Pregenerated sensors for HINFP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032119Ensembl transcript IDs: ENSMUST00000034629.6, ENSMUST00000214660.2, ENSMUST00000216508.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTGGGTTCCCTGGTATCCCCATCGCACCAAACCCTTCAAACACTaGAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTGCTTAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SWVPWYPHRTKPFKH*NPSRAAFFVLLLRR Trigger: CCTCCTAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTTTGGTGCGATGGGGATACCAGGGAACCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR GCA 90 bp | AGTGTTTTGCCTGCATGTATGTCTGTGTACCACATGCACGTTTCATaGTCACAGAGGCCAGCAGAGGGCATCAGATCTCCTGGAACTGGG | + |
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Preference number: 1 (lower is better) Translates to: SVLPACMSVYHMHVS*SQRPAEGIRSPGTG Trigger: CCCAGTTCCAGGAGATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTGGTACACAGACATACATGCAGGCAAAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR TCA 90 bp | GCAGAGGGCATCAGATCTCCTGGAACTGGGAGTTATAGATGGCCTTaGGCTACCTGTGGGTACTCATACCTGAACCTGAATCCTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: AEGIRSPGTGSYRWP*ATCGYSYLNLNPLE Trigger: TTCCAGAGGATTCAGGTTCAGGTATGAGTACCCACAGGTAGCTCAAGGCCATCTATAACTCCCAGTTCCAGGAGATCTGATGCCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR GCA 90 bp | AGCCAACAAAAGGGCAATATGCATGGGGATGGCTCGGTCAGTAAGTaGTTGCTCTACAAACACAAGGATCTGAGCCCAGACACCCAACAC | + |
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Preference number: 1 (lower is better) Translates to: SQQKGNMHGDGSVSK*LLYKHKDLSPDTQH Trigger: GTGTTGGGTGTCTGGGCTCAGATCCTTGTGTTTGTAGAGCAAGCACTTACTGACCGAGCCATCCCCATGCATATTGCCCTTTTGTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR GCA 90 bp | CCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTaGTTAGGAGGAAGCCTCTTCCTGCAGTCTTCCCGAACTTCTACA | + |
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Preference number: 1 (lower is better) Translates to: PSNTAILLGLPSLCY*LGGSLFLQSSRTST Trigger: TGTAGAAGTTCGGGAAGACTGCAGGAAGAGGCTTCCTCCTAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CCA 90 bp | TCAGTTTCCAGCACCCACCTGTCTTTAACTTCAGTTCCAGAGGATTaGTCACCCTTTTTACCTGCATGGACACTGCTTGACTATGATATA | + |
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Preference number: 1 (lower is better) Translates to: SVSSTHLSLTSVPED*SPFLPAWTLLDYDI Trigger: TATATCATAGTCAAGCAGTGTCCATGCAGGTAAAAAGGGTGACCAATCCTCTGGAACTGAAGTTAAAGACAGGTGGGTGCTGGAAACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CCA 90 bp | TTAATCAAGCATTTAAACAAGTGTTCTACCATTGAGCTACATTCATaGCCCCTAGAGCCGCGTCTTTCTCTCCTGTTACATGATAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LIKHLNKCSTIELHS*PLEPRLSLLLHDSS Trigger: GGAACTATCATGTAACAGGAGAGAAAGACGCGGCTCTAGGGGCCATGAATGTAGCTCAATGGTAGAACACTTGTTTAAATGCTTGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR TCA 90 bp | GGTAACAGCTCCTCTAATAAGAACATACATGTAGGATTTCCTCAATaGATCCAACTCCCCAGAGTCTATAGAATGATGCCTTCTGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: GNSSSNKNIHVGFPQ*IQLPRVYRMMPSES Trigger: TGACTCAGAAGGCATCATTCTATAGACTCTGGGGAGTTGGATTCATTGAGGAAATCCTACATGTATGTTCTTATTAGAGGAGCTGTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CCA 90 bp | ATACACAGTATCTATAATCGTGTCCCTGAAGATAACAAGTGTCCCTaGAATGTAAAAGGAAACCTTGAGAGAAATGGCACCTGGTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: IHSIYNRVPEDNKCP*NVKGNLERNGTWFS Trigger: TGAGAACCAGGTGCCATTTCTCTCAAGGTTTCCTTTTACATTCCAGGGACACTTGTTATCTTCAGGGACACGATTATAGATACTGTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR TCA 90 bp | CCGCGTCTTTCTCTCCTGTTACATGATAGTTCCTTTGATAGGAAGTaGATGCCAAGTTCTCTACCAAAGCCTTTTTGTCTTTTAGGATTA | + |
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Preference number: 1 (lower is better) Translates to: PRLSLLLHDSSFDRK*MPSSLPKPFCLLGL Trigger: TAATCCTAAAAGACAAAAAGGCTTTGGTAGAGAACTTGGCATTCACTTCCTATCAAAGGAACTATCATGTAACAGGAGAGAAAGACGCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR GCA 90 bp | AAACGATTTCTTTACCCCTTCCTGCTACACTACATGAAAGGACCATaGTCTTCATTTATTCCAGTCCTGAGCAGTTTATTCATTCATTTC | + |
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Preference number: 1 (lower is better) Translates to: KRFLYPFLLHYMKGP*SSFIPVLSSLFIHF Trigger: GAAATGAATGAATAAACTGCTCAGGACTGGAATAAATGAAGAGCATGGTCCTTTCATGTAGTGTAGCAGGAAGGGGTAAAGAAATCGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR TCA 90 bp | CACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATCTCCTGGATCCAAGAACAAAGGCTaGCCCCTGGGGCACCGCTTC | + |
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Preference number: 2 (lower is better) Translates to: HMHVSCSQRPAEGIRSPGSKNKG*PLGHRF Trigger: GAAGCGGTGCCCCAGGGGTCAGCCTTTGTTCTTGGA...TCCAGGAGATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGCAAGTGCTCTTAACCACTGTGTCACCTCTCCAGTCCACACATGTTACACAAAGGCTGACCCCTaGGGCACCGCTTCCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RTASALNHCVTSPVHTCYTKADP*GTASCP Trigger: TGGGCAGGAAGCGGTGCCCCAGGGGTCAGCCTTTGT...GTAACATGTGTGGACTGGAGAGGTGACACAGTGGTTAAGAGCACTTGCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATACACACATGCCTGCCAGTGTTCAGCTGTCTCTACACTAAGGATCTGCCTGGGTGGGGTGGGGGCTaGAGAGATGGCTCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: QIHTCLPVFSCLYTKDLPGWGGG*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGCCCCCACCCCACCC...AGGCAGATCCTTAGTGTAGAGACAGCTGAACACTGGCAGGCATGTGTGTATTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 90 bp | CAACAAAAGAGGCTGGAGAGATGGCTAAGCAGGCGAGAGCACTTGTaGCTCTTGCAGAGAACCACATTCAGTTTCCAGCACCCACCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QQKRLERWLSRREHL*LLQRTTFSFQHPPV Trigger: GACAGGTGGGTGCTGGAAACTGAATGTGGTTCTCTGCAAGAGCAACAAGTGCTCTCGCCTGCTTAGCCATCTCTCCAGCCTCTTTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 90 bp | GGCTCTCTCTGCATAGCCCTGAATGTCCTGGAACATAGACCAGACTaGCCTCCAATTCAAGGGATCTGCTGGACTCTCCTGAATGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GSLCIALNVLEHRPD*PPIQGICWTLLNAG Trigger: ACCAGCATTCAGGAGAGTCCAGCAGATCCCTTGAATTGGAGGCAAGTCTGGTCTATGTTCCAGGACATTCAGGGCTATGCAGAGAGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTACCACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATTCAAACTTCAAGATGTaGAGCAGGACCGGCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: LCTTCTFHAHRGQQRASDSNFKM*SRTGQT Trigger: AGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGA...ATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTGGTACACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 90 bp | AAGAGGCTGGAGAGATGGCTAAGCAGGCGAGAGCACTTGTTGCTCTaGCAGAGAACCACATTCAGTTTCCAGCACCCACCTGTCTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: KRLERWLSRREHLLL*QRTTFSFQHPPVFN Trigger: GTTAAAGACAGGTGGGTGCTGGAAACTGAATGTGGTTCTCTGCAAGAGCAACAAGTGCTCTCGCCTGCTTAGCCATCTCTCCAGCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 90 bp | GCACCAAACCCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTaGTGTTACTGCTTAGGAGGAAGCCTCTTCCTGCAGTCTTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: APNPSNTAILLGLPS*CYCLGGSLFLQSSR Trigger: TCGGGAAGACTGCAGGAAGAGGCTTCCTCCTAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTTTGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAGAGGTCCTCAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCAGGCGAGAGCACTTGTTaGTCTTGCAGAGAACCACAT | + |
