Pregenerated sensors for HIF1AN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036450Ensembl transcript IDs: ENSMUST00000040455.5
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCTGACCACCGGGCCCTTTCTCTTGTCCACCACCCCAGCCTTCTaGATGGGAGGCCTCCGCTCTCGCACCACACCACACCACTCAACG | + |
|
Preference number: 1 (lower is better) Translates to: KLTTGPFLLSTTPAF*MGGLRSRTTPHHST Trigger: CGTTGAGTGGTGTGGTGTGGTGCGAGAGCGGAGGCCTCCCATGCAGAAGGCTGGGGTGGTGGACAAGAGAAAGGGCCCGGTGGTCAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 90 bp | ATGAATCGGGTTACCAGAGCTTCCTCTCAGCATGCAGAGGTGTGGTaGGAGGAGCTACAGGACCTACAGCACCCCTTTCCCCCGCAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: MNRVTRASSQHAEVW*EELQDLQHPFPPQG Trigger: GCCCTGCGGGGGAAAGGGGTGCTGTAGGTCCTGTAGCTCCTCTCACCACACCTCTGCATGCTGAGAGGAAGCTCTGGTAACCCGATTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 90 bp | ACCAGGAACAGCCATGACATCATCCCAGCATCAGGGCCAATCCTGTaGTGGTGCCTAAGCTCACCTTCTCTCTCGCTGCCCTCAGCCACC | + |
|
Preference number: 1 (lower is better) Translates to: TRNSHDIIPASGPIL*WCLSSPSLSLPSAT Trigger: GGTGGCTGAGGGCAGCGAGAGAGAAGGTGAGCTTAGGCACCATCACAGGATTGGCCCTGATGCTGGGATGATGTCATGGCTGTTCCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 90 bp | GGCTTCGCTAACCACAGGCCCATGGGCCTTGAGGACACCAGTTTCTaGGCCTCTGTTCCTCCAGAAACGTCCCCAAAGTGCTCAATGGGG | + |
|
Preference number: 1 (lower is better) Translates to: GFANHRPMGLEDTSF*ASVPPETSPKCSMG Trigger: CCCCATTGAGCACTTTGGGGACGTTTCTGGAGGAACAGAGGCTCAGAAACTGGTGTCCTCAAGGCCCATGGGCCTGTGGTTAGCGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | TCTGGGGCTCAAGAGGCAAGGGTGAGAAACCTTTCCAAATGGGAGTaGAGTCAACTACCCTGCCTTGCCTCAGACACCTGCCTCCAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: SGAQEARVRNLSKWE*SQLPCLASDTCLQG Trigger: GCCCTGGAGGCAGGTGTCTGAGGCAAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAAGGTTTCTCACCCTTGCCTCTTGAGCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | ACAGACCCTGTGGAGAGGGATCCTCCAGCCAGGCTGCCCAGCACTTaGAGCCAGAGAGCGTCTTTGAGGAAAAGAGCCTTGGTAAAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: TDPVERDPPARLPST*SQRASLRKRALVKR Trigger: CCTCTTTACCAAGGCTCTTTTCCTCAAAGACGCTCTCTGGCTCCAAGTGCTGGGCAGCCTGGCTGGAGGATCCCTCTCCACAGGGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | GCAAGGGTGAGAAACCTTTCCAAATGGGAGTGGAGTCAACTACCCTaGCTTGCCTCAGACACCTGCCTCCAGGGCCATGGCAAGAGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: ARVRNLSKWEWSQLP*LASDTCLQGHGKSP Trigger: TGGACTCTTGCCATGGCCCTGGAGGCAGGTGTCTGAGGCAAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAAGGTTTCTCACCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 90 bp | CAACCGAGCAGATCCAGACTCCCTGCCACACATCCCAGACACCTTTaGGGGCAGAGCCAGGACCATAGATCTGCGGAGAATGAAAATCCG | + |
|
Preference number: 1 (lower is better) Translates to: QPSRSRLPATHPRHL*GQSQDHRSAENENP Trigger: CGGATTTTCATTCTCCGCAGATCTATGGTCCTGGCTCTGCCCTCAAAGGTGTCTGGGATGTGTGGCAGGGAGTCTGGATCTGCTCGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 90 bp | ACTATACTCAGTCTCTTGAGGCATGGAGAGTCATCGGTGAGAAGCTaGCCACCGGGCCCTTTCTCTTGTCCACCACCCCAGCCTTCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: TILSLLRHGESSVRS*PPGPFSCPPPQPSA Trigger: TGCAGAAGGCTGGGGTGGTGGACAAGAGAAAGGGCCCGGTGGTCAGCTTCTCACCGATGACTCTCCATGCCTCAAGAGACTGAGTATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | CTCCCTCTTCTGCTGCATCCCTCGTTCCCAAAAGAGATGGAGGCATaGGTTTGCCGCGATCACACTGCCCAGCACGGGCTGTATTTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: LPLLLHPSFPKEMEA*VCRDHTAQHGLYLK Trigger: CTTTAAATACAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTTGGGAACGAGGGATGCAGCAGAAGAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | GGCCCAGCAGAATATGAATCGGGTTACCAGAGCTTCCTCTCAGCATaGAGAGGTGTGGTGAGAGGAGCTACAGGACCTACAGCACCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: GPAEYESGYQSFLSA*RGVVRGATGPTAPL Trigger: AAGGGGTGCTGTAGGTCCTGTAGCTCCTCTCACCACACCTCTGCATGCTGAGAGGAAGCTCTGGTAACCCGATTCATATTCTGCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | CTTCTGCTGCATCCCTCGTTCCCAAAAGAGATGGAGGCATGCGTTTaGCGCGATCACACTGCCCAGCACGGGCTGTATTTAAAGAGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: LLLHPSFPKEMEACV*RDHTAQHGLYLKSH Trigger: ATGGCTCTTTAAATACAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTTGGGAACGAGGGATGCAGCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | TCCCAGACAGCCTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTaGACATACCTAGGCTCTGCTACTCTTCATACGGTTTCCTTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: SQTACAGPALPHTPP*TYLGSATLHTVSFP Trigger: TGGAAAGGAAACCGTATGAAGAGTAGCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAGGCTGTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | TCATGGAAAACAGAGCTCGCTCCTGCCACCCTGCTTTCCCAAGCCTaGCCTCTTTCTCCAAGTCTCTCACCAAGTCCTTCACCTCTCCAA | + |
|
Preference number: 1 (lower is better) Translates to: SWKTELAPATLLSQA*PLSPSLSPSPSPLQ Trigger: TTGGAGAGGTGAAGGACTTGGTGAGAGACTTGGAGAAAGAGGCCAGGCTTGGGAAAGCAGGGTGGCAGGAGCGAGCTCTGTTTTCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | CTGCCTCCAGGGCCATGGCAAGAGTCCAGTCCATTAAGTGCAGCGTaGAATACTAGTGCTTGGAGTGTCCTGTCCTCATCAACGAAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: LPPGPWQESSPLSAA*NTSAWSVLSSSTKH Trigger: ATGCTTCGTTGATGAGGACAGGACACTCCAAGCACTAGTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCATGGCCCTGGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | GAGGGCTCAGGCAGAAAGATGTCTGTTTGCAAACCCACCTCAAGCTaGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACA | + |
|
Preference number: 1 (lower is better) Translates to: EGSGRKMSVCKPTSS*AWTPVYEGIQTPPT Trigger: TGTGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGGGTTTGCAAACAGACATCTTTCTGCCTGAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 90 bp | GTCTGTTTGCAAACCCACCTCAAGCTGGGCCTGGACTCCAGTCTATaGAGGCATACAAACTCCACCCACACTTGTGGGAACTCCAAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: VCLQTHLKLGLDSSL*RHTNSTHTCGNSKR Trigger: CCTTTTGGAGTTCCCACAAGTGTGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGGGTTTGCAAACAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | CTCGTTCCCAAAAGAGATGGAGGCATGCGTTTGCCGCGATCACACTaGCCAGCACGGGCTGTATTTAAAGAGCCATACTCAAGAAGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: LVPKRDGGMRLPRSH*PARAVFKEPYSRRY Trigger: GTACCTTCTTGAGTATGGCTCTTTAAATACAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTTGGGAACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | TGGACCAGCTCTTCCTCACACCCCTCCTTGCACATACCTAGGCTCTaGTACTCTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: WTSSSSHPSLHIPRL*YSSYGFLSNFHQCL Trigger: CAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAGAGTAGCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | CCACACAAGCTCAAGTGCTTCGAAGTGACAGATCCCTGTCACAGGTaGGGCGCAACAGTGCTGACTACTACAGAGATCCTTCCTGTAACT | + |
|
