Pregenerated sensors for HIBCH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041426Ensembl transcript IDs: ENSMUST00000044478.7, ENSMUST00000159352.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAACAAACCATTTCTGATGAAGACTGGAGTAGAAACTTAGACCCTTaGGGTGCTGTGGGTCAAAGTCTGTGCCATGGCCACTCCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: QQTISDEDWSRNLDP*GAVGQSLCHGHSKQ Trigger: CTGCTTGGAGTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAGGGTCTAAGTTTCTACTCCAGTCTTCATCAGAAATGGTTTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR GCA 90 bp | TCAAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGAGAAGCTCTaGTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCT | + |
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Preference number: 1 (lower is better) Translates to: SKSVPWPLQAAIEKL*YAAGRFHKTLVYGS Trigger: AGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCTCAAAGTCTGTGCCATaGCCACTCCAAGCAGCCATA | + |
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Preference number: 2 (lower is better) Translates to: KVCAMATPSSHREALLRCSKSVP*PLQAAI Trigger: TATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGA...GCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGCTTGTAGGCTGCATGAAAATGGGCCTAGCCTCTGTGCTATGATGTGTTGTGCTATGATGTGTTaGCCTTTGCTCCAAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: FPACRLHENGPSLCAMMCCAMMC*PLLQNK Trigger: TTTATTTTGGAGCAAAGGTCAACACATCATAGCACA...ACACATCATAGCACAGAGGCTAGGCCCATTTTCATGCAGCCTACAAGCTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCTCAGCTGAGTTACAAACATTGGTaGTTAAACTTTGGGCAACCA | + |
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Preference number: 2 (lower is better) Translates to: LCYAAGRFHKTLVYGSQLSYKHW*LNFGQP Trigger: TGGTTGCCCAAAGTTTAAGCACCAATGTTTGTAACT...CAGCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR-3UTR TCA 90 bp | TATAAGGCATCAACACACCCCCTCCAAATTTCAGGGTCTTTATTTTTGCTAACTTGTGCTATGATGTGTTaGCCTTTGCTCCAAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: YKASTHPLQISGSLFLLTCAMMC*PLLQNK Trigger: TTTATTTTGGAGCAAAGGTCAACACATCATAGCACA...AGTTAGCAAAAATAAAGACCCTGAAATTTGGAGGGGGTGTGTTGATGCCTTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTATAAGGCATCAACACACCCCCTCCAAATTTCAGGGTCTTTATTTTTGCTAAGTTACAAACATTGGTaGTTAAACTTTGGGCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: IYKASTHPLQISGSLFLLSYKHW*LNFGQP Trigger: TGGTTGCCCAAAGTTTAAGCACCAATGTTTGTAACT...TAGCAAAAATAAAGACCCTGAAATTTGGAGGGGGTGTGTTGATGCCTTATAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR CCA 72 bp | AGACCCTTGAGGTGCTGTGGGTCAAAGTCTGTGCCATaGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: RPLRCCGSKSVP*PLQAAIEKLCY Trigger: GTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR GCA 72 bp | GTGCCATGGCCACTCCAAGCAGCCATAGAGAAGCTCTaGTACGCTGCAGGAAGGTTCCATAAAACATTGGTG | + |
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Preference number: 3 (lower is better) Translates to: VPWPLQAAIEKL*YAAGRFHKTLV Trigger: CACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR TCA 72 bp | ATTTCTGATGAAGACTGGAGTAGAAACTTAGACCCTTaGGGTGCTGTGGGTCAAAGTCTGTGCCATGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ISDEDWSRNLDP*GAVGQSLCHGH Trigger: GTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAGGGTCTAAGTTTCTACTCCAGTCTTCATCAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR CCA 72 bp | GATCTCAGCTGTCATATCATGAAAAGTTACAAACATTaGTGCTTAAACTTTGGGCAACCACTGTATCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: DLSCHIMKSYKH*CLNFGQPLYHE Trigger: TTCATGATACAGTGGTTGCCCAAAGTTTAAGCACCAATGTTTGTAACTTTTCATGATATGACAGCTGAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | AAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCGCTCTAACACCTTCATaGAAGTCATGCCCTTCCATA | + |
