Pregenerated sensors for HHLA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072511Ensembl transcript IDs: ENSMUST00000100584.3, ENSMUST00000239034.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCCTTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATaGAGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTGCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: RPFQFIILWAVCTVI*SLHPSPPGIKTAAG Trigger: GCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTGAAAAGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR TCA 90 bp | CTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAATCCAGAATaGAGCCCAGGAGCATCTTCTATCAGTACTGGAAGACAGCTATGC | + |
|
Preference number: 1 (lower is better) Translates to: LTGEGHAFLLFNNPE*SPGASSISTGRQLC Trigger: GCATAGCTGTCTTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| 3UTR GCA 90 bp | AGTAATATGAAGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTaGAGGCATAATGGTAGGTTCTCAAACCCAAATCATAACTTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: SNMKPTSQSSWYQDC*RHNGRFSNPNHNFP Trigger: AGGAAAGTTATGATTTGGGTTTGAGAACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCTTCATATTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR GCA 90 bp | CACAGTAATATGAAGCCTACATCCCAGTCCTCCTGGTATCAAGACTaGTGCAGGCATAATGGTAGGTTCTCAAACCCAAATCATAACTTT | + |
|
Preference number: 1 (lower is better) Translates to: HSNMKPTSQSSWYQD*CRHNGRFSNPNHNF Trigger: AAAGTTATGATTTGGGTTTGAGAACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCTTCATATTACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR CCA 90 bp | ACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTaGTGTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTA | + |
|
Preference number: 1 (lower is better) Translates to: TQIITFLCTEASREA*CYSIDYKASAFVAL Trigger: TAATGCAACAAAGGCAGAAGCTTTATAATCAATGGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR TCA 90 bp | ACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTACACAGATTaGCAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: TPLIIKLLPLLHYTD*QDTKVLCFQRKTLP Trigger: GGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAATGCAACAAAGGCAGAAGCTTTATAATCAATGGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR CAA 90 bp | AAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTCTACAGATGACTaGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KFSASKEKPFPSTDD*ARACWILKNTAELE Trigger: TTCCAGCTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTGACTTGGCTCGGGCATaGTGGATTCTGAAAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: VVQCHIESSLECVRPFQFDLARA*WILKNT Trigger: TGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTC...AAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCACTGTACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTATCATCTTGACCAGGGTGAAGGTTTaGTGCCAGAAGTTACTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: CHIESSLECVRPFQFIILTRVKV*CQKLLL Trigger: TAACAGTAACTTCTGGCACCAAACCTTCACCCTGGT...CAAGATGATAAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACATCCCAGCTGAGCTGGAAATaGAACCAGGGTGAAGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: FSVYHLVGCMHSNMKPTSQLSWK*NQGEGL Trigger: CAAACCTTCACCCTGGTTTCATTTCCAGCTCAGCTG...GGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACATCCGGGCATGCTGGATTCTaGAAAATACAGCTGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSVYHLVGCMHSNMKPTSGHAGF*KIQLSW Trigger: CCAGCTCAGCTGTATTTTTCAGAATCCAGCATGCCC...GGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACATCCGAAATGAAACCAGGGTaGAGGTTTGGTGCCAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FSVYHLVGCMHSNMKPTSEMKPG*RFGARS Trigger: ACTTCTGGCACCAAACCTTCACCCTGGTTTCATTTC...GGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTTCTGAAAAATACAGCTaGGCTGGAAATGAAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: HRLTGHKSSLLPKKNPSLSEKYS*AGNETR Trigger: CCTGGTTTCATTTCCAGCTCAGCTGTATTTTTCAGA...AAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGTAGAGACTCAACACACTTTCAGTTAGTGAGAGAAAAATCTGTTGAAGTGTGGTCCTCCGCTTACTaGGGAAGGACATGCATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ESRDSTHFQLVREKSVEVWSSAY*GRTCIS Trigger: AGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCA...CACTTCAACAGATTTTTCTCTCACTAACTGAAAGTGTGTTGAGTCTCTACTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| 3UTR-3UTR CCA 90 bp | AGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTCTATTGGCTCGGGCATGCTaGATTCTGAAAAATACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RLTGHKSSLLPKKNPSLLLARAC*ILKNTA Trigger: AGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAA...TAGAAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGCATAATGGTAGGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTaGTGTTACTCCATTGATTAT | + |