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Preference number: 2 (lower is better) Translates to: SSRGPQFNSQQPHGGSQPGESTC*SCREPH Trigger: ATGTGGTTCTCTGCAAGAGCAACAAGTGCTCTCGCC...TGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTGAGGACCTCTGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR TCA 90 bp | CAACACAATCAAGATAATCCCACACAGACATGCTCACAATGGGTCAGCGAGATCTGCCTCCAGAGGACCTaGGTTCAATTCCCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: QHNQDNPTQTCSQWVSEICLQRT*VQFPAW Trigger: CCATGCTGGGAATTGAACTCAGGTCCTCTGGAGGCA...GATCTCGCTGACCCATTGTGAGCATGTCTGTGTGGGATTATCTTGATTGTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | TACACTTCTGTAATAGGCAGTTTTTGCAGTAAGAAATCAGGAGCTGAGTATGGTGGACCGGCCAGACTCTaGAGCCTCAGCCCACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: YTSVIGSFCSKKSGAEYGGPARL*SLSPPG Trigger: TCCAGGTGGGCTGAGGCTGCAGAGTCTGGCCGGTCC...ACCATACTCAGCTCCTGATTTCTTACTGCAAAAACTGCCTATTACAGAAGTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGAACAGCAAGTGCTCTTAACCACTGTGTCACCTCTCCAGTCCACACATGAGGAAGCCTCTTCCTaGAGTCTTCCCGAACTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LEEQQVLLTTVSPLQSTHEEASS*SLPELL Trigger: TAGAAGTTCGGGAAGACTGCAGGAAGAGGCTTCCTC...ATGTGTGGACTGGAGAGGTGACACAGTGGTTAAGAGCACTTGCTGTTCTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 90 bp | CAACAAAAGGGCAATATGCATGGGGATGGCTCGGTCAGTAAGTGCTaGCTCTACAAACACAAGGATCTGAGCCCAGACACCCAACACTTA | + |
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Preference number: 2 (lower is better) Translates to: QQKGNMHGDGSVSKC*LYKHKDLSPDTQHL Trigger: TAAGTGTTGGGTGTCTGGGCTCAGATCCTTGTGTTTGTAGAGCAAGCACTTACTGACCGAGCCATCCCCATGCATATTGCCCTTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCTCTCTCTGCATAGCCCTGAATGTCCTGGAACATAGACCAGACTTGCCTAGTCGAGAAAACAGGTaGGAGTGCACATACCATGTA | + |
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Preference number: 2 (lower is better) Translates to: TGSLCIALNVLEHRPDLPSRENR*ECTYHV Trigger: TACATGGTATGTGCACTCTCACCTGTTTTCTCGACT...AGGCAAGTCTGGTCTATGTTCCAGGACATTCAGGGCTATGCAGAGAGAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | AAACCCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTGCTTGAGACAGGCTCTCTCTaGATAGCCCTGAATGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KPFKHCNPSRAAFFVLLLETGSL*IALNVL Trigger: CAGGACATTCAGGGCTATGCAGAGAGAGCCTGTCTC...AAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGAACAGCAAGTGCTCTTAACCACTGTGTCACCTCTCCAGTCCACACATCCTTCTTTGTGTTACTaGTTAGGAGGAAGCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LEEQQVLLTTVSPLQSTHPSLCY*LGGSLF Trigger: GAAGAGGCTTCCTCCTAAGCAGTAACACAAAGAAGG...ATGTGTGGACTGGAGAGGTGACACAGTGGTTAAGAGCACTTGCTGTTCTTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGAACAGCAAGTGCTCTTAACCACTGTGTCACCTCTCCAGTCCACACATGTCACAACTGGAAACTaGACTTATGCCTTTGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LEEQQVLLTTVSPLQSTHVTTGN*TYAFVR Trigger: CCTAACAAAGGCATAAGTTCAGTTTCCAGTTGTGAC...ATGTGTGGACTGGAGAGGTGACACAGTGGTTAAGAGCACTTGCTGTTCTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGCACAGGGTTCTAATTAGAACGGAGGGTACTGTCCAGGAGCCATTTGTATCCCCAAAAGACAACTaGCACACATACACAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: QRHRVLIRTEGTVQEPFVSPKDN*HTYTVS Trigger: AGATACTGTGTATGTGTGGCAGTTGTCTTTTGGGGA...TACAAATGGCTCCTGGACAGTACCCTCCGTTCTAATTAGAACCCTGTGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGACACATATCACAGTCAAGAGCAGAGAACAAATACACACATGCCTGCCAGTAAGTGGAAGATGCTCTaGAGGAAGTGGACTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LDTYHSQEQRTNTHMPASKWKML*RKWTPP Trigger: AGGAGGAGTCCACTTCCTCCAGAGCATCTTCCACTT...ACTGGCAGGCATGTGTGTATTTGTTCTCTGCTCTTGACTGTGATATGTGTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR TCA 90 bp | AACCCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTGCTTAAGCACTCATTCATGGTaGAGTCCATGGAGCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NPSNTAILLGLPSLCYCLSTHSW*SPWSFL Trigger: AAGGAAGCTCCATGGACTTCACCATGAATGAGTGCT...TAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | GAGACTCTCTTTGCAGGTGACTCTAGATTACGTCAAGTTGGCAAATTAACTGTCCACAGAAGTGGAAGATaGTCTGGAGGAAGTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: ETLFAGDSRLRQVGKLTVHRSGR*SGGSGL Trigger: GAGTCCACTTCCTCCAGAGCATCTTCCACTTCTGTG...GACAGTTAATTTGCCAACTTGACGTAATCTAGAGTCACCTGCAAAGAGAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | AAACGATTTCTTTACCCCTTCCTGCTACACTACATGAAAGGACCATGCTCTTCAACAGTCCCTCATCCCTaGGTCAATGGATCGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: KRFLYPFLLHYMKGPCSSTVPHP*VNGSMD Trigger: ATCCATCGATCCATTGACCCAGGGATGAGGGACTGT...TGAAGAGCATGGTCCTTTCATGTAGTGTAGCAGGAAGGGGTAAAGAAATCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAACTGAACTTATGCCTTTGTTAGGTAAATACTATAGGGCTGGTCTTAACAAGAGGCTGGAGAGATaGCTAAGCAGGCGAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LETELMPLLGKYYRAGLNKRLER*LSRREH Trigger: GTGCTCTCGCCTGCTTAGCCATCTCTCCAGCCTCTT...GTTAAGACCAGCCCTATAGTATTTACCTAACAAAGGCATAAGTTCAGTTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | GAGACTCTCTTTGCAGGTGACTCTAGATTACGTCAAGTTGGCAAATTAACTGTCCATTTCTGTTTCCTTTaGAGTCCCACACCCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: ETLFAGDSRLRQVGKLTVHFCFL*SPTPQP Trigger: AGGTTGGGGTGTGGGACTGCAAAGGAAACAGAAATG...GACAGTTAATTTGCCAACTTGACGTAATCTAGAGTCACCTGCAAAGAGAGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGATCTCCTGGAACTGGGAGTTATAGATGGCCTTGAGCTACCTGTGGGTACTGATAACAAGTGTCCCTaGAATGTAAAAGGAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: SDLLELGVIDGLELPVGTDNKCP*NVKGNL Trigger: AAGGTTTCCTTTTACATTCCAGGGACACTTGTTATC...AGTACCCACAGGTAGCTCAAGGCCATCTATAACTCCCAGTTCCAGGAGATCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATACACACATGCCTGCCAGTGTTCAGCTGTCTCTACACTAAGGATCTGCCTTGGATCCCTGGAAATTaGAATGGATGTAGACTAAAT | + |
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Preference number: 2 (lower is better) Translates to: QIHTCLPVFSCLYTKDLPWIPGN*NGCRLN Trigger: ATTTAGTCTACATCCATTCCAATTTCCAGGGATCCA...AGGCAGATCCTTAGTGTAGAGACAGCTGAACACTGGCAGGCATGTGTGTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAACTGAACTTATGCCTTTGTTAGGTAAATACTATAGGGCTGGTCTTAACAAGCTCTACCCAGCATaGTATCAGGGGCAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LETELMPLLGKYYRAGLNKLYPA*YQGQRK Trigger: CTTTCTCTGCCCCTGATACCATGCTGGGTAGAGCTT...GTTAAGACCAGCCCTATAGTATTTACCTAACAAAGGCATAAGTTCAGTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | GGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGTACCACATGTCACAACCACAGCAATaGGAATCTGATGTCCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: GLLMWMSVLPACMSVYHMSQPQQ*ESDVLF Trigger: AAAGAGGACATCAGATTCCCATTGCTGTGGTTGTGA...CATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 90 bp | CCAAAGCCTTTTTGTCTTTTAGGATTACTTATGTGGATGAGTGTTTaGCCTGCATGTATGTCTGTGTACCACATGCACGTTTCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: PKPFCLLGLLMWMSV*PACMSVYHMHVSCS Trigger: TGAGCATGAAACGTGCATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGACAAAAAGGCTTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR TCA 90 bp | GGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGTACCACATGATAGATTTTCTAGCTTaGTTCCTGGCCCTTGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: GLLMWMSVLPACMSVYHMIDFLA*FLALEY Trigger: ATACTCAAGGGCCAGGAATCAAGCTAGAAAATCTAT...CATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | TACATGAAAGGACCATGCTCTTCATTTATTCCAGTCCTGAGCAGTTTATTCATTAACAAAAGGGCAATATaGATGGGGATGGCTCGGTCA | + |
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Preference number: 2 (lower is better) Translates to: YMKGPCSSFIPVLSSLFINKRAI*MGMARS Trigger: TGACCGAGCCATCCCCATGCATATTGCCCTTTTGTT...AATGAATAAACTGCTCAGGACTGGAATAAATGAAGAGCATGGTCCTTTCATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | CAACACAATCAAGATAATCCCACACAGACATGCTCACAATGGGTCAGCGAGATCAAAAGATCTGAAGCCTaGCTCTCAAAGCAAAATTTA | + |
