Pregenerated sensors for HIF3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004328Ensembl transcript IDs: ENSMUST00000037762.11, ENSMUST00000108492.9, ENSMUST00000139224.3, ENSMUST00000153833.2
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGCACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTaGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GAHSEERGPILGVGC*CGVWLSPFWDRRRG Trigger: CCCTCTTCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | GTCTGGGGCCAGCATGAAGTCAGGAGCAGACATGGCAAGCAGAGCTaGGGGGCAGTTGGAAGGCTGAGACTCCATAAGTTGTTTGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: VWGQHEVRSRHGKQS*GAVGRLRLHKLFEV Trigger: CACCTCAAACAACTTATGGAGTCTCAGCCTTCCAACTGCCCCCCAGCTCTGCTTGCCATGTCTGCTCCTGACTTCATGCTGGCCCCAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | GAGATGGGAGTCTTCTCCTGTGGAAGACCCAGAGTAGCACCATCGTaGAAGGGGAGCTGGGGGTTAGGAAGATGCATAGCTGGTGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: EMGVFSCGRPRVAPS*KGSWGLGRCIAGGR Trigger: TCTCCCACCAGCTATGCATCTTCCTAACCCCCAGCTCCCCTTCCACGATGGTGCTACTCTGGGTCTTCCACAGGAGAAGACTCCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 90 bp | ATTGTCACGCACAAAGCTGGGGTTCATCCCTGGCACCACACAAAGTaGGCAAGCTGCTGGACACCTGCAATCGCAGCATTTGAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: IVTHKAGVHPWHHTK*ASCWTPAIAAFERQ Trigger: CTGCCTCTCAAATGCTGCGATTGCAGGTGTCCAGCAGCTTGCTCACTTTGTGTGGTGCCAGGGATGAACCCCAGCTTTGTGCGTGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | GGATGTGTCTCTGCTGGTAGAGTGCTTGATTGTCACGCACAAAGCTaGGGTTCATCCCTGGCACCACACAAAGTGAGCAAGCTGCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: GCVSAGRVLDCHAQS*GSSLAPHKVSKLLD Trigger: GTCCAGCAGCTTGCTCACTTTGTGTGGTGCCAGGGATGAACCCCAGCTTTGTGCGTGACAATCAAGCACTCTACCAGCAGAGACACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 90 bp | CCACACAAAGTGAGCAAGCTGCTGGACACCTGCAATCGCAGCATTTaGGAGGCAGAGGGAAGAGGGTCACAAGTTCAAGGTCATCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: PHKVSKLLDTCNRSI*EAEGRGSQVQGHLW Trigger: CCAGAGATGACCTTGAACTTGTGACCCTCTTCCCTCTGCCTCTCAAATGCTGCGATTGCAGGTGTCCAGCAGCTTGCTCACTTTGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 90 bp | ACCCATGAGGGGAGAGAGGATTCAGTCCCTTTCCCCTGTAGCACCTaGACAGGCCACCTCTTGACAAGACAAAGTAGTGCCTTCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: THEGREDSVPFPCST*TGHLLTRQSSAFQR Trigger: TCTTTGGAAGGCACTACTTTGTCTTGTCAAGAGGTGGCCTGTTCAGGTGCTACAGGGGAAAGGGACTGAATCCTCTCTCCCCTCATGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | GAGGGCCTAAAGTCTAGAATCAGAGAAAAGGCCAGAGAAGTGGCATaGTCTAGAACCAGAGCCAGGTCCAAAGGCCTGCAGTCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: EGLKSRIREKAREVA*SRTRARSKGLQSRV Trigger: GACTCTAGACTGCAGGCCTTTGGACCTGGCTCTGGTTCTAGACCATGCCACTTCTCTGGCCTTTTCTCTGATTCTAGACTTTAGGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR GCA 90 bp | TCCCACATTTGCCACGGAAGAGGGGGAAGACCAGAGTCTCACAATTaGTGTGGATCTGTGCAATGCAGAGTGACTGAATGCCCTATTGTG | + |
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Preference number: 1 (lower is better) Translates to: SHICHGRGGRPESHN*CGSVQCRVTECPIV Trigger: CACAATAGGGCATTCAGTCACTCTGCATTGCACAGATCCACAGCAATTGTGAGACTCTGGTCTTCCCCCTCTTCCGTGGCAAATGTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR GCA 90 bp | CCAGAGAAGTGGCATGGTCTAGAACCAGAGCCAGGTCCAAAGGCCTaGAGTCTAGAGTCAGGTAAAAGACTGGAGACTGTACAGACTAGA | + |
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Preference number: 1 (lower is better) Translates to: PEKWHGLEPEPGPKA*SLESGKRLETVQTR Trigger: TCTAGTCTGTACAGTCTCCAGTCTTTTACCTGACTCTAGACTGCAGGCCTTTGGACCTGGCTCTGGTTCTAGACCATGCCACTTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | CACGTGCAAGGCCTGAGGTTTAATCCTTGCTACTACACACACCAATaGTCTGCAATGACAGGCAGCAGAGGGCATGAGAACCAGAGGATT | + |
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Preference number: 1 (lower is better) Translates to: HVQGLRFNPCYYTHQ*SAMTGSRGHENQRI Trigger: AATCCTCTGGTTCTCATGCCCTCTGCTGCCTGTCATTGCAGACCATTGGTGTGTGTAGTAGCAAGGATTAAACCTCAGGCCTTGCACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | GTGCCTAACAAGGAGAGGTCTTTATGGTGGTTTTGGAGACATTTGTaGGTTTCTGGGCTAAGGATAGCTGGGCCATGTCCTTCCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: VPNKERSLWWFWRHL*VSGLRIAGPCPSLP Trigger: AGGGAGGGAAGGACATGGCCCAGCTATCCTTAGCCCAGAAACCCACAAATGTCTCCAAAACCACCATAAAGACCTCTCCTTGTTAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 90 bp | GTGCTAGGATCAGAGACGTGCACCACCACTGCCCACCTTGATATTTaGAGCTCAGTAATAGGCAGATCACCAGAGCATCTGAGAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: VLGSETCTTTAHLDI*SSVIGRSPEHLRTE Trigger: CTCTGTTCTCAGATGCTCTGGTGATCTGCCTATTACTGAGCTTCAAATATCAAGGTGGGCAGTGGTGGTGCACGTCTCTGATCCTAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | ATGAGACAGGAGGGGCTTGAGCGTGAACTTCATGAGCAGAACATCTaGGAGGAGAAGACTGGAGGGTTAAGAACTGAGACAAGTTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: MRQEGLERELHEQNI*EEKTGGLRTETSSV Trigger: CACTGAACTTGTCTCAGTTCTTAACCCTCCAGTCTTCTCCTCCCAGATGTTCTGCTCATGAAGTTCACGCTCAAGCCCCTCCTGTCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 90 bp | TTCCTAAGTGCTAGGATCAGAGACGTGCACCACCACTGCCCACCTTaGTATTTGAAGCTCAGTAATAGGCAGATCACCAGAGCATCTGAG | + |
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Preference number: 1 (lower is better) Translates to: FLSARIRDVHHHCPP*YLKLSNRQITRASE Trigger: CTCAGATGCTCTGGTGATCTGCCTATTACTGAGCTTCAAATATCAAGGTGGGCAGTGGTGGTGCACGTCTCTGATCCTAGCACTTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR GCA 90 bp | CATAAGTTGTTTGAGGTGAAATCTGACCCAGAGTCTTCCCACATTTaGCACGGAAGAGGGGGAAGACCAGAGTCTCACAATTGCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: HKLFEVKSDPESSHI*HGRGGRPESHNCCG Trigger: TCCACAGCAATTGTGAGACTCTGGTCTTCCCCCTCTTCCGTGGCAAATGTGGGAAGACTCTGGGTCAGATTTCACCTCAAACAACTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR GCA 90 bp | GTTTTCAGTCTAGAGCCAACAAAGACCAGGAGCTACATGTCTAGGTaGAAGGAAGAGAGAAAGTGGTATAGCCTAGGTCCAGGGAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VFSLEPTKTRSYMSR*KEERKWYSLGPGKA Trigger: AGCCTTCCCTGGACCTAGGCTATACCACTTTCTCTCTTCCTTGCACCTAGACATGTAGCTCCTGGTCTTTGTTGGCTCTAGACTGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR GCA 90 bp | AGAGGGGGAAGACCAGAGTCTCACAATTGCTGTGGATCTGTGCAATaGAGAGTGACTGAATGCCCTATTGTGAAAAGGACAAAGTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: RGGRPESHNCCGSVQ*RVTECPIVKRTKSS Trigger: GCTTGACTTTGTCCTTTTCACAATAGGGCATTCAGTCACTCTGCATTGCACAGATCCACAGCAATTGTGAGACTCTGGTCTTCCCCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 90 bp | ACCAGAGTCTCACAATTGCTGTGGATCTGTGCAATGCAGAGTGACTaGATGCCCTATTGTGAAAAGGACAAAGTCAAGCCGATAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: TRVSQLLWICAMQSD*MPYCEKDKVKPIEE Trigger: CTCTTCTATCGGCTTGACTTTGTCCTTTTCACAATAGGGCATTCAGTCACTCTGCATTGCACAGATCCACAGCAATTGTGAGACTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CCA 90 bp | ACATGGGTAATGATTAAAGGTAATGAAATCCAGAACCCAAAAGAATaGGCACGTGGTATGTGGTTCCAGAAAGGCCAGATCCAAGTTCAA | + |
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Preference number: 1 (lower is better) Translates to: TWVMIKGNEIQNPKE*ARGMWFQKGQIQVQ Trigger: TTGAACTTGGATCTGGCCTTTCTGGAACCACATACCACGTGCCCATTCTTTTGGGTTCTGGATTTCATTACCTTTAATCATTACCCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR GCA 90 bp | AATCTGTGGGCTGTGACCACTTTGAGGATCAGATATCAGATATCCTaGATACCAGATATTTACATTATGATTCATAACAGATGCAAAATT | + |
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Preference number: 1 (lower is better) Translates to: NLWAVTTLRIRYQIS*IPDIYIMIHNRCKI Trigger: AATTTTGCATCTGTTATGAATCATAATGTAAATATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACAGCCCACAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR TCA 90 bp | TATGCAGATAGGGCTGTGCGTGTGCCTGTGTGCGGCTGGATTATGGAGCTCCTATGCAATCGCAGCATTTaGGAGGCAGAGGGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: YADRAVRVPVCGWIMELLCNRSI*EAEGRG Trigger: CCCTCTTCCCTCTGCCTCTCAAATGCTGCGATTGCA...TAGGAGCTCCATAATCCAGCCGCACACAGGCACACGCACAGCCCTATCTGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGATGTGTCTCTGCTGGTAGAGTGCTTGATTGTCACGCACAAAGCTGGGGTTCAAGAAGCCTCCGACTaGGGGCAGCAGAAGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RDVSLLVECLIVTHKAGVQEASD*GQQKVG Trigger: CCCAACCTTCTGCTGCCCCCAGTCGGAGGCTTCTTG...AACCCCAGCTTTGTGCGTGACAATCAAGCACTCTACCAGCAGAGACACATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | TATGCAGATAGGGCTGTGCGTGTGCCTGTGTGCGGCTGGATTATGGAGCTCCTATGTAGGCTGCTGGTGTaGAGTGTGGCTGAGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: YADRAVRVPVCGWIMELLCRLLV*SVAESF Trigger: AAAGGACTCAGCCACACTCCACACCAGCAGCCTACA...TAGGAGCTCCATAATCCAGCCGCACACAGGCACACGCACAGCCCTATCTGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 90 bp | TTCAGTGAGGGCTGGGAAGCCCAGACGGAGCTAGAAGGATCAGATTaGAACCCAGGGAGTCAAGGGGTGCGAGATCTTAGATCAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: FSEGWEAQTELEGSD*NPGSQGVRDLRSRT Trigger: TGTCCTTGATCTAAGATCTCGCACCCCTTGACTCCCTGGGTTCAAATCTGATCCTTCTAGCTCCGTCTGGGCTTCCCAGCCCTCACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGCATTTGAGAGGCAGAGGGAAGAGGGTCACAAGTTCAAGGTCATCTCTGGCGCAGATTGGGAGCTGTaGGATCCAGCCCAAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AAFERQREEGHKFKVISGADWEL*DPAQER