Preference number: 1 (lower is better) Translates to: PHKLKCFEVTDPCHR*GATVLTTTEILPVT Trigger: AGTTACAGGAAGGATCTCTGTAGTAGTCAGCACTGTTGCGCCCCACCTGTGACAGGGATCTGTCACTTCGAAGCACTTGAGCTTGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | ATGGTAAGACAACGGCCCAGCATGGAAAGACTGAGGAATGGTAAGTaGACAGAGCAGACGGACATAGCAACTCAGCAGGGACACAGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: MVRQRPSMERLRNGK*TEQTDIATQQGHSN Trigger: GTTGCTGTGTCCCTGCTGAGTTGCTATGTCCGTCTGCTCTGTCCACTTACCATTCCTCAGTCTTTCCATGCTGGGCCGTTGTCTTACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 90 bp | CCCTCTTGCCTGAGTCTACCTGCACACTCTCTAGGGAACAAGGCTTaGGGTGAGGTAGAGAACCAACAGCATTTGGAAGAAATGGAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: PSCLSLPAHSLGNKA*GEVENQQHLEEMEE Trigger: CTCCTCCATTTCTTCCAAATGCTGTTGGTTCTCTACCTCACCTCAAGCCTTGTTCCCTAGAGAGTGTGCAGGTAGACTCAGGCAAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | TGTAGCCTGACTATGCTGCAAAAACTGGCAGAAGGCAGACTCATGTaGAGAGTCATTCTGGCACCACAGCCCAGATGTTGTAGGGACACA | + |
|
Preference number: 1 (lower is better) Translates to: CSLTMLQKLAEGRLM*RVILAPQPRCCRDT Trigger: TGTGTCCCTACAACATCTGGGCTGTGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTCTGCCAGTTTTTGCAGCATAGTCAGGCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | CCTCATTGCAGCACAGGGACAGGAGCTGGTACTGAAGAGAACGGCTaGAAATGCCTGTATTTGGACATATGCACAATCCTGGTTTCAGGT | + |
|
Preference number: 1 (lower is better) Translates to: PHCSTGTGAGTEENG*KCLYLDICTILVSG Trigger: ACCTGAAACCAGGATTGTGCATATGTCCAAATACAGGCATTTGCAGCCGTTCTCTTCAGTACCAGCTCCTGTCCCTGTGCTGCAATGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | TGGCAAGAGTCCAGTCCATTAAGTGCAGCGTGCAATACTAGTGCTTaGAGTGTCCTGTCCTCATCAACGAAGCATGTGGACAGGATAGCA | + |
|
Preference number: 1 (lower is better) Translates to: WQESSPLSAACNTSA*SVLSSSTKHVDRIA Trigger: TGCTATCCTGTCCACATGCTTCGTTGATGAGGACAGGACACTCCAAGCACTAGTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | GGACAGGAGCTGGTACTGAAGAGAACGGCTGCAAATGCCTGTATTTaGACATATGCACAATCCTGGTTTCAGGTCCCCAAGTTTTCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: GQELVLKRTAANACI*TYAQSWFQVPKFSF Trigger: GAAGGAAAACTTGGGGACCTGAAACCAGGATTGTGCATATGTCCAAATACAGGCATTTGCAGCCGTTCTCTTCAGTACCAGCTCCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | TCTGCTACTCTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTaGGGTTTGATGAAGCTCAGGCTTCCCACACAAGCTCAAGTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: SATLHTVSFPTSTSV*GLMKLRLPTQAQVL Trigger: AAGCACTTGAGCTTGTGTGGGAAGCCTGAGCTTCATCAAACCCCAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAGAGTAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 90 bp | AGAGGGAACAAGGAACAGATACATGCATGTGTGTGTATACACACATaGATATGCACACATGTACACACACACACACACCCTGAGGTTAAC | + |
|
Preference number: 1 (lower is better) Translates to: RGNKEQIHACVCIHT*ICTHVHTHTHPEVN Trigger: GTTAACCTCAGGGTGTGTGTGTGTGTGTACATGTGTGCATATGCATGTGTGTATACACACACATGCATGTATCTGTTCCTTGTTCCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 90 bp | AAGAGAACGGCTGCAAATGCCTGTATTTGGACATATGCACAATCCTaGTTTCAGGTCCCCAAGTTTTCCTTCTATGTATGGCTTAAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: KRTAANACIWTYAQS*FQVPKFSFYVWLKH Trigger: ATGCTTAAGCCATACATAGAAGGAAAACTTGGGGACCTGAAACCAGGATTGTGCATATGTCCAAATACAGGCATTTGCAGCCGTTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 90 bp | GCATGGAGAGTCATCGGTGAGAAGCTGACCACCGGGCCCTTTCTCTaGTCCACCACCCCAGCCTTCTGCATGGGAGGCCTCCGCTCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: AWRVIGEKLTTGPFL*STTPAFCMGGLRSR Trigger: GCGAGAGCGGAGGCCTCCCATGCAGAAGGCTGGGGTGGTGGACAAGAGAAAGGGCCCGGTGGTCAGCTTCTCACCGATGACTCTCCATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAGCTACAGGACCTACAGCACCCCTTTCCCCCGCAGGGCCGAAGCTCACTCTTGTAAAAGCTCTAGGCTaGGTCAGGCAGTATCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GATGPTAPLSPAGPKLTLVKALG*VRQYLG Trigger: CCCCAGATACTGCCTGACTCAGCCTAGAGCTTTTAC...AAGAGTGAGCTTCGGCCCTGCGGGGGAAAGGGGTGCTGTAGGTCCTGTAGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTGCACATACCTAGGCTCTGCAAGATGGCTGACCCCTaGACAAGCCCAGGTCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LCWTSSSSHPSLHIPRLCKMADP*TSPGLH Trigger: GTGGAGACCTGGGCTTGTCCAGGGGTCAGCCATCTT...GCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | AGATGGCTGACCCCTGGACAAGCCCAGGTCTCCACCTTCCTTGGCACGTCTGACCTAAACGCACACGGGTaGACAAGCATTCGCCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RWLTPGQAQVSTFLGTSDLNAHG*TSIRLH Trigger: ATGCAGGCGAATGCTTGTGCACCCGTGTGCGTTTAG...GTCAGACGTGCCAAGGAAGGTGGAGACCTGGGCTTGTCCAGGGGTCAGCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTCAGCATGCAGAGGTGTGGTGAGAGGAGCTACAGGACCTACAGCACCCCTCTGCCTCCAGGGCCATaGCAAGAGTCCAGTCCATTA | + |
|
Preference number: 2 (lower is better) Translates to: PLSMQRCGERSYRTYSTPLPPGP*QESSPL Trigger: TAATGGACTGGACTCTTGCCATGGCCCTGGAGGCAG...AGGGGTGCTGTAGGTCCTGTAGCTCCTCTCACCACACCTCTGCATGCTGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGCTCTGCTACTCTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTGGCTGCAGAGCCCAGAGTaGGGGCTAGAGCTCCCGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LGSATLHTVSFPTSTSVWLQSPE*GLELPP Trigger: GGGCGGGAGCTCTAGCCCCCACTCTGGGCTCTGCAG...CCAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAGAGTAGCAGAGCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGCAGACTCATGTGCAGAGTCATTCTGGCACCACAGCCCAGATGTTGTAGGCTTGCCTCAGACACCTaGCTCCAGGGCCATGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: EGRLMCRVILAPQPRCCRLASDT*LQGHGK Trigger: CTTGCCATGGCCCTGGAGGCAGGTGTCTGAGGCAAG...CCTACAACATCTGGGCTGTGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CCACCTCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACTCCCCCAGGCATCCTaGGCATCTGCTCAACTGATG | + |
|
Preference number: 2 (lower is better) Translates to: PPQAGPGLQSMKAYKLHPLPQAS*ASAQLM Trigger: CATCAGTTGAGCAGATGCCCAGGATGCCTGGGGGAG...TGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAGCTACAGGACCTACAGCACCCCTTTCCCCCGCAGGGCCGAAGCTCACTCTTGTGGATGAAAGGTATTaGGTTAGCTGCCTAAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GATGPTAPLSPAGPKLTLVDERY*VSCLSL Trigger: CAGACTTAGGCAGCTAACTCAATACCTTTCATCCAC...AAGAGTGAGCTTCGGCCCTGCGGGGGAAAGGGGTGCTGTAGGTCCTGTAGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCTCTGCGCAACCACACTaGAGAGCCCAGAGTGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFSAQPH*RAQSGG Trigger: GCCCCCACTCTGGGCTCTGCAGTGTGGTTGCGCAGA...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACCTCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCAGGCATCCTGGGCATCTaGTCAACTGATGCCCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: PPQAGPGLQSMKAYKLHPGILGI*STDAQN Trigger: GTTCTGGGCATCAGTTGAGCAGATGCCCAGGATGCC...TGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTACAGGACCTACAGCACCCCTTTCCCCCGCAGGGCCGAAGCTCACTCTTAGAAACCTTTCCAAATaGGAGTGGAGTCAACTACCC | + |
|