|
Preference number: 2 (lower is better) Translates to: AGIMVGSQTQIITFLCTEASREA*CYSIDY Trigger: ATAATCAATGGAGTAACACCAGGCTTCTCTGCTTGC...CTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACCTACCATTATGCCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACATCCAGGGTGAAGGTTTGGTaGCAGAAGTTACTGTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FSVYHLVGCMHSNMKPTSRVKVW*QKLLLG Trigger: ACCTAACAGTAACTTCTGGCACCAAACCTTCACCCT...GGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR CAA 90 bp | TACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTACACAGATaGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YSIDYKASAFVALHR*TGHKSSLLPKKNPS Trigger: GGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAATGCAACAAAGGCAGAAGCTTTATAATCAATGGAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTATGACCCAGTTCCTAGATCTATTTGTAATTCATCTTTACAACACTTGCCTTTTAACAATCCAGAATaGAGCCCAGGAGCATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NYDPVPRSICNSSLQHLPFNNPE*SPGASS Trigger: AGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAAA...AGGCAAGTGTTGTAAAGATGAATTACAAATAGATCTAGGAACTGGGTCATAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| 3UTR TCA 72 bp | CTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTaGGCTGGAAATGAAACCAGGGTGAAGGTTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LGSGMLDSEKYS*AGNETRVKVWC Trigger: GCACCAAACCTTCACCCTGGTTTCATTTCCAGCTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR GCA 72 bp | AAACCCTTCCCTTCTACAGATGACTTGGCTCGGGCATaGTGGATTCTGAAAAATACAGCTGAGCTGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: KPFPSTDDLARA*WILKNTAELEM Trigger: CATTTCCAGCTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGGGAAGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR GCA 72 bp | AAGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTaGAGGCATAATGGTAGGTTCTCAAACCCAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: KPTSQSSWYQDC*RHNGRFSNPNH Trigger: ATGATTTGGGTTTGAGAACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR GCA 72 bp | ATGAAGCCTACATCCCAGTCCTCCTGGTATCAAGACTaGTGCAGGCATAATGGTAGGTTCTCAAACCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: MKPTSQSSWYQD*CRHNGRFSNPN Trigger: ATTTGGGTTTGAGAACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR CCA 72 bp | ATGCACAGTAATATGAAGCCTACATCCCAGTCCTCCTaGTATCAAGACTGCTGCAGGCATAATGGTAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MHSNMKPTSQSS*YQDCCRHNGRF Trigger: GAACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCTTCATATTACTGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR TCA 72 bp | CTCTGCTTCCAAAGAAAAACCCTTCCCTTCTACAGATaGCTTGGCTCGGGCATGCTGGATTCTGAAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: LCFQRKTLPFYR*LGSGMLDSEKY Trigger: GTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGGGAAGGGTTTTTCTTTGGAAGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR GCA 72 bp | ATGGTAGGTTCTCAAACCCAAATCATAACTTTCCTTTaGACTGAGGCAAGCAGAGAAGCCTGGTGTTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: MVGSQTQIITFL*TEASREAWCYS Trigger: GGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACCTACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR TCA 72 bp | CAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATaGAGCCTACATCCCAGTCCTCCTGGTATCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: QFIILWAVCTVI*SLHPSPPGIKT Trigger: AGTCTTGATACCAGGAGGACTGGGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR TCA 72 bp | GAAGGACATGCATTTCTACTGTTTAACAATCCAGAATaGAGCCCAGGAGCATCTTCTATCAGTACTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EGHAFLLFNNPE*SPGASSISTGR Trigger: TCTTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAAACAGTAGAAATGCATGTCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| 3UTR CCA 72 bp | ATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTaGTGTTACTCCATTGATTATAAAGCTTCTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ITFLCTEASREA*CYSIDYKASAF Trigger: AAAGGCAGAAGCTTTATAATCAATGGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR TCA 72 bp | ATAAAGTTAGTAAGGTTTTATGATAACCCTGAGACTTaGGAAATTGGTCCTCCGCTTACTGGGGAAGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: IKLVRFYDNPET*EIGPPLTGEGH Trigger: ATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTCAAGTCTCAGGGTTATCATAAAACCTTACTAACTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| 3UTR CCA 72 bp | AAATCTAAAAACAGATTAGGGGAAAGGGTACAAACCTaGGATTGGTGCTCAGATTTGGTGGATAATGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KSKNRLGERVQT*DWCSDLVDNGD Trigger: ATCTCCATTATCCACCAAATCTGAGCACCAATCCCAGGTTTGTACCCTTTCCCCTAATCTGTTTTTAGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| 3UTR TCA 72 bp | GGTACAGAGGATATCTTCCTTGTCTGTTTACATTCCTaGGTCTGTCAACTTGTTTATTCCCCTCTTCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: GTEDIFLVCLHS*VCQLVYSPLHL Trigger: TAAATGAAGAGGGGAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | GACTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGCTGGAAATGAAATTCCCGAGGCCCTGCTaGGCTGTGCTAGTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLARACWILKNTAELEMKFPRPC*AVLVGW Trigger: CCAGCCGACTAGCACAGCCCAGCAGGGCCTCGGGAA...TTTCATTTCCAGCTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTTCACTGTGAAGAAATGCACTGGGGGCAGGACATCACTGGTACAGAGGGGACACTTTGAAACTTaGTGGGCTGCTGGGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFFTVKKCTGGRTSLVQRGHFET*WAAGSR Trigger: CCGGGACCCAGCAGCCCATCAAGTTTCAAAGTGTCC...CCTCTGTACCAGTGATGTCCTGCCCCCAGTGCATTTCTTCACAGTGAAGAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTGTAATGGCCTCTTCTTaGAGGAGTGGCCGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSPPGIKTAAGIMVGVMASS*RSGRGH Trigger: GTGTCCTCGGCCACTCCTCCAAGAAGAGGCCATTAC...ACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTACAGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGGTGTTCCCGAGGCCCTaGTGGGCTGTGCTAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVQRISSLSVYIPESVNLVFPRP*WAVLVG Trigger: GCCGACTAGCACAGCCCAGCAGGGCCTCGGGAACAC...CAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCTGTACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGCATAATGGTAGGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGTGTTCCCGAGGCCCTaGTGGGCTGTGCTAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGIMVGSQTQIITFLCTEVFPRP*WAVLVG Trigger: GCCGACTAGCACAGCCCAGCAGGGCCTCGGGAACAC...CTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACCTACCATTATGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTTCACTGTGAAGAAATGCACTGGGGGCAGGACATCACTGGTACAGAGGGCACAGAGGCATTGCTaGAAGAAGCGGCAGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFFTVKKCTGGRTSLVQRAQRHC*KKRQSS Trigger: GGAACTCTGCCGCTTCTTCCAGCAATGCCTCTGTGC...CCTCTGTACCAGTGATGTCCTGCCCCCAGTGCATTTCTTCACAGTGAAGAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | AGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTTTGAGTTGTGAGCCTTaGAGTCCTTGCTGTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSPPGIKTAAGIMVGLSCEP*SPCCSP Trigger: AGGGGAACAGCAAGGACTTCAAGGCTCACAACTCAA...ACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTTCACTGTGAAGAAATGCACTGGGGGCAGGACATCACTGGTACAGAGGAGTGACTGCTGGCTTTaGGTTGTGAGCCTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFFTVKKCTGGRTSLVQRSDCWL*VVSLEV Trigger: GACTTCAAGGCTCACAACTCAAAGCCAGCAGTCACT...CCTCTGTACCAGTGATGTCCTGCCCCCAGTGCATTTCTTCACAGTGAAGAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | GTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTCCATCAGACATGGGGTaGGTTTCTTCATGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVQCHIESSLECVRPFQFPSDMG*VSSWPG Trigger: CCCTGGCCATGAAGAAACTCACCCCATGTCTGATGG...AAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCACTGTACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTTCCCCCATGGTGTTCTaGTCATGTTACTTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSPPGIKTAAGIMVGSPMVF*SCYLSL Trigger: CAAGCTCAAGTAACATGACCAGAACACCATGGGGGA...ACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | TGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTATCATCTTGTGCTGGGTCCCGGGCTaGCTCTTTCTCAGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHIESSLECVRPFQFIILCWVPG*LFLRDE Trigger: TTCATCCCTGAGAAAGAGCCAGCCCGGGACCCAGCA...CAAGATGATAAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCGCACAGAGGCATTGCTaGAAGAAGCGGCAGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQTQIITFLCTEASREAAQRHC*KKRQSS Trigger: GGAACTCTGCCGCTTCTTCCAGCAATGCCTCTGTGC...GGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGACTTGAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTTGAGTTGTGAGCCTTaGAGTCCTTGCTGTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLEKLVLRLLGKDMHFYLSCEP*SPCCSP Trigger: AGGGGAACAGCAAGGACTTCAAGGCTCACAACTCAA...GTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTCAAGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | GGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCATCTTCAATGGAGGCTaGTGTGGAGGGAAGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQTQIITFLCTEASREAIFNGG*CGGKAC Trigger: GCAAGCCTTCCCTCCACATCAGCCTCCATTGAAGAT...GGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTGCTCTTTCTCAGGGATaGATGGCCACTCTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVQCHIESSLECVRPFQFALSQG*MATLQE Trigger: TTCCTGCAGAGTGGCCATTCATCCCTGAGAAAGAGC...AAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCACTGTACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATAATGGTAGGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGGACACTTTGAAACTTaGTGGGCTGCTGGGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGIMVGSQTQIITFLCTEGHFET*WAAGSR