Trigger: TCTTTCTTGGGCTGGATCTCACAGCTCCCAATCTGC...GCCAGAGATGACCTTGAACTTGTGACCCTCTTCCCTCTGCCTCTCAAATGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGAACTTGCTCGATAGATCAGCTGGCCTCAAACTTAGAGATTTGCCTCCTCATGGCAAGCAGAGCTaGGGGGCAGTTGGAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SWNLLDRSAGLKLRDLPPHGKQS*GAVGRL Trigger: CAGCCTTCCAACTGCCCCCCAGCTCTGCTTGCCATG...AGGAGGCAAATCTCTAAGTTTGAGGCCAGCTGATCTATCGAGCAAGTTCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | TATGCAGATAGGGCTGTGCGTGTGCCTGTGTGCGGCTGGATTATGGAGCTCCTAGACATAAGACAGGACTaGGGAAAGCTCCGTGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: YADRAVRVPVCGWIMELLDIRQD*GKLRGR Trigger: TCTACCACGGAGCTTTCCCCAGTCCTGTCTTATGTC...TAGGAGCTCCATAATCCAGCCGCACACAGGCACACGCACAGCCCTATCTGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 90 bp | ACCACACAAAGTGAGCAAGCTGCTGGACACCTGCAATCGCAGCATTaGAGAGGCAGAGGGAAGAGGGTCACAAGTTCAAGGTCATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TTQSEQAAGHLQSQH*RGRGKRVTSSRSSL Trigger: CAGAGATGACCTTGAACTTGTGACCCTCTTCCCTCTGCCTCTCAAATGCTGCGATTGCAGGTGTCCAGCAGCTTGCTCACTTTGTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTCCCACATTTGCCACGGAAGAGGGGGAAGACCAGAGTCTCACAATTGCTGCCTCCCAAAGGTCACTaGGCTGAGAATACCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VFPHLPRKRGKTRVSQLLPPKGH*AENTQE Trigger: TTCTTGGGTATTCTCAGCTCAGTGACCTTTGGGAGG...CAGCAATTGTGAGACTCTGGTCTTCCCCCTCTTCCGTGGCAAATGTGGGAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCTGTGACCACTTTGAGGATCAGATATCAGATATCCTGCATACCAGATATGGGGCAGCAGAAGGTTaGGGGGCTGAGGTAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: VGCDHFEDQISDILHTRYGAAEG*GAEVGL Trigger: CAGTCCTACCTCAGCCCCCCAACCTTCTGCTGCCCC...ATATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACAGCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 90 bp | CTGGTGCCTAACAAGGAGAGGTCTTTATGGTGGTTTTGGAGACATTaGTGGGTTTCTGGGCTAAGGATAGCTGGGCCATGTCCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LVPNKERSLWWFWRH*WVSGLRIAGPCPSL Trigger: GAGGGAAGGACATGGCCCAGCTATCCTTAGCCCAGAAACCCACAAATGTCTCCAAAACCACCATAAAGACCTCTCCTTGTTAGGCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR GCA 90 bp | TATGCAGATAGGGCTGTGCGTGTGCCTGTGTGCGGCTGGATTATGGAGCTCCTATGCAGAGTGACTGAATaGCCTATTGTGAAAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: YADRAVRVPVCGWIMELLCRVTE*PIVKRT Trigger: TGTCCTTTTCACAATAGGGCATTCAGTCACTCTGCA...TAGGAGCTCCATAATCCAGCCGCACACAGGCACACGCACAGCCCTATCTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAGGAGAGGTCTTTATGGTGGTTTTGGAGACATTTGTGGGTTTCTGGGCTAATGCAGATAGGGCTGTaGGTGTGCCTGTGTGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: NKERSLWWFWRHLWVSGLMQIGL*VCLCAA Trigger: AGCCGCACACAGGCACACGCACAGCCCTATCTGCAT...TAGCCCAGAAACCCACAAATGTCTCCAAAACCACCATAAAGACCTCTCCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 90 bp | GATTTTGAGACAGGGTTTCTCCATGTAGCCCTGGCATCCTGGAACTaGCTCGATAGATCAGCTGGCCTCAAACTTAGAGATTTGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: DFETGFLHVALASWN*LDRSAGLKLRDLPP Trigger: AGGAGGCAAATCTCTAAGTTTGAGGCCAGCTGATCTATCGAGCAAGTTCCAGGATGCCAGGGCTACATGGAGAAACCCTGTCTCAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGCAGAGGGCATGAGAACCAGAGGATTTTTAAGAAGAGGCCTAGAACCAAACCCCACTTTAAAATaGCAGATTGGGAGCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: QAAEGMRTRGFLRRGLEPNPTLK*QIGSCE Trigger: CTCACAGCTCCCAATCTGCCATTTTAAAGTGGGGTT...TGGTTCTAGGCCTCTTCTTAAAAATCCTCTGGTTCTCATGCCCTCTGCTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTTAAAATGGCAGATTGGGAGCTGTGAGATCCAGCCCAAGAAAGAACTAAAGTGGCTGAGTCCTTTCTaGGATAGAAGAAGAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TLKWQIGSCEIQPKKELKWLSPF*DRRRGL Trigger: CAGCCCTCTTCTTCTATCCCAGAAAGGACTCAGCCA...CTTTAGTTCTTTCTTGGGCTGGATCTCACAGCTCCCAATCTGCCATTTTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR TCA 90 bp | AACAAGGAGAGGTCTTTATGGTGGTTTTGGAGACATTTGTGGGTTTCTGGGCTACACCACTGCCCACCTTaGTATTTGAAGCTCAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: NKERSLWWFWRHLWVSGLHHCPP*YLKLSN Trigger: ATTACTGAGCTTCAAATATCAAGGTGGGCAGTGGTG...TAGCCCAGAAACCCACAAATGTCTCCAAAACCACCATAAAGACCTCTCCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTCTAGATTCAGGGTACTTTGAGTTGTTAAGATCTGAAGTAAAGAGGACTTATAGGTCTGTGGAGTaGAGGAAGTCGCTGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SVLDSGYFELLRSEVKRTYRSVE*RKSLAP Trigger: GGGAGCCAGCGACTTCCTCCACTCCACAGACCTATA...AGTCCTCTTTACTTCAGATCTTAACAACTCAAAGTACCCTGAATCTAGAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGGCTGTGACCACTTTGAGGATCAGATATCAGATATCCTGCATACCAGATATGTGGTCACTACAACATaGGAAACTGTATTAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VGCDHFEDQISDILHTRYVVTTT*ETVLEG Trigger: ACCCTCTAATACAGTTTCTCATGTTGTAGTGACCAC...ATATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACAGCCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 90 bp | GTAGAGTCTAGAACAGCAGCTCTCAATCTGTGGGCTGTGACCACTTaGAGGATCAGATATCAGATATCCTGCATACCAGATATTTACATT | + |
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Preference number: 2 (lower is better) Translates to: VESRTAALNLWAVTT*RIRYQISCIPDIYI Trigger: AATGTAAATATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACAGCCCACAGATTGAGAGCTGCTGTTCTAGACTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 90 bp | AAAAGACTGGAGACTGTACAGACTAGAACTAGAGAATGTCAGAGATaGAACAGTCTAGAACAAAAGAAGGCAGGAACAACACAGTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: KRLETVQTRTRECQR*NSLEQKKAGTTQFR Trigger: TCTAAACTGTGTTGTTCCTGCCTTCTTTTGTTCTAGACTGTTCAATCTCTGACATTCTCTAGTTCTAGTCTGTACAGTCTCCAGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTCTAGATTCAGGGTACTTTGAGTTGTTAAGATCTGAAGTAAAGAGGACTGCCAGGGAAAAGCCATaGATTGTATGTTTTAGAACC | + |
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Preference number: 2 (lower is better) Translates to: SVLDSGYFELLRSEVKRTAREKP*IVCFRT Trigger: GGTTCTAAAACATACAATCCATGGCTTTTCCCTGGC...AGTCCTCTTTACTTCAGATCTTAACAACTCAAAGTACCCTGAATCTAGAACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 72 bp | GGGAGGGTCACACACCCCTCCCAAAGGTCACTGAGCTaGGAATACCCAAGAAGCCTCCGACTGGGGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GRVTHPSQRSLS*EYPRSLRLGAA Trigger: TGCTGCCCCCAGTCGGAGGCTTCTTGGGTATTCTCAGCTCAGTGACCTTTGGGAGGGGTGTGTGACCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR TCA 72 bp | AGGTGGGGAGGGTCACACACCCCTCCCAAAGGTCACTaGGCTGAGAATACCCAAGAAGCCTCCGACTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RWGGSHTPPKGH*AENTQEASDWG Trigger: CCCCCAGTCGGAGGCTTCTTGGGTATTCTCAGCTCAGTGACCTTTGGGAGGGGTGTGTGACCCTCCCCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR GCA 72 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTaGTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: HSEERGPILGVG*WCGVWLSPFWD Trigger: ATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| 3UTR CCA 72 bp | TCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTaGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SEERGPILGVGC*CGVWLSPFWDR Trigger: TCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | TATGCAGATAGGGCTGTGCGTGTGCCTGTGTGCGGCTaGATTATGGAGCTCCTAGGAAGGAGAAGGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YADRAVRVPVCG*IMELLGRRRSP Trigger: GGGGCTCCTTCTCCTTCCTAGGAGCTCCATAATCCAGCCGCACACAGGCACACGCACAGCCCTATCTGCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | GGAAGACCCAGAGTAGCACCATCGTGGAAGGGGAGCTaGGGGTTAGGAAGATGCATAGCTGGTGGGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: GRPRVAPSWKGS*GLGRCIAGGRQ Trigger: CTGTCTCCCACCAGCTATGCATCTTCCTAACCCCCAGCTCCCCTTCCACGATGGTGCTACTCTGGGTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | GTCTTCTCCTGTGGAAGACCCAGAGTAGCACCATCGTaGAAGGGGAGCTGGGGGTTAGGAAGATGCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VFSCGRPRVAPS*KGSWGLGRCIA Trigger: AGCTATGCATCTTCCTAACCCCCAGCTCCCCTTCCACGATGGTGCTACTCTGGGTCTTCCACAGGAGAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR TCA 72 bp | CACAAAGCTGGGGTTCATCCCTGGCACCACACAAAGTaGGCAAGCTGCTGGACACCTGCAATCGCAGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HKAGVHPWHHTK*ASCWTPAIAAF Trigger: AAATGCTGCGATTGCAGGTGTCCAGCAGCTTGCTCACTTTGTGTGGTGCCAGGGATGAACCCCAGCTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR TCA 72 bp | GGGAGAGAGGATTCAGTCCCTTTCCCCTGTAGCACCTaGACAGGCCACCTCTTGACAAGACAAAGTAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GREDSVPFPCST*TGHLLTRQSSA Trigger: GGCACTACTTTGTCTTGTCAAGAGGTGGCCTGTTCAGGTGCTACAGGGGAAAGGGACTGAATCCTCTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR GCA 72 bp | CTCTGGCTCTATAGTGAGCTGGAGGCCAGTCAGAGCTaGATGTCATCCAGCCCATTCCTGGGGAAAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LWLYSELEASQS*MSSSPFLGKEK Trigger: CTTTTCTTTCCCCAGGAATGGGCTGGATGACATGCAGCTCTGACTGGCCTCCAGCTCACTATAGAGCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR GCA 72 bp | TGCCACGGAAGAGGGGGAAGACCAGAGTCTCACAATTaGTGTGGATCTGTGCAATGCAGAGTGACTGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: