Pregenerated sensors for HIF1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021109Ensembl transcript IDs: ENSMUST00000021530.8, ENSMUST00000110461.8, ENSMUST00000110464.8
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTGCATGTAGGACAAGTGATCCACCTCTGACTTGGAAATTACCCTCCTCCTGTCTAATCTTACATTTTTaGGTTCTAGGATGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: FACRTSDPPLTWKLPSSCLILHF*VLGCIF Trigger: GAAGATGCATCCTAGAACCCAAAAATGTAAGATTAG...ACAGGAGGAGGGTAATTTCCAAGTCAGAGGTGGATCACTTGTCCTACATGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| 3UTR-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGCTGTGAATGTGCTGTaGTCTGGCATTAAAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: LHNISISFHNYRGTVLSWAVNVL*SGIKRT Trigger: TGTTCTTTTAATGCCAGATCACAGCACATTCACAGC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAGATCAACAGCTTCATaGTCCAGGCTTAACAATTCC | + |
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Preference number: 2 (lower is better) Translates to: LHNISISFHNYRGTVLSWRSTAS*SRLNNS Trigger: GGAATTGTTAAGCCTGGATCATGAAGCTGTTGATCT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGCTACCATGTACTGCTaGCAAAGCATTATTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: LHNISISFHNYRGTVLSWATMYC*QSIIFM Trigger: CATGAAAATAATGCTTTGTCAGCAGTACATGGTAGC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAACTATCTGAGTTTGTaGAGTATTGTAGCCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LHNISISFHNYRGTVLSWNYLSL*SIVARL Trigger: AAGCCTGGCTACAATACTGCACAAACTCAGATAGTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTATATTGTGCAATTGTaGCTACCATGTACTGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LHNISISFHNYRGTVLSWYIVQL*LPCTAD Trigger: GTCAGCAGTACATGGTAGCCACAATTGCACAATATA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAAGGTGCATTTTAAATaGCACTACAGCAATGCAATG | + |
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Preference number: 2 (lower is better) Translates to: LHNISISFHNYRGTVLSWKVHFK*HYSNAM Trigger: CATTGCATTGCTGTAGTGTCATTTAAAATGCACCTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR TCA 72 bp | CAGTGCCTTTTGCATGTAGGACAAGTGATCCACCTCTaGCTTGGAAATTACCCTCCTCCTGTCTCAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QCLLHVGQVIHL*LGNYPPPVSVS Trigger: GGAGACTGAGACAGGAGGAGGGTAATTTCCAAGTCAGAGGTGGATCACTTGTCCTACATGCAAAAGGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| 3UTR TCA 72 bp | GAAATGTTGAGACAAATGTTATTTAAACGTAAGCGCTaGCCCAGGGGGCCTGGTCCACAGAAGATGTTTATT | + |
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Preference number: 3 (lower is better) Translates to: EMLRQMLFKRKR*PRGPGPQKMFI Trigger: AATAAACATCTTCTGTGGACCAGGCCCCCTGGGTCAGCGCTTACGTTTAAATAACATTTGTCTCAACATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR TCA 72 bp | CAATTACACACAAGTAGTAACAGATTAGGGAAATGGTaGCAGGAACCAAGGGTGGAGTTGATGATGCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLHTSSNRLGKW*QEPRVELMMLK Trigger: CTTGAGCATCATCAACTCCACCCTTGGTTCCTGTCACCATTTCCCTAATCTGTTACTACTTGTGTGTAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| 3UTR GCA 72 bp | CCTCAAACAAAAGAACTTCATGACTTTTGTGTTCACTaGTTGCAGTACCACAGCAAGAAGTCAGTGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PQTKELHDFCVH*LQYHSKKSVPF Trigger: AAAAGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGTGAACACAAAAGTCATGAAGTTCTTTTGTTTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| 3UTR-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTAAACTATCTGAGTTaGTGCAGTATTGTAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LHNISISFHNYRGTVLSWLNYLS*CSIVAR Trigger: CCTGGCTACAATACTGCACAAACTCAGATAGTTTAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTCAAACAAAAGAACTTCATGACTTTTGTGTTCACTGCTTGCAGTACCACGCTAATCTTACATTTTaGGGTTCTAGGATGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: FPQTKELHDFCVHCLQYHANLTF*GSRMHL Trigger: AAGATGCATCCTAGAACCCAAAAATGTAAGATTAGC...GTGGTACTGCAAGCAGTGAACACAAAAGTCATGAAGTTCTTTTGTTTGAGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| 3UTR-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAAATATATTGTGCAATaGTGGCTACCATGTACTGCT | + |
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Preference number: 3 (lower is better) Translates to: LHNISISFHNYRGTVLSWKYIVQ*WLPCTA Trigger: AGCAGTACATGGTAGCCACAATTGCACAATATATTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | ACTGCTTGCAGTACCACAGCAAGAAGTCAGTGCCTTTTGCATGTAGGACAAGTGCACATTGTGGGGAAGTaGCAACTGATGAGCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TACSTTARSQCLLHVGQVHIVGK*QLMSKL Trigger: GAGCTTGCTCATCAGTTGCCACTTCCCCACAATGTG...CACTTGTCCTACATGCAAAAGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR GCA 90 bp | ACTGCTTGCAGTACCACAGCAAGAAGTCAGTGCCTTTTGCATGTAGGACAAGTGGCTTCGCCGAGATCTTaGTGCATCTCTAGACTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TACSTTARSQCLLHVGQVASPRS*CISRLF Trigger: GAAAAGTCTAGAGATGCAGCAAGATCTCGGCGAAGC...CACTTGTCCTACATGCAAAAGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR GCA 90 bp | CTGACTTGGAAATTACCCTCCTCCTGTCTCAGTCTCCTCATAGCTAAGATTACACATGAATATGGCCCGTaGAGTGAAGCACCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LTWKLPSSCLSLLIAKITHEYGP*SEAPST Trigger: CGTGGAAGGTGCTTCACTGCACGGGCCATATTCATG...TGTAATCTTAGCTATGAGGAGACTGAGACAGGAGGAGGGTAATTTCCAAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR CCA 90 bp | TTTGCATGTAGGACAAGTGATCCACCTCTGACTTGGAAATTACCCTCCTCCTGTCAAGCACGTCATGGGTaGTTTCTTGTACCCACACTG | + |