Preference number: 2 (lower is better) Translates to: GATGPTAPLSPAGPKLTLRNLSK*EWSQLP Trigger: GGGTAGTTGACTCCACTCCCATTTGGAAAGGTTTCT...AAGAGTGAGCTTCGGCCCTGCGGGGGAAAGGGGTGCTGTAGGTCCTGTAGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTGCACATACCTAGGCTCTGCTGTGCAGAGTCATTCTaGCACCACAGCCCAGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LCWTSSSSHPSLHIPRLCCAESF*HHSPDV Trigger: AACATCTGGGCTGTGGTGCCAGAATGACTCTGCACA...GCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 90 bp | TCTTCTGCTGCATCCCTCGTTCCCAAAAGAGATGGAGGCATGCGTTaGCCGCGATCACACTGCCCAGCACGGGCTGTATTTAAAGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSAASLVPKRDGGMR*PRSHCPARAVFKEP Trigger: TGGCTCTTTAAATACAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTTGGGAACGAGGGATGCAGCAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCAGACTCATGTGCAGAGTCATTCTGGCACCACAGCCCAGATGTTGTAGGGCTGAGAGCCAGAAGTaGCATCCTGACCCAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: EGRLMCRVILAPQPRCCRAESQK*HPDPGR Trigger: TCTTCCTGGGTCAGGATGTCACTTCTGGCTCTCAGC...CCTACAACATCTGGGCTGTGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGCAAAAACTGGCAGAAGGCAGACTCATGTGCAGAGTCATTCTGGCACCATCTCTCCTCCCAGGCTaGGGCACTGAGGCTTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: MLQKLAEGRLMCRVILAPSLLPG*GTEASG Trigger: TCCTGAAGCCTCAGTGCCTCAGCCTGGGAGGAGAGA...TGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTCTGCCAGTTTTTGCAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACCTCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCAGCTAGAATCCCTCATTaGAGCACAGGGACAGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PPQAGPGLQSMKAYKLHPARIPH*STGTGA Trigger: AGCTCCTGTCCCTGTGCTGCAATGAGGGATTCTAGC...TGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGCTCTGCTACTCTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTGGCACAGAGCTATAAGCTaGAGCCCCGAGGAGGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGSATLHTVSFPTSTSVWHRAIS*SPEEGS Trigger: GGAGCCCTCCTCGGGGCTGCAGCTTATAGCTCTGTG...CCAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAGAGTAGCAGAGCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTGCACATACCTAGGCTCTGCTTGCCTGAGTCTACCTaGACACTCTCTAGGGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LCWTSSSSHPSLHIPRLCLPEST*TLSREQ Trigger: TTGTTCCCTAGAGAGTGTGCAGGTAGACTCAGGCAA...GCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCCATGCGACGCTTTGTTaGGTCTGGCAGAGGCGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFHATLC*VWQRRW Trigger: CCAGCGCCTCTGCCAGACCCAACAAAGCGTCGCATG...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGGGCTCAAGAGGCAAGGGTGAGAAACCTTTCCAAATGGGAGTGGAGTCAAAGGATAGCAGTCACCTaGCAGGAGGCCTTGACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SGAQEARVRNLSKWEWSQRIAVT*QEALTS Trigger: AGAGGTCAAGGCCTCCTGTCAGGTGACTGCTATCCT...TTGACTCCACTCCCATTTGGAAAGGTTTCTCACCCTTGCCTCTTGAGCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCCATCCCAGACACCTTTaGGGGCAGAGCCAGGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFHPRHL*GQSQDH Trigger: ATGGTCCTGGCTCTGCCCTCAAAGGTGTCTGGGATG...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCTACAGGACCTACAGCACCCCTTTCCCCCGCAGGGCCGAAGCTCACTCTTAAGTGTGATCACACATaGATACAAGTGTGCAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: GATGPTAPLSPAGPKLTLKCDHT*IQVCRC Trigger: ACATCTGCACACTTGTATGCATGTGTGATCACACTT...AAGAGTGAGCTTCGGCCCTGCGGGGGAAAGGGGTGCTGTAGGTCCTGTAGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTCAGCATGCAGAGGTGTGGTGAGAGGAGCTACAGGACCTACAGCACCCCTAGAACCAACAGCATTTaGAAGAAATGGAGGAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLSMQRCGERSYRTYSTPRTNSI*KKWRSR Trigger: CCTGCTCCTCCATTTCTTCCAAATGCTGTTGGTTCT...AGGGGTGCTGTAGGTCCTGTAGCTCCTCTCACCACACCTCTGCATGCTGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACACTTATTTGTAGGGGAAGCTaGTCTCCCCCAGGCATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSWAWTPVYEGIQTPPTLICRGS*SPPGIL Trigger: CAGGATGCCTGGGGGAGACCAGCTTCCCCTACAAAT...AAGTGTGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGCTCTGCTACTCTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTGGCATGCAGAGGTGTGGTaGGAGGAGCTACAGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: LGSATLHTVSFPTSTSVWHAEVW*EELQDL Trigger: TAGGTCCTGTAGCTCCTCTCACCACACCTCTGCATG...CCAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAGAGTAGCAGAGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGGTACACATCAGGTGTCTAAGACCAGGAACAGCCATGACATCATCCCAGCAGATCCAGACTCCCTaGCACACATCCCAGACACCT | + |
|
Preference number: 2 (lower is better) Translates to: QQVHIRCLRPGTAMTSSQQIQTP*HTSQTP Trigger: AGGTGTCTGGGATGTGTGGCAGGGAGTCTGGATCTG...CTGGGATGATGTCATGGCTGTTCCTGGTCTTAGACACCTGATGTGTACCTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | TATACTGAAGGGTCAACCGAGCAGATCCAGACTCCCTGCCACACATCCCAGACACCCCTTGCCCTGAGGTaGATGAAAGGTATTGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: YTEGSTEQIQTPCHTSQTPLALR*MKGIEL Trigger: TAACTCAATACCTTTCATCCACCTCAGGGCAAGGGG...TGTCTGGGATGTGTGGCAGGGAGTCTGGATCTGCTCGGTTGACCCTTCAGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | TATACTGAAGGGTCAACCGAGCAGATCCAGACTCCCTGCCACACATCCCAGACACTATGCTGCAAAAACTaGCAGAAGGCAGACTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: YTEGSTEQIQTPCHTSQTLCCKN*QKADSC Trigger: ACATGAGTCTGCCTTCTGCCAGTTTTTGCAGCATAG...TGTCTGGGATGTGTGGCAGGGAGTCTGGATCTGCTCGGTTGACCCTTCAGTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | GAACGAAGGGGTCTGTCAAACTTGGTGACACTGAGCCAAAGACCTGAGAGAAATCTCCAAAAGGGTACCTaGCCCACAAGATTCTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: ERRGLSNLVTLSQRPERNLQKGT*PTRFWG Trigger: ACCCCAGAATCTTGTGGGCCAGGTACCCTTTTGGAG...ATTTCTCTCAGGTCTTTGGCTCAGTGTCACCAAGTTTGACAGACCCCTTCGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 90 bp | GGGACAGGAGCTGGTACTGAAGAGAACGGCTGCAAATGCCTGTATTaGGACATATGCACAATCCTGGTTTCAGGTCCCCAAGTTTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GTGAGTEENGCKCLY*DICTILVSGPQVFL Trigger: AAGGAAAACTTGGGGACCTGAAACCAGGATTGTGCATATGTCCAAATACAGGCATTTGCAGCCGTTCTCTTCAGTACCAGCTCCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 90 bp | ACTCTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTGGGGTTaGATGAAGCTCAGGCTTCCCACACAAGCTCAAGTGCTTCGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TLHTVSFPTSTSVWG*MKLRLPTQAQVLRS Trigger: ACTTCGAAGCACTTGAGCTTGTGTGGGAAGCCTGAGCTTCATCAAACCCCAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | GAACGAAGGGGTCTGTCAAACTTGGTGACACTGAGCCAAAGACCTGAGAGAAATGAAGGCAGACTCATGTaGAGAGTCATTCTGGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: ERRGLSNLVTLSQRPERNEGRLM*RVILAP Trigger: TGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTC...ATTTCTCTCAGGTCTTTGGCTCAGTGTCACCAAGTTTGACAGACCCCTTCGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACCTCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACTGTATTTGGACATATaGACAATCCTGGTTTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PPQAGPGLQSMKAYKLHPLYLDI*TILVSG Trigger: ACCTGAAACCAGGATTGTGCATATGTCCAAATACAG...TGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCATGTGTACACACACATaGAGAGGTTCATACCCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFMCTHT*RGSYPS Trigger: CGAGGGGTATGAACCTCTGCATGTGTGTGTACACAT...