CHGRGGRPESHN*CGSVQCRVTEC Trigger: GCATTCAGTCACTCTGCATTGCACAGATCCACAGCAATTGTGAGACTCTGGTCTTCCCCCTCTTCCGTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | CACAAGTTCAAGGTCATCTCTGGCTCTATAGTGAGCTaGAGGCCAGTCAGAGCTGCATGTCATCCAGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HKFKVISGSIVS*RPVRAACHPAH Trigger: ATGGGCTGGATGACATGCAGCTCTGACTGGCCTCCAGCTCACTATAGAGCCAGAGATGACCTTGAACTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | TCTGCTGGTAGAGTGCTTGATTGTCACGCACAAAGCTaGGGTTCATCCCTGGCACCACACAAAGTGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SAGRVLDCHAQS*GSSLAPHKVSK Trigger: CTTGCTCACTTTGTGTGGTGCCAGGGATGAACCCCAGCTTTGTGCGTGACAATCAAGCACTCTACCAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR TCA 72 bp | AGTCGCTGGCTCCCCCTAACACAGGAAGATCACAAATaGAGTCATTATTTAGGCAGCGTCTGGGGCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SRWLPLTQEDHK*SHYLGSVWGQH Trigger: ATGCTGGCCCCAGACGCTGCCTAAATAATGACTTCATTTGTGATCTTCCTGTGTTAGGGGGAGCCAGCGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR TCA 72 bp | TCCGTGGTAGAGTGCTTGCCTAGCACGTGCAAGGCCTaGGGTTTAATCCTTGCTACTACACACACCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVVECLPSTCKA*GLILATTHTNG Trigger: ACCATTGGTGTGTGTAGTAGCAAGGATTAAACCTCAGGCCTTGCACGTGCTAGGCAAGCACTCTACCACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR GCA 72 bp | TGGCATGGTCTAGAACCAGAGCCAGGTCCAAAGGCCTaGAGTCTAGAGTCAGGTAAAAGACTGGAGACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WHGLEPEPGPKA*SLESGKRLETV Trigger: TACAGTCTCCAGTCTTTTACCTGACTCTAGACTGCAGGCCTTTGGACCTGGCTCTGGTTCTAGACCATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | AAGTCTAGAATCAGAGAAAAGGCCAGAGAAGTGGCATaGTCTAGAACCAGAGCCAGGTCCAAAGGCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KSRIREKAREVA*SRTRARSKGLQ Trigger: CTGCAGGCCTTTGGACCTGGCTCTGGTTCTAGACCATGCCACTTCTCTGGCCTTTTCTCTGATTCTAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | GGCCTGAGGTTTAATCCTTGCTACTACACACACCAATaGTCTGCAATGACAGGCAGCAGAGGGCATGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GLRFNPCYYTHQ*SAMTGSRGHEN Trigger: GTTCTCATGCCCTCTGCTGCCTGTCATTGCAGACCATTGGTGTGTGTAGTAGCAAGGATTAAACCTCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | GTCTTTATGGTGGTTTTGGAGACATTTGTGGGTTTCTaGGCTAAGGATAGCTGGGCCATGTCCTTCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VFMVVLETFVGF*AKDSWAMSFPP Trigger: GGGAGGGAAGGACATGGCCCAGCTATCCTTAGCCCAGAAACCCACAAATGTCTCCAAAACCACCATAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR TCA 72 bp | TCAGAGACGTGCACCACCACTGCCCACCTTGATATTTaGAGCTCAGTAATAGGCAGATCACCAGAGCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SETCTTTAHLDI*SSVIGRSPEHL Trigger: CAGATGCTCTGGTGATCTGCCTATTACTGAGCTTCAAATATCAAGGTGGGCAGTGGTGGTGCACGTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR TCA 72 bp | GCTAGGATCAGAGACGTGCACCACCACTGCCCACCTTaGTATTTGAAGCTCAGTAATAGGCAGATCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARIRDVHHHCPP*YLKLSNRQITR Trigger: TCTGGTGATCTGCCTATTACTGAGCTTCAAATATCAAGGTGGGCAGTGGTGGTGCACGTCTCTGATCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR GCA 72 bp | TTTGAGGTGAAATCTGACCCAGAGTCTTCCCACATTTaGCACGGAAGAGGGGGAAGACCAGAGTCTCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: FEVKSDPESSHI*HGRGGRPESHN Trigger: ATTGTGAGACTCTGGTCTTCCCCCTCTTCCGTGGCAAATGTGGGAAGACTCTGGGTCAGATTTCACCTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | AGGAGCTACATGTCTAGGTGCAAGGAAGAGAGAAAGTaGTATAGCCTAGGTCCAGGGAAGGCTAGAAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RSYMSRCKEERK*YSLGPGKARSC Trigger: GCAACTTCTAGCCTTCCCTGGACCTAGGCTATACCACTTTCTCTCTTCCTTGCACCTAGACATGTAGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | TTTGAGACAGGGTTTCTCCATGTAGCCCTGGCATCCTaGAACTTGCTCGATAGATCAGCTGGCCTCAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: FETGFLHVALAS*NLLDRSAGLKL Trigger: AAGTTTGAGGCCAGCTGATCTATCGAGCAAGTTCCAGGATGCCAGGGCTACATGGAGAAACCCTGTCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | AAGTATTCAAGATCCAGAGATTATAGGTCTGTGGAGTaGAGGAAGTCGCTGGCTCCCCCTAACACAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KYSRSRDYRSVE*RKSLAPPNTGR Trigger: TCTTCCTGTGTTAGGGGGAGCCAGCGACTTCCTCCACTCCACAGACCTATAATCTCTGGATCTTGAATACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGCAGATAGGGCTGTGCGTGTGCCTGTGTGCGGCTGGATTATGGAGCTCCTAAACCCCAGAAGATATTaGCTGTTTGTTTTGTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YADRAVRVPVCGWIMELLNPRRY*LFVLFC Trigger: ACAGAACAAAACAAACAGCAAATATCTTCTGGGGTT...TAGGAGCTCCATAATCCAGCCGCACACAGGCACACGCACAGCCCTATCTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | AACAAAAGAAGGCAGGAACAACACAGTTTAGAACCATaGAGGCCAGAGGCCACAGTGTCTAGAACAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NKRRQEQHSLEP*RPEATVSRTRE Trigger: TTCCCTTGTTCTAGACACTGTGGCCTCTGGCCTCCATGGTTCTAAACTGTGTTGTTCCTGCCTTCTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTAAAATGGCAGATTGGGAGCTGTGAGATCCAGCCCAAGAAAGAACTAAAGGCAGCATTAGGAAGGTaGAGAACCCCTGTTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLKWQIGSCEIQPKKELKAALGR*RTPVLE Trigger: TTCTAGAACAGGGGTTCTCAACCTTCCTAATGCTGC...CTTTAGTTCTTTCTTGGGCTGGATCTCACAGCTCCCAATCTGCCATTTTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR TCA 72 bp | TTCAAACCCCACTTTAAAATGGCAGATTGGGAGCTGTaGGATCCAGCCCAAGAAAGAACTAAAGAGTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: FKPHFKMADWEL*DPAQERTKEYE Trigger: CTCATACTCTTTAGTTCTTTCTTGGGCTGGATCTCACAGCTCCCAATCTGCCATTTTAAAGTGGGGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | ATGATTAAAGGTAATGAAATCCAGAACCCAAAAGAATaGGCACGTGGTATGTGGTTCCAGAAAGGCCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: MIKGNEIQNPKE*ARGMWFQKGQI Trigger: GATCTGGCCTTTCTGGAACCACATACCACGTGCCCATTCTTTTGGGTTCTGGATTTCATTACCTTTAATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CCA 72 bp | CTTTACAGATTATGTAATTCAAACCCCACTTTAAAATaGCAGATTGGGAGCTGTGAGATCCAGCCCAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LYRLCNSNPTLK*QIGSCEIQPKK Trigger: TTTCTTGGGCTGGATCTCACAGCTCCCAATCTGCCATTTTAAAGTGGGGTTTGAATTACATAATCTGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR GCA 72 bp | GCTGTGACCACTTTGAGGATCAGATATCAGATATCCTaGATACCAGATATTTACATTATGATTCATAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: AVTTLRIRYQIS*IPDIYIMIHNR Trigger: TCTGTTATGAATCATAATGTAAATATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGTCCGAGCACGGGGCCTaGGGGCCACCCTGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEERGPILGVGCWCGVWLSEHGA*GPPWEV Trigger: GACCTCCCAGGGTGGCCCGCAGGCCCCGTGCTCGGA...CAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCGCCTGCGGGCCACCCTaGGAGGTCTGCGGTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESACGPP*EVCGGL Trigger: AAGTCCACCGCAGACCTCCCAGGGTGGCCCGCAGGC...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGTGGGGTGCTGGGCGTaGCAGCTGGGGGAGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWVGCWA*QLGEVH Trigger: ATGGACCTCCCCCAGCTGCCACGCCCAGCACCCCAC...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGGGAGGCGACAGGCCATaGAAGCTCCGAGCACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSEERGPILGVGCWCGVWGGDRP*KLRARG Trigger: GCCCCGTGCTCGGAGCTTCCATGGCCTGTCGCCTCC...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCCAGGCTGTGGCGACTaGGAAAGGCCCCTCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERPHPGCRLLVWSVAESFPGCGD*ERPLGP Trigger: TGGGCCGAGGGGCCTTTCTCAGTCGCCACAGCCTGG...AAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTGTGGGGTGCTGGGCGTaGCAGCTGGGGGAGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERPHPGCRLLVWSVAESFVGCWA*QLGEVH Trigger: ATGGACCTCCCCCAGCTGCCACGCCCAGCACCCCAC...AAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCCTGCGGGCCACCCTaGGAGGTCTGCGGTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLRGERPHPGCRLLVWSVACGPP*EVCGGL Trigger: AAGTCCACCGCAGACCTCCCAGGGTGGCCCGCAGGC...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGCTGGTTCCACTCCCCTaGTGCGCAGAGGCGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEERGPILGVGCWCGVWLLVPLP*CAEAVH Trigger: ATGCACCGCCTCTGCGCAGCAGGGGAGTGGAACCAG...CAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGTCCATCCAGGATGGGTaGCATGAGGCGGCGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWSIQDG*HEAAQV Trigger: GACCTGCGCCGCCTCATGGCACCCATCCTGGATGGA...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGCACCTCCGTCTCCTaGCTGCGCCGGCTGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILGVGCWCGVWLSPFWDRSTSVS*LRRLRA Trigger: GGCCCGCAGCCGGCGCAGCCAGGAGACGGAGGTGCT...TCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCAGAGTGTGCGCCAGCTaGTACAGCACCTCCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESRVCAS*YSTSVS Trigger: GGAGACGGAGGTGCTGTACCAGCTGGCGCACACTCT...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCCAATGAGCTCCAGCTaGCTGAGGCCCAGGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSEERGPILGVGCWCGVWPMSSS*LRPRCL Trigger: CAAGCACCTGGGCCTCAGTCAGCTGGAGCTCATTGG...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGCCAATGAGCTCCAGCTaGCTGAGGCCCAGGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWPMSSS*LRPRCL Trigger: CAAGCACCTGGGCCTCAGTCAGCTGGAGCTCATTGG...