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Preference number: 4 (lower is better) Translates to: KVCAMATPSSHREALLRCALTPS*KSCPSI Trigger: TATGGAAGGGCATGACTTTCATGAAGGTGTTAGAGC...GCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS-3UTR GCA 90 bp | CTTGAGGTGCTGTGGGTCAAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGATCTGCAGCTTCTGTGTaGATGGACATTCTCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: LEVLWVKVCAMATPSSHRSAASV*MDILRC Trigger: ACATCTGAGAATGTCCATGCACACAGAAGCTGCAGA...TCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | CTTGAGGTGCTGTGGGTCAAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGATCCTATTCCCGTTTCTaGCATAGCAAAGAGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: LEVLWVKVCAMATPSSHRSYSRF*HSKERP Trigger: AGGTCTCTCTTTGCTATGCCAGAAACGGGAATAGGA...TCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | CCCTTGAGGTGCTGTGGGTCAAAGTCTGTGCCATGGCCACTCCAAGCAGCCATACCTTCATCTGTTCTATaGCAAAAGGTGACCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLRCCGSKSVPWPLQAAIPSSVL*QKVTHL Trigger: AAGATGGGTCACCTTTTGCCATAGAACAGATGAAGG...TATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS-3UTR GCA 90 bp | AAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCGACATTCTCAGATGTTaGAGAATAACGCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVCAMATPSSHREALLRCDILRC*RITLAL Trigger: AAGAGCCAGCGTTATTCTGCAACATCTGAGAATGTC...GCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | AGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCTCAGCCTCCAGCAGCACTTCTaGAGCTTCTGTGTGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSATLQEGSIKHWCMDLSLQQHF*SFCVHG Trigger: TCCATGCACACAGAAGCTGCAGAAGTGCTGCTGGAG...GCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | CCCTTGAGGTGCTGTGGGTCAAAGTCTGTGCCATGGCCACTCCAAGCAGCCATATCTGGTCTTTGTCAATaGGAACTTCATCTGTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: PLRCCGSKSVPWPLQAAISGLCQ*ELHLFY Trigger: ATAGAACAGATGAAGTTCTCATTGACAAAGACCAGA...TATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | GCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGGCAATTCCCGCTCTGTaGACATCTCTTCCCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAIEKLCYAAGRFHKTLVAIPAL*TSLPFS Trigger: ACTAAAGGGAAGAGATGTGCACAGAGCGGGAATTGC...CACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | AAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCATGCCCTTCCATACATaGTTGAGTTATCCGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: KVCAMATPSSHREALLRCMPFHT*LSYPIF Trigger: GAATATCGGATAACTCAAGCATGTATGGAAGGGCAT...GCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS-3UTR CCA 90 bp | TGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATTGTCTTGATCCATCTTaGACTTGGCATGATAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPLQAAIEKLCYAAGRFHCLDPS*TWHDSF Trigger: AAAGCTATCATGCCAAGTCCAAGATGGATCAAGACA...ATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | CAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGCTCTTGCAAAGTCTTTaGAGAGCCCTCCATGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QAAIEKLCYAAGRFHKTLLLQSL*RALHEL Trigger: CAACTCATGGAGGGCTCTTCAAAGACTTTGCAAGAG...CAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS-3UTR GCA 90 bp | CTTGAGGTGCTGTGGGTCAAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGAAAAGGTGACCCATCTTaGCGTAAGTTTTCAATTATC | + |