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Preference number: 2 (lower is better) Translates to: QHNQDNPTQTCSQWVSEIKRSEA*LSKQNL Trigger: TAAATTTTGCTTTGAGAGGCAGGCTTCAGATCTTTT...GATCTCGCTGACCCATTGTGAGCATGTCTGTGTGGGATTATCTTGATTGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAACTGAACTTATGCCTTTGTTAGGTAAATACTATAGGGCTGGTCTTAACGCTGTATCTGTTACTTaGCTAACTGCCATCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: LETELMPLLGKYYRAGLNAVSVT*LTAIKL Trigger: AAGTTTGATGGCAGTTAGCCAAGTAACAGATACAGC...GTTAAGACCAGCCCTATAGTATTTACCTAACAAAGGCATAAGTTCAGTTTCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR-3UTR GCA 90 bp | TACATGAAAGGACCATGCTCTTCATTTATTCCAGTCCTGAGCAGTTTATTCATTGTAATAGGCAGTTTTTaGAGTAAGAAATCAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: YMKGPCSSFIPVLSSLFIVIGSF*SKKSGA Trigger: AGCTCCTGATTTCTTACTGCAAAAACTGCCTATTAC...AATGAATAAACTGCTCAGGACTGGAATAAATGAAGAGCATGGTCCTTTCATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CCA 72 bp | GGGCACCGCTTCCTGCCCAGCTCAAACTTCAAGATGTaGAGCAGGACCGGCCAGACTCTGCAGCCTCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GHRFLPSSNFKM*SRTGQTLQPQP Trigger: GGGCTGAGGCTGCAGAGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGAGCTGGGCAGGAAGCGGTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | CACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATCTCCTGGATTTGGCTCATCCGTTTaGCCTCCAGAGGACCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HMHVSCSQRPAEGIRSPGFGSSV*PPEDLS Trigger: ACTCAGGTCCTCTGGAGGCAAAACGGATGAGCCAAA...TCCAGGAGATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | CCTGCATGTATGTCTGTGTACCACATGCACGTTTCATaGTCACAGAGGCCAGCAGAGGGCATCAGATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PACMSVYHMHVS*SQRPAEGIRSP Trigger: AGGAGATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTGGTACACAGACATACATGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CCA 72 bp | CCATGGAGCTTCCTTCCACAGAAGTGGAAGATGCTCTaGAGGAAGTGGACTCCTCCTCTAAATGGGTACACC | + |
|
Preference number: 3 (lower is better) Translates to: PWSFLPQKWKML*RKWTPPLNGYT Trigger: GGTGTACCCATTTAGAGGAGGAGTCCACTTCCTCCAGAGCATCTTCCACTTCTGTGGAAGGAAGCTCCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | AAGGGCAATATGCATGGGGATGGCTCGGTCAGTAAGTaGTTGCTCTACAAACACAAGGATCTGAGCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KGNMHGDGSVSK*LLYKHKDLSPD Trigger: GTCTGGGCTCAGATCCTTGTGTTTGTAGAGCAAGCACTTACTGACCGAGCCATCCCCATGCATATTGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | ACTGCAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTaGTTAGGAGGAAGCCTCTTCCTGCAGTCTTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: TAILLGLPSLCY*LGGSLFLQSSR Trigger: TCGGGAAGACTGCAGGAAGAGGCTTCCTCCTAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | CCCTGGTATCCCCATCGCACCAAACCCTTCAAACACTaGAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: PWYPHRTKPFKH*NPSRAAFFVLL Trigger: CAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTTTGGTGCGATGGGGATACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR TCA 72 bp | CACCCTTTGGCTCATCCGTTTTGCCTCCAGAGGACCTaGGTTCAATTCCCAGCATGGTCTAGAAACGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: HPLAHPFCLQRT*VQFPAWSRNDF Trigger: GAAATCGTTTCTAGACCATGCTGGGAATTGAACTCAGGTCCTCTGGAGGCAAAACGGATGAGCCAAAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CCA 72 bp | GCCCTTGGAAAGAACAGTCCCTCATCCCTGGGTCAATaGATCGATGGATCCCTGGAAATTGGAATGGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: ALGKNSPSSLGQ*IDGSLEIGMDV Trigger: TACATCCATTCCAATTTCCAGGGATCCATCGATCCATTGACCCAGGGATGAGGGACTGTTCTTTCCAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CCA 72 bp | AGGAAACAGCCCTTGGAAAGAACAGTCCCTCATCCCTaGGTCAATGGATCGATGGATCCCTGGAAATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RKQPLERTVPHP*VNGSMDPWKLE Trigger: TTCCAATTTCCAGGGATCCATCGATCCATTGACCCAGGGATGAGGGACTGTTCTTTCCAAGGGCTGTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATACACACATGCCTGCCAGTGTTCAGCTGTCTCTACACTAAGGATCTGCCTGTGAGGAAACAGCCCTaGGAAAGAACAGTCCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QIHTCLPVFSCLYTKDLPVRKQP*ERTVPH Trigger: ATGAGGGACTGTTCTTTCCAAGGGCTGTTTCCTCAC...AGGCAGATCCTTAGTGTAGAGACAGCTGAACACTGGCAGGCATGTGTGTATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CCA 72 bp | TCTGCCTGCCCAGAAAATAGTGCCACCCACAGTGGGTaGATCTTCTTACCTCAACACAATCAAGATAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SACPENSATHSG*IFLPQHNQDNP Trigger: GGGATTATCTTGATTGTGTTGAGGTAAGAAGATCCACCCACTGTGGGTGGCACTATTTTCTGGGCAGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | CACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATCTCCTGGATCATTCATTTCATATTaGAGTGCTCTTCTGAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HMHVSCSQRPAEGIRSPGSFISY*SALLRS Trigger: GCTTCTCAGAAGAGCACTCAAATATGAAATGAATGA...TCCAGGAGATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGATTTCTCCATGTAGCCCTGGCTATTCTAGAACTCACTCTGTAGACCAGCTTGATTCCTGGCCCTaGAGTATTTGGCATTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DRISPCSPGYSRTHSVDQLDSWP*SIWHSL Trigger: TAGAGAATGCCAAATACTCAAGGGCCAGGAATCAAG...CTGGTCTACAGAGTGAGTTCTAGAATAGCCAGGGCTACATGGAGAAATCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR TCA 72 bp | ATCAGATCTCCTGGAACTGGGAGTTATAGATGGCCTTaGGCTACCTGTGGGTACTCATACCTGAACCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: IRSPGTGSYRWP*ATCGYSYLNLN Trigger: ATTCAGGTTCAGGTATGAGTACCCACAGGTAGCTCAAGGCCATCTATAACTCCCAGTTCCAGGAGATCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | TTACAAAGGCCATCTATTTCTGAGACAGGCTCTCTCTaGATAGCCCTGAATGTCCTGGAACATAGACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQRPSISETGSL*IALNVLEHRPD Trigger: GTCTGGTCTATGTTCCAGGACATTCAGGGCTATGCAGAGAGAGCCTGTCTCAGAAATAGATGGCCTTTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | TCACAGTCAAGAGCAGAGAACAAATACACACATGCCTaGCAGTGTTCAGCTGTCTCTACACTAAGGATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SQSRAENKYTHA*QCSAVSTLRIC Trigger: GCAGATCCTTAGTGTAGAGACAGCTGAACACTGGCAGGCATGTGTGTATTTGTTCTCTGCTCTTGACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CCA 72 bp | TTCCTTCCACAGAAGTGGAAGATGCTCTGGAGGAAGTaGACTCCTCCTCTAAATGGGTACACCACAGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLPQKWKMLWRK*TPPLNGYTTVK Trigger: TTTAACTGTGGTGTACCCATTTAGAGGAGGAGTCCACTTCCTCCAGAGCATCTTCCACTTCTGTGGAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | TACACTTCTGTAATAGGCAGTTTTTGCAGTAAGAAATCAGGAGCTGAGTATGGTAGCAGGCGAGAGCACTaGTTGCTCTTGCAGAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: YTSVIGSFCSKKSGAEYGSRREH*LLLQRT Trigger: GGTTCTCTGCAAGAGCAACAAGTGCTCTCGCCTGCT...ACCATACTCAGCTCCTGATTTCTTACTGCAAAAACTGCCTATTACAGAAGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGATTTCTCCATGTAGCCCTGGCTATTCTAGAACTCACTCTGTAGACCAGAATCTGATGTCCTCTTaGTGTCTGAGAACAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: DRISPCSPGYSRTHSVDQNLMSS*CLRTVT Trigger: TGTCACTGTTCTCAGACACAAAGAGGACATCAGATT...CTGGTCTACAGAGTGAGTTCTAGAATAGCCAGGGCTACATGGAGAAATCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR TCA 72 bp | TTCCTCAATGAATCCAACTCCCCAGAGTCTATAGAATaGTGCCTTCTGAGTCAGAGGGGAACACACTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLNESNSPESIE*CLLSQRGTHCS Trigger: AGAACAGTGTGTTCCCCTCTGACTCAGAAGGCATCATTCTATAGACTCTGGGGAGTTGGATTCATTGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTTTAGGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGCCATTTCTGTTTCCTTaGCAGTCCCACACCCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: CLLGLLMWMSVLPACMSVPFLFP*QSHTPT Trigger: GGTTGGGGTGTGGGACTGCAAAGGAAACAGAAATGG...CACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACGATTTCTTTACCCCTTCCTGCTACACTACATGAAAGGACCATGCTCTTCAGAGCACTTGTTGCTCTaGCAGAGAACCACATTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KRFLYPFLLHYMKGPCSSEHLLL*QRTTFS Trigger: ACTGAATGTGGTTCTCTGCAAGAGCAACAAGTGCTC...TGAAGAGCATGGTCCTTTCATGTAGTGTAGCAGGAAGGGGTAAAGAAATCGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | CATATCACAGTCAAGAGCAGAGAACAAATACACACATaGCTGCCAGTGTTCAGCTGTCTCTACACTAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HITVKSREQIHT*LPVFSCLYTKD Trigger: ATCCTTAGTGTAGAGACAGCTGAACACTGGCAGGCATGTGTGTATTTGTTCTCTGCTCTTGACTGTGATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | TGGAATGGATGTAGACTAAATACTTACTGTCTAGCATaGCAAGGGAGTACACTTAAACCTGGTAACAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WNGCRLNTYCLA*QGSTLKPGNSS Trigger: GGAGCTGTTACCAGGTTTAAGTGTACTCCCTTGGCATGCTAGACAGTAAGTATTTAGTCTACATCCATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | GGTGTGTACCACTACACTTCTGTAATAGGCAGTTTTTaGAGTAAGAAATCAGGAGCTGAGTATGGTGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GVYHYTSVIGSF*SKKSGAEYGGT Trigger: TGTACCACCATACTCAGCTCCTGATTTCTTACTGCAAAAACTGCCTATTACAGAAGTGTAGTGGTACACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | CTTTACCCCTTCCTGCTACACTACATGAAAGGACCATaGTCTTCATTTATTCCAGTCCTGAGCAGTTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: LYPFLLHYMKGP*SSFIPVLSSLF Trigger: GAATAAACTGCTCAGGACTGGAATAAATGAAGAGCATGGTCCTTTCATGTAGTGTAGCAGGAAGGGGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR TCA 72 bp | ATCCACTCTGTAGGAAACTGTATAGATTTTCTAGCTTaGTTCCTGGCCCTTGAGTATTTGGCATTCTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: IHSVGNCIDFLA*FLALEYLAFSR Trigger: CCTAGAGAATGCCAAATACTCAAGGGCCAGGAATCAAGCTAGAAAATCTATACAGTTTCCTACAGAGTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR TCA 72 bp | AGTCTCTTTCTTTATCTACCTTCCCTCAGTAGAACTTaGAGTCTTGTAACACCCTTTGGCTCATCCGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLFLYLPSLSRT*SLVTPFGSSVL Trigger: CAAAACGGATGAGCCAAAGGGTGTTACAAGACTTCAAGTTCTACTGAGGGAAGGTAGATAAAGAAAGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CCA 72 bp | ATCTATAATCGTGTCCCTGAAGATAACAAGTGTCCCTaGAATGTAAAAGGAAACCTTGAGAGAAATGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: IYNRVPEDNKCP*NVKGNLERNGT Trigger: GGTGCCATTTCTCTCAAGGTTTCCTTTTACATTCCAGGGACACTTGTTATCTTCAGGGACACGATTATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAATTTCAACTTCAAGAATACAACAAAAGAGGCTGGAGAGATGGCTAAGCAGGCTGCATGGACACTGCTaGACTATGATATACTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: GISTSRIQQKRLERWLSRLHGHC*TMIYLH Trigger: ATGTAAGTATATCATAGTCAAGCAGTGTCCATGCAG...CCTGCTTAGCCATCTCTCCAGCCTCTTTTGTTGTATTCTTGAAGTTGAAATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR GCA 72 bp | TCTTTTAGGATTACTTATGTGGATGAGTGTTTTGCCTaGATGTATGTCTGTGTACCACATGCACGTTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SFRITYVDECFA*MYVCVPHARFM Trigger: CATGAAACGTGCATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CCA 72 bp | TCAGTTCCAGAGGATTGGTCACCCTTTTTACCTGCATaGACACTGCTTGACTATGATATACTTACATACATA | + |
|
Preference number: 3 (lower is better) Translates to: SVPEDWSPFLPA*TLLDYDILTYI Trigger: TATGTATGTAAGTATATCATAGTCAAGCAGTGTCCATGCAGGTAAAAAGGGTGACCAATCCTCTGGAACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR TCA 72 bp | TCTCTCCTGTTACATGATAGTTCCTTTGATAGGAAGTaGATGCCAAGTTCTCTACCAAAGCCTTTTTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLLHDSSFDRK*MPSSLPKPFCL Trigger: AAGACAAAAAGGCTTTGGTAGAGAACTTGGCATTCACTTCCTATCAAAGGAACTATCATGTAACAGGAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCTCAAACTTCAAGATGTGGAGCAGGACCGGCCAGACTCTGCAGCCTCAGCCACCACCTTCTCCTaGGTGTGGCTGCGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQLKLQDVEQDRPDSAASATTFS*VWLRRC Trigger: ACACCTCCGCAGCCACACCCAGGAGAAGGTGGTGGC...TGAGGCTGCAGAGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGAGCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCTCAAACTTCAAGATGTGGAGCAGGACCGGCCAGACTCTGCAGCCTCACACAGGCACAGGAAATaGTCAGGGGTGTCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AQLKLQDVEQDRPDSAASHRHRK*SGVSGM Trigger: CATCCCTGACACCCCTGACCATTTCCTGTGCCTGTG...TGAGGCTGCAGAGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGAGCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGTACCACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATGGGCTGAGGTCAGCCTaGCTTTGTAAGGCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCTTCTFHAHRGQQRASDGLRSA*LCKACS Trigger: GCTGCAAGCCTTACAAAGCCAGGCTGACCTCAGCCC...ATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTGGTACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCTCAAACTTCAAGATGTGGAGCAGGACCGGCCAGACTCTGCAGCCTCAAGAACTTGGTGTTGTTaGCAAACATGCCCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQLKLQDVEQDRPDSAASRTWCC*QTCPHR Trigger: CCTGTGGGGGCATGTTTGCCAACAACACCAAGTTCT...TGAGGCTGCAGAGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGAGCTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATCTCCTGGAACTGGGAGTTATAGATGGCCTTGAGCTACCTGTGGGTACTTGGCGGGGGCTCTCCTaGGCCTTCAGACAGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: SDLLELGVIDGLELPVGTWRGLS*AFRQYT Trigger: TGTGTACTGTCTGAAGGCCCAGGAGAGCCCCCGCCA...AGTACCCACAGGTAGCTCAAGGCCATCTATAACTCCCAGTTCCAGGAGATCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CAA 72 bp | GGGTCACTTCCTGACCTACCTCCATTTCTGTTTCCTTaGCAGTCCCACACCCCAACCTACCACAGAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSLPDLPPFLFP*QSHTPTYHRGT Trigger: TGTGCCTCTGTGGTAGGTTGGGGTGTGGGACTGCAAAGGAAACAGAAATGGAGGTAGGTCAGGAAGTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGGTCCTCAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCACAGTCATGCACTTTGCGGTaGTGGGACTTGACAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGPQFNSQQPHGGSQPQSCTLR*WDLTEL Trigger: CAGCTCTGTCAAGTCCCATCACCGCAAAGTGCATGA...CTGTGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTGAGGACCTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | GCCCAGCTCAAACTTCAAGATGTGGAGCAGGACCGGCCAGACTCTGCAGCCTCATTTGTACCTTGGCTCTaGGTCTCCTTCATGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQLKLQDVEQDRPDSAASFVPWL*VSFMHF Trigger: AAAGTGCATGAAGGAGACTCAGAGCCAAGGTACAAA...TGAGGCTGCAGAGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGAGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGTACCACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATGTTGTCCTGAGAAGCTaGGAGAGCTGTTCCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCTTCTFHAHRGQQRASDVVLRS*ESCSLN Trigger: GTTGAGGGAACAGCTCTCTCAGCTTCTCAGGACAAC...ATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTGGTACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTCTCTCTGCATAGCCCTGAATGTCCTGGAACATAGACCAGACTTGCCTGAGCTGGGGTTGTCCTaGGAAGCTGAGAGAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSLCIALNVLEHRPDLPELGLS*EAERAV Trigger: AACAGCTCTCTCAGCTTCTCAGGACAACCCCAGCTC...AGGCAAGTCTGGTCTATGTTCCAGGACATTCAGGGCTATGCAGAGAGAGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGTACCACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATGGCCACTTGAACTGGTaGTTCTTGCGAAGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCTTCTFHAHRGQQRASDGHLNW*FLRRCT Trigger: TGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCC...ATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTGGTACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR GCA 90 bp | CACATGCACGTTTCATGCTCACAGAGGCCAGCAGAGGGCATCAGATCTCCTGGACCTTCTTGTAACTGCTaGAGCAACTGCTGTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HMHVSCSQRPAEGIRSPGPSCNC*SNCCVS Trigger: GCTGACACAGCAGTTGCTGCAGCAGTTACAAGAAGG...TCCAGGAGATCTGATGCCCTCTGCTGGCCTCTGTGAGCATGAAACGTGCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | GGAATTTCAACTTCAAGAATACAACAAAAGAGGCTGGAGAGATGGCTAAGCAGGGAGGGTTTCGGAGACTaGCGGGGGCTCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GISTSRIQQKRLERWLSREGFGD*RGLSWA Trigger: GGCCCAGGAGAGCCCCCGCCAGTCTCCGAAACCCTC...CCTGCTTAGCCATCTCTCCAGCCTCTTTTGTTGTATTCTTGAAGTTGAAATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CAA 72 bp | GGCAATATGCATGGGGATGGCTCGGTCAGTAAGTGCTaGCTCTACAAACACAAGGATCTGAGCCCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: GNMHGDGSVSKC*LYKHKDLSPDT Trigger: GGTGTCTGGGCTCAGATCCTTGTGTTTGTAGAGCAAGCACTTACTGACCGAGCCATCCCCATGCATATTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCAGAGGTCCTCAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCAGAGGGAAGAAGGCAGTaGGCAGGTCATGTCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSRGPQFNSQQPHGGSQPEGRRQ*AGHVTQ Trigger: TTGTGTGACATGACCTGCCCACTGCCTTCTTCCCTC...TGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTGAGGACCTCTGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCTCAAACTTCAAGATGTGGAGCAGGACCGGCCAGACTCTGCAGCCTCATGTGATCTAAGAACTTaGTGTTGTTGGCAAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: AQLKLQDVEQDRPDSAASCDLRT*CCWQTC Trigger: GCATGTTTGCCAACAACACCAAGTTCTTAGATCACA...TGAGGCTGCAGAGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGAGCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 72 bp | AAGAGGCTGGAGAGATGGCTAAGCAGGCGAGAGCACTaGTTGCTCTTGCAGAGAACCACATTCAGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLERWLSRREH*LLLQRTTFSFQ Trigger: CTGGAAACTGAATGTGGTTCTCTGCAAGAGCAACAAGTGCTCTCGCCTGCTTAGCCATCTCTCCAGCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 72 bp | TGCATAGCCCTGAATGTCCTGGAACATAGACCAGACTaGCCTCCAATTCAAGGGATCTGCTGGACTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CIALNVLEHRPD*PPIQGICWTLL Trigger: CAGGAGAGTCCAGCAGATCCCTTGAATTGGAGGCAAGTCTGGTCTATGTTCCAGGACATTCAGGGCTATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | TCTTTAACTTCAGTTCCAGAGGATTGGTCACCCTTTTTACCTGCATGGACACTGATGACGTTCCGGCTCTaGAAGTCCAGGATGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTSVPEDWSPFLPAWTLMTFRL*KSRMQG Trigger: CCCCTGCATCCTGGACTTTCAGAGCCGGAACGTCAT...CAGTGTCCATGCAGGTAAAAAGGGTGACCAATCCTCTGGAACTGAAGTTAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | GACAGGATTTCTCCATGTAGCCCTGGCTATTCTAGAACTCACTCTGTAGACCAGGCTTACACCGGTCCTTaGAGGTACAGGTACAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRISPCSPGYSRTHSVDQAYTGP*RYRYSL Trigger: AAGGCTGTACCTGTACCTTCAAGGACCGGTGTAAGC...CTGGTCTACAGAGTGAGTTCTAGAATAGCCAGGGCTACATGGAGAAATCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAGAACAGCAAGTGCTCTTAACCACTGTGTCACCTCTCCAGTCCACACATGTCTGGCGACGGATGTaGTCTAAGAACTTGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEEQQVLLTTVSPLQSTHVWRRM*SKNLVL Trigger: CAACACCAAGTTCTTAGATCACATCCGTCGCCAGAC...ATGTGTGGACTGGAGAGGTGACACAGTGGTTAAGAGCACTTGCTGTTCTTCCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | ACAGGCTCTCTCTGCATAGCCCTGAATGTCCTGGAACATAGACCAGACTTGCCTGGTTGTTGCCACGTGTaGAGCATTTGTCACAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSLCIALNVLEHRPDLPGCCHV*SICHRH Trigger: ATGTCTGTGACAAATGCTTCACACGTGGCAACAACC...AGGCAAGTCTGGTCTATGTTCCAGGACATTCAGGGCTATGCAGAGAGAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | CAAATACACACATGCCTGCCAGTGTTCAGCTGTCTCTACACTAAGGATCTGCCTCTTTTCCATCTCTCTTaGGGGTTTCGGAGACTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QIHTCLPVFSCLYTKDLPLFHLS*GFRRLA Trigger: CGCCAGTCTCCGAAACCCTCAAGAGAGATGGAAAAG...AGGCAGATCCTTAGTGTAGAGACAGCTGAACACTGGCAGGCATGTGTGTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CCA 90 bp | CAACACAATCAAGATAATCCCACACAGACATGCTCACAATGGGTCAGCGAGATCCGAAGAACTCCTCCATaGCCGAGCACACAAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHNQDNPTQTCSQWVSEIRRTPP*PSTQRS Trigger: GCTCCTTTGTGTGCTCGGCCATGGAGGAGTTCTTCG...GATCTCGCTGACCCATTGTGAGCATGTCTGTGTGGGATTATCTTGATTGTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| 3UTR CAA 72 bp | CCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTaGTGTTACTGCTTAGGAGGAAGCCTCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSNTAILLGLPS*CYCLGGSLFLQ Trigger: CTGCAGGAAGAGGCTTCCTCCTAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | AAACGATTTCTTTACCCCTTCCTGCTACACTACATGAAAGGACCATGCTCTTCACAGGGGTGTCAGGGATaGCGTTCCGGCTCTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRFLYPFLLHYMKGPCSSQGCQG*RSGSES Trigger: ACTTTCAGAGCCGGAACGTCATCCCTGACACCCCTG...TGAAGAGCATGGTCCTTTCATGTAGTGTAGCAGGAAGGGGTAAAGAAATCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | GAGACTCTCTTTGCAGGTGACTCTAGATTACGTCAAGTTGGCAAATTAACTGTCTCGCTGCTGATCCAATaGGGTCTGGCGACGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETLFAGDSRLRQVGKLTVSLLIQ*GLATDV Trigger: CACATCCGTCGCCAGACCTCATTGGATCAGCAGCGA...GACAGTTAATTTGCCAACTTGACGTAATCTAGAGTCACCTGCAAAGAGAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | CTTGACACATATCACAGTCAAGAGCAGAGAACAAATACACACATGCCTGCCAGTGTCCTGAGGGCCACTTaGACTGGTGCTTCTTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDTYHSQEQRTNTHMPASVLRAT*TGASCE Trigger: TTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGAC...ACTGGCAGGCATGTGTGTATTTGTTCTCTGCTCTTGACTGTGATATGTGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR TCA 90 bp | AAACGATTTCTTTACCCCTTCCTGCTACACTACATGAAAGGACCATGCTCTTCAAAAGCGAGGGTGTCCTaGGGGCCACTTGAACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRFLYPFLLHYMKGPCSSKARVS*GPLELV Trigger: CACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTT...TGAAGAGCATGGTCCTTTCATGTAGTGTAGCAGGAAGGGGTAAAGAAATCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR GCA 90 bp | GAACAAATACACACATGCCTGCCAGTGTTCAGCTGTCTCTACACTAAGGATCTGTCTTCCTTAGAGCCATaGATGTGCTGCTGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQIHTCLPVFSCLYTKDLSSLEP*MCCCRC Trigger: GCACCTGCAGCAGCACATGCATGGCTCTAAGGAAGA...CAGATCCTTAGTGTAGAGACAGCTGAACACTGGCAGGCATGTGTGTATTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR GCA 90 bp | CTTGACACATATCACAGTCAAGAGCAGAGAACAAATACACACATGCCTGCCAGTTGTTGTTGGCAAACATaGCCCCACAGGTGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDTYHSQEQRTNTHMPASCCWQT*PHRWDR Trigger: CCTGTCCCACCTGTGGGGGCATGTTTGCCAACAACA...ACTGGCAGGCATGTGTGTATTTGTTCTCTGCTCTTGACTGTGATATGTGTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR GCA 90 bp | CAACACAATCAAGATAATCCCACACAGACATGCTCACAATGGGTCAGCGAGATCTGTAGGCTGACTCCTTaGTGTGGGTGTCTAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHNQDNPTQTCSQWVSEICRLTP*CGCLGA Trigger: AGCACCTAGACACCCACAGCAAGGAGTCAGCCTACA...GATCTCGCTGACCCATTGTGAGCATGTCTGTGTGGGATTATCTTGATTGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGATTTCTCCATGTAGCCCTGGCTATTCTAGAACTCACTCTGTAGACCAGCTGTTTCCAGAACAATaGCCTGCAGGCTGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRISPCSPGYSRTHSVDQLFPEQ*PAGCSH Trigger: ATGAGAGCAGCCTGCAGGGCATTGTTCTGGAAACAG...CTGGTCTACAGAGTGAGTTCTAGAATAGCCAGGGCTACATGGAGAAATCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CCA 90 bp | CTGGAAGAACAGCAAGTGCTCTTAACCACTGTGTCACCTCTCCAGTCCACACATAATCTCTTGGAACAGTaGGAACACTGGAATCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEEQQVLLTTVSPLQSTHNLLEQ*EHWNRC Trigger: GCAGCGATTCCAGTGTTCCCACTGTTCCAAGAGATT...ATGTGTGGACTGGAGAGGTGACACAGTGGTTAAGAGCACTTGCTGTTCTTCCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATCTCCTGGAACTGGGAGTTATAGATGGCCTTGAGCTACCTGTGGGTACTGCAAGAGCCTCTCTGTaGCAAATCTCTTGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLLELGVIDGLELPVGTARASL*QISWNS Trigger: ACTGTTCCAAGAGATTTGCCACAGAGAGGCTCTTGC...AGTACCCACAGGTAGCTCAAGGCCATCTATAACTCCCAGTTCCAGGAGATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | GGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGTACCACATGTGCTGCTGCAGGTGCTaGGTGACATGGTCGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLMWMSVLPACMSVYHMCCCRC*VTWSKN Trigger: GTTCTTCGACCATGTCACTCAGCACCTGCAGCAGCA...CATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | GGAATTTCAACTTCAAGAATACAACAAAAGAGGCTGGAGAGATGGCTAAGCAGGAGTAGACATGGCGGATaGGGTCGGCAGAACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GISTSRIQQKRLERWLSRSRHGG*GRQNCP Trigger: TGGACAGTTCTGCCGACCTCATCCGCCATGTCTACT...CCTGCTTAGCCATCTCTCCAGCCTCTTTTGTTGTATTCTTGAAGTTGAAATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | AACCCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTGCTTAGACCATATGAATGGCTaGGCTGGGGTTGTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPSNTAILLGLPSLCYCLDHMNG*AGVVLR Trigger: TCTCAGGACAACCCCAGCTCAGCCATTCATATGGTC...TAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR GCA 90 bp | CTGGAAACTGAACTTATGCCTTTGTTAGGTAAATACTATAGGGCTGGTCTTAACTCTCCTGGGTGTGGCTaGGGAGGTGTTCTCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LETELMPLLGKYYRAGLNSPGCG*GGVLEA Trigger: AGCTTCGAGAACACCTCCGCAGCCACACCCAGGAGA...GTTAAGACCAGCCCTATAGTATTTACCTAACAAAGGCATAAGTTCAGTTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTTTAGGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGACCTTCTCCTGGGTGTaGCTGCGGAGGTGTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CLLGLLMWMSVLPACMSVTFSWV*LRRCSR Trigger: TCGAGAACACCTCCGCAGCCACACCCAGGAGAAGGT...CACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAACTGAACTTATGCCTTTGTTAGGTAAATACTATAGGGCTGGTCTTAACTGTCGAAAGCGCATGTaGTTCCGGAGGGAAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LETELMPLLGKYYRAGLNCRKRM*FRREEG Trigger: GCCTTCTTCCCTCCGGAATCACATGCGCTTTCGACA...GTTAAGACCAGCCCTATAGTATTTACCTAACAAAGGCATAAGTTCAGTTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTTTAGGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGGAGGGCCACTTGAACTaGTGCTTCTTGCGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLGLLMWMSVLPACMSVEGHLN*CFLRRC Trigger: GCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTC...CACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CCA 90 bp | GAGACTCTCTTTGCAGGTGACTCTAGATTACGTCAAGTTGGCAAATTAACTGTCTATGAATGGCTGAGCTaGGGTTGTCCTGAGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETLFAGDSRLRQVGKLTVYEWLS*GCPEKL Trigger: CAGCTTCTCAGGACAACCCCAGCTCAGCCATTCATA...GACAGTTAATTTGCCAACTTGACGTAATCTAGAGTCACCTGCAAAGAGAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 72 bp | CAGCGAGATCTAGACAGTCCCTCAATGAGACTCTCTTaGCAGGTGACTCTAGATTACGTCAAGTTGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRDLDSPSMRLS*QVTLDYVKLAN Trigger: ATTTGCCAACTTGACGTAATCTAGAGTCACCTGCAAAGAGAGTCTCATTGAGGGACTGTCTAGATCTCGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR GCA 90 bp | TCTTTAACTTCAGTTCCAGAGGATTGGTCACCCTTTTTACCTGCATGGACACTGCAAAAGCCACATTCCTaGCACAAGCAGGAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSVPEDWSPFLPAWTLQKPHS*HKQENS Trigger: AGAATTCTCCTGCTTGTGGCAGGAATGTGGCTTTTG...CAGTGTCCATGCAGGTAAAAAGGGTGACCAATCCTCTGGAACTGAAGTTAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR GCA 90 bp | TGTCTTTTAGGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGCAATGCCCTGCAGGCTaGTCTCATTCAGTGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: CLLGLLMWMSVLPACMSVQCPAG*SHSVPI Trigger: GATTGGCACTGAATGAGAGCAGCCTGCAGGGCATTG...CACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CCA 90 bp | AACCCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTGCTTAGAATTCTTCCTCAAGTaGGTCCTCTTCCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NPSNTAILLGLPSLCYCLEFFLK*VLFLFF Trigger: GAAGAAGAGGAAGAGGACCCACTTGAGGAAGAATTC...TAAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 72 bp | TTCTTTTTAGCAAAGCTGGGAAGGAAAGCCAGGGCCTaGTTTACAAAGCACAAGACAGAAGACCCAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FFLAKLGRKARA*FTKHKTEDPSQ Trigger: TTGACTTGGGTCTTCTGTCTTGTGCTTTGTAAACAAGGCCCTGGCTTTCCTTCCCAGCTTTGCTAAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR GCA 90 bp | TGTCTTTTAGGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGTGGCTTTGTAAGGCTTaGAGCCCCCACTGTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLGLLMWMSVLPACMSVWLCKA*SPHCFS Trigger: GCTAAAACAGTGGGGGCTGCAAGCCTTACAAAGCCA...CACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR GCA 90 bp | TACACTTCTGTAATAGGCAGTTTTTGCAGTAAGAAATCAGGAGCTGAGTATGGTTGCTTCTTGCGAAGGTaGACAGTGAGGTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YTSVIGSFCSKKSGAEYGCFLRR*TVRLLP Trigger: TGGCAACAACCTCACTGTGCACCTTCGCAAGAAGCA...ACCATACTCAGCTCCTGATTTCTTACTGCAAAAACTGCCTATTACAGAAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CCA 90 bp | CTGGAAACTGAACTTATGCCTTTGTTAGGTAAATACTATAGGGCTGGTCTTAACCCCACTGTTTTAGCTTaGTGTGGTAGCAGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LETELMPLLGKYYRAGLNPTVLA*CGSSGS Trigger: ACTTCCACTGCTACCACACCAAGCTAAAACAGTGGG...GTTAAGACCAGCCCTATAGTATTTACCTAACAAAGGCATAAGTTCAGTTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| 3UTR CAA 72 bp | TTTTGTCTTTTAGGATTACTTATGTGGATGAGTGTTTaGCCTGCATGTATGTCTGTGTACCACATGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLGLLMWMSV*PACMSVYHMHV Trigger: AACGTGCATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCCTAAAAGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS CCA 90 bp | TTGGCAAACATGCCCCCACAGGTGGGACAGGCCACCACCTTCTCCTaGGTGTGGCTGCGGAGGTGTTCTCGAAGCTTACACCGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LANMPPQVGQATTFS*VWLRRCSRSLHRSL Trigger: CAAGGACCGGTGTAAGCTTCGAGAACACCTCCGCAGCCACACCCAGGAGAAGGTGGTGGCCTGTCCCACCTGTGGGGGCATGTTTGCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS TCA 90 bp | AGGCACAGGAAATGGTCAGGGGTGTCAGGGATGACGTTCCGGCTCTaGAAGTCCAGGATGCAGGGGCTGAGGTCAGCCTGGCTTTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHRKWSGVSGMTFRL*KSRMQGLRSAWLCK Trigger: CTTACAAAGCCAGGCTGACCTCAGCCCCTGCATCCTGGACTTTCAGAGCCGGAACGTCATCCCTGACACCCCTGACCATTTCCTGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS GCA 90 bp | TCTGGCGACGGATGTGATCTAAGAACTTGGTGTTGTTGGCAAACATaGCCCCACAGGTGGGACAGGCCACCACCTTCTCCTGGGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGDGCDLRTWCCWQT*PHRWDRPPPSPGCG Trigger: GCCACACCCAGGAGAAGGTGGTGGCCTGTCCCACCTGTGGGGGCATGTTTGCCAACAACACCAAGTTCTTAGATCACATCCGTCGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGCTCAAACTTCAAGATGTGGAGCAGGACCGGCCAGACTCTGCAGCCTCAGCTTTTCCATCTCTCTaGAGGGTTTCGGAGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQLKLQDVEQDRPDSAASAFPSL*RVSETG Trigger: GCCAGTCTCCGAAACCCTCAAGAGAGATGGAAAAGC...TGAGGCTGCAGAGTCTGGCCGGTCCTGCTCCACATCTTGAAGTTTGAGCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS TCA 90 bp | AGGTACAGCCTTTCCAGCCACACTGCACCACATGGTTGTCCTTGCTaGCAGCTTGGTATTCACAGCACAGGCTGTGCGCATCCACATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RYSLSSHTAPHGCPC*QLGIHSTGCAHPHA Trigger: GGCATGTGGATGCGCACAGCCTGTGCTGTGAATACCAAGCTGTCAGCAAGGACAACCATGTGGTGCAGTGTGGCTGGAAAGGCTGTACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS GCA 90 bp | TCCTTGTACCGAAAGCGAGGGTGTCCTGAGGGCCACTTGAACTGGTaGTTCTTGCGAAGGTGCACAGTGAGGTTGTTGCCACGTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLYRKRGCPEGHLNW*FLRRCTVRLLPRVK Trigger: CTTCACACGTGGCAACAACCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTACAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS CCA 90 bp | CCAATGAGGTCTGGCGACGGATGTGATCTAAGAACTTGGTGTTGTTaGCAAACATGCCCCCACAGGTGGGACAGGCCACCACCTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PMRSGDGCDLRTWCC*QTCPHRWDRPPPSP Trigger: AGGAGAAGGTGGTGGCCTGTCCCACCTGTGGGGGCATGTTTGCCAACAACACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS CCA 90 bp | GCTGCTGATCCAATGAGGTCTGGCGACGGATGTGATCTAAGAACTTaGTGTTGTTGGCAAACATGCCCCCACAGGTGGGACAGGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: AADPMRSGDGCDLRT*CCWQTCPHRWDRPP Trigger: TGGTGGCCTGTCCCACCTGTGGGGGCATGTTTGCCAACAACACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGGATCAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS CCA 90 bp | TGTTCCTTGTACCGAAAGCGAGGGTGTCCTGAGGGCCACTTGAACTaGTGCTTCTTGCGAAGGTGCACAGTGAGGTTGTTGCCACGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSLYRKRGCPEGHLN*CFLRRCTVRLLPRV Trigger: CACACGTGGCAACAACCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTACAAGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS CCA 90 bp | TTTTCCATCTCTCTTGAGGGTTTCGGAGACTGGCGGGGGCTCTCCTaGGCCTTCAGACAGTACACAGTAGACAATGTCTCGCTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSISLEGFGDWRGLS*AFRQYTVDNVSLAL Trigger: CAAGGCCAGCGAGACATTGTCTACTGTGTACTGTCTGAAGGCCCAGGAGAGCCCCCGCCAGTCTCCGAAACCCTCAAGAGAGATGGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS TCA 90 bp | TCTTCCTCTTCTTCCTTAGAGCCATGCATGTGCTGCTGCAGGTGCTaGGTGACATGGTCGAAGAACTCCTCCATGGCCGAGCACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSLEPCMCCCRC*VTWSKNSSMAEHTK Trigger: CTTTGTGTGCTCGGCCATGGAGGAGTTCTTCGACCATGTCACTCAGCACCTGCAGCAGCACATGCATGGCTCTAAGGAAGAAGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034629.6 ENSMUST00000214660.2 ENSMUST00000216508.2 |