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Preference number: 4 (lower is better) Translates to: FACRTSDPPLTWKLPSSCQARHG*FLVPTL Trigger: CAGTGTGGGTACAAGAAACCACCCATGACGTGCTTG...ACAGGAGGAGGGTAATTTCCAAGTCAGAGGTGGATCACTTGTCCTACATGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTGGAGCCAGCAGAGTaGGAGCATCAGGCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLEPAE*EHQAPS Trigger: AGAAGGAGCCTGATGCTCTCACTCTGCTGGCTCCAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCCTGCTCTGTCTGGTaGGGCTGTCCGACTGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSCSVW*GCPTVS Trigger: ACTCACAGTCGGACAGCCTCACCAGACAGAGCAGGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCAAAATCCAGAGAGATaGTGGTGTCGCCGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWQNPER*WCRRQL Trigger: CAGCTGCCGGCGACACCATCATCTCTCTGGATTTTG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGAGGCTGTCCGACTGTaGGTGCCACTGTATGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWEAVRL*VPLYAD Trigger: ATCAGCATACAGTGGCACTCACAGTCGGACAGCCTC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCCACTCTCATCCATTaGCTGCCCCAGCAGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSTLIH*LPQQSA Trigger: TGCAGACTGCTGGGGCAGTCAATGGATGAGAGTGGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCAAACAAAAGAACTTCATGACTTTTGTGTTCACTGCTTGCAGTACCACGCACCAAGCACGTCATaGGTGGTTTCTTGTACCCAC | + |
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Preference number: 4 (lower is better) Translates to: FPQTKELHDFCVHCLQYHAPSTS*VVSCTH Trigger: GTGGGTACAAGAAACCACCCATGACGTGCTTGGTGC...GTGGTACTGCAAGCAGTGAACACAAAAGTCATGAAGTTCTTTTGTTTGAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR TCA 90 bp | CTGACTTGGAAATTACCCTCCTCCTGTCTCAGTCTCCTCATAGCTAAGATTACAAGCTTTATCAAGATGTaGGCTCACATTGTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LTWKLPSSCLSLLIAKITSFIKM*AHIVGK Trigger: CTTCCCCACAATGTGAGCTCACATCTTGATAAAGCT...TGTAATCTTAGCTATGAGGAGACTGAGACAGGAGGAGGGTAATTTCCAAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAGTGCCACTGTATGCTaGTGCCTTAGCAGTGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSATVC*CLSSGR Trigger: ACGACCACTGCTAAGGCATCAGCATACAGTGGCACT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR GCA 90 bp | CTTCATGACTTTTGTGTTCACTGCTTGCAGTACCACAGCAAGAAGTCAGTGCCTTCGCCGAGATCTTGCTaGATCTCTAGACTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LHDFCVHCLQYHSKKSVPSPRSC*ISRLFF Trigger: AAAGAAAAGTCTAGAGATGCAGCAAGATCTCGGCGA...AGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGTGAACACAAAAGTCATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCATGAATATGGCCCGTaGAGTGAAGCACCTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWHEYGP*SEAPST Trigger: CGTGGAAGGTGCTTCACTGCACGGGCCATATTCATG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGACTGCCCCAGCAGTCTaGATGCTAAATCGGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWTAPAV*MLNRRV Trigger: TACCCTCCGATTTAGCATGCAGACTGCTGGGGCAGT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTCTCATCCATTGACTaGCCCAGCAGTCTGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLSSID*PSSLHA Trigger: AGCATGCAGACTGCTGGGGCAGTCAATGGATGAGAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGCACCAAGCACGTCATaGGTGGTTTCTTGTACCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWAPSTS*VVSCTH Trigger: GTGGGTACAAGAAACCACCCATGACGTGCTTGGTGC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | CTGACTTGGAAATTACCCTCCTCCTGTCTCAGTCTCCTCATAGCTAAGATTACATTGACGGATGAGGAATaGGTTCACAAATCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: LTWKLPSSCLSLLIAKITLTDEE*VHKSAP Trigger: TGGTGCTGATTTGTGAACCCATTCCTCATCCGTCAA...TGTAATCTTAGCTATGAGGAGACTGAGACAGGAGGAGGGTAATTTCCAAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR TCA 90 bp | AAATTACCCTCCTCCTGTCTCAGTCTCCTCATAGCTAAGATTACAGGAGGATGCTCATGGTCACATGGATaGGTAAAATCAAACACACTG | + |
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Preference number: 4 (lower is better) Translates to: KLPSSCLSLLIAKITGGCSWSHG*VKSNTL Trigger: CAGTGTGTTTGATTTTACTCATCCATGTGACCATGA...GCATCCTCCTGTAATCTTAGCTATGAGGAGACTGAGACAGGAGGAGGGTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCACATTGTGGGGAAGTaGCAACTGATGAGCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWHIVGK*QLMSKL Trigger: GAGCTTGCTCATCAGTTGCCACTTCCCCACAATGTG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCAAGCACGTCATGGGTaGTTTCTTGTACCCACACTG | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWQARHG*FLVPTL Trigger: CAGTGTGGGTACAAGAAACCACCCATGACGTGCTTG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTGATTCATCAGTGGTaGCAGTTGTGGTGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLIHQW*QLWWQW Trigger: CCACTGCCACCACAACTGCCACCACTGATGAATCAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR TCA 90 bp | ACTTTTGTGTTCACTGCTTGCAGTACCACAGCAAGAAGTCAGTGCCTTTTGCATTCAATATTTGACGGATaGGGAATGGGTTCACAAATC | + |
