Pregenerated sensors for HIC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043099Ensembl transcript IDs: ENSMUST00000055619.5, ENSMUST00000055619.6, ENSMUST00000131720.3
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCAACTGTGCCCAATGCTCCGACCCCAGCAGGGAGATTCACAGTaGGAATGGGTGTGGTCGCAAGGGCCGGAGGTAGGGCTGGGAGCG | + |
|
Preference number: 1 (lower is better) Translates to: LQLCPMLRPQQGDSQ*EWVWSQGPEVGLGA Trigger: CGCTCCCAGCCCTACCTCCGGCCCTTGCGACCACACCCATTCTCACTGTGAATCTCCCTGCTGGGGTCGGAGCATTGGGCACAGTTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR TCA 90 bp | GCATCCTTCCCCCAAGAGCAGCACGGAGCCGGGGGAGAGGGCCAATaGGCCACAGGGAGAGGCAGGGTTCTCCTTTGGTCAAAGCTGATA | + |
|
Preference number: 1 (lower is better) Translates to: ASFPQEQHGAGGEGQ*ATGRGRVLLWSKLI Trigger: TATCAGCTTTGACCAAAGGAGAACCCTGCCTCTCCCTGTGGCTCATTGGCCCTCTCCCCCGGCTCCGTGCTGCTCTTGGGGGAAGGATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR TCA 90 bp | AGGAAAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATaGGGAACTTCACATTATCAGTCCCGGGCTGGGCAGGAGCAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: RKGRVGPGASATCAK*GTSHYQSRAGQEQG Trigger: CCCCTGCTCCTGCCCAGCCCGGGACTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAAGAGCCTGTGTACAGAGTAGAGAATATACAAAGGGACAGAACGGGAACCAGGGTTGTCATCCCTaGCGCCAGAGCTGCCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: SGRACVQSREYTKGQNGNQGCHP*RQSCPP Trigger: GGGTGGGCAGCTCTGGCGCCAGGGATGACAACCCTG...GTTCCCGTTCTGTCCCTTTGTATATTCTCTACTCTGTACACAGGCTCTTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAAGAGCCTGTGTACAGAGTAGAGAATATACAAAGGGACAGAACGGGAACCGCCACTTGTGCAAAATaGGGAACTTCACATTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: LEEPVYRVENIQRDRTGTATCAK*GTSHYQ Trigger: CTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGC...GGTTCCCGTTCTGTCCCTTTGTATATTCTCTACTCTGTACACAGGCTCTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR TCA 72 bp | TGCCCAATGCTCCGACCCCAGCAGGGAGATTCACAGTaGGAATGGGTGTGGTCGCAAGGGCCGGAGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPMLRPQQGDSQ*EWVWSQGPEVG Trigger: CCCTACCTCCGGCCCTTGCGACCACACCCATTCTCACTGTGAATCTCCCTGCTGGGGTCGGAGCATTGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR CCA 72 bp | AGGAAGAGGAGGGGACACCTCGGAAGCAGAGACAGATaGGTCAGGGTTGTCATCCCTGGCGCCAGAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RKRRGHLGSRDR*VRVVIPGARAA Trigger: GGCAGCTCTGGCGCCAGGGATGACAACCCTGACCCATCTGTCTCTGCTTCCGAGGTGTCCCCTCCTCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR TCA 72 bp | CTTCCCCAGGCTAAGGCACTAAACAGTGAGGCCAGGTaGGGTGTAGAAAGGTGGGGCCACCACTGCGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPQAKALNSEAR*GVERWGHHCGA Trigger: AGCGCCGCAGTGGTGGCCCCACCTTTCTACACCTCACCTGGCCTCACTGTTTAGTGCCTTAGCCTGGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTCCGTCCGAATAATGGCATCCTTCCCCCAAGAGCAGCACGGAGCCGGGGGAGGCAGGGTTCTCCTTaGGTCAAAGCTGATATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SVRPNNGILPPRAARSRGRQGSP*VKADIK Trigger: TTTGATATCAGCTTTGACCAAAGGAGAACCCTGCCT...CCCCCGGCTCCGTGCTGCTCTTGGGGGAAGGATGCCATTATTCGGACGGACGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR TCA 72 bp | AGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATaGGGAACTTCACATTATCAGTCCCGGGCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVGPGASATCAK*GTSHYQSRAGQ Trigger: CTGCCCAGCCCGGGACTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| 3UTR CAA 72 bp | GGGGACACCTCGGAAGCAGAGACAGATGGGTCAGGGTaGTCATCCCTGGCGCCAGAGCTGCCCACCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDTSEAETDGSG*SSLAPELPTLV Trigger: CACCAGGGTGGGCAGCTCTGGCGCCAGGGATGACAACCCTGACCCATCTGTCTCTGCTTCCGAGGTGTCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055619.5 |
||
| CDS CCA 90 bp | GGCTGCATCGGGGCCCGACGGCGGCTCGGCGGCAGGCGGCGGCGGTaGCCCGGCCGGGGACGAGTAGCAAGCCTGGATGACGGGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCIGARRRLGGRRRR*PGRGRVASLDDGRG Trigger: GCCACGCCCGTCATCCAGGCTTGCTACTCGTCCCCGGCCGGGCCACCGCCGCCGCCTGCCGCCGAGCCGCCGTCGGGCCCCGATGCAGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 90 bp | CAGGCGGCGGCGGTGGCCCGGCCGGGGACGAGTAGCAAGCCTGGATaGCGGGCGTGGCAGCCCTCAAGCCCCGGCCGGGCCGCCCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QAAAVARPGTSSKPG*RAWQPSSPGRAARK Trigger: CTTACGGGCGGCCCGGCCGGGGCTTGAGGGCTGCCACGCCCGTCATCCAGGCTTGCTACTCGTCCCCGGCCGGGCCACCGCCGCCGCCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 90 bp | CTGCTGGGCCCGGGCCTGAAGCATATAGCTCAGCGCAGTGGGTGTTaGCGGCTGCATCGGGGCCCGACGGCGGCTCGGCGGCAGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLGPGLKHIAQRSGC*RLHRGPTAARRQAA Trigger: CGCCGCCTGCCGCCGAGCCGCCGTCGGGCCCCGATGCAGCCGTCAACACCCACTGCGCTGAGCTATATGCTTCAGGCCCGGGCCCAGCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | AGCCAGCACAGCGCCCAGGCTCGGCTCCGCGCCCGGGGCCACCGCTaGTGCTGCTGCGGCCTCAACACTGTCAGTCAGGCGGCCGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQHSAQARLRARGHR*CCCGLNTVSQAAGV Trigger: TACACCGGCCGCCTGACTGACAGTGTTGAGGCCGCAGCAGCAGCAGCGGTGGCCCCGGGCGCGGAGCCGAGCCTGGGCGCTGTGCTGGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | CAGCACAGCGCCCAGGCTCGGCTCCGCGCCCGGGGCCACCGCTGCTaGTGCTGCGGCCTCAACACTGTCAGTCAGGCGGCCGGTGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QHSAQARLRARGHRC*CCGLNTVSQAAGVD Trigger: ATCTACACCGGCCGCCTGACTGACAGTGTTGAGGCCGCAGCAGCAGCAGCGGTGGCCCCGGGCGCGGAGCCGAGCCTGGGCGCTGTGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | CACAGCGCCCAGGCTCGGCTCCGCGCCCGGGGCCACCGCTGCTGCTaGTGCGGCCTCAACACTGTCAGTCAGGCGGCCGGTGTAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: HSAQARLRARGHRCC*CGLNTVSQAAGVDE Trigger: TTCATCTACACCGGCCGCCTGACTGACAGTGTTGAGGCCGCAGCAGCAGCAGCGGTGGCCCCGGGCGCGGAGCCGAGCCTGGGCGCTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 90 bp | GGCGCTTCTTGCACAGAGCCACGAGGTCAGGGATCTGCAGGTAGCTaGCAGCAGCCAGCACAGCGCCCAGGCTCGGCTCCGCGCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GASCTEPRGQGSAGS*QQPAQRPGSAPRPG Trigger: CCCCGGGCGCGGAGCCGAGCCTGGGCGCTGTGCTGGCTGCTGCCAGCTACCTGCAGATCCCTGACCTCGTGGCTCTGTGCAAGAAGCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 90 bp | CTCCTCGCTGCTGCTCTTATAGTCGTCGCCGTCTGCTCCTGTGCCTaGCCCGTCCAGGCTCCCGGGGTAGCGTGGCGGGGGTACCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLAAALIVVAVCSCA*PVQAPGVAWRGYQA Trigger: GGCCTGGTACCCCCGCCACGCTACCCCGGGAGCCTGGACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCGAGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | CGGTCTCCTCGCTGCTGCTCTTATAGTCGTCGCCGTCTGCTCCTGTaGCTGGCCCGTCCAGGCTCCCGGGGTAGCGTGGCGGGGGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPRCCSYSRRRLLL*LARPGSRGSVAGVP Trigger: TGGTACCCCCGCCACGCTACCCCGGGAGCCTGGACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCGAGGAGACCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | GCTGCTACCGGTCTCCTCGCTGCTGCTCTTATAGTCGTCGCCGTCTaGTCCTGTGCCTGGCCCGTCCAGGCTCCCGGGGTAGCGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AATGLLAAALIVVAV*SCAWPVQAPGVAWR Trigger: CCGCCACGCTACCCCGGGAGCCTGGACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCGAGGAGACCGGTAGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | GGCCGCCGGGTGGGCTGGGGTCTTCGCTGCTACCGGTCTCCTCGCTaGTGCTCTTATAGTCGTCGCCGTCTGCTCCTGTGCCTGGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRRVGWGLRCYRSPR*CSYSRRRLLLCLAR Trigger: ACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAAGACCCCAGCCCACCCGGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | CGCCGGGTGGGCTGGGGTCTTCGCTGCTACCGGTCTCCTCGCTGCTaGTCTTATAGTCGTCGCCGTCTGCTCCTGTGCCTGGCCCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRVGWGLRCYRSPRC*SYSRRRLLLCLARP Trigger: TGGACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAAGACCCCAGCCCACCCGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 90 bp | GGTAGAGGCTCTCCAGCGCCACCTTGGGGTCGTGCAGGAAGTGCGTaGTCTGCGCCAGCAGCTCGGCAGCAGCTGCCTTGTCCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRGSPAPPWGRAGSA*SAPAARQQLPCPAA Trigger: AGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGAGCCTCTACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 90 bp | CGGTCGATGGTTCGGCTGTCCGGTCCTGCGGCCAAGTGCGCACCCTaGCTCAGCACCTCTGCCGCCTTGTCTGGGCTGAGTCCTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSMVRLSGPAAKCAP*LSTSAALSGLSPSS Trigger: TGAGCTAGGACTCAGCCCAGACAAGGCGGCAGAGGTGCTGAGCCAGGGTGCGCACTTGGCCGCAGGACCGGACAGCCGAACCATCGACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 90 bp | CGCCGCTGCCTCCTCCCCGCAGGTGGCAGTACTTGCCGTGGCGTTTaGGGCGCTTCTTGCACAGAGCCACGAGGTCAGGGATCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRCLLPAGGSTCRGV*GASCTEPRGQGSAG Trigger: ACCTGCAGATCCCTGACCTCGTGGCTCTGTGCAAGAAGCGCCTCAAACGCCACGGCAAGTACTGCCACCTGCGGGGAGGAGGCAGCGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | AGGCTCTCCAGCGCCACCTTGGGGTCGTGCAGGAAGTGCGTGGTCTaGGCCAGCAGCTCGGCAGCAGCTGCCTTGTCCTGCTGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSSATLGSCRKCVV*ASSSAAAALSCCFR Trigger: TCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | GGAGAGAAACGGTCGATGGTTCGGCTGTCCGGTCCTGCGGCCAAGTaGGCACCCTGGCTCAGCACCTCTGCCGCCTTGTCTGGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GEKRSMVRLSGPAAK*APWLSTSAALSGLS Trigger: ACTCAGCCCAGACAAGGCGGCAGAGGTGCTGAGCCAGGGTGCGCACTTGGCCGCAGGACCGGACAGCCGAACCATCGACCGTTTCTCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 90 bp | CTTCCTCGAAACGGGTCTGGAGTCGGTACGGCCTCCTCCAGCTTTTaGAAGGGCAAAGGCGGCAGCGGGGGCAGGGCGAGTGATGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPRNGSGVGTASSSF*KGKGGSGGRASDGS Trigger: GGAGCCATCACTCGCCCTGCCCCCGCTGCCGCCTTTGCCCTTCCAAAAGCTGGAGGAGGCCGTACCGACTCCAGACCCGTTTCGAGGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 90 bp | GGAGCCTCGATCCCGGACCAGTTCATCGCCATAACTACCCAGGCCTaGCTCGTGCTTCATCCAGCGGTAGAGGAGGCTGGAGCCGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GASIPDQFIAITTQA*LVLHPAVEEAGAVG Trigger: CCCGACGGCTCCAGCCTCCTCTACCGCTGGATGAAGCACGAGCCAGGCCTGGGTAGTTATGGCGATGAACTGGTCCGGGATCGAGGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 90 bp | CTGCTGCTGCGGCCTCAACACTGTCAGTCAGGCGGCCGGTGTAGATaGAGTCCAGCACCAGGCGGAACACGGCCGGGCTCACCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLRPQHCQSGGRCR*SPAPGGTRPGSPCH Trigger: ATGACATGGTGAGCCCGGCCGTGTTCCGCCTGGTGCTGGACTTCATCTACACCGGCCGCCTGACTGACAGTGTTGAGGCCGCAGCAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | TGCGTGGTCTGCGCCAGCAGCTCGGCAGCAGCTGCCTTGTCCTGCTaGTTCAGACTCAGCTGTTCAGCTGTGAGGCGGGCCACAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CVVCASSSAAAALSC*FRLSCSAVRRATAK Trigger: CTTTGCTGTGGCCCGCCTCACAGCTGAACAGCTGAGTCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | AAGTGCGTGGTCTGCGCCAGCAGCTCGGCAGCAGCTGCCTTGTCCTaGTGCTTCAGACTCAGCTGTTCAGCTGTGAGGCGGGCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KCVVCASSSAAAALS*CFRLSCSAVRRATA Trigger: TGCTGTGGCCCGCCTCACAGCTGAACAGCTGAGTCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 90 bp | GTCGTGCAGGAAGTGCGTGGTCTGCGCCAGCAGCTCGGCAGCAGCTaGCTTGTCCTGCTGCTTCAGACTCAGCTGTTCAGCTGTGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VVQEVRGLRQQLGSS*LVLLLQTQLFSCEA Trigger: CGCCTCACAGCTGAACAGCTGAGTCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 90 bp | GGCCCAAGTGGCTGCGCATATGGCGTGTCATGGTTCCGCGTTGCGTaGACTTCTTTCCGCAGATGGTACACGGATAGGGCCTTGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPSGCAYGVSWFRVA*TSFRRWYTDRALSA Trigger: GGCTGACAAGGCCCTATCCGTGTACCATCTGCGGAAAGAAGTTCACGCAACGCGGAACCATGACACGCCATATGCGCAGCCACTTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 90 bp | CTTCCTCTACGTGAGCCTCCACGTGTGCATTCAGCTGTTCCGAGCTaGGGAAGCCTTTGCCACATGGGATGCACACGTACAGGTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPLREPPRVHSAVPS*GSLCHMGCTRTGCH Trigger: GTGACAACCTGTACGTGTGCATCCCATGTGGCAAAGGCTTCCCCAGCTCGGAACAGCTGAATGCACACGTGGAGGCTCACGTAGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | GCCCAGGCTCGGCTCCGCGCCCGGGGCCACCGCTGCTaGTGCTGCGGCCTCAACACTGTCAGTCAGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQARLRARGHRC*CCGLNTVSQAA Trigger: GGCCGCCTGACTGACAGTGTTGAGGCCGCAGCAGCAGCAGCGGTGGCCCCGGGCGCGGAGCCGAGCCTGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | CAGGCTCGGCTCCGCGCCCGGGGCCACCGCTGCTGCTaGTGCGGCCTCAACACTGTCAGTCAGGCGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QARLRARGHRCC*CGLNTVSQAAG Trigger: ACCGGCCGCCTGACTGACAGTGTTGAGGCCGCAGCAGCAGCAGCGGTGGCCCCGGGCGCGGAGCCGAGCCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | AGCGCCCAGGCTCGGCTCCGCGCCCGGGGCCACCGCTaGTGCTGCTGCGGCCTCAACACTGTCAGTCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SAQARLRARGHR*CCCGLNTVSQA Trigger: CGCCTGACTGACAGTGTTGAGGCCGCAGCAGCAGCAGCGGTGGCCCCGGGCGCGGAGCCGAGCCTGGGCGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 90 bp | GCTGCTGGGCCCGGGCCTGAAGCATATAGCTCAGCGCAGTGGGTGTaGACGGCTGCATCGGGGCCCGACGGCGGCTCGGCGGCAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAGPGPEAYSSAQWV*TAASGPDGGSAAGG Trigger: GCCGCCTGCCGCCGAGCCGCCGTCGGGCCCCGATGCAGCCGTCAACACCCACTGCGCTGAGCTATATGCTTCAGGCCCGGGCCCAGCAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 72 bp | TTGGAAGGGCAAAGGCGGCAGCGGGGGCAGGGCGAGTaGTGGCTCCTTGTAGACTGCGGGCCCCGCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LEGQRRQRGQGE*WLLVDCGPRTG Trigger: CCCGGTGCGGGGCCCGCAGTCTACAAGGAGCCATCACTCGCCCTGCCCCCGCTGCCGCCTTTGCCCTTCCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | GCTGGGCCCGGGCCTGAAGCATATAGCTCAGCGCAGTaGGTGTTGACGGCTGCATCGGGGCCCGACGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPGPEAYSSAQ*VLTAASGPDGG Trigger: GCCGCCGTCGGGCCCCGATGCAGCCGTCAACACCCACTGCGCTGAGCTATATGCTTCAGGCCCGGGCCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | GCTGCTCTTATAGTCGTCGCCGTCTGCTCCTGTGCCTaGCCCGTCCAGGCTCCCGGGGTAGCGTGGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AALIVVAVCSCA*PVQAPGVAWRG Trigger: CCCCCGCCACGCTACCCCGGGAGCCTGGACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | CGCTGCTGCTCTTATAGTCGTCGCCGTCTGCTCCTGTaGCTGGCCCGTCCAGGCTCCCGGGGTAGCGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RCCSYSRRRLLL*LARPGSRGSVA Trigger: CGCCACGCTACCCCGGGAGCCTGGACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | AGGCTCTCCAGCGCCACCTTGGGGTCGTGCAGGAAGTaGGTGGTCTGCGCCAGCAGCTCGGCAGCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSSATLGSCRK*VVCASSSAAAA Trigger: GGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 90 bp | TCACTAAGCGGTCGCTCGGGGACCGAGGAACCTGGCGGGCTCTTCTaGGACAGATCCAGGCCGCAAAGCGGGGAGCAGCGACGCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSGRSGTEEPGGLF*DRSRPQSGEQRRSG Trigger: CCCGGAGCGTCGCTGCTCCCCGCTTTGCGGCCTGGATCTGTCCAAGAAGAGCCCGCCAGGTTCCTCGGTCCCCGAGCGACCGCTTAGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | AGCGCCACCTTGGGGTCGTGCAGGAAGTGCGTGGTCTaGGCCAGCAGCTCGGCAGCAGCTGCCTTGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SATLGSCRKCVV*ASSSAAAALSC Trigger: GCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | GTCGCTCGGGGACCGAGGAACCTGGCGGGCTCTTCTTaGACAGATCCAGGCCGCAAAGCGGGGAGCAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: VARGPRNLAGSS*TDPGRKAGSSD Trigger: GTCGCTGCTCCCCGCTTTGCGGCCTGGATCTGTCCAAGAAGAGCCCGCCAGGTTCCTCGGTCCCCGAGCGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 72 bp | GGTCGCTCGGGGACCGAGGAACCTGGCGGGCTCTTCTaGGACAGATCCAGGCCGCAAAGCGGGGAGCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: GRSGTEEPGGLF*DRSRPQSGEQR Trigger: TCGCTGCTCCCCGCTTTGCGGCCTGGATCTGTCCAAGAAGAGCCCGCCAGGTTCCTCGGTCCCCGAGCGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 90 bp | CCGCCGCTGCCTCCTCCCCGCAGGTGGCAGTACTTGCCGTGGCGTTaGAGGCGCTTCTTGCACAGAGCCACGAGGTCAGGGATCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPLPPPRRWQYLPWR*RRFLHRATRSGICR Trigger: CCTGCAGATCCCTGACCTCGTGGCTCTGTGCAAGAAGCGCCTCAAACGCCACGGCAAGTACTGCCACCTGCGGGGAGGAGGCAGCGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | GGTCTCCTCGCTGCTGCTCTTATAGTCGTCGCCGTCTaGTCCTGTGCCTGGCCCGTCCAGGCTCCCGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GLLAAALIVVAV*SCAWPVQAPGV Trigger: TACCCCGGGAGCCTGGACGGGCCAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCGAGGAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | AACGGGTCTGGAGTCGGTACGGCCTCCTCCAGCTTTTaGAAGGGCAAAGGCGGCAGCGGGGGCAGGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: NGSGVGTASSSF*KGKGGSGGRAS Trigger: ACTCGCCCTGCCCCCGCTGCCGCCTTTGCCCTTCCAAAAGCTGGAGGAGGCCGTACCGACTCCAGACCCGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | TCTCCAGCGCCACCTTGGGGTCGTGCAGGAAGTGCGTaGTCTGCGCCAGCAGCTCGGCAGCAGCTGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPAPPWGRAGSA*SAPAARQQLPC Trigger: ACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 72 bp | AAACGGGTCTGGAGTCGGTACGGCCTCCTCCAGCTTTaGGAAGGGCAAAGGCGGCAGCGGGGGCAGGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: KRVWSRYGLLQL*EGQRRQRGQGE Trigger: CTCGCCCTGCCCCCGCTGCCGCCTTTGCCCTTCCAAAAGCTGGAGGAGGCCGTACCGACTCCAGACCCGTTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 72 bp | CGGCCTCAACACTGTCAGTCAGGCGGCCGGTGTAGATaGAGTCCAGCACCAGGCGGAACACGGCCGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPQHCQSGGRCR*SPAPGGTRPGS Trigger: TGAGCCCGGCCGTGTTCCGCCTGGTGCTGGACTTCATCTACACCGGCCGCCTGACTGACAGTGTTGAGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | GGGCCACAGCAAAGACACCCTCAGGGAAGTCGAGCTTaGCCTTGCCGTCAGGGCCAGGGACGCCAGGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GPQQRHPQGSRA*PCRQGQGRQVV Trigger: GACTACCTGGCGTCCCTGGCCCTGACGGCAAGGGCAAGCTCGACTTCCCTGAGGGTGTCTTTGCTGTGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | GGGTCCCGGACTGCCACCGCTTCCTCGAAACGGGTCTaGAGTCGGTACGGCCTCCTCCAGCTTTTGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRTATASSKRV*SRYGLLQLLEG Trigger: CCCTTCCAAAAGCTGGAGGAGGCCGTACCGACTCCAGACCCGTTTCGAGGAAGCGGTGGCAGTCCGGGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 72 bp | CCTCCTCCCCGCAGGTGGCAGTACTTGCCGTGGCGTTaGAGGCGCTTCTTGCACAGAGCCACGAGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPRRWQYLPWR*RRFLHRATRSG Trigger: CCCTGACCTCGTGGCTCTGTGCAAGAAGCGCCTCAAACGCCACGGCAAGTACTGCCACCTGCGGGGAGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 72 bp | CGGGCCACAGCAAAGACACCCTCAGGGAAGTCGAGCTaGCCCTTGCCGTCAGGGCCAGGGACGCCAGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RATAKTPSGKSS*PLPSGPGTPGS Trigger: ACTACCTGGCGTCCCTGGCCCTGACGGCAAGGGCAAGCTCGACTTCCCTGAGGGTGTCTTTGCTGTGGCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 90 bp | TGCAGGAAGTGCGTGGTCTGCGCCAGCAGCTCGGCAGCAGCTGCCTaGTCCTGCTGCTTCAGACTCAGCTGTTCAGCTGTGAGGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CRKCVVCASSSAAAA*SCCFRLSCSAVRRA Trigger: GGCCCGCCTCACAGCTGAACAGCTGAGTCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 90 bp | GGTCCTGCGGCCAAGTGCGCACCCTGGCTCAGCACCTCTGCCGCCTaGTCTGGGCTGAGTCCTAGCTCAGCAGTGAATTTAGCCAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPAAKCAPWLSTSAA*SGLSPSSAVNLASG Trigger: CCCGCTGGCTAAATTCACTGCTGAGCTAGGACTCAGCCCAGACAAGGCGGCAGAGGTGCTGAGCCAGGGTGCGCACTTGGCCGCAGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 72 bp | CTCCTCCCCGCAGGTGGCAGTACTTGCCGTGGCGTTTaGGGCGCTTCTTGCACAGAGCCACGAGGTCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLPAGGSTCRGV*GASCTEPRGQG Trigger: TCCCTGACCTCGTGGCTCTGTGCAAGAAGCGCCTCAAACGCCACGGCAAGTACTGCCACCTGCGGGGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | GGCTGGGGTCTTCGCTGCTACCGGTCTCCTCGCTGCTaGTCTTATAGTCGTCGCCGTCTGCTCCTGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GWGLRCYRSPRC*SYSRRRLLLCL