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCGGGGTCAGGGCGTCTTaGAGTTCCTCTTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESGVRAS*SSSWSQ Trigger: CTGTGACCAAGAGGAACTTCAAGACGCCCTGACCCC...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCGGCCCTCATATGTCCTaGGCAGTGCAGCACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESGPHMS*AVQHLP Trigger: TGGAAGGTGCTGCACTGCTCAGGACATATGAGGGCC...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGCAACCCTTTGTCCTCTaGGCTCTGGGCCAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEERGPILGVGCWCGVWLQPFVL*ALGQGP Trigger: AGGGCCTTGGCCCAGAGCTCAGAGGACAAAGGGTTG...CAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGAGAGGCCTTGTCCAGGTaGGCGCTGACGCCGCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCWCGVWLSPFWDRREALSR*ALTPRA Trigger: TGCGCGCGGCGTCAGCGCGCACCTGGACAAGGCCTC...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTGGCAGGGGAAGTCTGTaGAGGGGGCTTGTAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERPHPGCRLLVWSVAESFGRGSL*RGLVGP Trigger: AGGGCCTACAAGCCCCCTGCACAGACTTCCCCTGCC...AAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCCAGGAAGCGATACTaGCCCGTTACTGCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLRGERPHPGCRLLVWSVARKRY*PVTAWP Trigger: GGGCCAGGCAGTAACGGGGCAGTATCGCTTCCTGGC...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGACCAGGCTGTGGCGACTaGGAAAGGCCCCTCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCWCGVWLSPFWDRRPGCGD*ERPLGP Trigger: TGGGCCGAGGGGCCTTTCTCAGTCGCCACAGCCTGG...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | GGCTATGCAGGCCTTAGTATTTGGGGTTCAGGGGGAGACAGGAGTCCCACAAAGCCAGGCTGTGGCGACTaGGAAAGGCCCCTCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYAGLSIWGSGGDRSPTKPGCGD*ERPLGP Trigger: TGGGCCGAGGGGCCTTTCTCAGTCGCCACAGCCTGG...CTTTGTGGGACTCCTGTCTCCCCCTGAACCCCAAATACTAAGGCCTGCATAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139224.3 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTGTGGATGCTCCTGCTaGCCGCATCAGAGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESCGCSC*PHQSPK Trigger: CTTTGGACTCTGATGCGGTCAGCAGGAGCATCCACA...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGGGAAGTGGACGCAGATaGTACTTTCCGACTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSEERGPILGVGCWCGVWGSGRR*YFPTGG Trigger: GCCCCCAGTCGGAAAGTATCATCTGCGTCCACTTCC...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTGCAAAGGGCAGAGTGTaGGCCAGCTGGTACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ERPHPGCRLLVWSVAESFAKGRV*ASWYST Trigger: GGTGCTGTACCAGCTGGCGCACACTCTGCCCTTTGC...AAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCATATGTCCTGAGCAGTaGAGCACCTTCCAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESICPEQ*STFQVA Trigger: GGCCACCTGGAAGGTGCTGCACTGCTCAGGACATAT...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGACTCAGGGCCGGAGGGTaGAGGAAGGCCAGGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCWCGVWLSPFWDRRLRAGG*RKARIR Trigger: GCGGATCCTGGCCTTCCTGCACCCTCCGGCCCTGAG...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | AGGGATGTGTCTCTGCTGGTAGAGTGCTTGATTGTCACGCACAAAGCTGGGGTTAGCACCTCCGTCTCCTaGCTGCGCCGGCTGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDVSLLVECLIVTHKAGVSTSVS*LRRLRA Trigger: GGCCCGCAGCCGGCGCAGCCAGGAGACGGAGGTGCT...AACCCCAGCTTTGTGCGTGACAATCAAGCACTCTACCAGCAGAGACACATCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTCATGTCCAGGCTGTaGCGACTGAGAAAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESFMSRL*RLRKAP Trigger: AGGGGCCTTTCTCAGTCGCCACAGCCTGGACATGAA...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAGGAGGCGACAGGCCATaGAAGCTCCGAGCACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGVGCWCGVWLSPFWDRGGDRP*KLRARG Trigger: GCCCCGTGCTCGGAGCTTCCATGGCCTGTCGCCTCC...TCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGGGCCCAGGTGCTTGCTaGCATTTTCCGACAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SEERGPILGVGCWCGVWLGPGAC*HFPTGK Trigger: CTTACCTGTCGGAAAATGTCAGCAAGCACCTGGGCC...CAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | ATTGGTGTCAGCAGGGGGCCATACAGCAGCTGGCTCTGGCCTGGGGGCATGTTGTGTGGATGCTCCTGCTaGCCGCATCAGAGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IGVSRGPYSSWLWPGGMLCGCSC*PHQSPK Trigger: CTTTGGACTCTGATGCGGTCAGCAGGAGCATCCACA...CAACATGCCCCCAGGCCAGAGCCAGCTGCTGTATGGCCCCCTGCTGACACCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139224.3 |
||
| CDS-3UTR TCA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGGAAGTGGACGCAGATaGTACTTTCCGACTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRGERPHPGCRLLVWSVGSGRR*YFPTGG Trigger: GCCCCCAGTCGGAAAGTATCATCTGCGTCCACTTCC...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | AGTCTCCAACACCACATACAACTAGGCATGTCTGTAACCCCAGCACTTGGTGGGGAGGCCTTGTCCAGGTaGGCGCTGACGCCGCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQHHIQLGMSVTPALGGEALSR*ALTPRA Trigger: TGCGCGCGGCGTCAGCGCGCACCTGGACAAGGCCTC...CCCACCAAGTGCTGGGGTTACAGACATGCCTAGTTGTATGTGGTGTTGGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGATATGTCCTGAGCAGTaGAGCACCTTCCAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWICPEQ*STFQVA Trigger: GGCCACCTGGAAGGTGCTGCACTGCTCAGGACATAT...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | GATTTTGAGACAGGGTTTCTCCATGTAGCCCTGGCATCCTGGAACTTGCTCGATTCCGAGCACGGGGCCTaGGGGCCACCCTGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DFETGFLHVALASWNLLDSEHGA*GPPWEV Trigger: GACCTCCCAGGGTGGCCCGCAGGCCCCGTGCTCGGA...ATCGAGCAAGTTCCAGGATGCCAGGGCTACATGGAGAAACCCTGTCTCAAAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTGTAGCAGGCGTCCAGTaGCTCTCCCCCTTTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERPHPGCRLLVWSVAESFVAGVQ*LSPFFH Trigger: GTGGAAAAAGGGGGAGAGCCACTGGACGCCTGCTAC...AAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGTCCAGACTGGCTGGGTaGGGGATGGCTTCACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWSRLAG*GMASQI Trigger: TATCTGTGAAGCCATCCCCCACCCAGCCAGTCTGGA...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | ATTGGTGTCAGCAGGGGGCCATACAGCAGCTGGCTCTGGCCTGGGGGCATGTTGTCCAGACTGGCTGGGTaGGGGATGGCTTCACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: IGVSRGPYSSWLWPGGMLSRLAG*GMASQI Trigger: TATCTGTGAAGCCATCCCCCACCCAGCCAGTCTGGA...CAACATGCCCCCAGGCCAGAGCCAGCTGCTGTATGGCCCCCTGCTGACACCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000139224.3 |
||
| CDS-3UTR CCA 90 bp | GAATTGGTGTCAGCAGGGGGCCATACAGCAGCTGGCTCTGGCCTGGGGGCATGTTTCATGTCCAGGCTGTaGCGACTGAGAAAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELVSAGGHTAAGSGLGACFMSRL*RLRKAP Trigger: AGGGGCCTTTCTCAGTCGCCACAGCCTGGACATGAA...ACATGCCCCCAGGCCAGAGCCAGCTGCTGTATGGCCCCCTGCTGACACCAATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000139224.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGTGCCCCGTTACTGCCTaGCCCTTGCTCAACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWCPVTA*PLLNKV Trigger: CACTTTGTTGAGCAAGGGCCAGGCAGTAACGGGGCA...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | CTGGGGGTTAGGAAGATGCATAGCTGGTGGGAGACAGTGGAGGGGTCCTGCCCTTGTGGATGCTCCTGCTaGCCGCATCAGAGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGVRKMHSWWETVEGSCPCGCSC*PHQSPK Trigger: CTTTGGACTCTGATGCGGTCAGCAGGAGCATCCACA...AGGGCAGGACCCCTCCACTGTCTCCCACCAGCTATGCATCTTCCTAACCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGGCAGTGGAGAGTCTGTaGGCATTTTCCAAGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SEERGPILGVGCWCGVWLAVESL*AFSKPT Trigger: AGTGGGCTTGGAAAATGCGCACAGACTCTCCACTGC...CAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGGGGAGTTGTCGACCTTaGAGAAGGAAACTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSEERGPILGVGCWCGVWGSCRP*RRKLRL Trigger: CAGCCTGAGTTTCCTTCTGCAAGGTCGACAACTCCC...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGTGGACAGTTTCCTCATaGTGGCAGAGAGAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSEERGPILGVGCWCGVWWTVSS*WQRESS Trigger: GCTGCTCTCTCTCTGCCAGCATGAGGAAACTGTCCA...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTGCTCAACAAAGTGTaGATGCTCCTGCTGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GERPHPGCRLLVWSVAESLLNKV*MLLLTA Trigger: TGCGGTCAGCAGGAGCATCCACACTTTGTTGAGCAA...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGAGAGGCGGCGCAGGTCTaGACTACAGAAACGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCWCGVWLSPFWDRREAAQV*TTETAR Trigger: CCTCGCCGTTTCTGTAGTCCAGACCTGCGCCGCCTC...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGATACTGCCCCGTTACTaGCTGGCCCTTGCTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLRGERPHPGCRLLVWSVILPRY*LALAQQ Trigger: TTGTTGAGCAAGGGCCAGGCAGTAACGGGGCAGTAT...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCGGCTGATCAGGAAGTaGACGCAGATGATACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSEERGPILGVGCWCGVWRLIRK*TQMILS Trigger: GGAAAGTATCATCTGCGTCCACTTCCTGATCAGCCG...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGACGGTCTTGTTTTTCTaGGCAGTGGAGAGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWTVLFF*AVESLC Trigger: GCACAGACTCTCCACTGCCCAGAAAAACAAGACCGT...