Trigger: CCGGGACCCAGCAGCCCATCAAGTTTCAAAGTGTCC...CTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACCTACCATTATGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTGGTGTTACTCCGGGCACTACTGTGTGTaGCTATGGTCCCAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIITFLCTEASREAWCYSGHYCV*LWSQQE Trigger: TTCCTGTTGGGACCATAGGCACACACAGTAGTGCCC...GGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTACAGATGACTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGTACTGTGTGTGCCTATaGTCCCAACAGGAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTDDLARACWILKNTAEYCVCL*SQQEAL Trigger: CAGAGCTTCCTGTTGGGACCATAGGCACACACAGTA...CTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTTCACTGTGAAGAAATGCACTGGGGGCAGGACATCACTGGTACAGAGGTCCCCCATGGTGTTCTaGTCATGTTACTTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFFTVKKCTGGRTSLVQRSPMVF*SCYLSL Trigger: CAAGCTCAAGTAACATGACCAGAACACCATGGGGGA...CCTCTGTACCAGTGATGTCCTGCCCCCAGTGCATTTCTTCACAGTGAAGAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAGTGCTCCTGAGCTGCTaGGCATCTTCAATGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTVLLSC*ASSMEA Trigger: AGCCTCCATTGAAGATGCCCAGCAGCTCAGGAGCAC...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTTCACTGTGAAGAAATGCACTGGGGGCAGGACATCACTGGTACAGAGGACAGACTCTGCTGCATaGAGAAAGGATCCGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFFTVKKCTGGRTSLVQRTDSAA*RKDPFF Trigger: GAAAAACGGATCCTTTCTTCATGCAGCAGAGTCTGT...CCTCTGTACCAGTGATGTCCTGCCCCCAGTGCATTTCTTCACAGTGAAGAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCTACAGATGACTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGCCACCATCACACAGATaGAGACACAGTCCGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSTDDLARACWILKNTAEPPSHR*RHSPIH Trigger: ATGAATCGGACTGTGTCTTCATCTGTGTGATGGTGG...CTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | GACTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGCTGGAAATGAAAAGTGACTGCTGGCTTTaGGTTGTGAGCCTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLARACWILKNTAELEMKSDCWL*VVSLEV Trigger: GACTTCAAGGCTCACAACTCAAAGCCAGCAGTCACT...TTTCATTTCCAGCTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAATCTTCAATGGAGGCTaGTGTGGAGGGAAGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTIFNGG*CGGKAC Trigger: GCAAGCCTTCCCTCCACATCAGCCTCCATTGAAGAT...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAGCTCTTTCTCAGGGATaGATGGCCACTCTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTALSQG*MATLQE Trigger: TTCCTGCAGAGTGGCCATTCATCCCTGAGAAAGAGC...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | CTGGTACAGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGCCATCAGACATGGGGTaGGTTTCTTCATGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVQRISSLSVYIPESVNLPSDMG*VSSWPG Trigger: CCCTGGCCATGAAGAAACTCACCCCATGTCTGATGG...CAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCTGTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAGGGCACTACTGTGTGTaGCTATGGTCCCAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTGHYCV*LWSQQE Trigger: TTCCTGTTGGGACCATAGGCACACACAGTAGTGCCC...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTTACATTCCTGAGTCTGTCAACTTGTTTATTCCCCTCTTCATTTAAATTCCCGAGGCCCTGCTaGGCTGTGCTAGTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFTFLSLSTCLFPSSFKFPRPC*AVLVGW Trigger: CCAGCCGACTAGCACAGCCCAGCAGGGCCTCGGGAA...TTTAAATGAAGAGGGGAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | CAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTGGTGTTACTCCAGCTGGTGCTTGGGTTaGGTTTGTAGTCTGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QIITFLCTEASREAWCYSSWCLG*VCSLCS Trigger: GGAACACAGACTACAAACCCAACCCAAGCACCAGCT...GGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATAATGGTAGGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGATTTCCTGTGCTCCTaGGCTGCTGGGCATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGIMVGSQTQIITFLCTEDFLCS*AAGHLQ Trigger: TTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATC...CTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACCTACCATTATGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTGGTGTTACTCCATTTCCAGACACTGTTaGAGGTGGGAGAGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QIITFLCTEASREAWCYSISRHC*RWESHF Trigger: GAAATGGCTCTCCCACCTGCAACAGTGTCTGGAAAT...GGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAACCCTTCCCTTCTACAGATGACTTGGCTCGGGCATGCTGGATTCTGAAACAGATACCCATTGTGTaGTCCAGCGTACAGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: EKPFPSTDDLARACWILKQIPIV*SSVQNM Trigger: CATATTCTGTACGCTGGAGCACACAATGGGTATCTG...TTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGGGAAGGGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTTTAACAATCCAGAATGAAGCCCAGGAGCATCTTCTATCAGTACTGGAACCTGTGCTCCTGAGCTaGTGGGCATCTTCAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCLTIQNEAQEHLLSVLEPVLLS*WASSME Trigger: CTCCATTGAAGATGCCCAGCAGCTCAGGAGCACAGG...TTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAAACAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | CTGAGACTTGAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACCGACTGTCTTTGGGTTaGAAATGTTGTAGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLEKLVLRLLGKDMHFYRLSLG*KCCRWP Trigger: TGGCCATCTACAACATTTCCAACCCAAAGACAGTCG...GTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTCAAGTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCTACAGATGACTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGCGACTGTCTTTGGGTTaGAAATGTTGTAGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSTDDLARACWILKNTAERLSLG*KCCRWP Trigger: TGGCCATCTACAACATTTCCAACCCAAAGACAGTCG...CTCAGCTGTATTTTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTACAGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGGCTGGGCATCTTCAATaGAGGCTGATGTGGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVQRISSLSVYIPESVNLAGHLQ*RLMWRE Trigger: TTCCCTCCACATCAGCCTCCATTGAAGATGCCCAGC...CAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCTGTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAAGCTGGTGCTTGGGTTaGGTTTGTAGTCTGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTSWCLG*VCSLCS Trigger: GGAACACAGACTACAAACCCAACCCAAGCACCAGCT...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | AGGGTACAAACCTGGGATTGGTGCTCAGATTTGGTGGATAATGGAGATTTAAAAGATTTCCTGTGCTCCTaGGCTGCTGGGCATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RVQTWDWCSDLVDNGDLKDFLCS*AAGHLQ Trigger: TTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATC...TTTTAAATCTCCATTATCCACCAAATCTGAGCACCAATCCCAGGTTTGTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | ATTACACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTGTGCTCCTGAGCTaGTGGGCATCTTCAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITQIDRTQKFSASKEKPFPVLLS*WASSME Trigger: CTCCATTGAAGATGCCCAGCAGCTCAGGAGCACAGG...GAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTACAGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGGACTCTAGGAGCTGGTaGTTGGGTTGGGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVQRISSLSVYIPESVNLDSRSW*LGWVCS Trigger: ACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTC...CAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCTGTACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | CACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTGACTCTAGGAGCTGGTaGTTGGGTTGGGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRLTGHKSSLLPKKNPSLDSRSW*LGWVCS Trigger: ACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTC...AAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTACAGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGGGTAGGGAATTTGGCTaGGTCGACTGTCTTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVQRISSLSVYIPESVNLGREFG*VDCLWV Trigger: AACCCAAAGACAGTCGACCCAGCCAAATTCCCTACC...CAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCTGTACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | AGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTCTAGCTGGGCATCTTCAATaGAGGCTGATGTGGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLTGHKSSLLPKKNPSLLAGHLQ*RLMWRE Trigger: TTCCCTCCACATCAGCCTCCATTGAAGATGCCCAGC...TAGAAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | ATTACACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCGTGCTCCTGAGCTGCTaGGCATCTTCAATGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITQIDRTQKFSASKEKPFVLLSC*ASSMEA Trigger: AGCCTCCATTGAAGATGCCCAGCAGCTCAGGAGCAC...GAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | TTAACAATCCAGAATGAAGCCCAGGAGCATCTTCTATCAGTACTGGAAGACAGCTTTCTCAGGGATGAATaGCCACTCTGCAGGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: LTIQNEAQEHLLSVLEDSFLRDE*PLCRNT Trigger: GGTATTCCTGCAGAGTGGCCATTCATCCCTGAGAAA...GCTGTCTTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | GAAAGTAGAGACTCAACACACTTTCAGTTAGTGAGAGAAAAATCTGTTGAAGTGTGCTGGGTCCCGGGCTaGCTCTTTCTCAGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESRDSTHFQLVREKSVEVCWVPG*LFLRDE Trigger: TTCATCCCTGAGAAAGAGCCAGCCCGGGACCCAGCA...CACTTCAACAGATTTTTCTCTCACTAACTGAAAGTGTGTTGAGTCTCTACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACACGTTTTTCTCCTTCTTaGGGCCTTCATTTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTRFSPS*GLHFQT Trigger: TGTCTGGAAATGAAGGCCTCAAGAAGGAGAAAAACG...