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Preference number: 4 (lower is better) Translates to: TFVFTACSTTARSQCLLHSIFDG*GMGSQI Trigger: GATTTGTGAACCCATTCCTCATCCGTCAAATATTGA...ATGCAAAAGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGTGAACACAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR TCA 90 bp | ACTTTTGTGTTCACTGCTTGCAGTACCACAGCAAGAAGTCAGTGCCTTTTGCATAGGAATTTCAATATTTaGCGGATGAGGAATGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TFVFTACSTTARSQCLLHRNFNI*RMRNGF Trigger: GAACCCATTCCTCATCCGTCAAATATTGAAATTCCT...ATGCAAAAGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGTGAACACAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCGAGGCTGTGTCGACTaGGAAATGTCTTGCTATCTA | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWRGCVD*EMSCYL Trigger: TAGATAGCAAGACATTTCTCAGTCGACACAGCCTCG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR TCA 90 bp | AATTCCCTCAAACAAAAGAACTTCATGACTTTTGTGTTCACTGCTTGCAGTACCCGAGGCTGTGTCGACTaGGAAATGTCTTGCTATCTA | + |
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Preference number: 4 (lower is better) Translates to: NSLKQKNFMTFVFTACSTRGCVD*EMSCYL Trigger: TAGATAGCAAGACATTTCTCAGTCGACACAGCCTCG...GGTACTGCAAGCAGTGAACACAAAAGTCATGAAGTTCTTTTGTTTGAGGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCCAATTCCTGCTGCTTaGAAAAGGGAGCCATCATGT | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWPIPAA*KREPSC Trigger: ACATGATGGCTCCCTTTTTCAAGCAGCAGGAATTGG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGACTGTTAGGCTCAGGTaGACTTTGTCTAGTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWTVRLR*TLSSAS Trigger: GGAAGCACTAGACAAAGTTCACCTGAGCCTAACAGT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110461.8 |
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| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGCTTCGCCGAGATCTTaGTGCATCTCTAGACTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWASPRS*CISRLF Trigger: GAAAAGTCTAGAGATGCAGCAAGATCTCGGCGAAGC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGATCAGAAGGACTTGCTaGCTGATCTTGAATCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWIRRTC*LILNLG Trigger: CCCCAGATTCAAGATCAGCCAGCAAGTCCTTCTGAT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGTAGGTTTCTGTAACTaGGTCTGCTGGAACCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWVGFCN*VCWNPV Trigger: TACTGGGTTCCAGCAGACCCAGTTACAGAAACCTAC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCAGGTTAAGGCTCCTTaGATGAGCTTTGTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWQVKAP*MSFVCL Trigger: CAGACAGACAAAGCTCATCCAAGGAGCCTTAACCTG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAGCTTTATCAAGATGTaGGCTCACATTGTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSFIKM*AHIVGK Trigger: CTTCCCCACAATGTGAGCTCACATCTTGATAAAGCT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTCTTGTACCCACACTaGGGTTGGTTACTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWFLYPH*GWLLLV Trigger: TACCAACAGTAACCAACCTCAGTGTGGGTACAAGAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGCAGCTTGTATCCTCTaGTTCAACTTTGGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWAACIL*FNFGEQ Trigger: CTGTTCACCAAAGTTGAATCAGAGGATACAAGCTGC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTTCGTCTCTGTTTTTaGTTCATCAGTGGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLRLCF*FISGGS Trigger: ACTGCCACCACTGATGAATCAAAAACAGAGACGAAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTGTCTGTCTGTTCTATaGCTCTCTTTCCTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWCLSVL*LSFLLC Trigger: ACAGAGCAGGAAAGAGAGTCATAGAACAGACAGACA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTAAGGCTCCTTGGATaGGCTTTGTCTGTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLRLLG*ALSVCS Trigger: AGAACAGACAGACAAAGCTCATCCAAGGAGCCTTAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTTGATCCAAAGCTCTaGGTAATTCTTCACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLDPKL*VILHPA Trigger: TGCAGGGTGAAGAATTACTCAGAGCTTTGGATCAAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAAACTTCAGACTCTTTaGTTCGCCGAGATCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWKLQTL*FAEILL Trigger: CAGCAAGATCTCGGCGAAGCAAAGAGTCTGAAGTTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAACCTCTTGATTCAGTaGAGGATCAGCACTACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWNLLIQ*RISTTS Trigger: CGAAGTAGTGCTGATCCTGCACTGAATCAAGAGGTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGAGGGCTTGGAGAATTaGTCTCTAATGGTGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWEGLEN*SLMVTT Trigger: AGTTGTCACCATTAGAGAGCAATTCTCCAAGCCCTC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTGTTCCAATTCCTGCTaGTTGAAAAAGGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWCSNSC*LKKGAI Trigger: GATGGCTCCCTTTTTCAAGCAGCAGGAATTGGAACA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAGTAATTCTTCACCCTaGAGTAGGTTTCTGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSNSSP*SRFLLP Trigger: AGGCAGCAGAAACCTACTGCAGGGTGAAGAATTACT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCAAACAAAAGAACTTCATGACTTTTGTGTTCACTGCTTGCAGTACCACTTTCCCTTTTCTCACTaGGCCATTTCTGTGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPQTKELHDFCVHCLQYHFPFSH*AISVCK Trigger: CTTACACACAGAAATGGCCCAGTGAGAAAAGGGAAA...GTGGTACTGCAAGCAGTGAACACAAAAGTCATGAAGTTCTTTTGTTTGAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTGACGGATGAGGAATaGGTTCACAAATCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLTDEE*VHKSAP Trigger: TGGTGCTGATTTGTGAACCCATTCCTCATCCGTCAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAACTGTGCTCATACTTaGAGGGCTTGGAGAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWNCAHT*RAWRIA Trigger: AGCAATTCTCCAAGCCCTCCAAGTATGAGCACAGTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTTTTGATTCATCAGTaGTGGCAGTTGTGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWFLIHQ*WQLWWQ Trigger: CTGCCACCACAACTGCCACCACTGATGAATCAAAAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTTCACAATCGTAACTaGTCAGCTGTGGTAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLHNRN*SAVVIH Trigger: GTGGATTACCACAGCTGACCAGTTACGATTGTGAAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTGATTCAACTTTGGTaGACAGCTGAGTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWLIQLW*TAESSS Trigger: TGAAGATGACTCAGCTGTTCACCAAAGTTGAATCAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTTAATGCAACCTCTTaGTTCAGTGCAGGATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWFNATS*FSAGSA Trigger: TGCTGATCCTGCACTGAATCAAGAGGTTGCATTAAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGTGTTTACGTTTTCCTaGAGAAGTCTCTCAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWVFTFS*RSLSGE Trigger: TTCACCTGAGAGACTTCTTCAGGAAAACGTAAACAC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021530.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGATCAGTGTCCTGAGTTaGAAATGGATTCTTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWISVLS*KWILCL Trigger: GAGGCAAAGAATCCATTTTCAACTCAGGACACTGAT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCTAATGGTGACAACTaGTCAAAGGAACGTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSNGDN*SKERNW Trigger: CCAGTTACGTTCCTTTGATCAGTTGTCACCATTAGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGGAACAGTATTTCTTTaGTTCAAAGTGGCAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWGTVFL*FKVADR Trigger: CCTGTCTGCCACTTTGAATCAAAGAAATACTGTTCC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGATTTTTCGCTTCCTCTaGGCATTCTGCGAAGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWIFRFL*AFCEAI Trigger: AATAGCTTCGCAGAATGCTCAGAGGAAGCGAAAAAT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCGCCGAGATCTTGCTaGATCTCTAGACTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSPRSC*ISRLFF Trigger: AAAGAAAAGTCTAGAGATGCAGCAAGATCTCGGCGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCAAACAAAAGAACTTCATGACTTTTGTGTTCACTGCTTGCAGTACCACAAAACAGTCCATCTGTaGCTTCATCTCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FPQTKELHDFCVHCLQYHKTVHL*LHLIFT Trigger: AGTGAAGATGAGATGAAGGCACAGATGGACTGTTTT...GTGGTACTGCAAGCAGTGAACACAAAAGTCATGAAGTTCTTTTGTTTGAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCAGTCACCTGGTTGCTaGAATAATGTTCCAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWQSPGC*NNVPIP Trigger: AGGAATTGGAACATTATTGCAGCAACCAGGTGACTG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGCACAGTCACCTGGTTaGTGCAATAATGTTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWAQSPG*CNNVPI Trigger: AATTGGAACATTATTGCAGCAACCAGGTGACTGTGC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTTCCCTTTTCTCACTaGGCCATTTCTGTGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWFPFSH*AISVCK Trigger: CTTACACACAGAAATGGCCCAGTGAGAAAAGGGAAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCATGGTCACATGGATaGGTAAAATCAAACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSWSHG*VKSNTL Trigger: CAGTGTGTTTGATTTTACTCATCCATGTGACCATGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCAATATTTGACGGATaGGGAATGGGTTCACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSIFDG*GMGSQI Trigger: GATTTGTGAACCCATTCCTCATCCGTCAAATATTGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAGGAATTTCAATATTTaGCGGATGAGGAATGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWRNFNI*RMRNGF Trigger: GAACCCATTCCTCATCCGTCAAATATTGAAATTCCT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR GCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAAAACAGTCCATCTGTaGCTTCATCTCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWKTVHL*LHLIFT Trigger: AGTGAAGATGAGATGAAGGCACAGATGGACTGTTTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTATATGACAGTTGCTTaGGTTTCAACCCAGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWYMTVA*VSTQTY Trigger: ATATGTCTGGGTTGAAACTCAAGCAACTGTCATATA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAAGATTCAACTGGTTTaGGCACAGATTCTGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWKIQLV*AQILFV