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGTCGCTGGAGTTGAGCTaGAAGTCATCATCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSEERGPILGVGCWCGVWSLELS*KSSSME Trigger: CTCCATGGATGATGACTTCCAGCTCAACTCCAGCGA...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGAGGAACAGTTCAGTCGTaGATCACTCCCCCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCWCGVWLSPFWDRRGTVQS*ITPPAG Trigger: CCCCGCTGGGGGAGTGATCCACGACTGAACTGTTCC...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGTTACTGCCTGGCCCTTaGTCAACAAAGTGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRGERPHPGCRLLVWSVLLPGP*STKCGC Trigger: GCATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAA...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCTAGAATCAGAGAAAAGGCCAGAGAAGTGGCATGGTCTAGAACCAGAGCCCTCAGGGCCGGAGGGTaGAGGAAGGCCAGGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRIREKAREVAWSRTRALRAGG*RKARIR Trigger: GCGGATCCTGGCCTTCCTGCACCCTCCGGCCCTGAG...GGCTCTGGTTCTAGACCATGCCACTTCTCTGGCCTTTTCTCTGATTCTAGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCATTTGAGAGGCAGAGGGAAGAGGGTCACAAGTTCAAGGTCATCTCTGGCAGAGTGTGCGCCAGCTaGTACAGCACCTCCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAFERQREEGHKFKVISGRVCAS*YSTSVS Trigger: GGAGACGGAGGTGCTGTACCAGCTGGCGCACACTCT...GCCAGAGATGACCTTGAACTTGTGACCCTCTTCCCTCTGCCTCTCAAATGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGAAAGTGGCGCTCTGTTaGGGCTTCCAGCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLRGERPHPGCRLLVWSVKVALC*GFQLLL Trigger: AAGAAGAAGCTGGAAGCCCCAACAGAGCGCCACTTT...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGATTGTCCTCTGAGCTCTaGGCCAAGGCCCTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ILGVGCWCGVWLSPFWDRLSSEL*AKALFR Trigger: TCGGAAGAGGGCCTTGGCCCAGAGCTCAGAGGACAA...TCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACATGTCTAGGTGCAAGGAAGAGAGAAAGTGGTATAGCCTAGGTCCAGGGGAGGCGGCGCAGGTCTaGACTACAGAAACGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYMSRCKEERKWYSLGPGEAAQV*TTETAR Trigger: CCTCGCCGTTTCTGTAGTCCAGACCTGCGCCGCCTC...CCCTGGACCTAGGCTATACCACTTTCTCTCTTCCTTGCACCTAGACATGTAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGTGTTTTTCTGGGCAGTaGAGAGTCTGTGCGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPILGVGCWCGVWLSPFWCFSGQ*RVCAHF Trigger: AAAATGCGCACAGACTCTCCACTGCCCAGAAAAACA...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGAAAGCGGTTCCTGGGCTaGACAGTTTCCTCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCWCGVWLSPFWDRRKRFLG*TVSSCW Trigger: CCAGCATGAGGAAACTGTCCAGCCCAGGAACCGCTT...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTCCCACATTTGCCACGGAAGAGGGGGAAGACCAGAGTCTCACAATTGCTGGGCCCAGGTGCTTGCTaGCATTTTCCGACAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFPHLPRKRGKTRVSQLLGPGAC*HFPTGK Trigger: CTTACCTGTCGGAAAATGTCAGCAAGCACCTGGGCC...CAGCAATTGTGAGACTCTGGTCTTCCCCCTCTTCCGTGGCAAATGTGGGAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGATGGACAGTTTCCTCATaGTGGCAGAGAGAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGVGCWCGVWLSPFWDRWTVSS*WQRESS Trigger: GCTGCTCTCTCTCTGCCAGCATGAGGAAACTGTCCA...TCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGAACAGTTTCCTCATGCTaGCAGAGAGAGAGCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCWCGVWLSPFWDRRTVSSC*QRESSE Trigger: CTCGCTGCTCTCTCTCTGCCAGCATGAGGAAACTGT...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| 3UTR CAA 72 bp | CACAAAGCCCTGGTTTTGTGTTCAGGAGACCAAGAATaGGTGTCAGCAGGGGGCCATACAGCAGCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKALVLCSGDQE*VSAGGHTAAGS Trigger: AGAGCCAGCTGCTGTATGGCCCCCTGCTGACACCAATTCTTGGTCTCCTGAACACAAAACCAGGGCTTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139224.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAATTGCTCGCTGGAGTTaGGCTGGAAGTCATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILGVGCWCGVWLSPFWDRIARWS*AGSHHP Trigger: TGGATGATGACTTCCAGCTCAACTCCAGCGAGCAAT...TCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR GCA 90 bp | AAGTCTAGAATCAGAGAAAAGGCCAGAGAAGTGGCATGGTCTAGAACCAGAGCCGCAAAGGGCAGAGTGTaGGCCAGCTGGTACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KSRIREKAREVAWSRTRAAKGRV*ASWYST Trigger: GGTGCTGTACCAGCTGGCGCACACTCTGCCCTTTGC...GGCTCTGGTTCTAGACCATGCCACTTCTCTGGCCTTTTCTCTGATTCTAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR GCA 90 bp | AACACAGGAAGATCACAAATGAAGTCATTATTTAGGCAGCGTCTGGGGCCAGCAGCCAGGAAGCGATACTaGCCCGTTACTGCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTGRSQMKSLFRQRLGPAARKRY*PVTAWP Trigger: GGGCCAGGCAGTAACGGGGCAGTATCGCTTCCTGGC...TGCTGGCCCCAGACGCTGCCTAAATAATGACTTCATTTGTGATCTTCCTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR CCA 90 bp | AAGTCTAGAATCAGAGAAAAGGCCAGAGAAGTGGCATGGTCTAGAACCAGAGCCGGAACAGTTCAGTCGTaGATCACTCCCCCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSRIREKAREVAWSRTRAGTVQS*ITPPAG Trigger: CCCCGCTGGGGGAGTGATCCACGACTGAACTGTTCC...GGCTCTGGTTCTAGACCATGCCACTTCTCTGGCCTTTTCTCTGATTCTAGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR TCA 90 bp | AACACAGGAAGATCACAAATGAAGTCATTATTTAGGCAGCGTCTGGGGCCAGCACAACCCTTTGTCCTCTaGGCTCTGGGCCAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGRSQMKSLFRQRLGPAQPFVL*ALGQGP Trigger: AGGGCCTTGGCCCAGAGCTCAGAGGACAAAGGGTTG...TGCTGGCCCCAGACGCTGCCTAAATAATGACTTCATTTGTGATCTTCCTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR GCA 90 bp | ATTTGCCACGGAAGAGGGGGAAGACCAGAGTCTCACAATTGCTGTGGATCTGTGGGGAGTTGTCGACCTTaGAGAAGGAAACTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICHGRGGRPESHNCCGSVGSCRP*RRKLRL Trigger: CAGCCTGAGTTTCCTTCTGCAAGGTCGACAACTCCC...CACAGATCCACAGCAATTGTGAGACTCTGGTCTTCCCCCTCTTCCGTGGCAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAAGGCCAGATCCAAGTTCAAGACATAAAACTCACTCCACTCCTCCTTACGGCCCTCATATGTCCTaGGCAGTGCAGCACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PERPDPSSRHKTHSTPPYGPHMS*AVQHLP Trigger: TGGAAGGTGCTGCACTGCTCAGGACATATGAGGGCC...GTAAGGAGGAGTGGAGTGAGTTTTATGTCTTGAACTTGGATCTGGCCTTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR GCA 90 bp | AGGGATGTGTCTCTGCTGGTAGAGTGCTTGATTGTCACGCACAAAGCTGGGGTTTTACTGCCTGGCCCTTaGTCAACAAAGTGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RDVSLLVECLIVTHKAGVLLPGP*STKCGC Trigger: GCATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAA...AACCCCAGCTTTGTGCGTGACAATCAAGCACTCTACCAGCAGAGACACATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGACCAGAGTCTCACAATTGCTGTGGATCTGTGCAATGCAGAGTGACTGAATCCAGACTGGCTGGGTaGGGGATGGCTTCACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GRPESHNCCGSVQCRVTESRLAG*GMASQI Trigger: TATCTGTGAAGCCATCCCCCACCCAGCCAGTCTGGA...TTCAGTCACTCTGCATTGCACAGATCCACAGCAATTGTGAGACTCTGGTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | AGGGATGTGTCTCTGCTGGTAGAGTGCTTGATTGTCACGCACAAAGCTGGGGTTCGGCTGATCAGGAAGTaGACGCAGATGATACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDVSLLVECLIVTHKAGVRLIRK*TQMILS Trigger: GGAAAGTATCATCTGCGTCCACTTCCTGATCAGCCG...AACCCCAGCTTTGTGCGTGACAATCAAGCACTCTACCAGCAGAGACACATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGCAGAGGGCATGAGAACCAGAGGATTTTTAAGAAGAGGCCTAGAACCAAAAGTGGCGCTCTGTTaGGGCTTCCAGCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAAEGMRTRGFLRRGLEPKVALC*GFQLLL Trigger: AAGAAGAAGCTGGAAGCCCCAACAGAGCGCCACTTT...TGGTTCTAGGCCTCTTCTTAAAAATCCTCTGGTTCTCATGCCCTCTGCTGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGTCTTTATGGTGGTTTTGGAGACATTTGTGGGTTTCTGGGCTATTGTCCTCTGAGCTCTaGGCCAAGGCCCTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NKERSLWWFWRHLWVSGLLSSEL*AKALFR Trigger: TCGGAAGAGGGCCTTGGCCCAGAGCTCAGAGGACAA...TAGCCCAGAAACCCACAAATGTCTCCAAAACCACCATAAAGACCTCTCCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CAA 72 bp | ACAGGGTTTCTCCATGTAGCCCTGGCATCCTGGAACTaGCTCGATAGATCAGCTGGCCTCAAACTTAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGFLHVALASWN*LDRSAGLKLRD Trigger: ATCTCTAAGTTTGAGGCCAGCTGATCTATCGAGCAAGTTCCAGGATGCCAGGGCTACATGGAGAAACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR GCA 90 bp | AACACAGGAAGATCACAAATGAAGTCATTATTTAGGCAGCGTCTGGGGCCAGCAATACTGCCCCGTTACTaGCTGGCCCTTGCTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: NTGRSQMKSLFRQRLGPAILPRY*LALAQQ Trigger: TTGTTGAGCAAGGGCCAGGCAGTAACGGGGCAGTAT...TGCTGGCCCCAGACGCTGCCTAAATAATGACTTCATTTGTGATCTTCCTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGTACAGTCTACAGCCAATGAAGCTCACAGGTTTCACATTCTAGAAACATTCATGTCCAGGCTGTaGCGACTGAGAAAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVVQSTANEAHRFHILETFMSRL*RLRKAP Trigger: AGGGGCCTTTCTCAGTCGCCACAGCCTGGACATGAA...TGTTTCTAGAATGTGAAACCTGTGAGCTTCATTGGCTGTAGACTGTACCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCTAGAATCAGAGAAAAGGCCAGAGAAGTGGCATGGTCTAGAACCAGAGCCACGGTCTTGTTTTTCTaGGCAGTGGAGAGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRIREKAREVAWSRTRATVLFF*AVESLC Trigger: GCACAGACTCTCCACTGCCCAGAAAAACAAGACCGT...GGCTCTGGTTCTAGACCATGCCACTTCTCTGGCCTTTTCTCTGATTCTAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR CCA 90 bp | AACACAGGAAGATCACAAATGAAGTCATTATTTAGGCAGCGTCTGGGGCCAGCATCGCTGGAGTTGAGCTaGAAGTCATCATCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGRSQMKSLFRQRLGPASLELS*KSSSME