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGCTCTGCTACTCTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTGGCTTTCCAAATGGGAGTaGAGTCAACTACCCTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LGSATLHTVSFPTSTSVWLSKWE*SQLPCL Trigger: AAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAAG...CCAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAGAGTAGCAGAGCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTGCACATACCTAGGCTCTGCTTTTCCTTCTATGTATaGCTTAAGCATGTAGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LCWTSSSSHPSLHIPRLCFSFYV*LKHVVL Trigger: GAGAACTACATGCTTAAGCCATACATAGAAGGAAAA...GCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | CAACAGGTACACATCAGGTGTCTAAGACCAGGAACAGCCATGACATCATCCCAGGAAGGATGGCAAGTGTaGTCACACATGCATACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QQVHIRCLRPGTAMTSSQEGWQV*SHMHTS Trigger: ACTTGTATGCATGTGTGATCACACTTGCCATCCTTC...CTGGGATGATGTCATGGCTGTTCCTGGTCTTAGACACCTGATGTGTACCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCGAGAACGGCTGCAAATaGCTGTATTTGGACATATGC | + |
|
Preference number: 2 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFENGCK*LYLDIC Trigger: GCATATGTCCAAATACAGGCATTTGCAGCCGTTCTC...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGGTACACATCAGGTGTCTAAGACCAGGAACAGCCATGACATCATCCCAGTGCAATACTAGTGCTTaGAGTGTCCTGTCCTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: QQVHIRCLRPGTAMTSSQCNTSA*SVLSSS Trigger: TGATGAGGACAGGACACTCCAAGCACTAGTATTGCA...CTGGGATGATGTCATGGCTGTTCCTGGTCTTAGACACCTGATGTGTACCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCGCAAATGCCTGTATTTaGACATATGCACAATCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFANACI*TYAQSW Trigger: CCAGGATTGTGCATATGTCCAAATACAGGCATTTGC...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACACTTCTTAGCTTGTTAAGATaGCTTTCTAGGCAGCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSWAWTPVYEGIQTPPTLLSLLR*LSRQLF Trigger: GAAAAGCTGCCTAGAAAGCCATCTTAACAAGCTAAG...AAGTGTGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR TCA 90 bp | CAACAGGTACACATCAGGTGTCTAAGACCAGGAACAGCCATGACATCATCCCAGCTTAACAGATACAAATaGTTGCGCTCTGTGTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QQVHIRCLRPGTAMTSSQLNRYK*LRSVLC Trigger: ACACAACACAGAGCGCAATCATTTGTATCTGTTAAG...CTGGGATGATGTCATGGCTGTTCCTGGTCTTAGACACCTGATGTGTACCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR GCA 90 bp | ACCTTAGTAAGCAAGAAGGATGGCAAGTGTGATCACACATGCATACAAGTGTGCCCATTAAGTGCAGCGTaGAATACTAGTGCTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TLVSKKDGKCDHTCIQVCPLSAA*NTSAWS Trigger: ACTCCAAGCACTAGTATTGCACGCTGCACTTAATGG...GCACACTTGTATGCATGTGTGATCACACTTGCCATCCTTCTTGCTTACTAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | GCTGCTGAGAGGCCGAGTCTCCTCCCAGACAGCCTGTaGTGGACCAGCTCTTCCTCACACCCCTCCTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AAERPSLLPDSL*WTSSSSHPSLH Trigger: GTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAGGCTGTCTGGGAGGAGACTCGGCCTCTCAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | GGCCCTTTCTCTTGTCCACCACCCCAGCCTTCTGCATaGGAGGCCTCCGCTCTCGCACCACACCACACCACT | + |
|
Preference number: 3 (lower is better) Translates to: GPFSCPPPQPSA*EASALAPHHTT Trigger: AGTGGTGTGGTGTGGTGCGAGAGCGGAGGCCTCCCATGCAGAAGGCTGGGGTGGTGGACAAGAGAAAGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | CTGCTGCATCCCTCGTTCCCAAAAGAGATGGAGGCATaGGTTTGCCGCGATCACACTGCCCAGCACGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLHPSFPKEMEA*VCRDHTAQHGL Trigger: CAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTTGGGAACGAGGGATGCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | GCTGAGAGGCCGAGTCTCCTCCCAGACAGCCTGTGCTaGACCAGCTCTTCCTCACACCCCTCCTTGCACATA | + |
|
Preference number: 3 (lower is better) Translates to: AERPSLLPDSLC*TSSSSHPSLHI Trigger: TATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAGGCTGTCTGGGAGGAGACTCGGCCTCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | GTGGAGAGGGATCCTCCAGCCAGGCTGCCCAGCACTTaGAGCCAGAGAGCGTCTTTGAGGAAAAGAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VERDPPARLPST*SQRASLRKRAL Trigger: CAAGGCTCTTTTCCTCAAAGACGCTCTCTGGCTCCAAGTGCTGGGCAGCCTGGCTGGAGGATCCCTCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | GCTCAGGCTTCCCACACAAGCTCAAGTGCTTCGAAGTaGCAGATCCCTGTCACAGGTGGGGCGCAACAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AQASHTSSSASK*QIPVTGGAQQC Trigger: GCACTGTTGCGCCCCACCTGTGACAGGGATCTGTCACTTCGAAGCACTTGAGCTTGTGTGGGAAGCCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | AGTCTCTTGAGGCATGGAGAGTCATCGGTGAGAAGCTaGCCACCGGGCCCTTTCTCTTGTCCACCACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLLRHGESSVRS*PPGPFSCPPPQ Trigger: CTGGGGTGGTGGACAAGAGAAAGGGCCCGGTGGTCAGCTTCTCACCGATGACTCTCCATGCCTCAAGAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | TATCTCCAAGCTCTCCCAGCTCTACTCCAGCTCACATaGGACGCTTTGTTGGGTCTGGCAGAGGCGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YLQALPALLQLT*DALLGLAEALA Trigger: AGCCAGCGCCTCTGCCAGACCCAACAAAGCGTCGCATGTGAGCTGGAGTAGAGCTGGGAGAGCTTGGAGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | GGTATAAACACGAGAGCCTGCAAGATGGCTGACCCCTaGACAAGCCCAGGTCTCCACCTTCCTTGGCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: GINTRACKMADP*TSPGLHLPWHV Trigger: GACGTGCCAAGGAAGGTGGAGACCTGGGCTTGTCCAGGGGTCAGCCATCTTGCAGGCTCTCGTGTTTATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CAA 90 bp | CCACCTCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACCCTTCCACACCCTCTaGCCTGAGTCTACCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PPQAGPGLQSMKAYKLHPPFHTL*PESTCT Trigger: TGTGCAGGTAGACTCAGGCAAGAGGGTGTGGAAGGG...TGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | GTTACCAGAGCTTCCTCTCAGCATGCAGAGGTGTGGTaGGAGGAGCTACAGGACCTACAGCACCCCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VTRASSQHAEVW*EELQDLQHPFP Trigger: GGGAAAGGGGTGCTGTAGGTCCTGTAGCTCCTCTCACCACACCTCTGCATGCTGAGAGGAAGCTCTGGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | AGATCCAGACTCCCTGCCACACATCCCAGACACCTTTaGGGGCAGAGCCAGGACCATAGATCTGCGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSRLPATHPRHL*GQSQDHRSAEN Trigger: ATTCTCCGCAGATCTATGGTCCTGGCTCTGCCCTCAAAGGTGTCTGGGATGTGTGGCAGGGAGTCTGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | CTTGCCATCCCCAGGAGGAAGTGGCCCAGCAGAATATaGATCGGGTTACCAGAGCTTCCTCTCAGCATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LAIPRRKWPSRI*IGLPELPLSMQ Trigger: CTGCATGCTGAGAGGAAGCTCTGGTAACCCGATTCATATTCTGCTGGGCCACTTCCTCCTGGGGATGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | TACTGCTGGTATAAACACGAGAGCCTGCAAGATGGCTaGCCCCTGGACAAGCCCAGGTCTCCACCTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: YCWYKHESLQDG*PLDKPRSPPSL Trigger: CAAGGAAGGTGGAGACCTGGGCTTGTCCAGGGGTCAGCCATCTTGCAGGCTCTCGTGTTTATACCAGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | CATCCCTCGTTCCCAAAAGAGATGGAGGCATGCGTTTaGCGCGATCACACTGCCCAGCACGGGCTGTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: HPSFPKEMEACV*RDHTAQHGLYL Trigger: TAAATACAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTTGGGAACGAGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | TATACTGAAGGGTCAACCGAGCAGATCCAGACTCCCTaGCACACATCCCAGACACCTTTGAGGGCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YTEGSTEQIQTP*HTSQTPLRAEP Trigger: TGGCTCTGCCCTCAAAGGTGTCTGGGATGTGTGGCAGGGAGTCTGGATCTGCTCGGTTGACCCTTCAGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | TTCAACTGCGAGGGCTCAGGCAGAAAGATGTCTGTTTaGAAACCCACCTCAAGCTGGGCCTGGACTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FNCEGSGRKMSV*KPTSSWAWTPV Trigger: GACTGGAGTCCAGGCCCAGCTTGAGGTGGGTTTGCAAACAGACATCTTTCTGCCTGAGCCCTCGCAGTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | GCCTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTaGACATACCTAGGCTCTGCTACTCTTCATACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ACAGPALPHTPP*TYLGSATLHTV Trigger: AACCGTATGAAGAGTAGCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | CAAGAGGCAAGGGTGAGAAACCTTTCCAAATGGGAGTaGAGTCAACTACCCTGCCTTGCCTCAGACACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QEARVRNLSKWE*SQLPCLASDTC Trigger: GCAGGTGTCTGAGGCAAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAAGGTTTCTCACCCTTGCCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | AACTGGCAGAAGGCAGACTCATGTGCAGAGTCATTCTaGCACCACAGCCCAGATGTTGTAGGGACACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NWQKADSCAESF*HHSPDVVGTQE Trigger: CTCCTGTGTCCCTACAACATCTGGGCTGTGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTCTGCCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | CAACGGCCCAGCATGGAAAGACTGAGGAATGGTAAGTaGACAGAGCAGACGGACATAGCAACTCAGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRPSMERLRNGK*TEQTDIATQQG Trigger: TCCCTGCTGAGTTGCTATGTCCGTCTGCTCTGTCCACTTACCATTCCTCAGTCTTTCCATGCTGGGCCGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | AGTTTTCACTGTACTGCTGGTATAAACACGAGAGCCTaGAAGATGGCTGACCCCTGGACAAGCCCAGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SFHCTAGINTRA*KMADPWTSPGL Trigger: GAGACCTGGGCTTGTCCAGGGGTCAGCCATCTTGCAGGCTCTCGTGTTTATACCAGCAGTACAGTGAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | CTCAAGTGCTTCGAAGTGACAGATCCCTGTCACAGGTaGGGCGCAACAGTGCTGACTACTACAGAGATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LKCFEVTDPCHR*GATVLTTTEIL Trigger: AAGGATCTCTGTAGTAGTCAGCACTGTTGCGCCCCACCTGTGACAGGGATCTGTCACTTCGAAGCACTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | AGATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTaGACCCCCAAAGCCTTTCACCCTTCCACACCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RWLSRQLFHVSS*TPKAFHPSTPS Trigger: AGAGGGTGTGGAAGGGTGAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | AAAAGAGATGGAGGCATGCGTTTGCCGCGATCACACTaGCCAGCACGGGCTGTATTTAAAGAGCCATACTCA | + |
|
Preference number: 3 (lower is better) Translates to: KRDGGMRLPRSH*PARAVFKEPYS Trigger: TGAGTATGGCTCTTTAAATACAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | GAATATGAATCGGGTTACCAGAGCTTCCTCTCAGCATaGAGAGGTGTGGTGAGAGGAGCTACAGGACCTACA | + |
|
Preference number: 3 (lower is better) Translates to: EYESGYQSFLSA*RGVVRGATGPT Trigger: TGTAGGTCCTGTAGCTCCTCTCACCACACCTCTGCATGCTGAGAGGAAGCTCTGGTAACCCGATTCATATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | GCGTTTGAAGGGATGGGGGTGAGTGGTGAGGTAACTTaGAAACACTGGAAGATCTACGCTGGACTCTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: AFEGMGVSGEVT*KHWKIYAGLSI Trigger: AATGGAGAGTCCAGCGTAGATCTTCCAGTGTTTGCAAGTTACCTCACCACTCACCCCCATCCCTTCAAACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | AAGATGTCTGTTTGCAAACCCACCTCAAGCTGGGCCTaGACTCCAGTCTATGAAGGCATACAAACTCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: KMSVCKPTSSWA*TPVYEGIQTPP Trigger: GGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGGGTTTGCAAACAGACATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CAA 90 bp | GAACGAAGGGGTCTGTCAAACTTGGTGACACTGAGCCAAAGACCTGAGAGAAATGCTAAGACCCACAGCTaGAACACGGGAGGTCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: ERRGLSNLVTLSQRPERNAKTHS*NTGGQI Trigger: GATTTGACCTCCCGTGTTCAAGCTGTGGGTCTTAGC...ATTTCTCTCAGGTCTTTGGCTCAGTGTCACCAAGTTTGACAGACCCCTTCGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | AATCCCTCATTGCAGCACAGGGACAGGAGCTGGTACTaGAGAGAACGGCTGCAAATGCCTGTATTTGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: NPSLQHRDRSWY*RERLQMPVFGH Trigger: ATGTCCAAATACAGGCATTTGCAGCCGTTCTCTTCAGTACCAGCTCCTGTCCCTGTGCTGCAATGAGGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | ACTATGCTGCAAAAACTGGCAGAAGGCAGACTCATGTaGAGAGTCATTCTGGCACCACAGCCCAGATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TMLQKLAEGRLM*RVILAPQPRCC Trigger: ACAACATCTGGGCTGTGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTCTGCCAGTTTTTGCAGCATAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | GGCAGAAAGATGTCTGTTTGCAAACCCACCTCAAGCTaGGCCTGGACTCCAGTCTATGAAGGCATACAAACT | + |
|
Preference number: 3 (lower is better) Translates to: GRKMSVCKPTSS*AWTPVYEGIQT Trigger: AGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGGGTTTGCAAACAGACATCTTTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | CTTCATACGGTTTCCTTTCCAACTTCCACCAGTGTCTaGGGTTTGATGAAGCTCAGGCTTCCCACACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LHTVSFPTSTSV*GLMKLRLPTQA Trigger: AGCTTGTGTGGGAAGCCTGAGCTTCATCAAACCCCAGACACTGGTGGAAGTTGGAAAGGAAACCGTATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | CTGAGTCTACCTGCACACTCTCTAGGGAACAAGGCTTaGGGTGAGGTAGAGAACCAACAGCATTTGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLPAHSLGNKA*GEVENQQHLEE Trigger: TTCTTCCAAATGCTGTTGGTTCTCTACCTCACCTCAAGCCTTGTTCCCTAGAGAGTGTGCAGGTAGACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR-3UTR CAA 90 bp | GAACGAAGGGGTCTGTCAAACTTGGTGACACTGAGCCAAAGACCTGAGAGAAATTTGAGGAAAAGAGCCTaGGTAAAGAGGCCACTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ERRGLSNLVTLSQRPERNLRKRA*VKRPLR Trigger: TCTCAGTGGCCTCTTTACCAAGGCTCTTTTCCTCAA...ATTTCTCTCAGGTCTTTGGCTCAGTGTCACCAAGTTTGACAGACCCCTTCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR GCA 72 bp | CTGGGGCCCCATTCCCTCTTAACAGATACAAATGATTaGGCTCTGTGTTGTGTAACACAGAGCTATAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGPHSLLTDTND*ALCCVTQSYKL Trigger: CAGCTTATAGCTCTGTGTTACACAACACAGAGCGCAATCATTTGTATCTGTTAAGAGGGAATGGGGCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR TCA 72 bp | CTGCTGGTAGCCCTTGCTAAATTCTGCACCAAGTTTTaGAGGATGAAAGACAACAGAGGTAGGGAACTTACC | + |
|