Trigger: AACAAACAGAATCTGTGCTCAAACCAGTTGAATCTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAGTCATCTTCATATCTaGAGATTCAACTGGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWSHLHI*RFNWFE Trigger: CTCAAACCAGTTGAATCTTCAGATATGAAGATGACT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTATCATGGTGAGTTTTaGTCAGATGATCAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWYHGEF*SDDQNP Trigger: TGGATTCTGATCATCTGACCAAAACTCACCATGATA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGAGGTTGGTTACTGTTaGTATCATAGACATGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWEVGYC*YHRHEY Trigger: ATATTCATGTCTATGATACCAACAGTAACCAACCTC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTACTTGGGTAGAAGATaGAGATGCAATCAGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHNISISFHNYRGTVLSWYLGRR*RCNQYF Trigger: AAAATACTGATTGCATCTCCATCTTCTACCCAAGTA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS CCA 90 bp | GTGGTGGCAGTGGCAGTGATGGTAGGTTTCTGTAACTGGGTCTGCTaGAACCCAGTAACTGTGCTCATACTTGGAGGGCTTGGAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: VVAVAVMVGFCNWVC*NPVTVLILGGLGEL Trigger: CAATTCTCCAAGCCCTCCAAGTATGAGCACAGTTACTGGGTTCCAGCAGACCCAGTTACAGAAACCTACCATCACTGCCACTGCCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS CCA 90 bp | ACGTCATGGGTGGTTTCTTGTACCCACACTGAGGTTGGTTACTGTTaGTATCATAGACATGAATATGGCCCGTGCAGTGAAGCACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSWVVSCTHTEVGYC*YHRHEYGPCSEAPS Trigger: GGAAGGTGCTTCACTGCACGGGCCATATTCATGTCTATGATACCAACAGTAACCAACCTCAGTGTGGGTACAAGAAACCACCCATGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 ENSMUST00000110464.8 |
||
| CDS CCA 90 bp | CGGATGAGGAATGGGTTCACAAATCAGCACCAAGCACGTCATGGGTaGTTTCTTGTACCCACACTGAGGTTGGTTACTGTTGGTATCATA | + |
|
Preference number: 5 (lower is better) Translates to: RMRNGFTNQHQARHG*FLVPTLRLVTVGII Trigger: TATGATACCAACAGTAACCAACCTCAGTGTGGGTACAAGAAACCACCCATGACGTGCTTGGTGCTGATTTGTGAACCCATTCCTCATCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 ENSMUST00000110464.8 |
||
| CDS CCA 90 bp | TTGACGGATGAGGAATGGGTTCACAAATCAGCACCAAGCACGTCATaGGTGGTTTCTTGTACCCACACTGAGGTTGGTTACTGTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LTDEEWVHKSAPSTS*VVSCTHTEVGYCWY Trigger: ATACCAACAGTAACCAACCTCAGTGTGGGTACAAGAAACCACCCATGACGTGCTTGGTGCTGATTTGTGAACCCATTCCTCATCCGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 ENSMUST00000110464.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCGTCCTCCCCCGGCTaGTTAGGGTGCACTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWSSSPG*LGCTSF Trigger: GAATGAAGTGCACCCTAACAAGCCGGGGGAGGACGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGATCCACTCTCATCCATaGACTGCCCCAGCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWIHSHP*TAPAVC Trigger: GCAGACTGCTGGGGCAGTCAATGGATGAGAGTGGAT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS TCA 90 bp | GGAAAAGTTAGGAGTGTTTACGTTTTCCTGAAGAAGTCTCTCAGGTaGACTTTGTCTAGTGCTTCCATCAGAAGGACTTGCTGGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GKVRSVYVFLKKSLR*TLSSASIRRTCWLI Trigger: GATCAGCCAGCAAGTCCTTCTGATGGAAGCACTAGACAAAGTTCACCTGAGAGACTTCTTCAGGAAAACGTAAACACTCCTAACTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021530.8 |
||
| CDS TCA 90 bp | CTGGGACTGTTAGGCTGGGAAAAGTTAGGAGTGTTTACGTTTTCCTaGAGAAGTCTCTCAGGTGAACTTTGTCTAGTGCTTCCATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGLLGWEKLGVFTFS*RSLSGELCLVLPSE Trigger: TTCTGATGGAAGCACTAGACAAAGTTCACCTGAGAGACTTCTTCAGGAAAACGTAAACACTCCTAACTTTTCCCAGCCTAACAGTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021530.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTGTGTTCACTGCTTGCAGTACCACAGCAAGAAGTCAGTGCCTTTTGCATGTACCCACACTGAGGTaGGTTACTGTTGGTATCATA | + |
|
Preference number: 5 (lower is better) Translates to: TFVFTACSTTARSQCLLHVPTLR*VTVGII Trigger: TATGATACCAACAGTAACCAACCTCAGTGTGGGTAC...ATGCAAAAGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGTGAACACAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGGAGGGCTTGGAGAATaGCTCTCTAATGGTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWGGLGE*LSNGDN Trigger: GTTGTCACCATTAGAGAGCAATTCTCCAAGCCCTCC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | AAATTACCCTCCTCCTGTCTCAGTCTCCTCATAGCTAAGATTACAGGAGGATGCGTTAACCCCATGTATTaGTTCACGTTATCAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KLPSSCLSLLIAKITGGCVNPMY*FTLSEM Trigger: CATTTCTGATAACGTGAACAAATACATGGGGTTAAC...GCATCCTCCTGTAATCTTAGCTATGAGGAGACTGAGACAGGAGGAGGGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
||