Trigger: CTCCATGGATGATGACTTCCAGCTCAACTCCAGCGA...TGCTGGCCCCAGACGCTGCCTAAATAATGACTTCATTTGTGATCTTCCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR CCA 90 bp | ACTTTAAAATGGCAGATTGGGAGCTGTGAGATCCAGCCCAAGAAAGAACTAAAGAAGCGGTTCCTGGGCTaGACAGTTTCCTCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKWQIGSCEIQPKKELKKRFLG*TVSSCW Trigger: CCAGCATGAGGAAACTGTCCAGCCCAGGAACCGCTT...CTTTAGTTCTTTCTTGGGCTGGATCTCACAGCTCCCAATCTGCCATTTTAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR CCA 90 bp | TACAGATTAGAAAGACCGGAGCTAATAAGAAGCTTGGAGTTGGGGAATCCAGAATTGCTCAACAAAGTGTaGATGCTCCTGCTGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRLERPELIRSLELGNPELLNKV*MLLLTA Trigger: TGCGGTCAGCAGGAGCATCCACACTTTGTTGAGCAA...TTCTGGATTCCCCAACTCCAAGCTTCTTATTAGCTCCGGTCTTTCTAATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CAA 72 bp | AGAACAGCAGCTCTCAATCTGTGGGCTGTGACCACTTaGAGGATCAGATATCAGATATCCTGCATACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTAALNLWAVTT*RIRYQISCIPD Trigger: ATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACAGCCCACAGATTGAGAGCTGCTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR CCA 90 bp | TCTGTTCTAGATTCAGGGTACTTTGAGTTGTTAAGATCTGAAGTAAAGAGGACTTGCCCCGTTACTGCCTaGCCCTTGCTCAACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLDSGYFELLRSEVKRTCPVTA*PLLNKV Trigger: CACTTTGTTGAGCAAGGGCCAGGCAGTAACGGGGCA...AGTCCTCTTTACTTCAGATCTTAACAACTCAAAGTACCCTGAATCTAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGTCTTTATGGTGGTTTTGGAGACATTTGTGGGTTTCTGGGCTATGTTTTTCTGGGCAGTaGAGAGTCTGTGCGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKERSLWWFWRHLWVSGLCFSGQ*RVCAHF Trigger: AAAATGCGCACAGACTCTCCACTGCCCAGAAAAACA...TAGCCCAGAAACCCACAAATGTCTCCAAAACCACCATAAAGACCTCTCCTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| 3UTR CAA 72 bp | TCTTACAGATTAGAAAGACCGGAGCTAATAAGAAGCTaGGAGTTGGGGAATCCAGAAACAAGAGGAGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SYRLERPELIRS*ELGNPETRGDR Trigger: GCGATCTCCTCTTGTTTCTGGATTCCCCAACTCCAAGCTTCTTATTAGCTCCGGTCTTTCTAATCTGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR CCA 90 bp | TGTGACCACTTTGAGGATCAGATATCAGATATCCTGCATACCAGATATTTACATACAGTTTCCTCATGCTaGCAGAGAGAGAGCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CDHFEDQISDILHTRYLHTVSSC*QRESSE Trigger: CTCGCTGCTCTCTCTCTGCCAGCATGAGGAAACTGT...ATGTAAATATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR TCA 90 bp | TGTGACCACTTTGAGGATCAGATATCAGATATCCTGCATACCAGATATTTACATATTGCTCGCTGGAGTTaGGCTGGAAGTCATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CDHFEDQISDILHTRYLHIARWS*AGSHHP Trigger: TGGATGATGACTTCCAGCTCAACTCCAGCGAGCAAT...ATGTAAATATCTGGTATGCAGGATATCTGATATCTGATCCTCAAAGTGGTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 72 bp | GGAAATTACAGAATAAGCCTTGAAGCTAGAGGATTCTaGGTGGTTGTAGGCTTTAGATCCAGAGAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GNYRISLEARGF*VVVGFRSRELY Trigger: GTAAAGCTCTCTGGATCTAAAGCCTACAACCACCAAGAATCCTCTAGCTTCAAGGCTTATTCTGTAATTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 72 bp | AAATATGGAGTCAGAGAGCCAGGGAAAAGCCATGGATaGTATGTTTTAGAACCAAGAAGTAGAAAGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYGVREPGKSHG*YVLEPRSRKSR Trigger: TCTAGACTTTCTACTTCTTGGTTCTAAAACATACAATCCATGGCTTTTCCCTGGCTCTCTGACTCCATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| 3UTR CAA 72 bp | TTTTCAAACTCTGTTCTAGATTCAGGGTACTTTGAGTaGTTAAGATCTGAAGTAAAGAGGACTGGGCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: FSNSVLDSGYFE*LRSEVKRTGQL Trigger: CAATTGCCCAGTCCTCTTTACTTCAGATCTTAACAACTCAAAGTACCCTGAATCTAGAACAGAGTTTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS CCA 90 bp | CAGCGGGGTAGTAGGGAGGGCTCAGGGATAGGAGGCGACAGGCCATaGAAGCTCCGAGCACGGGGCCTGCGGGCCACCCTGGGAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRGSREGSGIGGDRP*KLRARGLRATLGGL Trigger: CAGACCTCCCAGGGTGGCCCGCAGGCCCCGTGCTCGGAGCTTCCATGGCCTGTCGCCTCCTATCCCTGAGCCCTCCCTACTACCCCGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS GCA 90 bp | CGGCGAGGGTCAGCAGCCAGGGAGGCCTCACTCAGGGCCGGAGGGTaGAGGAAGGCCAGGATCCGCGGAGCAGGAGAGTCTACACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRGSAAREASLRAGG*RKARIRGAGESTLL Trigger: CAACAGTGTAGACTCTCCTGCTCCGCGGATCCTGGCCTTCCTGCACCCTCCGGCCCTGAGTGAGGCCTCCCTGGCTGCTGACCCTCGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS GCA 90 bp | TGGGGTGCTGGGCGTGGCAGCTGGGGGAGGTCCATCCAGGATGGGTaGCATGAGGCGGCGCAGGTCTGGACTACAGAAACGGCGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WGAGRGSWGRSIQDG*HEAAQVWTTETARV Trigger: GACCCTCGCCGTTTCTGTAGTCCAGACCTGCGCCGCCTCATGGCACCCATCCTGGATGGACCTCCCCCAGCTGCCACGCCCAGCACCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS TCA 90 bp | TGCTGGGCGTGGCAGCTGGGGGAGGTCCATCCAGGATGGGTGCCATaGGGCGGCGCAGGTCTGGACTACAGAAACGGCGAGGGTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWAWQLGEVHPGWVP*GGAGLDYRNGEGQQ Trigger: CTGCTGACCCTCGCCGTTTCTGTAGTCCAGACCTGCGCCGCCTCATGGCACCCATCCTGGATGGACCTCCCCCAGCTGCCACGCCCAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 90 bp | TGGGGGAGGTCCATCCAGGATGGGTGCCATGAGGCGGCGCAGGTCTaGACTACAGAAACGGCGAGGGTCAGCAGCCAGGGAGGCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: WGRSIQDGCHEAAQV*TTETARVSSQGGLT Trigger: AGTGAGGCCTCCCTGGCTGCTGACCCTCGCCGTTTCTGTAGTCCAGACCTGCGCCGCCTCATGGCACCCATCCTGGATGGACCTCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCCGCATGATGGAGGCCTaGTCCAGGTGCGCGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GERPHPGCRLLVWSVAESRMMEA*SRCALT Trigger: CGTCAGCGCGCACCTGGACAAGGCCTCCATCATGCG...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGGGTCTCCGTGTAGCTaGTGGGGTGCTGGGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPILGVGCWCGVWLSPFWGSPCS*WGAGRG Trigger: GCCACGCCCAGCACCCCACAAGCTACACGGAGACCC...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | TCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGGGGTCTCCGTGTAGCTaGTGGGGTGCTGGGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEERGPILGVGCWCGVWLGSPCS*WGAGRG Trigger: GCCACGCCCAGCACCCCACAAGCTACACGGAGACCC...CAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 90 bp | TGGGTCTGGCCCAAGCCTGCTGCTGGCGGGAAGCGGTTCCTGGGCTaGACAGTTTCCTCATGCTGGCAGAGAGAGAGCAGCGAGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WVWPKPAAGGKRFLG*TVSSCWQRESSEGA Trigger: AGCTCCCTCGCTGCTCTCTCTCTGCCAGCATGAGGAAACTGTCCAGCCCAGGAACCGCTTCCCGCCAGCAGCAGGCTTGGGCCAGACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTCCAGGTGGCCGCTTaGAGGTTGAGCGTGCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GERPHPGCRLLVWSVAESFQVAA*RLSVRP Trigger: AGGGCGCACGCTCAACCTCAAAGCGGCCACCTGGAA...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 90 bp | AAGCTCCGAGCACGGGGCCTGCGGGCCACCCTGGGAGGTCTGCGGTaGACTTTGGGCAATTGCTCGCTGGAGTTGAGCTGGAAGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KLRARGLRATLGGLR*TLGNCSLELSWKSS Trigger: TGATGACTTCCAGCTCAACTCCAGCGAGCAATTGCCCAAAGTCCACCGCAGACCTCCCAGGGTGGCCCGCAGGCCCCGTGCTCGGAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | GAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCGCATGATGGAGGCCTaGTCCAGGTGCGCGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: ERPHPGCRLLVWSVAESFRMMEA*SRCALT Trigger: CGTCAGCGCGCACCTGGACAAGGCCTCCATCATGCG...AAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCCTGAGGCCCAGGTGCTaGCTGACATTTTCCGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GERPHPGCRLLVWSVAESLRPRC*LTFSDR Trigger: CCTGTCGGAAAATGTCAGCAAGCACCTGGGCCTCAG...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGATAAGCACCAGGCATaGCAGGGGAGGCTCGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLRGERPHPGCRLLVWSVDKHQA*QGRLGA Trigger: CGCTCCGAGCCTCCCCTGCAATGCCTGGTGCTTATC...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS GCA 90 bp | CAGATAGCCTCCAGTCCGGGCCAGGAAGCGATACTGCCCCGTTACTaGCTGGCCCTTGCTCAACAAAGTGTGGATGCTCCTGCTGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: QIASSPGQEAILPRY*LALAQQSVDAPADR Trigger: GCGGTCAGCAGGAGCATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAACGGGGCAGTATCGCTTCCTGGCCCGGACTGGAGGCTATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS GCA 90 bp | ATCCGCGGAGCAGGAGAGTCTACACTGTTGCCAGGGATACCCTTCTaGGAGGAGGCACTCAGCCGAGGGGGTCTGCGAGTATGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IRGAGESTLLPGIPF*EEALSRGGLRVCCS Trigger: GGAGCAACATACTCGCAGACCCCCTCGGCTGAGTGCCTCCTCGCAGAAGGGTATCCCTGGCAACAGTGTAGACTCTCCTGCTCCGCGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | GGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGGGGGTCAGGGCGTCTaGAAGTTCCTCTTGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GPILGVGCWCGVWLSPFWGGQGV*KFLLVT Trigger: TGTGACCAAGAGGAACTTCAAGACGCCCTGACCCCC...CCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCC 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCCGGGAGTTGTCGACCTaGCAGAAGGAAACTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GERPHPGCRLLVWSVAESRELST*QKETQA Trigger: AGCCTGAGTTTCCTTCTGCAAGGTCGACAACTCCCG...