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Preference number: 4 (lower is better) Translates to: LEVLWVKVCAMATPSSHRKGDPS*RKFSII Trigger: GATAATTGAAAACTTACGGCAAGATGGGTCACCTTT...TCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGACCCACAGCACCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | TGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATTCTGTTCCACGGTATTaGCTGAAAAACAACTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: WPLQAAIEKLCYAAGRFHSVPRY*LKNNCL Trigger: TAAACAGTTGTTTTTCAGCCAATACCGTGGAACAGA...ATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCTCAGCTGTCTGCAGCTTCTGTGTaGATGGACATTCTCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: LCYAAGRFHKTLVYGSQLSAASV*MDILRC Trigger: ACATCTGAGAATGTCCATGCACACAGAAGCTGCAGA...CAGCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | GAAAACCATTTCCAGCTTGTAGGCTGCATGAAAATGGGCCTAGCCTCTGTGCTACATATTCAGACTCAGTaGGTTGAGGAACTTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ENHFQLVGCMKMGLASVLHIQTQ*VEELGS Trigger: AGACCCAAGTTCCTCAACGCACTGAGTCTGAATATG...TAGCACAGAGGCTAGGCCCATTTTCATGCAGCCTACAAGCTGGAAATGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGCAGCTTCTGTGTGCATaGACATTCTCAGATGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: QAAIEKLCYAAGRFHKTLQLLCA*TFSDVA Trigger: TGCAACATCTGAGAATGTCCATGCACACAGAAGCTG...CAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | TGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATAATAAGGGCAACATATaGTTTCTGACAAGATGCAAT | + |
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Preference number: 4 (lower is better) Translates to: WPLQAAIEKLCYAAGRFHNKGNI*FLTRCN Trigger: ATTGCATCTTGTCAGAAACCATATGTTGCCCTTATT...ATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | GAAAACCATTTCCAGCTTGTAGGCTGCATGAAAATGGGCCTAGCCTCTGTGCTAGACATTCTCAGATGTTaGAGAATAACGCTGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ENHFQLVGCMKMGLASVLDILRC*RITLAL Trigger: AAGAGCCAGCGTTATTCTGCAACATCTGAGAATGTC...TAGCACAGAGGCTAGGCCCATTTTCATGCAGCCTACAAGCTGGAAATGGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | CAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGTCTGTATCCTGTCAGTaGAAGGAAGTAACCGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QAAIEKLCYAAGRFHKTLSVSCQ*KEVTEF Trigger: AAACTCGGTTACTTCCTTGCACTGACAGGATACAGA...CAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGATCCATCTTGGACTTaGCATGATAGCTTTCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: QAAIEKLCYAAGRFHKTLDPSWT*HDSFLR Trigger: TCTTAGAAAGCTATCATGCCAAGTCCAAGATGGATC...CAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | TTTCCAGCTTGTAGGCTGCATGAAAATGGGCCTAGCCTCTGTGCTATGATGTGTACTTCATCTGTTCTATaGCAAAAGGTGACCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: FPACRLHENGPSLCAMMCTSSVL*QKVTHL Trigger: AAGATGGGTCACCTTTTGCCATAGAACAGATGAAGT...ACACATCATAGCACAGAGGCTAGGCCCATTTTCATGCAGCCTACAAGCTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | CTTCCCAATCATTTAAAAATGAGAAAACCATTTCCAGCTTGTAGGCTGCATGAAGAATTGACCATGGACTaGAAGACCAACTCCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LPNHLKMRKPFPACRLHEELTMD*KTNSPT Trigger: GGTGGGGGAGTTGGTCTTTCAGTCCATGGTCAATTC...TTCATGCAGCCTACAAGCTGGAAATGGTTTTCTCATTTTTAAATGATTGGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | CTGGAGCTCTTGAGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGGTAGCCACTCGGAATTaGCCATGGACTGAAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: LELLRISYKPGTNKPFLMVATRN*PWTERP Trigger: TGGTCTTTCAGTCCATGGTCAATTCCGAGTGGCTAC...CATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCTCAAGAGCTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | GCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTGGTTTCTGACAAGATaGAATTGCATTGTTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: AAIEKLCYAAGRFHKTLVWFLTR*NCIVQD Trigger: ATCTTGAACAATGCAATTGCATCTTGTCAGAAACCA...CACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | TTTCCAGCTTGTAGGCTGCATGAAAATGGGCCTAGCCTCTGTGCTATGATGTGTTCTGTTCCACGGTATTaGCTGAAAAACAACTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: FPACRLHENGPSLCAMMCSVPRY*LKNNCL Trigger: TAAACAGTTGTTTTTCAGCCAATACCGTGGAACAGA...ACACATCATAGCACAGAGGCTAGGCCCATTTTCATGCAGCCTACAAGCTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| 3UTR CAA 72 bp | AAGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATaGGTGTATGGATCTCAGCTGTCATATCATGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: KLCYAAGRFHKT*VYGSQLSYHEK Trigger: CTTTTCATGATATGACAGCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | CTCTTGAGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGAAGACTGAATTGACCATGGACTaGAAGACCAACTCCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LLRISYKPGTNKPFLMKTELTMD*KTNSPT Trigger: GGTGGGGGAGTTGGTCTTTCAGTCCATGGTCAATTC...AGTCTTCATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCTCAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | AACATTTATAAGGCATCAACACACCCCCTCCAAATTTCAGGGTCTTTATTTTTGGTAGCCACTCGGAATTaGCCATGGACTGAAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: NIYKASTHPLQISGSLFLVATRN*PWTERP Trigger: TGGTCTTTCAGTCCATGGTCAATTCCGAGTGGCTAC...CAAAAATAAAGACCCTGAAATTTGGAGGGGGTGTGTTGATGCCTTATAAATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | TTTCCAGCTTGTAGGCTGCATGAAAATGGGCCTAGCCTCTGTGCTATGATGTGTCTGACAAGATGCAATTaGATTGTTCAAGATGTATTC | + |
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Preference number: 4 (lower is better) Translates to: FPACRLHENGPSLCAMMCLTRCN*IVQDVF Trigger: GAATACATCTTGAACAATGCAATTGCATCTTGTCAG...ACACATCATAGCACAGAGGCTAGGCCCATTTTCATGCAGCCTACAAGCTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGCTCTTGAGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGGCAATTCCCGCTCTGTaGACATCTCTTCCCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LELLRISYKPGTNKPFLMAIPAL*TSLPFS Trigger: ACTAAAGGGAAGAGATGTGCACAGAGCGGGAATTGC...CATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCTCAAGAGCTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCTCAGCAATAAGGGCAACATATaGTTTCTGACAAGATGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SSATLQEGSIKHWCMDLSNKGNI*FLTRCN Trigger: ATTGCATCTTGTCAGAAACCATATGTTGCCCTTATT...GCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGCTCTTGAGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGCATATTCAGACTCAGTaGGTTGAGGAACTTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LELLRISYKPGTNKPFLMHIQTQ*VEELGS Trigger: AGACCCAAGTTCCTCAACGCACTGAGTCTGAATATG...CATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCTCAAGAGCTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | CATTGGTGTATGGATCTCAGCTGTCATATCATGAAAAGTTACAAACATTGGTGCATGATCAGTACCTCTTaGAAAGTCTTTGAAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: HWCMDLSCHIMKSYKHWCMISTS*KVFEEP Trigger: GGGCTCTTCAAAGACTTTGCAAGAGGTACTGATCAT...GCACCAATGTTTGTAACTTTTCATGATATGACAGCTGAGATCCATACACCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS-3UTR CCA 90 bp | ATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGAAGACTGGAGTAGAACAGCTTCTGTGTGCATaGACATTCTCAGATGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: ISYKPGTNKPFLMKTGVEQLLCA*TFSDVA Trigger: TGCAACATCTGAGAATGTCCATGCACACAGAAGCTG...TTCTACTCCAGTCTTCATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | AGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGAAGACTGGAGTATCTGTATCCTGTCAGTaGAAGGAAGTAACCGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: RISYKPGTNKPFLMKTGVSVSCQ*KEVTEF Trigger: AAACTCGGTTACTTCCTTGCACTGACAGGATACAGA...TACTCCAGTCTTCATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | ATTTATAAGGCATCAACACACCCCCTCCAAATTTCAGGGTCTTTATTTTTGCTATGTCTTGATCCATCTTaGACTTGGCATGATAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IYKASTHPLQISGSLFLLCLDPS*TWHDSF Trigger: AAAGCTATCATGCCAAGTCCAAGATGGATCAAGACA...TAGCAAAAATAAAGACCCTGAAATTTGGAGGGGGTGTGTTGATGCCTTATAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR TCA 90 bp | CTCTTGAGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGAAGACTATGATAGATTTGTCTTaGTCCATCTTGGACTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLRISYKPGTNKPFLMKTMIDLS*SILDLA Trigger: TGCCAAGTCCAAGATGGATCAAGACAAATCTATCAT...AGTCTTCATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCTCAAGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGCTCTTGAGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGTGGTTTCTGACAAGATaGAATTGCATTGTTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LELLRISYKPGTNKPFLMWFLTR*NCIVQD Trigger: ATCTTGAACAATGCAATTGCATCTTGTCAGAAACCA...CATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCTCAAGAGCTCCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CCA 90 bp | ATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGAAGACTGGAGTAGAAGATCCATCTTGGACTTaGCATGATAGCTTTCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: ISYKPGTNKPFLMKTGVEDPSWT*HDSFLR Trigger: TCTTAGAAAGCTATCATGCCAAGTCCAAGATGGATC...TTCTACTCCAGTCTTCATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | AGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGAAGACTGGAGTAAAAGGTGACCCATCTTaGCGTAAGTTTTCAATTATC | + |
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Preference number: 4 (lower is better) Translates to: RISYKPGTNKPFLMKTGVKGDPS*RKFSII Trigger: GATAATTGAAAACTTACGGCAAGATGGGTCACCTTT...TACTCCAGTCTTCATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR GCA 90 bp | AGAATTTCTTATAAACCAGGAACCAACAAACCATTTCTGATGAAGACTGGAGTACTGACAAGATGCAATTaGATTGTTCAAGATGTATTC | + |
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Preference number: 4 (lower is better) Translates to: RISYKPGTNKPFLMKTGVLTRCN*IVQDVF Trigger: GAATACATCTTGAACAATGCAATTGCATCTTGTCAG...TACTCCAGTCTTCATCAGAAATGGTTTGTTGGTTCCTGGTTTATAAGAAATTCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CAA 90 bp | GTCAAAGTCTGTGCCATGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCGGACATTCTCAGATGTaGCAGAATAACGCTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VKVCAMATPSSHREALLRGHSQM*QNNAGS Trigger: AGAGCCAGCGTTATTCTGCAACATCTGAGAATGTCC...GCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCATGGCACAGACTTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CAA 90 bp | TGGCCACTCCAAGCAGCCATAGAGAAGCTCTGCTACGCTGCAGGAAGGTTCCATGGACATTCTCAGATGTaGCAGAATAACGCTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: WPLQAAIEKLCYAAGRFHGHSQM*QNNAGS Trigger: AGAGCCAGCGTTATTCTGCAACATCTGAGAATGTCC...ATGGAACCTTCCTGCAGCGTAGCAGAGCTTCTCTATGGCTGCTTGGAGTGGCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CAA 90 bp | TGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCTCAGCTGTCATTCAGACTCAGTGCGTaGAGGAACTTGGGTCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: CYAAGRFHKTLVYGSQLSFRLSA*RNLGLL Trigger: CAACAGACCCAAGTTCCTCAACGCACTGAGTCTGAA...TGACAGCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCTCAGCTTTGGAGTCTGGTCTTaGTCAATGAGAACTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: SSATLQEGSIKHWCMDLSFGVWS*SMRTSS Trigger: AGATGAAGTTCTCATTGACAAAGACCAGACTCCAAA...GCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159352.8 |