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | TTAACAATCCAGAATGAAGCCCAGGAGCATCTTCTATCAGTACTGGAAGACAGCAGAAAGATTCCTTCCTaGCTTTCCCACCATCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LTIQNEAQEHLLSVLEDSRKIPS*LSHHHT Trigger: TGTGTGATGGTGGGAAAGTCAGGAAGGAATCTTTCT...GCTGTCTTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAAGACACTGTTGCAGGTaGGAGAGCCATTTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTRHCCR*ESHFFI Trigger: GATAAAGAAATGGCTCTCCCACCTGCAACAGTGTCT...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTAATCTGATAAGTCATTaGTCCTATTGCTCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSPPGIKTAAGIMVGNLISH*SYCSNS Trigger: ACTGTTTGAGCAATAGGACCAATGACTTATCAGATT...ACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | CACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTTTTCTCAGGGATGAATaGCCACTCTGCAGGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: HRLTGHKSSLLPKKNPSLFLRDE*PLCRNT Trigger: GGTATTCCTGCAGAGTGGCCATTCATCCCTGAGAAA...AAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGTTTATTCGTAATGGCCTCTTCTTaGAGGAGTGGCCGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RGYLPCLFTFLSLSTCLFVMASS*RSGRGH Trigger: GTGTCCTCGGCCACTCCTCCAAGAAGAGGCCATTAC...GAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGCCTGGTGTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTATCTGGTCATGTTACTTaGGCTTGGGGCACTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: REAWCYSIDYKASAFVALSGHVT*AWGTTV Trigger: CACAGTAGTGCCCCAAGCTCAAGTAACATGACCAGA...TAATGCAACAAAGGCAGAAGCTTTATAATCAATGGAGTAACACCAGGCTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTTTAAGACCAGACACTaGATTCCAGAGAAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSQTQIITFLCTEASREAFKTRH*IPEKED Trigger: ATCCTCTTTCTCTGGAATGCAGTGTCTGGTCTTAAA...GGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTACAAACCTGGGATTGGTGCTCAGATTTGGTGGATAATGGAGATTTAAAAATTTCCAGACACTGTTaGAGGTGGGAGAGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVQTWDWCSDLVDNGDLKISRHC*RWESHF Trigger: GAAATGGCTCTCCCACCTGCAACAGTGTCTGGAAAT...TTTTAAATCTCCATTATCCACCAAATCTGAGCACCAATCCCAGGTTTGTACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | CTGGTACAGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGAGTCATTGGTCCTATTaGTCAAACAGTAGCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVQRISSLSVYIPESVNLSHWSY*SNSSSA Trigger: GGCACTGCTACTGTTTGAGCAATAGGACCAATGACT...CAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCTGTACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | GTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTCTGGAAACATCTGTTTaGTTTCTGCCAACTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVQCHIESSLECVRPFQFLETSV*FLPTLS Trigger: AGAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAG...AAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCACTGTACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGAGAAGCCTGGTGTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGAGACACTGTTGCAGGTaGGAGAGCCATTTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: QAEKPGVTPLIIKLLPLLRHCCR*ESHFFI Trigger: GATAAAGAAATGGCTCTCCCACCTGCAACAGTGTCT...CAACAAAGGCAGAAGCTTTATAATCAATGGAGTAACACCAGGCTTCTCTGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTACAAACCTGGGATTGGTGCTCAGATTTGGTGGATAATGGAGATTTAAAACACAGTCCGATTCATTaGTCTGAGTCACAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVQTWDWCSDLVDNGDLKHSPIH*SESQRG Trigger: TCCTCTCTGTGACTCAGACCAATGAATCGGACTGTG...TTTTAAATCTCCATTATCCACCAAATCTGAGCACCAATCCCAGGTTTGTACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | TTACACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCACAGTCCGATTCATTaGTCTGAGTCACAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHRLTGHKSSLLPKKNPSHSPIH*SESQRG Trigger: TCCTCTCTGTGACTCAGACCAATGAATCGGACTGTG...GGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | TTACACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCGTTTTTCTCCTTCTTaGGGCCTTCATTTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHRLTGHKSSLLPKKNPSRFSPS*GLHFQT Trigger: TGTCTGGAAATGAAGGCCTCAAGAAGGAGAAAAACG...GGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | TTACACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCACAGACTCTGCTGCATaGAGAAAGGATCCGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHRLTGHKSSLLPKKNPSTDSAA*RKDPFF Trigger: GAAAAACGGATCCTTTCTTCATGCAGCAGAGTCTGT...GGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | AGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTCTATGCCAACTCTTTCTCTaGAGGAGCACTTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLTGHKSSLLPKKNPSLLCQLFL*RSTCLC Trigger: ACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCA...TAGAAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGTTTATTCTCTGGTCATGTTACTTaGGCTTGGGGCACTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGYLPCLFTFLSLSTCLFSGHVT*AWGTTV