| CDS-3UTR CAA 90 bp | CTTCATGACTTTTGTGTTCACTGCTTGCAGTACCACAGCAAGAAGTCAGTGCCTCGACTGAGAAATGTCTaGCTATCTAAAGGAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHDFCVHCLQYHSKKSVPRLRNV*LSKGIS Trigger: TGAAATTCCTTTAGATAGCAAGACATTTCTCAGTCG...AGGCACTGACTTCTTGCTGTGGTACTGCAAGCAGTGAACACAAAAGTCATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGACTTGCTGGCTGATCTaGAATCTGGGGCATGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWTCWLI*NLGHGK Trigger: TTTACCATGCCCCAGATTCAAGATCAGCCAGCAAGT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCCTTCGTCTCTGTTTTaGATTCATCAGTGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWPSSLF*IHQWWQ Trigger: CTGCCACCACTGATGAATCAAAAACAGAGACGAAGG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCGTTTCTTGAGGTACTaGGGTAGAAGATGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWRFLRY*GRRWRC Trigger: GCATCTCCATCTTCTACCCAAGTACCTCAAGAAACG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAGCAGTGGTCGTTTCTaGAGGTACTTGGGTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWSSGRF*RYLGRR Trigger: TCTTCTACCCAAGTACCTCAAGAAACGACCACTGCT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCCAATTCCTGCTGCTaGAAAAAGGGAGCCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWSNSCC*KKGAIM Trigger: CATGATGGCTCCCTTTTTCAAGCAGCAGGAATTGGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAAAACTTCAGACTCTTaGCTTCGCCGAGATCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWKTSDS*LRRDLA Trigger: AGCAAGATCTCGGCGAAGCAAAGAGTCTGAAGTTTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCCTCAAACAAAAGAACTTCATGACTTTTGTGTTCACTGCTTGCAGTACCAAAACTTCAGACTCTTaGCTTCGCCGAGATCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLKQKNFMTFVFTACSTKTSDS*LRRDLA Trigger: AGCAAGATCTCGGCGAAGCAAAGAGTCTGAAGTTTT...GGTACTGCAAGCAGTGAACACAAAAGTCATGAAGTTCTTTTGTTTGAGGGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110464.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGTACCCACACTGAGGTaGGTTACTGTTGGTATCATA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWVPTLR*VTVGII Trigger: TATGATACCAACAGTAACCAACCTCAGTGTGGGTAC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGACATATCCACCTCTTTaGGCAAGCATCCTGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWTYPPL*ASILYC Trigger: ACAGTACAGGATGCTTGCCAAAAGAGGTGGATATGT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTACTTCGAAGTGGCTTaGGAGTTTCCGATGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWYFEVA*EFPMKV Trigger: TACCTTCATCGGAAACTCCAAAGCCACTTCGAAGTA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTTCCATCAGAAGGACTaGCTGGCTGATCTTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWFHQKD*LADLES Trigger: AGATTCAAGATCAGCCAGCAAGTCCTTCTGATGGAA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCATACTTGGAGGGCTaGGAGAATTGCTCTCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWSYLEG*ENCSLM Trigger: CATTAGAGAGCAATTCTCCAAGCCCTCCAAGTATGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS TCA 90 bp | TCAAAAAGGCAGCTTGTATCCTCTGATTCAACTTTGGTGAACAGCTaGGTCATCTTCATATCTGAAGATTCAACTGGTTTGAGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKRQLVSSDSTLVNS*VIFISEDSTGLSTD Trigger: ATCTGTGCTCAAACCAGTTGAATCTTCAGATATGAAGATGACTCAGCTGTTCACCAAAGTTGAATCAGAGGATACAAGCTGCCTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCTGTCCTGTGGTGACTaGTCCTTTAGTAAACATATC | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWLSCGD*SFSKHI Trigger: GATATGTTTACTAAAGGACAAGTCACCACAGGACAG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCCACCAGTTCCAACTaGAATACATTGACCATATCG | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWSTSSN*NTLTIS Trigger: CGATATGGTCAATGTATTCAAGTTGGAACTGGTGGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGCGAAGCTATTGTCTTaGGGTTTAATTCTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWAKLLS*GLILPQ Trigger: CTGAGGAAGAATTAAACCCAAAGACAATAGCTTCGC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGAAGATTCAACTGGTTaGAGCACAGATTCTGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWEDSTG*STDSVC Trigger: ACAAACAGAATCTGTGCTCAAACCAGTTGAATCTTC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTCCAACTTGAATACATaGACCATATCGCTATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWSNLNT*TISLST Trigger: TGTGGATAGCGATATGGTCAATGTATTCAAGTTGGA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAATCAGTGTCCTGAGTaGAAAATGGATTCTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWNQCPE*KMDSLP Trigger: AGGCAAAGAATCCATTTTCAACTCAGGACACTGATT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 90 bp | GAGGGAAACATTACATCATTATATAATGGAACATCTTCAAGTTGTTaGTCTTCAGTTTCTGTGTCATCGCTGCCAAAATCCAGAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: EGNITSLYNGTSSSC*SSVSVSSLPKSREM Trigger: CATCTCTCTGGATTTTGGCAGCGATGACACAGAAACTGAAGATCAACAACTTGAAGATGTTCCATTATATAATGATGTAATGTTTCCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGGTTAACCCCATGTATTaGTTCACGTTATCAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWVNPMY*FTLSEM Trigger: CATTTCTGATAACGTGAACAAATACATGGGGTTAAC...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCGACTGAGAAATGTCTaGCTATCTAAAGGAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWRLRNV*LSKGIS Trigger: TGAAATTCCTTTAGATAGCAAGACATTTCTCAGTCG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGATATATGACAGTTGCTaGAGTTTCAACCCAGACATA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWIYDSC*SFNPDI Trigger: TATGTCTGGGTTGAAACTCAAGCAACTGTCATATAT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTATCAAAAAGGCAGCTaGTATCCTCTGATTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWYQKGS*YPLIQL Trigger: AAGTTGAATCAGAGGATACAAGCTGCCTTTTTGATA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGAACATCTTCAAGTTGTaGATCTTCAGTTTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWNIFKL*IFSFCV Trigger: GACACAGAAACTGAAGATCAACAACTTGAAGATGTT...