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS CCA 90 bp | AAGCCCACTGTCAACTTATCTGGGAGATCAGCCGGAAGAGGACTTTaGGGTCTCCGTGTAGCTTGTGGGGTGCTGGGCGTGGCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KPTVNLSGRSAGRGL*GLRVACGVLGVAAG Trigger: CCCAGCTGCCACGCCCAGCACCCCACAAGCTACACGGAGACCCCAAAGTCCTCTTCCGGCTGATCTCCCAGATAAGTTGACAGTGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGCTGAGGCCCAGGTGCTaGCTGACATTTTCCGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLRGERPHPGCRLLVWSVLRPRC*LTFSDR Trigger: CCTGTCGGAAAATGTCAGCAAGCACCTGGGCCTCAG...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCGGGTCTGCGAGTATGTaGCTCCGTTTGTTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GERPHPGCRLLVWSVAESGSASM*LRLFQR Trigger: TCTCTGGAACAAACGGAGCAACATACTCGCAGACCC...GGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS GCA 90 bp | CCCTTCTGCGAGGAGGCACTCAGCCGAGGGGGTCTGCGAGTATGTTaGTCCGTTTGTTCCAGAGACAGCACCACTCCGGTCTCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: PFCEEALSRGGLRVC*SVCSRDSTTPVSST Trigger: TGTAGAAGAGACCGGAGTGGTGCTGTCTCTGGAACAAACGGAGCAACATACTCGCAGACCCCCTCGGCTGAGTGCCTCCTCGCAGAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 90 bp | GGCGCTCTGTTGGGGCTTCCAGCTTCTTCTTTGACAGGTTCGGCCTaGGGGTCAGGGCGTCTTGAAGTTCCTCTTGGTCACAGGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GALLGLPASSLTGSA*GSGRLEVPLGHRDG Trigger: TCCATCCCTGTGACCAAGAGGAACTTCAAGACGCCCTGACCCCCAGGCCGAACCTGTCAAAGAAGAAGCTGGAAGCCCCAACAGAGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 90 bp | GTGCGCCCTCTGCTGGTGAGCGTGCTCTTCATTCGCAGGGAAAAGTaGCGCTCTGTTGGGGCTTCCAGCTTCTTCTTTGACAGGTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRPLLVSVLFIRREK*RSVGASSFFFDRFG Trigger: GCCGAACCTGTCAAAGAAGAAGCTGGAAGCCCCAACAGAGCGCCACTTTTCCCTGCGAATGAAGAGCACGCTCACCAGCAGAGGGCGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | ATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAGATAAGCACCAGGCATaGCAGGGGAGGCTCGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ILGVGCWCGVWLSPFWDRDKHQA*QGRLGA Trigger: CGCTCCGAGCCTCCCCTGCAATGCCTGGTGCTTATC...TCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTGGAGAGTCTACACTGTaGCCAGGGATACCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERPHPGCRLLVWSVAESFGESTL*PGIPFC Trigger: GCAGAAGGGTATCCCTGGCAACAGTGTAGACTCTCC...AAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGTTACTGCCTGGCCCTaGCTCAACAAAGTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLRGERPHPGCRLLVWSVVTAWP*LNKVWM Trigger: CATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAAC...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGGAATTGCTCGCTGGAGTaGAGCTGGAAGTCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HSEERGPILGVGCWCGVWNCSLE*SWKSSS Trigger: GGATGATGACTTCCAGCTCAACTCCAGCGAGCAATT...CCACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGAGGAGAGAGGCCCCATCCTGGGTGTAGGCTGCTGGTGTGGAGTGTGAGTATGTTGCTCCGTTaGTTCCAGAGACAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLRGERPHPGCRLLVWSVSMLLR*FQRQHH Trigger: GTGGTGCTGTCTCTGGAACAAACGGAGCAACATACT...CACACTCCACACCAGCAGCCTACACCCAGGATGGGGCCTCTCTCCTCTGAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGTGTAGGCTGCTGGTGTGGAGTGTGGCTGAGTCCTTTCTGGGATAGAAGAGTTACTGCCTGGCCCTaGCTCAACAAAGTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGVGCWCGVWLSPFWDRRVTAWP*LNKVWM Trigger: CATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAAC...TCTTCTATCCCAGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS TCA 90 bp | CCGTTACTGCCTGGCCCTTGCTCAACAAAGTGTGGATGCTCCTGCTaGCCGCATCAGAGTCCAAAGCGTGGATGTATTCATAGGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLLPGPCSTKCGCSC*PHQSPKRGCIHRQN Trigger: GTTCTGCCTATGAATACATCCACGCTTTGGACTCTGATGCGGTCAGCAGGAGCATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 90 bp | AGTGGAGAGTCTGTGCGCATTTTCCAAGCCCACTGTCAACTTATCTaGGAGATCAGCCGGAAGAGGACTTTGGGGTCTCCGTGTAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGESVRIFQAHCQLI*EISRKRTLGSPCSL Trigger: CAAGCTACACGGAGACCCCAAAGTCCTCTTCCGGCTGATCTCCCAGATAAGTTGACAGTGGGCTTGGAAAATGCGCACAGACTCTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | CTGGTGGTACAGTCTACAGCCAATGAAGCTCACAGGTTTCACATTCTAGAAACATTCCAGGTGGCCGCTTaGAGGTTGAGCGTGCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVVQSTANEAHRFHILETFQVAA*RLSVRP Trigger: AGGGCGCACGCTCAACCTCAAAGCGGCCACCTGGAA...TGTTTCTAGAATGTGAAACCTGTGAGCTTCATTGGCTGTAGACTGTACCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | AGTCTCCAACACCACATACAACTAGGCATGTCTGTAACCCCAGCACTTGGTGGGGGGTCTGCGAGTATGTaGCTCCGTTTGTTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLQHHIQLGMSVTPALGGGSASM*LRLFQR Trigger: TCTCTGGAACAAACGGAGCAACATACTCGCAGACCC...CCCACCAAGTGCTGGGGTTACAGACATGCCTAGTTGTATGTGGTGTTGGAGACT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTTGAGAGGCAGAGGGAAGAGGGTCACAAGTTCAAGGTCATCTCTGGCAATTGCTCGCTGGAGTaGAGCTGGAAGTCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AAFERQREEGHKFKVISGNCSLE*SWKSSS Trigger: GGATGATGACTTCCAGCTCAACTCCAGCGAGCAATT...GCCAGAGATGACCTTGAACTTGTGACCCTCTTCCCTCTGCCTCTCAAATGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | GATTTTGAGACAGGGTTTCTCCATGTAGCCCTGGCATCCTGGAACTTGCTCGATCGGGAGTTGTCGACCTaGCAGAAGGAAACTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DFETGFLHVALASWNLLDRELST*QKETQA Trigger: AGCCTGAGTTTCCTTCTGCAAGGTCGACAACTCCCG...ATCGAGCAAGTTCCAGGATGCCAGGGCTACATGGAGAAACCCTGTCTCAAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
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| CDS CCA 90 bp | GAGCTATATCTAGATCTGTCTCCACGGTCTTGTTTTTCTGGGCAGTaGAGAGTCTGTGCGCATTTTCCAAGCCCACTGTCAACTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELYLDLSPRSCFSGQ*RVCAHFPSPLSTYL Trigger: CAGATAAGTTGACAGTGGGCTTGGAAAATGCGCACAGACTCTCCACTGCCCAGAAAAACAAGACCGTGGAGACAGATCTAGATATAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS-3UTR CAA 90 bp | TACAGATTAGAAAGACCGGAGCTAATAAGAAGCTTGGAGTTGGGGAATCCAGAAGGAGAGTCTACACTGTaGCCAGGGATACCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YRLERPELIRSLELGNPEGESTL*PGIPFC Trigger: GCAGAAGGGTATCCCTGGCAACAGTGTAGACTCTCC...TTCTGGATTCCCCAACTCCAAGCTTCTTATTAGCTCCGGTCTTTCTAATCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTAAAATGGCAGATTGGGAGCTGTGAGATCCAGCCCAAGAAAGAACTAAAGAGTATGTTGCTCCGTTaGTTCCAGAGACAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKWQIGSCEIQPKKELKSMLLR*FQRQHH Trigger: GTGGTGCTGTCTCTGGAACAAACGGAGCAACATACT...CTTTAGTTCTTTCTTGGGCTGGATCTCACAGCTCCCAATCTGCCATTTTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108492.9 |
||
| CDS GCA 72 bp | GAGGCGACAGGCCATGGAAGCTCCGAGCACGGGGCCTaGGGGCCACCCTGGGAGGTCTGCGGTGGACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: EATGHGSSEHGA*GPPWEVCGGLW Trigger: CCAAAGTCCACCGCAGACCTCCCAGGGTGGCCCGCAGGCCCCGTGCTCGGAGCTTCCATGGCCTGTCGCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | AGTAGGGAGGGCTCAGGGATAGGAGGCGACAGGCCATaGAAGCTCCGAGCACGGGGCCTGCGGGCCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SREGSGIGGDRP*KLRARGLRATL Trigger: CAGGGTGGCCCGCAGGCCCCGTGCTCGGAGCTTCCATGGCCTGTCGCCTCCTATCCCTGAGCCCTCCCTACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS GCA 72 bp | GGGTGGGGGATGGCTTCACAGATAAGCACCAGGCATTaGAGGGGAGGCTCGGAGCGAGGGCTCCCGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GWGMASQISTRH*RGGSERGLPAG Trigger: CCCTGCCGGGAGCCCTCGCTCCGAGCCTCCCCTGCAATGCCTGGTGCTTATCTGTGAAGCCATCCCCCACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS GCA 72 bp | GGGCGTGGCAGCTGGGGGAGGTCCATCCAGGATGGGTaGCATGAGGCGGCGCAGGTCTGGACTACAGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: GRGSWGRSIQDG*HEAAQVWTTET Trigger: CGTTTCTGTAGTCCAGACCTGCGCCGCCTCATGGCACCCATCCTGGATGGACCTCCCCCAGCTGCCACGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | TCTCCGTGTAGCTTGTGGGGTGCTGGGCGTGGCAGCTaGGGGAGGTCCATCCAGGATGGGTGCCATGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SPCSLWGAGRGS*GRSIQDGCHEA Trigger: CGCCTCATGGCACCCATCCTGGATGGACCTCCCCCAGCTGCCACGCCCAGCACCCCACAAGCTACACGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS TCA 72 bp | TGGCAGCTGGGGGAGGTCCATCCAGGATGGGTGCCATaGGGCGGCGCAGGTCTGGACTACAGAAACGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: WQLGEVHPGWVP*GGAGLDYRNGE Trigger: CTCGCCGTTTCTGTAGTCCAGACCTGCGCCGCCTCATGGCACCCATCCTGGATGGACCTCCCCCAGCTGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | TCCATCCAGGATGGGTGCCATGAGGCGGCGCAGGTCTaGACTACAGAAACGGCGAGGGTCAGCAGCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SIQDGCHEAAQV*TTETARVSSQG Trigger: TCCCTGGCTGCTGACCCTCGCCGTTTCTGTAGTCCAGACCTGCGCCGCCTCATGGCACCCATCCTGGATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | CCCAAGCCTGCTGCTGGCGGGAAGCGGTTCCTGGGCTaGACAGTTTCCTCATGCTGGCAGAGAGAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PKPAAGGKRFLG*TVSSCWQRESS Trigger: GCTGCTCTCTCTCTGCCAGCATGAGGAAACTGTCCAGCCCAGGAACCGCTTCCCGCCAGCAGCAGGCTTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 72 bp | GGCCTGCGGGCCACCCTGGGAGGTCTGCGGTGGACTTaGGGCAATTGCTCGCTGGAGTTGAGCTGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLRATLGGLRWT*GNCSLELSWKS Trigger: TGACTTCCAGCTCAACTCCAGCGAGCAATTGCCCAAAGTCCACCGCAGACCTCCCAGGGTGGCCCGCAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 90 bp | CGAGCACGGGGCCTGCGGGCCACCCTGGGAGGTCTGCGGTGGACTTaGGGCAATTGCTCGCTGGAGTTGAGCTGGAAGTCATCATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RARGLRATLGGLRWT*GNCSLELSWKSSSM Trigger: CATGGATGATGACTTCCAGCTCAACTCCAGCGAGCAATTGCCCAAAGTCCACCGCAGACCTCCCAGGGTGGCCCGCAGGCCCCGTGCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 90 bp | CTTGGGGACCGCTTGGGCGGCTTAGTTTCCAGCAGCTCCAACCCTTaGTCCTCTGAGCTCTGGGCCAAGGCCCTCTTCCGAGTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGDRLGGLVSSSSNP*SSELWAKALFRVPG Trigger: GCCTGGAACTCGGAAGAGGGCCTTGGCCCAGAGCTCAGAGGACAAAGGGTTGGAGCTGCTGGAAACTAAGCCGCCCAAGCGGTCCCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS GCA 72 bp | CAGGCGTCCAGTGGCTCTCCCCCTTTTTCCACCTGCTaGGCAGAGGCGGTGCATGCGCAGGTAGCTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: QASSGSPPFSTC*AEAVHAQVADC Trigger: ACAATCAGCTACCTGCGCATGCACCGCCTCTGCGCAGCAGGTGGAAAAAGGGGGAGAGCCACTGGACGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153833.2 |