Trigger: CAGGCACAGGAGCAGACGGCGACGACTATAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAAGACCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | GTCTGCGCCAGCAGCTCGGCAGCAGCTGCCTTGTCCTaGTGCTTCAGACTCAGCTGTTCAGCTGTGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VCASSSAAAALS*CFRLSCSAVRR Trigger: CCGCCTCACAGCTGAACAGCTGAGTCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | GAAGTGCGTGGTCTGCGCCAGCAGCTCGGCAGCAGCTaGCTTGTCCTGCTGCTTCAGACTCAGCTGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EVRGLRQQLGSS*LVLLLQTQLFS Trigger: GCTGAACAGCTGAGTCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCACTTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 72 bp | TGCGTGGTCTGCGCCAGCAGCTCGGCAGCAGCTGCCTaGTCCTGCTGCTTCAGACTCAGCTGTTCAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CVVCASSSAAAA*SCCFRLSCSAV Trigger: CACAGCTGAACAGCTGAGTCTGAAGCAGCAGGACAAGGCAGCTGCTGCCGAGCTGCTGGCGCAGACCACGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | AGCACCAGGCGGAACACGGCCGGGCTCACCATGTCATaGTCCAGGTTTAGCAGGTTGTCATGCACCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STRRNTAGLTMS*SRFSRLSCTTR Trigger: CCTGGTGGTGCATGACAACCTGCTAAACCTGGACCATGACATGGTGAGCCCGGCCGTGTTCCGCCTGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | ATCCCGGACCAGTTCATCGCCATAACTACCCAGGCCTaGCTCGTGCTTCATCCAGCGGTAGAGGAGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: IPDQFIAITTQA*LVLHPAVEEAG Trigger: TCCAGCCTCCTCTACCGCTGGATGAAGCACGAGCCAGGCCTGGGTAGTTATGGCGATGAACTGGTCCGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CAA 72 bp | GCCAAGTGCGCACCCTGGCTCAGCACCTCTGCCGCCTaGTCTGGGCTGAGTCCTAGCTCAGCAGTGAATTTA | + |
|
Preference number: 6 (lower is better) Translates to: AKCAPWLSTSAA*SGLSPSSAVNL Trigger: TAAATTCACTGCTGAGCTAGGACTCAGCCCAGACAAGGCGGCAGAGGTGCTGAGCCAGGGTGCGCACTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 72 bp | GGCTGCGCATATGGCGTGTCATGGTTCCGCGTTGCGTaGACTTCTTTCCGCAGATGGTACACGGATAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCAYGVSWFRVA*TSFRRWYTDRA Trigger: GGCCCTATCCGTGTACCATCTGCGGAAAGAAGTTCACGCAACGCGGAACCATGACACGCCATATGCGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS CCA 72 bp | CGTGAGCCTCCACGTGTGCATTCAGCTGTTCCGAGCTaGGGAAGCCTTTGCCACATGGGATGCACACGTACA | + |
|
Preference number: 6 (lower is better) Translates to: REPPRVHSAVPS*GSLCHMGCTRT Trigger: TGTACGTGTGCATCCCATGTGGCAAAGGCTTCCCCAGCTCGGAACAGCTGAATGCACACGTGGAGGCTCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS TCA 72 bp | TCTGCCCTGCCATATAACGCCTCTTCTTCCTCTACGTaGGCCTCCACGTGTGCATTCAGCTGTTCCGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SALPYNASSSST*ASTCAFSCSEL Trigger: CAGCTCGGAACAGCTGAATGCACACGTGGAGGCTCACGTAGAGGAAGAAGAGGCGTTATATGGCAGGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055619.6 ENSMUST00000131720.3 |
||
| CDS GCA 72 bp | GAATGGCCAGGCGCCTCCATCGTGTCCAGCATCGTCTaGCCAGCACACTCTCCCGATTTAAGTAAAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EWPGASIVSSIV*PAHSPDLSKMS Trigger: GGACATTTTACTTAAATCGGGAGAGTGTGCTGGGCAGACGATGCTGGACACGATGGAGGCGCCTGGCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131720.3 |
||