Preference number: 3 (lower is better) Translates to: LLVALAKFCTKF*RMKDNRGRELT Trigger: GGTAAGTTCCCTACCTCTGTTGTCTTTCATCCTTCAAAACTTGGTGCAGAATTTAGCAAGGGCTACCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | GCTGCAAATGCCTGTATTTGGACATATGCACAATCCTaGTTTCAGGTCCCCAAGTTTTCCTTCTATGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: AANACIWTYAQS*FQVPKFSFYVW Trigger: CCATACATAGAAGGAAAACTTGGGGACCTGAAACCAGGATTGTGCATATGTCCAAATACAGGCATTTGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CCA 72 bp | TCCTGGTTTCAGGTCCCCAAGTTTTCCTTCTATGTATaGCTTAAGCATGTAGTTCTCAACTGGAATCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: SWFQVPKFSFYV*LKHVVLNWNLI Trigger: GATAAGATTCCAGTTGAGAACTACATGCTTAAGCCATACATAGAAGGAAAACTTGGGGACCTGAAACCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | GTCATCGGTGAGAAGCTGACCACCGGGCCCTTTCTCTaGTCCACCACCCCAGCCTTCTGCATGGGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIGEKLTTGPFL*STTPAFCMGGL Trigger: GAGGCCTCCCATGCAGAAGGCTGGGGTGGTGGACAAGAGAAAGGGCCCGGTGGTCAGCTTCTCACCGATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | GCTCTCCCAGCTCTACTCCAGCTCACATGCGACGCTTaGTTGGGTCTGGCAGAGGCGCTGGCTCTAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALPALLQLTCDA*LGLAEALALRG Trigger: GCCTCTTAGAGCCAGCGCCTCTGCCAGACCCAACAAAGCGTCGCATGTGAGCTGGAGTAGAGCTGGGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | CTCCCAGCTCTACTCCAGCTCACATGCGACGCTTTGTaGGGTCTGGCAGAGGCGCTGGCTCTAAGAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPALLQLTCDAL*GLAEALALRGK Trigger: CTTGCCTCTTAGAGCCAGCGCCTCTGCCAGACCCAACAAAGCGTCGCATGTGAGCTGGAGTAGAGCTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTGCACATACCTAGGCTCTGCGACGTGGGATGGGCCTaGTCGGAAAGCTGTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCWTSSSSHPSLHIPRLCDVGWA*SESCNF Trigger: GAAGTTACAGCTTTCCGACCAGGCCCATCCCACGTC...GCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | ACCTTTCCAAATGGGAGTGGAGTCAACTACCCTGCCTaGCCTCAGACACCTGCCTCCAGGGCCATGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFPNGSGVNYPA*PQTPASRAMAR Trigger: TCTTGCCATGGCCCTGGAGGCAGGTGTCTGAGGCAAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | GCATCCCTCGTTCCCAAAAGAGATGGAGGCATGCGTTaGCCGCGATCACACTGCCCAGCACGGGCTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLVPKRDGGMR*PRSHCPARAVF Trigger: AAATACAGCCCGTGCTGGGCAGTGTGATCGCGGCAAACGCATGCCTCCATCTCTTTTGGGAACGAGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | GCCAGGCTGCCCAGCACTTGGAGCCAGAGAGCGTCTTaGAGGAAAAGAGCCTTGGTAAAGAGGCCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARLPSTWSQRAS*RKRALVKRPLR Trigger: TCTCAGTGGCCTCTTTACCAAGGCTCTTTTCCTCAAAGACGCTCTCTGGCTCCAAGTGCTGGGCAGCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | CTTCAACTGCGAGGGCTCAGGCAGAAAGATGTCTGTTaGCAAACCCACCTCAAGCTGGGCCTGGACTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLRGLRQKDVC*QTHLKLGLDSS Trigger: ACTGGAGTCCAGGCCCAGCTTGAGGTGGGTTTGCAAACAGACATCTTTCTGCCTGAGCCCTCGCAGTTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTGGACCAGCTCTTCCTCACACCCCTCCTTGCACATACCTAGGCTCTGCCCACATTTCGGAAATTaGGGAACCTCTCGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCWTSSSSHPSLHIPRLCPHFGN*GTSRSQ Trigger: CTGACTACGAGAGGTTCCCCAATTTCCGAAATGTGG...GCAGAGCCTAGGTATGTGCAAGGAGGGGTGTGAGGAAGAGCTGGTCCAGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | CTGAACCCCCAAAGCCTTTCACCCTTCCACACCCTCTaGCCTGAGTCTACCTGCACACTCTCTAGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNPQSLSPFHTL*PESTCTLSREQ Trigger: TTGTTCCCTAGAGAGTGTGCAGGTAGACTCAGGCAAGAGGGTGTGGAAGGGTGAAAGGCTTTGGGGGTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR TCA 90 bp | GAAGGCAGACTCATGTGCAGAGTCATTCTGGCACCACAGCCCAGATGTTGTAGGTCCCCACGGTGTCATTaGGTGTCTGCTGCAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: EGRLMCRVILAPQPRCCRSPRCH*VSAADT Trigger: TGTATCTGCAGCAGACACTCAATGACACCGTGGGGA...CCTACAACATCTGGGCTGTGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGCTCAAGAGGCAAGGGTGAGAAACCTTTCCAAATGGGAGTGGAGTCAATTGTCAAAGTCCACCTaGCTCTGCCTGTCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGAQEARVRNLSKWEWSQLSKST*LCLSQG Trigger: CCCCTGTGACAGGCAGAGCCAGGTGGACTTTGACAA...TTGACTCCACTCCCATTTGGAAAGGTTTCTCACCCTTGCCTCTTGAGCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR TCA 90 bp | AGATGGCTGACCCCTGGACAAGCCCAGGTCTCCACCTTCCTTGGCACGTCTGACCTTTCTGATGAGCTTTaGGAGGATATTCGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWLTPGQAQVSTFLGTSDLSDEL*EDIRFS Trigger: AGAGAATCGAATATCCTCTCAAAGCTCATCAGAAAG...GTCAGACGTGCCAAGGAAGGTGGAGACCTGGGCTTGTCCAGGGGTCAGCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR GCA 90 bp | ACCTTAGTAAGCAAGAAGGATGGCAAGTGTGATCACACATGCATACAAGTGTGCAGGTTAGAGGTCAGCTaGCCCCAGCCGCGTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLVSKKDGKCDHTCIQVCRLEVS*PQPRFP Trigger: GGGGAAACGCGGCTGGGGGCAGCTGACCTCTAACCT...GCACACTTGTATGCATGTGTGATCACACTTGCCATCCTTCTTGCTTACTAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGACTCATGTGCAGAGTCATTCTGGCACCACAGCCCAGATGTTGTAGGGTGATGGACAGGGTATaGATAGAGGCACTCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EGRLMCRVILAPQPRCCRVMDRV*IEALEL Trigger: CAGTTCGAGTGCCTCTATCCATACCCTGTCCATCAC...CCTACAACATCTGGGCTGTGGTGCCAGAATGACTCTGCACATGAGTCTGCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | ACCTTAGTAAGCAAGAAGGATGGCAAGTGTGATCACACATGCATACAAGTGTGCAGGCCCCACCTCTTGTaGGTTCCCCAAGGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLVSKKDGKCDHTCIQVCRPHLL*VPQGLS Trigger: GGAGAGGCCTTGGGGAACCCACAAGAGGTGGGGCCT...GCACACTTGTATGCATGTGTGATCACACTTGCCATCCTTCTTGCTTACTAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR TCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCAACCCAAGAAGTCCATaGCAATCTTCCTCCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFNPRSP*QSSSPR Trigger: CCGTGGGGAGGAAGATTGTCATGGACTTCTTGGGTT...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR GCA 90 bp | TATACTGAAGGGTCAACCGAGCAGATCCAGACTCCCTGCCACACATCCCAGACAGTGTCATTGAGTGTCTaGTGCAGATACAACCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTEGSTEQIQTPCHTSQTVSLSV*CRYNRS Trigger: AGAGCGGTTGTATCTGCAGCAGACACTCAATGACAC...TGTCTGGGATGTGTGGCAGGGAGTCTGGATCTGCTCGGTTGACCCTTCAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | ACGGTTTCCTTTCCAACTTCCACCAGTGTCTGGGGTTaGATGAAGCTCAGGCTTCCCACACAAGCTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSFPTSTSVWG*MKLRLPTQAQV Trigger: CACTTGAGCTTGTGTGGGAAGCCTGAGCTTCATCAAACCCCAGACACTGGTGGAAGTTGGAAAGGAAACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR GCA 90 bp | TCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACACTTGAGGTCCCACTTCAGTaGAGGATACACAAGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWAWTPVYEGIQTPPTLEVPLQ*RIHKVC Trigger: ACAAACCTTGTGTATCCTGCACTGAAGTGGGACCTC...AAGTGTGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | CCACCTCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCAAGAACTTATGGGTGCTaGCACTGTACACAGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPQAGPGLQSMKAYKLHPRTYGC*HCTQRN Trigger: ATTTCTCTGTGTACAGTGCCAGCACCCATAAGTTCT...TGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGCTCAAGAGGCAAGGGTGAGAAACCTTTCCAAATGGGAGTGGAGTCAAGTGCCACCAGTACATTaGGATGTAAAGAACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGAQEARVRNLSKWEWSQVPPVH*DVKNIP Trigger: GGGGATGTTCTTTACATCCCAATGTACTGGTGGCAC...TTGACTCCACTCCCATTTGGAAAGGTTTCTCACCCTTGCCTCTTGAGCCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAATGGGAGTGGAGTCAACTACCCTGCCTTGCCTCAGACACCTGCCTCCAGTAATGACTCTATATaGTGCCACCAGTACATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPNGSGVNYPALPQTPASSNDSI*CHQYIG Trigger: CCCAATGTACTGGTGGCACCATATAGAGTCATTACT...GGAGGCAGGTGTCTGAGGCAAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAATGGGAGTGGAGTCAACTACCCTGCCTTGCCTCAGACACCTGCCTCCCTTGGCTTAAAGTTCTaGAAATTGCCCATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPNGSGVNYPALPQTPASLGLKF*KLPIFF Trigger: GAAGAAGATGGGCAATTTCCAGAACTTTAAGCCAAG...GGAGGCAGGTGTCTGAGGCAAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | GCTGGTACTGAAGAGAACGGCTGCAAATGCCTGTATTaGGACATATGCACAATCCTGGTTTCAGGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGTEENGCKCLY*DICTILVSGPQ Trigger: TTGGGGACCTGAAACCAGGATTGTGCATATGTCCAAATACAGGCATTTGCAGCCGTTCTCTTCAGTACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR GCA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCTTGCCAATATTCTCTTaGAGGTATTCGAGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFLPIFS*RYSRSH Trigger: GTGGGACCTCGAATACCTGCAAGAGAATATTGGCAA...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGCTCAAGAGGCAAGGGTGAGAAACCTTTCCAAATGGGAGTGGAGTCAACAGAGAAATCTCCGTTaGCAATATTCTCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGAQEARVRNLSKWEWSQQRNLR*QYSLAG Trigger: ACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTG...TTGACTCCACTCCCATTTGGAAAGGTTTCTCACCCTTGCCTCTTGAGCCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR GCA 90 bp | GAACGAAGGGGTCTGTCAAACTTGGTGACACTGAGCCAAAGACCTGAGAGAAATATAAGAACTTATGGGTaGTGGCACTGTACACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERRGLSNLVTLSQRPERNIRTYG*WHCTQR Trigger: TCTCTGTGTACAGTGCCAGCACCCATAAGTTCTTAT...ATTTCTCTCAGGTCTTTGGCTCAGTGTCACCAAGTTTGACAGACCCCTTCGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| 3UTR CAA 72 bp | AAGCTCACTCTTCTGCTTCTTCCCAGAACCCTTAGCTaGTTAAGATGGCTTTCTAGGCAGCTTTTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLTLLLLPRTLS*LRWLSRQLFHV Trigger: GACATGGAAAAGCTGCCTAGAAAGCCATCTTAACAAGCTAAGGGTTCTGGGAAGAAGCAGAAGAGTGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR GCA 90 bp | GAACGAAGGGGTCTGTCAAACTTGGTGACACTGAGCCAAAGACCTGAGAGAAATCCGGAGGAAATAAGATaGATCTCTTATGGCCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ERRGLSNLVTLSQRPERNPEEIR*ISYGLL Trigger: TAAAAGGCCATAAGAGATGCATCTTATTTCCTCCGG...ATTTCTCTCAGGTCTTTGGCTCAGTGTCACCAAGTTTGACAGACCCCTTCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 90 bp | GCTCTTCCGCCCGAGGGTCACTCTGGCTCAGACGTGGGATGGGCCTaGTCGGAAAGCTGTAACTTCGTAGCTGGGACTCATCCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPPEGHSGSDVGWA*SESCNFVAGTHPRR Trigger: CCGCCTGGGATGAGTCCCAGCTACGAAGTTACAGCTTTCCGACCAGGCCCATCCCACGTCTGAGCCAGAGTGACCCTCGGGCGGAAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS TCA 90 bp | ACACAAGGTTTGTGTCGGTCAGCACCACTGGCTCCTCATTTTCGATaGGCTCTTCCGCCCGAGGGTCACTCTGGCTCAGACGTGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: TQGLCRSAPLAPHFR*ALPPEGHSGSDVGW Trigger: CCATCCCACGTCTGAGCCAGAGTGACCCTCGGGCGGAAGAGCTCATCGAAAATGAGGAGCCAGTGGTGCTGACCGACACAAACCTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 90 bp | CCACTTCAGTGCAGGATACACAAGGTTTGTGTCGGTCAGCACCACTaGCTCCTCATTTTCGATGAGCTCTTCCGCCCGAGGGTCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLQCRIHKVCVGQHH*LLIFDELFRPRVTL Trigger: CAGAGTGACCCTCGGGCGGAAGAGCTCATCGAAAATGAGGAGCCAGTGGTGCTGACCGACACAAACCTTGTGTATCCTGCACTGAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 90 bp | AAGTCCATGACAATCTTCCTCCCCACGGTGTCATTGAGTGTCTGCTaGAGATACAACCGCTCTTCTCCCCCGCGCTGCTGTATAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSMTIFLPTVSLSVC*RYNRSSPPRCCIAC Trigger: ACAAGCTATACAGCAGCGCGGGGGAGAAGAGCGGTTGTATCTGCAGCAGACACTCAATGACACCGTGGGGAGGAAGATTGTCATGGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 90 bp | GTCACATTTCCTTCCATGCCAATGAGCAACAGGTTAGAGGTCAGCTaGCCCCAGCCGCGTTTCCCCTGCTGTTTATTGATCCAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTFPSMPMSNRLEVS*PQPRFPCCLLIQFQ Trigger: CTGGAACTGGATCAATAAACAGCAGGGGAAACGCGGCTGGGGGCAGCTGACCTCTAACCTGTTGCTCATTGGCATGGAAGGAAATGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 90 bp | TCCGTTGCCAATATTCTCTTGCAGGTATTCGAGGTCCCACTTCAGTaGAGGATACACAAGGTTTGTGTCGGTCAGCACCACTGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVANILLQVFEVPLQ*RIHKVCVGQHHWLL Trigger: GAGGAGCCAGTGGTGCTGACCGACACAAACCTTGTGTATCCTGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 90 bp | CCCCAGGGCCAACCACTGTCTCATAACCAACCACATTTCGGAAATTaGGGAACCTCTCGTAGTCAGGATTGTCAAAGTCCACCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQGQPLSHNQPHFGN*GTSRSQDCQSPPGS Trigger: AGAGCCAGGTGGACTTTGACAATCCTGACTACGAGAGGTTCCCCAATTTCCGAAATGTGGTTGGTTATGAGACAGTGGTTGGCCCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CAA 90 bp | TATACTGAAGGGTCAACCGAGCAGATCCAGACTCCCTGCCACACATCCCAGACAGGTGCCACCAGTACATaGGGATGTAAAGAACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: YTEGSTEQIQTPCHTSQTGATST*GCKEHP Trigger: GGGATGTTCTTTACATCCCAATGTACTGGTGGCACC...TGTCTGGGATGTGTGGCAGGGAGTCTGGATCTGCTCGGTTGACCCTTCAGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CAA 90 bp | GATGGCTTTCTAGGCAGCTTTTCCATGTCTCTAGCTGAACCCCCAAAGCCTTTCCAGGATACACAAGGTTaGTGTCGGTCAGCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: DGFLGSFSMSLAEPPKPFQDTQG*CRSAPL Trigger: CAGTGGTGCTGACCGACACAAACCTTGTGTATCCTG...GAAAGGCTTTGGGGGTTCAGCTAGAGACATGGAAAAGCTGCCTAGAAAGCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAATGGGAGTGGAGTCAACTACCCTGCCTTGCCTCAGACACCTGCCTCCACAGAGAAATCTCCGTaGCCAATATTCTCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPNGSGVNYPALPQTPASTEKSP*PIFSCR Trigger: CCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGT...GGAGGCAGGTGTCTGAGGCAAGGCAGGGTAGTTGACTCCACTCCCATTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACACTTGTTGCCAATATTCTCTaGCAGGTATTCGAGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSWAWTPVYEGIQTPPTLVANIL*QVFEVP Trigger: TGGGACCTCGAATACCTGCAAGAGAATATTGGCAAC...AAGTGTGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 90 bp | GTGCTGGCACTGTACACAGAGAAATCTCCGTTGCCAATATTCTCTTaGAGGTATTCGAGGTCCCACTTCAGTGCAGGATACACAAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLALYTEKSPLPIFS*RYSRSHFSAGYTRF Trigger: AAACCTTGTGTATCCTGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGCTGGGCCTGGACTCCAGTCTATGAAGGCATACAAACTCCACCCACACTTTTAATTTCCTCCCTGTaGGACCTTGGCTTAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWAWTPVYEGIQTPPTLLISSL*DLGLKF Trigger: GAACTTTAAGCCAAGGTCCAACAGGGAGGAAATTAA...AAGTGTGGGTGGAGTTTGTATGCCTTCATAGACTGGAGTCCAGGCCCAGCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 90 bp | ATAAGAACTTATGGGTGCTGGCACTGTACACAGAGAAATCTCCGTTaGCAATATTCTCTTGCAGGTATTCGAGGTCCCACTTCAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRTYGCWHCTQRNLR*QYSLAGIRGPTSVQ Trigger: CTGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATAAGTTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS TCA 90 bp | TCTCCCCCGCGCTGCTGTATAGCTTGTAGTTTCTCAACGAACTCATaGAATTTAATTTCCTCCCTGTTGGACCTTGGCTTAAAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPRCCIACSFSTNS*NLISSLLDLGLKFW Trigger: CCAGAACTTTAAGCCAAGGTCCAACAGGGAGGAAATTAAATTTCATGAGTTCGTTGAGAAACTACAAGCTATACAGCAGCGCGGGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 90 bp | GGAAATTGCCCATCTTCTTCTCATCATAGTATAAGAACTTATGGGTaGTGGCACTGTACACAGAGAAATCTCCGTTGCCAATATTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNCPSSSHHSIRTYG*WHCTQRNLRCQYSL Trigger: AAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATAAGTTCTTATACTATGATGAGAAGAAGATGGGCAATTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 90 bp | AATTGCCCATCTTCTTCTCATCATAGTATAAGAACTTATGGGTGCTaGCACTGTACACAGAGAAATCTCCGTTGCCAATATTCTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NCPSSSHHSIRTYGC*HCTQRNLRCQYSLA Trigger: TGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATAAGTTCTTATACTATGATGAGAAGAAGATGGGCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 90 bp | TTTCTCAACGAACTCATGAAATTTAATTTCCTCCCTGTTGGACCTTaGCTTAAAGTTCTGGAAATTGCCCATCTTCTTCTCATCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLNELMKFNFLPVGP*LKVLEIAHLLLIIV Trigger: TACTATGATGAGAAGAAGATGGGCAATTTCCAGAACTTTAAGCCAAGGTCCAACAGGGAGGAAATTAAATTTCATGAGTTCGTTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 72 bp | CCCGAGGGTCACTCTGGCTCAGACGTGGGATGGGCCTaGTCGGAAAGCTGTAACTTCGTAGCTGGGACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PEGHSGSDVGWA*SESCNFVAGTH Trigger: ATGAGTCCCAGCTACGAAGTTACAGCTTTCCGACCAGGCCCATCCCACGTCTGAGCCAGAGTGACCCTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS TCA 72 bp | TTGTGTCGGTCAGCACCACTGGCTCCTCATTTTCGATaGGCTCTTCCGCCCGAGGGTCACTCTGGCTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LCRSAPLAPHFR*ALPPEGHSGSD Trigger: GTCTGAGCCAGAGTGACCCTCGGGCGGAAGAGCTCATCGAAAATGAGGAGCCAGTGGTGCTGACCGACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 72 bp | ACAATCTTCCTCCCCACGGTGTCATTGAGTGTCTGCTaGAGATACAACCGCTCTTCTCCCCCGCGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TIFLPTVSLSVC*RYNRSSPPRCC Trigger: ACAGCAGCGCGGGGGAGAAGAGCGGTTGTATCTGCAGCAGACACTCAATGACACCGTGGGGAGGAAGATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 72 bp | CCTTCCATGCCAATGAGCAACAGGTTAGAGGTCAGCTaGCCCCAGCCGCGTTTCCCCTGCTGTTTATTGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSMPMSNRLEVS*PQPRFPCCLLI Trigger: GATCAATAAACAGCAGGGGAAACGCGGCTGGGGGCAGCTGACCTCTAACCTGTTGCTCATTGGCATGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 72 bp | TGCAGGATACACAAGGTTTGTGTCGGTCAGCACCACTaGCTCCTCATTTTCGATGAGCTCTTCCGCCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRIHKVCVGQHH*LLIFDELFRPR Trigger: CCTCGGGCGGAAGAGCTCATCGAAAATGAGGAGCCAGTGGTGCTGACCGACACAAACCTTGTGTATCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CAA 72 bp | ATTCGAGGTCCCACTTCAGTGCAGGATACACAAGGTTaGTGTCGGTCAGCACCACTGGCTCCTCATTTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: IRGPTSVQDTQG*CRSAPLAPHFR Trigger: TCGAAAATGAGGAGCCAGTGGTGCTGACCGACACAAACCTTGTGTATCCTGCACTGAAGTGGGACCTCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CAA 90 bp | GGTGCTGGCACTGTACACAGAGAAATCTCCGTTGCCAATATTCTCTaGCAGGTATTCGAGGTCCCACTTCAGTGCAGGATACACAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GAGTVHREISVANIL*QVFEVPLQCRIHKV Trigger: AACCTTGTGTATCCTGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 72 bp | AATATTCTCTTGCAGGTATTCGAGGTCCCACTTCAGTaGAGGATACACAAGGTTTGTGTCGGTCAGCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: NILLQVFEVPLQ*RIHKVCVGQHH Trigger: GTGGTGCTGACCGACACAAACCTTGTGTATCCTGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 72 bp | TATGGGTGCTGGCACTGTACACAGAGAAATCTCCGTTaGCAATATTCTCTTGCAGGTATTCGAGGTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: YGCWHCTQRNLR*QYSLAGIRGPT Trigger: AGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CAA 72 bp | TTATGGGTGCTGGCACTGTACACAGAGAAATCTCCGTaGCCAATATTCTCTTGCAGGTATTCGAGGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LWVLALYTEKSP*PIFSCRYSRSH Trigger: GTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 72 bp | CTGTACACAGAGAAATCTCCGTTGCCAATATTCTCTTaGAGGTATTCGAGGTCCCACTTCAGTGCAGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: LYTEKSPLPIFS*RYSRSHFSAGY Trigger: GTATCCTGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CAA 90 bp | TATAAGAACTTATGGGTGCTGGCACTGTACACAGAGAAATCTCCGTaGCCAATATTCTCTTGCAGGTATTCGAGGTCCCACTTCAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: YKNLWVLALYTEKSP*PIFSCRYSRSHFSA Trigger: TGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATAAGTTCTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 72 bp | CAACCACTGTCTCATAACCAACCACATTTCGGAAATTaGGGAACCTCTCGTAGTCAGGATTGTCAAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPLSHNQPHFGN*GTSRSQDCQSP Trigger: TGGACTTTGACAATCCTGACTACGAGAGGTTCCCCAATTTCCGAAATGTGGTTGGTTATGAGACAGTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CAA 72 bp | ACTGTACACAGAGAAATCTCCGTTGCCAATATTCTCTaGCAGGTATTCGAGGTCCCACTTCAGTGCAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: TVHREISVANIL*QVFEVPLQCRI Trigger: TATCCTGCACTGAAGTGGGACCTCGAATACCTGCAAGAGAATATTGGCAACGGAGATTTCTCTGTGTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS GCA 72 bp | CCATCTTCTTCTCATCATAGTATAAGAACTTATGGGTaGTGGCACTGTACACAGAGAAATCTCCGTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSSSHHSIRTYG*WHCTQRNLRCQ Trigger: TTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATAAGTTCTTATACTATGATGAGAAGAAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS TCA 72 bp | CGCTGCTGTATAGCTTGTAGTTTCTCAACGAACTCATaGAATTTAATTTCCTCCCTGTTGGACCTTGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RCCIACSFSTNS*NLISSLLDLGL Trigger: TAAGCCAAGGTCCAACAGGGAGGAAATTAAATTTCATGAGTTCGTTGAGAAACTACAAGCTATACAGCAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 72 bp | TCTTCTTCTCATCATAGTATAAGAACTTATGGGTGCTaGCACTGTACACAGAGAAATCTCCGTTGCCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSHHSIRTYGC*HCTQRNLRCQY Trigger: ATATTGGCAACGGAGATTTCTCTGTGTACAGTGCCAGCACCCATAAGTTCTTATACTATGATGAGAAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||
| CDS CCA 72 bp | GAACTCATGAAATTTAATTTCCTCCCTGTTGGACCTTaGCTTAAAGTTCTGGAAATTGCCCATCTTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELMKFNFLPVGP*LKVLEIAHLLL Trigger: GAGAAGAAGATGGGCAATTTCCAGAACTTTAAGCCAAGGTCCAACAGGGAGGAAATTAAATTTCATGAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040455.5 |
||