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| CDS CCA 72 bp | TCTGGCCCAAGCCTGCTGCTGGCGGGAAGCGGTTCCTaGGCTGGACAGTTTCCTCATGCTGGCAGAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGPSLLLAGSGS*AGQFPHAGRER Trigger: TCTCTCTCTGCCAGCATGAGGAAACTGTCCAGCCCAGGAACCGCTTCCCGCCAGCAGCAGGCTTGGGCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS GCA 72 bp | GAGGAGGCACTCAGCCGAGGGGGTCTGCGAGTATGTTaGTCCGTTTGTTCCAGAGACAGCACCACTCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EEALSRGGLRVC*SVCSRDSTTPV Trigger: GACCGGAGTGGTGCTGTCTCTGGAACAAACGGAGCAACATACTCGCAGACCCCCTCGGCTGAGTGCCTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | GTCCGGGCCAGGAAGCGATACTGCCCCGTTACTGCCTaGCCCTTGCTCAACAAAGTGTGGATGCTCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRARKRYCPVTA*PLLNKVWMLLL Trigger: CAGCAGGAGCATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAACGGGGCAGTATCGCTTCCTGGCCCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 90 bp | CAAGCCCACTGTCAACTTATCTGGGAGATCAGCCGGAAGAGGACTTaGGGGTCTCCGTGTAGCTTGTGGGGTGCTGGGCGTGGCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QAHCQLIWEISRKRT*GSPCSLWGAGRGSW Trigger: CCAGCTGCCACGCCCAGCACCCCACAAGCTACACGGAGACCCCAAAGTCCTCTTCCGGCTGATCTCCCAGATAAGTTGACAGTGGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS TCA 72 bp | AGTCTGTGCAGGGGGCTTGTAGGCCCTCATATGTCCTaGGCAGTGCAGCACCTTCCAGGTGGCCGCTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLCRGLVGPHMS*AVQHLPGGRFE Trigger: CTCAAAGCGGCCACCTGGAAGGTGCTGCACTGCTCAGGACATATGAGGGCCTACAAGCCCCCTGCACAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS CCA 72 bp | ACCACTCCGGTCTCTTCTACACGGCTGATCAGGAAGTaGACGCAGATGATACTTTCCGACTGGGGGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TTPVSSTRLIRK*TQMILSDWGPR Trigger: GCGGGGCCCCCAGTCGGAAAGTATCATCTGCGTCCACTTCCTGATCAGCCGTGTAGAAGAGACCGGAGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 72 bp | GCCAGGAAGCGATACTGCCCCGTTACTGCCTGGCCCTaGCTCAACAAAGTGTGGATGCTCCTGCTGACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARKRYCPVTAWP*LNKVWMLLLTA Trigger: TGCGGTCAGCAGGAGCATCCACACTTTGTTGAGCAAGGGCCAGGCAGTAACGGGGCAGTATCGCTTCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 90 bp | CGAGGAGGCACTCAGCCGAGGGGGTCTGCGAGTATGTTGCTCCGTTaGTTCCAGAGACAGCACCACTCCGGTCTCTTCTACACGGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RGGTQPRGSASMLLR*FQRQHHSGLFYTAD Trigger: ATCAGCCGTGTAGAAGAGACCGGAGTGGTGCTGTCTCTGGAACAAACGGAGCAACATACTCGCAGACCCCCTCGGCTGAGTGCCTCCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS CAA 90 bp | ACCCTTCTGCGAGGAGGCACTCAGCCGAGGGGGTCTGCGAGTATGTaGCTCCGTTTGTTCCAGAGACAGCACCACTCCGGTCTCTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: TLLRGGTQPRGSASM*LRLFQRQHHSGLFY Trigger: GTAGAAGAGACCGGAGTGGTGCTGTCTCTGGAACAAACGGAGCAACATACTCGCAGACCCCCTCGGCTGAGTGCCTCCTCGCAGAAGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS CAA 90 bp | AGCGGAGGCAGCAGGAAGCTTCCAGGTTCTAGTCTTGGGGACCGCTaGGGCGGCTTAGTTTCCAGCAGCTCCAACCCTTTGTCCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGGSRKLPGSSLGDR*GGLVSSSSNPLSSE Trigger: CTCAGAGGACAAAGGGTTGGAGCTGCTGGAAACTAAGCCGCCCAAGCGGTCCCCAAGACTAGAACCTGGAAGCTTCCTGCTGCCTCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS TCA 72 bp | AAAGTGGCGCTCTGTTGGGGCTTCCAGCTTCTTCTTTaGCAGGTTCGGCCTGGGGGTCAGGGCGTCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KVALCWGFQLLL*QVRPGGQGVLK Trigger: CTTCAAGACGCCCTGACCCCCAGGCCGAACCTGTCAAAGAAGAAGCTGGAAGCCCCAACAGAGCGCCACTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS TCA 72 bp | CCGGGAGTTGTCGACCTTGCAGAAGGAAACTCAGGCTaGGCGGAGGCAGCAGGAAGCTTCCAGGTTCTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGVVDLAEGNSG*AEAAGSFQVLV Trigger: GACTAGAACCTGGAAGCTTCCTGCTGCCTCCGCTCAGCCTGAGTTTCCTTCTGCAAGGTCGACAACTCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS GCA 72 bp | TACCCTTCTGCGAGGAGGCACTCAGCCGAGGGGGTCTaGGAGTATGTTGCTCCGTTTGTTCCAGAGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YPSARRHSAEGV*EYVAPFVPETA Trigger: TGCTGTCTCTGGAACAAACGGAGCAACATACTCGCAGACCCCCTCGGCTGAGTGCCTCCTCGCAGAAGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
||
| CDS GCA 72 bp | GCCACCCTGGGAGGTCTGCGGTGGACTTTGGGCAATTaGTCGCTGGAGTTGAGCTGGAAGTCATCATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ATLGGLRWTLGN*SLELSWKSSSM Trigger: CATGGATGATGACTTCCAGCTCAACTCCAGCGAGCAATTGCCCAAAGTCCACCGCAGACCTCCCAGGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | GTCAACTTATCTGGGAGATCAGCCGGAAGAGGACTTTaGGGTCTCCGTGTAGCTTGTGGGGTGCTGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VNLSGRSAGRGL*GLRVACGVLGV Trigger: CACGCCCAGCACCCCACAAGCTACACGGAGACCCCAAAGTCCTCTTCCGGCTGATCTCCCAGATAAGTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 72 bp | GGCCACCCTGGGAGGTCTGCGGTGGACTTTGGGCAATaGCTCGCTGGAGTTGAGCTGGAAGTCATCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: GHPGRSAVDFGQ*LAGVELEVIIH Trigger: ATGGATGATGACTTCCAGCTCAACTCCAGCGAGCAATTGCCCAAAGTCCACCGCAGACCTCCCAGGGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | TTGGGGCTTCCAGCTTCTTCTTTGACAGGTTCGGCCTaGGGGTCAGGGCGTCTTGAAGTTCCTCTTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LGLPASSLTGSA*GSGRLEVPLGH Trigger: GTGACCAAGAGGAACTTCAAGACGCCCTGACCCCCAGGCCGAACCTGTCAAAGAAGAAGCTGGAAGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 72 bp | GCGTGCTCTTCATTCGCAGGGAAAAGTGGCGCTCTGTaGGGGCTTCCAGCTTCTTCTTTGACAGGTTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ACSSFAGKSGAL*GLPASSLTGSA Trigger: GGCCGAACCTGTCAAAGAAGAAGCTGGAAGCCCCAACAGAGCGCCACTTTTCCCTGCGAATGAAGAGCACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CAA 72 bp | TGTCAACTTATCTGGGAGATCAGCCGGAAGAGGACTTaGGGGTCTCCGTGTAGCTTGTGGGGTGCTGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: CQLIWEISRKRT*GSPCSLWGAGR Trigger: ACGCCCAGCACCCCACAAGCTACACGGAGACCCCAAAGTCCTCTTCCGGCTGATCTCCCAGATAAGTTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS TCA 72 bp | GGGGTTATGTATCAGGGAGGAGGAACAGAGGTCCACTaGCTGAGGCCCAGGTGCTTGCTGACATTTTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: GVMYQGGGTEVH*LRPRCLLTFSD Trigger: GTCGGAAAATGTCAGCAAGCACCTGGGCCTCAGTCAGTGGACCTCTGTTCCTCCTCCCTGATACATAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153833.2 |
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| CDS CCA 72 bp | CTGCTGGTGAGCGTGCTCTTCATTCGCAGGGAAAAGTaGCGCTCTGTTGGGGCTTCCAGCTTCTTCTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLVSVLFIRREK*RSVGASSFFFD Trigger: GTCAAAGAAGAAGCTGGAAGCCCCAACAGAGCGCCACTTTTCCCTGCGAATGAAGAGCACGCTCACCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS TCA 72 bp | CCTGGCCCTTGCTCAACAAAGTGTGGATGCTCCTGCTaGCCGCATCAGAGTCCAAAGCGTGGATGTATTCAT | + |
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Preference number: 6 (lower is better) Translates to: PGPCSTKCGCSC*PHQSPKRGCIH Trigger: ATGAATACATCCACGCTTTGGACTCTGATGCGGTCAGCAGGAGCATCCACACTTTGTTGAGCAAGGGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS TCA 72 bp | TTCTTTGACAGGTTCGGCCTGGGGGTCAGGGCGTCTTaGAGTTCCTCTTGGTCACAGGGATGGATAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: FFDRFGLGVRAS*SSSWSQGWIKS Trigger: TGATTTTATCCATCCCTGTGACCAAGAGGAACTTCAAGACGCCCTGACCCCCAGGCCGAACCTGTCAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS GCA 72 bp | TCCACGGTCTTGTTTTTCTGGGCAGTGGAGAGTCTGTaGGCATTTTCCAAGCCCACTGTCAACTTATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: STVLFFWAVESL*AFSKPTVNLSG Trigger: CCCAGATAAGTTGACAGTGGGCTTGGAAAATGCGCACAGACTCTCCACTGCCCAGAAAAACAAGACCGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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| CDS CCA 72 bp | GCTATATCTAGATCTGTCTCCACGGTCTTGTTTTTCTaGGCAGTGGAGAGTCTGTGCGCATTTTCCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: AISRSVSTVLFF*AVESLCAFSKP Trigger: GGGCTTGGAAAATGCGCACAGACTCTCCACTGCCCAGAAAAACAAGACCGTGGAGACAGATCTAGATATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037762.11 ENSMUST00000108492.9 |
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