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| CDS-3UTR CAA 90 bp | TATAAGGCATCAACACACCCCCTCCAAATTTCAGGGTCTTTATTTTTGCTAACTTTCAGACTCAGTGCGTaGAGGAACTTGGGTCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: YKASTHPLQISGSLFLLTFRLSA*RNLGLL Trigger: CAACAGACCCAAGTTCCTCAACGCACTGAGTCTGAA...AGTTAGCAAAAATAAAGACCCTGAAATTTGGAGGGGGTGTGTTGATGCCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CAA 90 bp | TGCTACGCTGCAGGAAGGTTCCATAAAACATTGGTGTATGGATCTCAGCTGTCAATCTGTTCCACGGTATaGGCTGAAAAACAACTGTTT | + |
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Preference number: 5 (lower is better) Translates to: CYAAGRFHKTLVYGSQLSICSTV*AEKQLF Trigger: AAACAGTTGTTTTTCAGCCAATACCGTGGAACAGAT...TGACAGCTGAGATCCATACACCAATGTTTTATGGAACCTTCCTGCAGCGTAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCAATCATTTAAAAATGAGAAAACCATTTCCAGCTTGTAGGCTGCATGAATTTGGAGTCTGGTCTTaGTCAATGAGAACAGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: LPNHLKMRKPFPACRLHEFGVWS*SMRTAL Trigger: TAGAGCTGTTCTCATTGACAAAGACCAGACTCCAAA...TTCATGCAGCCTACAAGCTGGAAATGGTTTTCTCATTTTTAAATGATTGGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS CAA 90 bp | TGCCGGATCATATTCAGACTCAGTGCGTTGAGGAACTTGGGTCTGTaGAGCGTTATGACGCCTCCACAGCCTCTCCTCTCCAGCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: CRIIFRLSALRNLGL*SVMTPPQPLLSSST Trigger: AGTGCTGCTGGAGAGGAGAGGCTGTGGAGGCGTCATAACGCTCAACAGACCCAAGTTCCTCAACGCACTGAGTCTGAATATGATCCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS CAA 72 bp | ATATTCAGACTCAGTGCGTTGAGGAACTTGGGTCTGTaGAGCGTTATGACGCCTCCACAGCCTCTCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IFRLSALRNLGL*SVMTPPQPLLS Trigger: GGAGAGGAGAGGCTGTGGAGGCGTCATAACGCTCAACAGACCCAAGTTCCTCAACGCACTGAGTCTGAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS CAA 72 bp | TGCCGGATCATATTCAGACTCAGTGCGTTGAGGAACTaGGGTCTGTTGAGCGTTATGACGCCTCCACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: CRIIFRLSALRN*GLLSVMTPPQP Trigger: AGGCTGTGGAGGCGTCATAACGCTCAACAGACCCAAGTTCCTCAACGCACTGAGTCTGAATATGATCCGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS GCA 72 bp | CTGTGGATAGATCTGCCGGATCATATTCAGACTCAGTaGGTTGAGGAACTTGGGTCTGTTGAGCGTTATGAC | + |
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Preference number: 6 (lower is better) Translates to: LWIDLPDHIQTQ*VEELGSVERYD Trigger: GTCATAACGCTCAACAGACCCAAGTTCCTCAACGCACTGAGTCTGAATATGATCCGGCAGATCTATCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044478.7 ENSMUST00000159352.8 |
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| CDS TCA 72 bp | GCCCTTCCATACATGCTTGAGTTATCCGATATTCCATaGTCAGTACCTCTTGCAAAGTCTTTGAAGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ALPYMLELSDIP*SVPLAKSLKSP Trigger: AGGGCTCTTCAAAGACTTTGCAAGAGGTACTGATCATGGAATATCGGATAACTCAAGCATGTATGGAAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS CAA 72 bp | AACACCTTCATGAAAGTCATGCCCTTCCATACATGCTaGAGTTATCCGATATTCCATGATCAGTACCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: NTFMKVMPFHTC*SYPIFHDQYLL Trigger: CAAGAGGTACTGATCATGGAATATCGGATAACTCAAGCATGTATGGAAGGGCATGACTTTCATGAAGGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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| CDS CAA 90 bp | AACAGCTCTAACACCTTCATGAAAGTCATGCCCTTCCATACATGCTaGAGTTATCCGATATTCCATGATCAGTACCTCTTGCAAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: NSSNTFMKVMPFHTC*SYPIFHDQYLLQSL Trigger: AAGACTTTGCAAGAGGTACTGATCATGGAATATCGGATAACTCAAGCATGTATGGAAGGGCATGACTTTCATGAAGGTGTTAGAGCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044478.7 |
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