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGTGGAACATCTTCAAGTaGTTGATCTTCAGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWWNIFK*LIFSFC Trigger: ACAGAAACTGAAGATCAACAACTTGAAGATGTTCCA...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATATTAGCATAAGCTTCCACAACTACAGAGGGACTGTTTTGAGTTGGCCAGTGACTCTGGACTaGATTCTAATTTTAATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHNISISFHNYRGTVLSWPVTLD*ILILMQ Trigger: TTGCATTAAAATTAGAATCAAGTCCAGAGTCACTGG...CCAACTCAAAACAGTCCCTCTGTAGTTGTGGAAGCTTATGCTAATATTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS CCA 72 bp | GCCAAAATCCAGAGAGATGATGGTGTCGCCGGCAGCTaGAGCCAGCAGAGTGAGAGCATCAGGCTCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AKIQRDDGVAGS*SQQSESIRLLL Trigger: AAGAAGGAGCCTGATGCTCTCACTCTGCTGGCTCCAGCTGCCGGCGACACCATCATCTCTCTGGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS TCA 72 bp | CTCTTTCCTGCTCTGTCTGGTGAGGCTGTCCGACTGTaGGTGCCACTGTATGCTGATGCCTTAGCAGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LFPALSGEAVRL*VPLYADALAVV Trigger: GACCACTGCTAAGGCATCAGCATACAGTGGCACTCACAGTCGGACAGCCTCACCAGACAGAGCAGGAAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS CCA 72 bp | GTGGCAGTGATGGTAGGTTTCTGTAACTGGGTCTGCTaGAACCCAGTAACTGTGCTCATACTTGGAGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VAVMVGFCNWVC*NPVTVLILGGL Trigger: AAGCCCTCCAAGTATGAGCACAGTTACTGGGTTCCAGCAGACCCAGTTACAGAAACCTACCATCACTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS CAA 90 bp | CAGCACCAAGCACGTCATGGGTGGTTTCTTGTACCCACACTGAGGTaGGTTACTGTTGGTATCATAGACATGAATATGGCCCGTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QHQARHGWFLVPTLR*VTVGIIDMNMARAV Trigger: CACTGCACGGGCCATATTCATGTCTATGATACCAACAGTAACCAACCTCAGTGTGGGTACAAGAAACCACCCATGACGTGCTTGGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 ENSMUST00000110464.8 |
||
| CDS TCA 72 bp | CCACTGTATGCTGATGCCTTAGCAGTGGTCGTTTCTTaGGGTACTTGGGTAGAAGATGGAGATGCAATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLYADALAVVVS*GTWVEDGDAIS Trigger: ACTGATTGCATCTCCATCTTCTACCCAAGTACCTCAAGAAACGACCACTGCTAAGGCATCAGCATACAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS CCA 72 bp | AATGGGTTCACAAATCAGCACCAAGCACGTCATGGGTaGTTTCTTGTACCCACACTGAGGTTGGTTACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: NGFTNQHQARHG*FLVPTLRLVTV Trigger: AACAGTAACCAACCTCAGTGTGGGTACAAGAAACCACCCATGACGTGCTTGGTGCTGATTTGTGAACCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 ENSMUST00000110464.8 |
||
| CDS CAA 72 bp | GATTCAGTGCAGGATCAGCACTACTTCGAAGTGGCTTaGGAGTTTCCGATGAAGGTAAAGGAGACATTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DSVQDQHYFEVA*EFPMKVKETLP Trigger: TGGCAATGTCTCCTTTACCTTCATCGGAAACTCCAAAGCCACTTCGAAGTAGTGCTGATCCTGCACTGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
||
| CDS CCA 72 bp | GTGGTTTCTTGTACCCACACTGAGGTTGGTTACTGTTaGTATCATAGACATGAATATGGCCCGTGCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: VVSCTHTEVGYC*YHRHEYGPCSE Trigger: TTCACTGCACGGGCCATATTCATGTCTATGATACCAACAGTAACCAACCTCAGTGTGGGTACAAGAAACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 ENSMUST00000110464.8 |
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| CDS CAA 90 bp | CAACCTCTTGATTCAGTGCAGGATCAGCACTACTTCGAAGTGGCTTaGGAGTTTCCGATGAAGGTAAAGGAGACATTGCCAGGTTTATAT | + |
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Preference number: 6 (lower is better) Translates to: QPLDSVQDQHYFEVA*EFPMKVKETLPGLY Trigger: ATATAAACCTGGCAATGTCTCCTTTACCTTCATCGGAAACTCCAAAGCCACTTCGAAGTAGTGCTGATCCTGCACTGAATCAAGAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 72 bp | AGGAGTGTTTACGTTTTCCTGAAGAAGTCTCTCAGGTaGACTTTGTCTAGTGCTTCCATCAGAAGGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: RSVYVFLKKSLR*TLSSASIRRTC Trigger: GCAAGTCCTTCTGATGGAAGCACTAGACAAAGTTCACCTGAGAGACTTCTTCAGGAAAACGTAAACACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021530.8 |
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| CDS TCA 72 bp | GGAGGGCTTGGAGAATTGCTCTCTAATGGTGACAACTaGTCAAAGGAACGTAACTGGAAATCATCATCCATT | + |
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Preference number: 6 (lower is better) Translates to: GGLGELLSNGDN*SKERNWKSSSI Trigger: AATGGATGATGATTTCCAGTTACGTTCCTTTGATCAGTTGTCACCATTAGAGAGCAATTCTCCAAGCCCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CCA 72 bp | TCTTTGATTCAAAGTGGCAGACAGGTTAAGGCTCCTTaGATGAGCTTTGTCTGTCTGTTCTATGACTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLIQSGRQVKAP*MSFVCLFYDSL Trigger: AAGAGAGTCATAGAACAGACAGACAAAGCTCATCCAAGGAGCCTTAACCTGTCTGCCACTTTGAATCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 72 bp | AAAAGGGAGCCATCATGTTCCATTTTTCGCTTCCTCTaGGCATTCTGCGAAGCTATTGTCTTTGGGTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: KREPSCSIFRFL*AFCEAIVFGFN Trigger: ATTAAACCCAAAGACAATAGCTTCGCAGAATGCTCAGAGGAAGCGAAAAATGGAACATGATGGCTCCCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS GCA 72 bp | CTGTGGCTGGGAGTTCTTCGTATTATATATGACAGTTaGTTGAGTTTCAACCCAGACATATCCACCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LWLGVLRIIYDS*LSFNPDISTSF Trigger: AAAAGAGGTGGATATGTCTGGGTTGAAACTCAAGCAACTGTCATATATAATACGAAGAACTCCCAGCCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CAA 72 bp | CCATTTTTCGCTTCCTCTGAGCATTCTGCGAAGCTATaGTCTTTGGGTTTAATTCTTCCTCAGGAACAGTAT | + |
