTATCTCGTCGTGCCAAAGAAGCATATTGGAAGTTGCAAGGATCTAAACAAAGATCACATAGAAATGGTCGAGAGCATGGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019925.7 ENSMUST00000161074.8 |
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| CDS-3UTR CAA 90 bp | CCCATTCTTACATCTGTGAAGTCAGTGAAATTATTCCTCTCAAGCATGGTTTTCTCTTTGTTTAGATCCTaGCAACTTCCAATATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PILTSVKSVKLFLSSMVFSLFRS*QLPICF Trigger: GAAGCATATTGGAAGTTGCAAGGATCTAAACAAAGA...GAAAACCATGCTTGAGAGGAATAATTTCACTGACTTCACAGATGTAAGAATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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| CDS GCA 72 bp | GTTCCTGACCCGCCGCCACGCGGCAGAACACGCAGTTaGTGTCATAGTTCCAGGACTCCGAGGTCCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: VPDPPPRGRTRS*CHSSRTPRSQA Trigger: CGCCTGGGACCTCGGAGTCCTGGAACTATGACAGCAACTGCGTGTTCTGCCGCGTGGCGGCGGGTCAGGAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019925.7 ENSMUST00000160646.3 ENSMUST00000161074.8 |
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| CDS TCA 72 bp | TTCCCAGCAGCCACCATGCTCTCGACCATTTCTATGTaGTCTTTGTTTAGATCCTTGCAACTTCCAATATGC | + |
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Preference number: 6 (lower is better) Translates to: FPAATMLSTISM*SLFRSLQLPIC Trigger: GCATATTGGAAGTTGCAAGGATCTAAACAAAGATCACATAGAAATGGTCGAGAGCATGGTGGCTGCTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019925.7 ENSMUST00000161074.8 |
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| CDS GCA 72 bp | TATTCCTCTCAAGCATGGTTTTCCCAGCAGCCACCATaGTCTCGACCATTTCTATGTGATCTTTGTTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: YSSQAWFSQQPP*SRPFLCDLCLD Trigger: ATCTAAACAAAGATCACATAGAAATGGTCGAGAGCATGGTGGCTGCTGGGAAAACCATGCTTGAGAGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019925.7 ENSMUST00000161074.8 |
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| CDS CAA 72 bp | CTTTGTTTAGATCCTTGCAACTTCCAATATGCTTCTTaGGCACGACGAGATAATGATAAAGTGCCGCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LCLDPCNFQYAS*ARRDNDKVPLV Trigger: AACCAGCGGCACTTTATCATTATCTCGTCGTGCCAAAGAAGCATATTGGAAGTTGCAAGGATCTAAACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019925.7 ENSMUST00000160646.3 ENSMUST00000161074.8 |
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| CDS GCA 72 bp | AATATGCTTCTTTGGCACGACGAGATAATGATAAAGTaGCGCTGGTTTGATATCTTTGAAACAAACCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: NMLLWHDEIMIK*RWFDIFETNQV Trigger: GACCTGGTTTGTTTCAAAGATATCAAACCAGCGGCACTTTATCATTATCTCGTCGTGCCAAAGAAGCATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019925.7 ENSMUST00000160646.3 ENSMUST00000161074.8 |
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| CDS GCA 72 bp | TCTCGACCATTTCTATGTGATCTTTGTTTAGATCCTTaGAACTTCCAATATGCTTCTTTGGCACGACGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SRPFLCDLCLDP*NFQYASLARRD Trigger: ATCTCGTCGTGCCAAAGAAGCATATTGGAAGTTGCAAGGATCTAAACAAAGATCACATAGAAATGGTCGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019925.7 ENSMUST00000161074.8 |
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| CDS GCA 72 bp | ACAGACCCATTTCTATGTGATCTTTGTTTAGATCCTTaGAACTTCCAATATGCTTCTTTGGCACGACGAGAT | + |
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Preference number: 6 (lower is better) Translates to: TDPFLCDLCLDP*NFQYASLARRD Trigger: ATCTCGTCGTGCCAAAGAAGCATATTGGAAGTTGCAAGGATCTAAACAAAGATCACATAGAAATGGGTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160646.3 |
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