||
| CDS GCA 90 bp | CGGATGAGGTCGGCAGAACTGTCCAGAGAGCAAAAGCCACATTCCTaGCACAAGCAGGAGAATTCTTCCTCAAGTGGGTCCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RMRSAELSREQKPHS*HKQENSSSSGSSSS Trigger: AGAGGAAGAGGACCCACTTGAGGAAGAATTCTCCTGCTTGTGGCAGGAATGTGGCTTTTGCTCTCTGGACAGTTCTGCCGACCTCATCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034629.6 ENSMUST00000214660.2 ENSMUST00000216508.2 |
||
| CDS GCA 90 bp | AGTGCCAATCCCGGATCTGATCCTTCTTGTAACTGCTGCAGCAACTaGTGTGTCAGCTCCACACTCTCATACCGAACTAGCTGCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SANPGSDPSCNCCSN*CVSSTLSYRTSCSR Trigger: GCGACTGCAGCTAGTTCGGTATGAGAGTGTGGAGCTGACACAGCAGTTGCTGCAGCAGTTACAAGAAGGATCAGATCCGGGATTGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS TCA 90 bp | ACTGTTTTAGCTTGGTGTGGTAGCAGTGGAAGTAGACATGGCGGATaGGGTCGGCAGAACTGTCCAGAGAGCAAAAGCCACATTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TVLAWCGSSGSRHGG*GRQNCPESKSHIPA Trigger: GGCAGGAATGTGGCTTTTGCTCTCTGGACAGTTCTGCCGACCTCATCCGCCATGTCTACTTCCACTGCTACCACACCAAGCTAAAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034629.6 ENSMUST00000214660.2 ENSMUST00000216508.2 |
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| CDS TCA 90 bp | GTACACAGTAGACAATGTCTCGCTGGCCTTGGGTGTCTGTCTGACTaGCCATATGAATGGCTGAGCTGGGGTTGTCCTGAGAAGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHSRQCLAGLGCLSD*PYEWLSWGCPEKLR Trigger: TCTCAGCTTCTCAGGACAACCCCAGCTCAGCCATTCATATGGTCAGTCAGACAGACACCCAAGGCCAGCGAGACATTGTCTACTGTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS TCA 90 bp | GTCTCCTTCATGCACTTTGCGGTGATGGGACTTGACAGAGCTGAGTaGCCTCGCACTGAAATTGCAGTTCTCAAAGTCACACCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSFMHFAVMGLDRAE*PRTEIAVLKVTPVG Trigger: GCCTACAGGTGTGACTTTGAGAACTGCAATTTCAGTGCGAGGTCACTCAGCTCTGTCAAGTCCCATCACCGCAAAGTGCATGAAGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS GCA 90 bp | CTCTCATTCAGTGCCAATCCCGGATCTGATCCTTCTTGTAACTGCTaGAGCAACTGCTGTGTCAGCTCCACACTCTCATACCGAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSFSANPGSDPSCNC*SNCCVSSTLSYRTS Trigger: GCTAGTTCGGTATGAGAGTGTGGAGCTGACACAGCAGTTGCTGCAGCAGTTACAAGAAGGATCAGATCCGGGATTGGCACTGAATGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS GCA 90 bp | CTGCTCTCATTCAGTGCCAATCCCGGATCTGATCCTTCTTGTAACTaGTGCAGCAACTGCTGTGTCAGCTCCACACTCTCATACCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LLSFSANPGSDPSCN*CSNCCVSSTLSYRT Trigger: AGTTCGGTATGAGAGTGTGGAGCTGACACAGCAGTTGCTGCAGCAGTTACAAGAAGGATCAGATCCGGGATTGGCACTGAATGAGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS CCA 90 bp | AGTGATTCACATGGTTCCGCATGTGGTCACGCAAGAGCCTCTCTGTaGCAAATCTCTTGGAACAGTGGGAACACTGGAATCGCTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SDSHGSACGHARASL*QISWNSGNTGIAAD Trigger: ATCAGCAGCGATTCCAGTGTTCCCACTGTTCCAAGAGATTTGCCACAGAGAGGCTCTTGCGTGACCACATGCGGAACCATGTGAATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGATTTCTCCATGTAGCCCTGGCTATTCTAGAACTCACTCTGTAGACCAGAGGTGCACAGTGAGGTaGTTGCCACGTGTGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DRISPCSPGYSRTHSVDQRCTVR*LPRVKH Trigger: ATGCTTCACACGTGGCAACAACCTCACTGTGCACCT...CTGGTCTACAGAGTGAGTTCTAGAATAGCCAGGGCTACATGGAGAAATCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS TCA 90 bp | TGCACAGTGAGGTTGTTGCCACGTGTGAAGCATTTGTCACAGACATaGCATTTGTACCTTGGCTCTGAGTCTCCTTCATGCACTTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CTVRLLPRVKHLSQT*HLYLGSESPSCTLR Trigger: CCGCAAAGTGCATGAAGGAGACTCAGAGCCAAGGTACAAATGTCATGTCTGTGACAAATGCTTCACACGTGGCAACAACCTCACTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | CAACACAATCAAGATAATCCCACACAGACATGCTCACAATGGGTCAGCGAGATCTTGAACTGGTGCTTCTaGCGAAGGTGCACAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHNQDNPTQTCSQWVSEILNWCF*RRCTVR Trigger: CCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAA...GATCTCGCTGACCCATTGTGAGCATGTCTGTGTGGGATTATCTTGATTGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | CTTGACACATATCACAGTCAAGAGCAGAGAACAAATACACACATGCCTGCCAGTTGTCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LDTYHSQEQRTNTHMPASCPEGH*NWCFLR Trigger: TCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACA...ACTGGCAGGCATGTGTGTATTTGTTCTCTGCTCTTGACTGTGATATGTGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGATTTCTCCATGTAGCCCTGGCTATTCTAGAACTCACTCTGTAGACCAGCCATCTTCATGTTCCTaGTACCGAAAGCGAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DRISPCSPGYSRTHSVDQPSSCS*YRKRGC Trigger: ACACCCTCGCTTTCGGTACAAGGAACATGAAGATGG...CTGGTCTACAGAGTGAGTTCTAGAATAGCCAGGGCTACATGGAGAAATCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | GAGACTCTCTTTGCAGGTGACTCTAGATTACGTCAAGTTGGCAAATTAACTGTCAATGTCTCGCTGGCCTaGGGTGTCTGTCTGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ETLFAGDSRLRQVGKLTVNVSLA*GVCLTD Trigger: GTCAGTCAGACAGACACCCAAGGCCAGCGAGACATT...GACAGTTAATTTGCCAACTTGACGTAATCTAGAGTCACCTGCAAAGAGAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | GGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGTACCACATGAGCTTACACCGGTCCTaGAAGGTACAGGTACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLLMWMSVLPACMSVYHMSLHRS*KVQVQP Trigger: AGGCTGTACCTGTACCTTCAAGGACCGGTGTAAGCT...CATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | AAACCCTTCAAACACTGCAATCCTTCTAGGGCTGCCTTCTTTGTGTTACTGCTTAAGAACTTGGTGTTGTaGGCAAACATGCCCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KPFKHCNPSRAAFFVLLLKNLVL*ANMPPQ Trigger: CTGTGGGGGCATGTTTGCCAACAACACCAAGTTCTT...AAGCAGTAACACAAAGAAGGCAGCCCTAGAAGGATTGCAGTGTTTGAAGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | GGATTACTTATGTGGATGAGTGTTTTGCCTGCATGTATGTCTGTGTACCACATGTCTGTGGCAAATCTCTaGGAACAGTGGGAACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLLMWMSVLPACMSVYHMSVANL*EQWEHW Trigger: CCAGTGTTCCCACTGTTCCAAGAGATTTGCCACAGA...CATGTGGTACACAGACATACATGCAGGCAAAACACTCATCCACATAAGTAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | AAACGATTTCTTTACCCCTTCCTGCTACACTACATGAAAGGACCATGCTCTTCATGCACAGTGAGGTTGTaGCCACGTGTGAAGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRFLYPFLLHYMKGPCSSCTVRL*PRVKHL Trigger: CAAATGCTTCACACGTGGCAACAACCTCACTGTGCA...TGAAGAGCATGGTCCTTTCATGTAGTGTAGCAGGAAGGGGTAAAGAAATCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACTGAACTTATGCCTTTGTTAGGTAAATACTATAGGGCTGGTCTTAACGTCCTTGCTGACAGCTaGGTATTCACAGCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LETELMPLLGKYYRAGLNVLADS*VFTAQA Trigger: AGCCTGTGCTGTGAATACCAAGCTGTCAGCAAGGAC...GTTAAGACCAGCCCTATAGTATTTACCTAACAAAGGCATAAGTTCAGTTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS-3UTR CAA 90 bp | TACATGAAAGGACCATGCTCTTCATTTATTCCAGTCCTGAGCAGTTTATTCATTTCTAAGAACTTGGTGTaGTTGGCAAACATGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YMKGPCSSFIPVLSSLFISKNLV*LANMPP Trigger: TGGGGGCATGTTTGCCAACAACACCAAGTTCTTAGA...AATGAATAAACTGCTCAGGACTGGAATAAATGAAGAGCATGGTCCTTTCATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS-3UTR CAA 90 bp | TACATGAAAGGACCATGCTCTTCATTTATTCCAGTCCTGAGCAGTTTATTCATTCATGACATTTGTACCTaGGCTCTGAGTCTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YMKGPCSSFIPVLSSLFIHDICT*ALSLLH Trigger: ATGAAGGAGACTCAGAGCCAAGGTACAAATGTCATG...AATGAATAAACTGCTCAGGACTGGAATAAATGAAGAGCATGGTCCTTTCATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS CCA 72 bp | ATGCCCCCACAGGTGGGACAGGCCACCACCTTCTCCTaGGTGTGGCTGCGGAGGTGTTCTCGAAGCTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: MPPQVGQATTFS*VWLRRCSRSLH Trigger: GTGTAAGCTTCGAGAACACCTCCGCAGCCACACCCAGGAGAAGGTGGTGGCCTGTCCCACCTGTGGGGGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS TCA 72 bp | CCCACAGGCACAGGAAATGGTCAGGGGTGTCAGGGATaGCGTTCCGGCTCTGAAAGTCCAGGATGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PTGTGNGQGCQG*RSGSESPGCRG Trigger: GCCCCTGCATCCTGGACTTTCAGAGCCGGAACGTCATCCCTGACACCCCTGACCATTTCCTGTGCCTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS TCA 72 bp | AAATGGTCAGGGGTGTCAGGGATGACGTTCCGGCTCTaGAAGTCCAGGATGCAGGGGCTGAGGTCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KWSGVSGMTFRL*KSRMQGLRSAW Trigger: CCAGGCTGACCTCAGCCCCTGCATCCTGGACTTTCAGAGCCGGAACGTCATCCCTGACACCCCTGACCATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS CCA 72 bp | AGAACTTGGTGTTGTTGGCAAACATGCCCCCACAGGTaGGACAGGCCACCACCTTCTCCTGGGTGTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RTWCCWQTCPHR*DRPPPSPGCGC Trigger: GCAGCCACACCCAGGAGAAGGTGGTGGCCTGTCCCACCTGTGGGGGCATGTTTGCCAACAACACCAAGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS CAA 72 bp | CGAGGGTGTCCTGAGGGCCACTTGAACTGGTGCTTCTaGCGAAGGTGCACAGTGAGGTTGTTGCCACGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGCPEGHLNWCF*RRCTVRLLPRV Trigger: CACACGTGGCAACAACCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS GCA 72 bp | CGAAAGCGAGGGTGTCCTGAGGGCCACTTGAACTGGTaGTTCTTGCGAAGGTGCACAGTGAGGTTGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RKRGCPEGHLNW*FLRRCTVRLLP Trigger: TGGCAACAACCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS CCA 72 bp | TCTCTTGAGGGTTTCGGAGACTGGCGGGGGCTCTCCTaGGCCTTCAGACAGTACACAGTAGACAATGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLEGFGDWRGLS*AFRQYTVDNVS Trigger: CGAGACATTGTCTACTGTGTACTGTCTGAAGGCCCAGGAGAGCCCCCGCCAGTCTCCGAAACCCTCAAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
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| CDS CAA 72 bp | TCCTTGTACCGAAAGCGAGGGTGTCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGAAGGTGCACAGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLYRKRGCPEGH*NWCFLRRCTVR Trigger: CCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTACAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS TCA 72 bp | TCTTCCTTAGAGCCATGCATGTGCTGCTGCAGGTGCTaGGTGACATGGTCGAAGAACTCCTCCATGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLEPCMCCCRC*VTWSKNSSMAE Trigger: CTCGGCCATGGAGGAGTTCTTCGACCATGTCACTCAGCACCTGCAGCAGCACATGCATGGCTCTAAGGAAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034629.6 ENSMUST00000214660.2 ENSMUST00000216508.2 |
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| CDS TCA 72 bp | GCTTGGTGTGGTAGCAGTGGAAGTAGACATGGCGGATaGGGTCGGCAGAACTGTCCAGAGAGCAAAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AWCGSSGSRHGG*GRQNCPESKSH Trigger: GTGGCTTTTGCTCTCTGGACAGTTCTGCCGACCTCATCCGCCATGTCTACTTCCACTGCTACCACACCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034629.6 ENSMUST00000214660.2 ENSMUST00000216508.2 |
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| CDS CCA 72 bp | TCTGGCGACGGATGTGATCTAAGAACTTGGTGTTGTTaGCAAACATGCCCCCACAGGTGGGACAGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SGDGCDLRTWCC*QTCPHRWDRPP Trigger: TGGTGGCCTGTCCCACCTGTGGGGGCATGTTTGCCAACAACACCAAGTTCTTAGATCACATCCGTCGCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS CCA 72 bp | TACCGAAAGCGAGGGTGTCCTGAGGGCCACTTGAACTaGTGCTTCTTGCGAAGGTGCACAGTGAGGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: YRKRGCPEGHLN*CFLRRCTVRLL Trigger: CAACAACCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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| CDS CAA 72 bp | CAGCCTTTCCAGCCACACTGCACCACATGGTTGTCCTaGCTGACAGCTTGGTATTCACAGCACAGGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QPFQPHCTTWLS*LTAWYSQHRLC Trigger: GCACAGCCTGTGCTGTGAATACCAAGCTGTCAGCAAGGACAACCATGTGGTGCAGTGTGGCTGGAAAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS CAA 90 bp | GCCTTTCCAGCCACACTGCACCACATGGTTGTCCTTGCTGACAGCTaGGTATTCACAGCACAGGCTGTGCGCATCCACATGCCGATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AFPATLHHMVVLADS*VFTAQAVRIHMPIE Trigger: TTCTATCGGCATGTGGATGCGCACAGCCTGTGCTGTGAATACCAAGCTGTCAGCAAGGACAACCATGTGGTGCAGTGTGGCTGGAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS CAA 90 bp | TACCGAAAGCGAGGGTGTCCTGAGGGCCACTTGAACTGGTGCTTCTaGCGAAGGTGCACAGTGAGGTTGTTGCCACGTGTGAAGCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: YRKRGCPEGHLNWCF*RRCTVRLLPRVKHL Trigger: CAAATGCTTCACACGTGGCAACAACCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS TCA 72 bp | TACCTTGGCTCTGAGTCTCCTTCATGCACTTTGCGGTaGTGGGACTTGACAGAGCTGAGTGACCTCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: YLGSESPSCTLR*WDLTELSDLAL Trigger: CAGTGCGAGGTCACTCAGCTCTGTCAAGTCCCATCACCGCAAAGTGCATGAAGGAGACTCAGAGCCAAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS GCA 72 bp | CCCCTAGCACTGTTTCCAGAACAATGCCCTGCAGGCTaGTCTCATTCAGTGCCAATCCCGGATCTGATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLALFPEQCPAG*SHSVPIPDLIL Trigger: AAGGATCAGATCCGGGATTGGCACTGAATGAGAGCAGCCTGCAGGGCATTGTTCTGGAAACAGTGCTAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS CAA 90 bp | TCTTCATGTTCCTTGTACCGAAAGCGAGGGTGTCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGAAGGTGCACAGTGAGGTTGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSCSLYRKRGCPEGH*NWCFLRRCTVRLLP Trigger: TGGCAACAACCTCACTGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTACAAGGAACATGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS TCA 72 bp | ATCTTCATGTTCCTTGTACCGAAAGCGAGGGTGTCCTaGGGGCCACTTGAACTGGTGCTTCTTGCGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IFMFLVPKARVS*GPLELVLLAKV Trigger: CACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTACAAGGAACATGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS GCA 72 bp | TGCAGTTCTCAAAGTCACACCTGTAGGCTGACTCCTTaGTGTGGGTGTCTAGGTGCTTCCGGAGGTCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSQSHTCRLTP*CGCLGASGGQS Trigger: TGATTGACCTCCGGAAGCACCTAGACACCCACAGCAAGGAGTCAGCCTACAGGTGTGACTTTGAGAACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS GCA 72 bp | CCCGGATCTGATCCTTCTTGTAACTGCTGCAGCAACTaGTGTGTCAGCTCCACACTCTCATACCGAACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGSDPSCNCCSN*CVSSTLSYRTS Trigger: GCTAGTTCGGTATGAGAGTGTGGAGCTGACACAGCAGTTGCTGCAGCAGTTACAAGAAGGATCAGATCCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS GCA 72 bp | AGTGCCAATCCCGGATCTGATCCTTCTTGTAACTGCTaGAGCAACTGCTGTGTCAGCTCCACACTCTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SANPGSDPSCNC*SNCCVSSTLSY Trigger: GTATGAGAGTGTGGAGCTGACACAGCAGTTGCTGCAGCAGTTACAAGAAGGATCAGATCCGGGATTGGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS GCA 72 bp | TTCAGTGCCAATCCCGGATCTGATCCTTCTTGTAACTaGTGCAGCAACTGCTGTGTCAGCTCCACACTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSANPGSDPSCN*CSNCCVSSTLS Trigger: TGAGAGTGTGGAGCTGACACAGCAGTTGCTGCAGCAGTTACAAGAAGGATCAGATCCGGGATTGGCACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216508.2 |
||
| CDS TCA 72 bp | ATGCACTTTGCGGTGATGGGACTTGACAGAGCTGAGTaGCCTCGCACTGAAATTGCAGTTCTCAAAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: MHFAVMGLDRAE*PRTEIAVLKVT Trigger: TGTGACTTTGAGAACTGCAATTTCAGTGCGAGGTCACTCAGCTCTGTCAAGTCCCATCACCGCAAAGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
||
| CDS TCA 72 bp | GCATTTGTCACAGACATGACATTTGTACCTTGGCTCTaGGTCTCCTTCATGCACTTTGCGGTGATGGGACTT | + |
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Preference number: 6 (lower is better) Translates to: AFVTDMTFVPWL*VSFMHFAVMGL Trigger: AAGTCCCATCACCGCAAAGTGCATGAAGGAGACTCAGAGCCAAGGTACAAATGTCATGTCTGTGACAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034629.6 ENSMUST00000216508.2 |
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