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Preference number: 6 (lower is better) Translates to: PFFASSEHSAKL*SLGLILPQEQY Trigger: ATACTGTTCCTGAGGAAGAATTAAACCCAAAGACAATAGCTTCGCAGAATGCTCAGAGGAAGCGAAAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CAA 90 bp | GTGTCTTCAGCAAACAGTTTTTCCACCAGTTCCAACTTGAATACATaGACCATATCGCTATCCACATCAAAGCAATATTCACTGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: VSSANSFSTSSNLNT*TISLSTSKQYSLGL Trigger: CAGTCCCAGTGAATATTGCTTTGATGTGGATAGCGATATGGTCAATGTATTCAAGTTGGAACTGGTGGAAAAACTGTTTGCTGAAGACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CAA 90 bp | TTTTGGTCAGATGATCAGAATCCAAAGCATGATAATATTCATAAATaGAGCGGCCCAAAAGTTCTTCCGGCTCATAACCCATCAACTCAG | + |
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Preference number: 6 (lower is better) Translates to: FWSDDQNPKHDNIHK*SGPKVLPAHNPSTQ Trigger: CTGAGTTGATGGGTTATGAGCCGGAAGAACTTTTGGGCCGCTCAATTTATGAATATTATCATGCTTTGGATTCTGATCATCTGACCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 72 bp | CAGCTTGTATCCTCTGATTCAACTTTGGTGAACAGCTaGGTCATCTTCATATCTGAAGATTCAACTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: QLVSSDSTLVNS*VIFISEDSTGL Trigger: CAAACCAGTTGAATCTTCAGATATGAAGATGACTCAGCTGTTCACCAAAGTTGAATCAGAGGATACAAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CCA 72 bp | ACCACTTACAACATAATTCACACACACAATGCACTGTaGCTGGGAGTTCTTCGTATTATATATGACAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: TTYNIIHTHNAL*LGVLRIIYDSC Trigger: GCAACTGTCATATATAATACGAAGAACTCCCAGCCACAGTGCATTGTGTGTGTGAATTATGTTGTAAGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CAA 72 bp | GTGTCTTCAGCAAACAGTTTTTCCACCAGTTCCAACTaGAATACATTGACCATATCGCTATCCACATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSSANSFSTSSN*NTLTISLSTSK Trigger: CTTTGATGTGGATAGCGATATGGTCAATGTATTCAAGTTGGAACTGGTGGAAAAACTGTTTGCTGAAGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CAA 90 bp | TTTGCCTCTGTGTCTTCAGCAAACAGTTTTTCCACCAGTTCCAACTaGAATACATTGACCATATCGCTATCCACATCAAAGCAATATTCA | + |
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Preference number: 6 (lower is better) Translates to: FASVSSANSFSTSSN*NTLTISLSTSKQYS Trigger: TGAATATTGCTTTGATGTGGATAGCGATATGGTCAATGTATTCAAGTTGGAACTGGTGGAAAAACTGTTTGCTGAAGACACAGAGGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CAA 90 bp | CATCATGTTCCATTTTTCGCTTCCTCTGAGCATTCTGCGAAGCTATaGTCTTTGGGTTTAATTCTTCCTCAGGAACAGTATTTCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: HHVPFFASSEHSAKL*SLGLILPQEQYFFD Trigger: ATCAAAGAAATACTGTTCCTGAGGAAGAATTAAACCCAAAGACAATAGCTTCGCAGAATGCTCAGAGGAAGCGAAAAATGGAACATGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 72 bp | GCTGAGTCATCTTCATATCTGAAGATTCAACTGGTTTaGGCACAGATTCTGTTTGTTGAAGGGAGAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: AESSSYLKIQLV*AQILFVEGRKS Trigger: TGATTTTCTCCCTTCAACAAACAGAATCTGTGCTCAAACCAGTTGAATCTTCAGATATGAAGATGACTCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 72 bp | TTCAACTTTGGTGAACAGCTGAGTCATCTTCATATCTaGAGATTCAACTGGTTTGAGCACAGATTCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FNFGEQLSHLHI*RFNWFEHRFCL Trigger: CAAACAGAATCTGTGCTCAAACCAGTTGAATCTTCAGATATGAAGATGACTCAGCTGTTCACCAAAGTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 72 bp | CAAAAAGGCAGCTTGTATCCTCTGATTCAACTTTGGTaGACAGCTGAGTCATCTTCATATCTGAAGATTCAA | + |
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Preference number: 6 (lower is better) Translates to: QKGSLYPLIQLW*TAESSSYLKIQ Trigger: TTGAATCTTCAGATATGAAGATGACTCAGCTGTTCACCAAAGTTGAATCAGAGGATACAAGCTGCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS CAA 72 bp | GCAAACAGTTTTTCCACCAGTTCCAACTTGAATACATaGACCATATCGCTATCCACATCAAAGCAATATTCA | + |
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Preference number: 6 (lower is better) Translates to: ANSFSTSSNLNT*TISLSTSKQYS Trigger: TGAATATTGCTTTGATGTGGATAGCGATATGGTCAATGTATTCAAGTTGGAACTGGTGGAAAAACTGTTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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| CDS TCA 72 bp | ATTACATCATTATATAATGGAACATCTTCAAGTTGTTaGTCTTCAGTTTCTGTGTCATCGCTGCCAAAATCC | + |
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Preference number: 6 (lower is better) Translates to: ITSLYNGTSSSC*SSVSVSSLPKS Trigger: GGATTTTGGCAGCGATGACACAGAAACTGAAGATCAACAACTTGAAGATGTTCCATTATATAATGATGTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021530.8 ENSMUST00000110461.8 |
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