Trigger: CACAGTAGTGCCCCAAGCTCAAGTAACATGACCAGA...GAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | AGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTCTAAGTCATTGGTCCTATTaGTCAAACAGTAGCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLTGHKSSLLPKKNPSLLSHWSY*SNSSSA Trigger: GGCACTGCTACTGTTTGAGCAATAGGACCAATGACT...TAGAAGGGAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTTTAACAATCCAGAATGAAGCCCAGGAGCATCTTCTATCAGTACTGGAACAGATACCCATTGTGTaGTCCAGCGTACAGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: YCLTIQNEAQEHLLSVLEQIPIV*SSVQNM Trigger: CATATTCTGTACGCTGGAGCACACAATGGGTATCTG...TTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAAACAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACACTGGAAACATCTGTTTaGTTTCTGCCAACTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTLETSV*FLPTLS Trigger: AGAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAG...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | TACTGTTTAACAATCCAGAATGAAGCCCAGGAGCATCTTCTATCAGTACTGGAAAGAGAGGATGGAGGTTaGCTTAAAAATCTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCLTIQNEAQEHLLSVLEREDGG*LKNLSE Trigger: CTCACTGAGATTTTTAAGTCAACCTCCATCCTCTCT...TTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAAACAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGCCTGGTGTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTAAGAAAGATTCCTTCCTaGCTTTCCCACCATCACACA | + |
|
Preference number: 4 (lower is better) Translates to: REAWCYSIDYKASAFVALRKIPS*LSHHHT Trigger: TGTGTGATGGTGGGAAAGTCAGGAAGGAATCTTTCT...TAATGCAACAAAGGCAGAAGCTTTATAATCAATGGAGTAACACCAGGCTTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CCA 90 bp | AACTATGACCCAGTTCCTAGATCTATTTGTAATTCATCTTTACAACACTTGCCTTACTGTGTGTGCCTATaGTCCCAACAGGAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NYDPVPRSICNSSLQHLPYCVCL*SQQEAL Trigger: CAGAGCTTCCTGTTGGGACCATAGGCACACACAGTA...AGGCAAGTGTTGTAAAGATGAATTACAAATAGATCTAGGAACTGGGTCATAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGTAGAGACTCAACACACTTTCAGTTAGTGAGAGAAAAATCTGTTGAAGTGCCACCAGCAATGCTGTaGAATCTGATAAGTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESRDSTHFQLVREKSVEVPPAML*NLISHW Trigger: CCAATGACTTATCAGATTTCACAGCATTGCTGGTGG...CACTTCAACAGATTTTTCTCTCACTAACTGAAAGTGTGTTGAGTCTCTACTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | ATTACACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCAGAGAGGATGGAGGTTaGCTTAAAAATCTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITQIDRTQKFSASKEKPFREDGG*LKNLSE Trigger: CTCACTGAGATTTTTAAGTCAACCTCCATCCTCTCT...GAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR TCA 90 bp | AACTATGACCCAGTTCCTAGATCTATTTGTAATTCATCTTTACAACACTTGCCTCCACCATCACACAGATaGAGACACAGTCCGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NYDPVPRSICNSSLQHLPPPSHR*RHSPIH Trigger: ATGAATCGGACTGTGTCTTCATCTGTGTGATGGTGG...AGGCAAGTGTTGTAAAGATGAATTACAAATAGATCTAGGAACTGGGTCATAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGTAGAGACTCAACACACTTTCAGTTAGTGAGAGAAAAATCTGTTGAAGTGTGCCAACTCTTTCTCTaGAGGAGCACTTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESRDSTHFQLVREKSVEVCQLFL*RSTCLC Trigger: ACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCA...CACTTCAACAGATTTTTCTCTCACTAACTGAAAGTGTGTTGAGTCTCTACTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | AGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGTTTATTCGAAGACAGACTCTGCTaGATGAAGAAAGGATCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYLPCLFTFLSLSTCLFEDRLC*MKKGSV Trigger: AACGGATCCTTTCTTCATGCAGCAGAGTCTGTCTTC...GAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACAAATCTGATAAGTCATTaGTCCTATTGCTCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTNLISH*SYCSNS Trigger: ACTGTTTGAGCAATAGGACCAATGACTTATCAGATT...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGCCTGGTGTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTATTCTCAAGACATTTTTaGTTCAAGGTTCGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: REAWCYSIDYKASAFVALFSRHF*FKVREW Trigger: CCATTCTCGAACCTTGAAGCAAAAATGTCTTGAGAA...TAATGCAACAAAGGCAGAAGCTTTATAATCAATGGAGTAACACCAGGCTTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| 3UTR CAA 72 bp | GATTATAAAGCTTCTGCCTTTGTTGCATTACACAGATaGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DYKASAFVALHR*TGHKSSLLPKK Trigger: TTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAATGCAACAAAGGCAGAAGCTTTATAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | AACTATGACCCAGTTCCTAGATCTATTTGTAATTCATCTTTACAACACTTGCCTTTTAAGACCAGACACTaGATTCCAGAGAAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NYDPVPRSICNSSLQHLPFKTRH*IPEKED Trigger: ATCCTCTTTCTCTGGAATGCAGTGTCTGGTCTTAAA...AGGCAAGTGTTGTAAAGATGAATTACAAATAGATCTAGGAACTGGGTCATAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR GCA 90 bp | ATTACACAGATTGACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCAGTACGGAGAAGAATTaGTTGCTATCTTTTAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITQIDRTQKFSASKEKPFSTEKN*LLSFKA Trigger: AGCTTTAAAAGATAGCAAGCAATTCTTCTCCGTACT...GAAGGGTTTTTCTTTGGAAGCAGAGAACTTTTGTGTCCTGTCAATCTGTGTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTTTACATTCCTGAGTCTGTCAACTTGTTTATTCCCCTCTTCATTTAAAAGTACGGAGAAGAATTaGTTGCTATCTTTTAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLFTFLSLSTCLFPSSFKSTEKN*LLSFKA Trigger: AGCTTTAAAAGATAGCAAGCAATTCTTCTCCGTACT...TTTAAATGAAGAGGGGAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS TCA 90 bp | CAGATTTCCTGTGCTCCTGAGCTGCTGGGCATCTTCAATGGAGGCTaGTGTGGAGGGAAGGCTTGCCCAGGGTGGTCCTTCAGGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QISCAPELLGIFNGG*CGGKACPGWSFRCA Trigger: AGCACACCTGAAGGACCACCCTGGGCAAGCCTTCCCTCCACATCAGCCTCCATTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 90 bp | TGCTGGGTCCCGGGCTGGCTCTTTCTCAGGGATGAATGGCCACTCTaGAGGAATACCATCTGTCTGAGGGACTCTAGGAGCTGGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CWVPGWLFLRDEWPL*RNTICLRDSRSWCL Trigger: CAAGCACCAGCTCCTAGAGTCCCTCAGACAGATGGTATTCCTGCAGAGTGGCCATTCATCCCTGAGAAAGAGCCAGCCCGGGACCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS TCA 90 bp | GTAATGGCCTCTTCTTGGAGGAGTGGCCGAGGACACTTTGAAACTTaGTGGGCTGCTGGGTCCCGGGCTGGCTCTTTCTCAGGGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VMASSWRSGRGHFET*WAAGSRAGSFSGMN Trigger: ATTCATCCCTGAGAAAGAGCCAGCCCGGGACCCAGCAGCCCATCAAGTTTCAAAGTGTCCTCGGCCACTCCTCCAAGAAGAGGCCATTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS TCA 90 bp | AGTATCTGTAATGGCCTCTTCTTGGAGGAGTGGCCGAGGACACTTTaGAACTTGATGGGCTGCTGGGTCCCGGGCTGGCTCTTTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SICNGLFLEEWPRTL*NLMGCWVPGWLFLR Trigger: CCTGAGAAAGAGCCAGCCCGGGACCCAGCAGCCCATCAAGTTTCAAAGTGTCCTCGGCCACTCCTCCAAGAAGAGGCCATTACAGATACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 90 bp | GTCAGTATTCCAGTAGGATGCAACAGATTTCCTGTGCTCCTGAGCTaGTGGGCATCTTCAATGGAGGCTGATGTGGAGGGAAGGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSIPVGCNRFPVLLS*WASSMEADVEGRLA Trigger: GGCAAGCCTTCCCTCCACATCAGCCTCCATTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATCTGTTGCATCCTACTGGAATACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 90 bp | CTGGGCTGTGCTAGTCGGCTGGGTGTAGTCAGTATTCCAGTAGGATaGAACAGATTTCCTGTGCTCCTGAGCTGCTGGGCATCTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LGCASRLGVVSIPVG*NRFPVLLSCWASSM Trigger: CATTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATCTGTTGCATCCTACTGGAATACTGACTACACCCAGCCGACTAGCACAGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 90 bp | CCACTCTGCAGGAATACCATCTGTCTGAGGGACTCTAGGAGCTGGTaGTTGGGTTGGGTTTGTAGTCTGTGTTCCAGGCATGAGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLCRNTICLRDSRSW*LGWVCSLCSRHECS Trigger: GGAACACTCATGCCTGGAACACAGACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTCCCTCAGACAGATGGTATTCCTGCAGAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 90 bp | AGTATTCCAGTAGGATGCAACAGATTTCCTGTGCTCCTGAGCTGCTaGGCATCTTCAATGGAGGCTGATGTGGAGGGAAGGCTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIPVGCNRFPVLLSC*ASSMEADVEGRLAQ Trigger: CTGGGCAAGCCTTCCCTCCACATCAGCCTCCATTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATCTGTTGCATCCTACTGGAATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGACTTGAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACATGTGGAGGGAAGGCTaGCCCAGGGTGGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRLEKLVLRLLGKDMHFYMWREG*PRVVLQ Trigger: CTGAAGGACCACCCTGGGCAAGCCTTCCCTCCACAT...GTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTCAAGTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS CCA 90 bp | ACAGTAGCAGTGCCGGGTAGGGAATTTGGCTGGGTCGACTGTCTTTaGGTTGGAAATGTTGTAGATGGCCACGGAAACCTTGTGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVAVPGREFGWVDCL*VGNVVDGHGNLVKG Trigger: GCCTTTCACAAGGTTTCCGTGGCCATCTACAACATTTCCAACCCAAAGACAGTCGACCCAGCCAAATTCCCTACCCGGCACTGCTACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 90 bp | GGTCCTATTGCTCAAACAGTAGCAGTGCCGGGTAGGGAATTTGGCTaGGTCGACTGTCTTTGGGTTGGAAATGTTGTAGATGGCCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPIAQTVAVPGREFG*VDCLWVGNVVDGHG Trigger: TCCGTGGCCATCTACAACATTTCCAACCCAAAGACAGTCGACCCAGCCAAATTCCCTACCCGGCACTGCTACTGTTTGAGCAATAGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 90 bp | TGCACAGAGGCATTGCTGGAAGAAGCGGCAGAGTTCCATCAGACATaGGGTGAGTTTCTTCATGGCCAGGGGCAGAGGAGTATCTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: CTEALLEEAAEFHQT*GEFLHGQGQRSICN Trigger: ATTACAGATACTCCTCTGCCCCTGGCCATGAAGAAACTCACCCCATGTCTGATGGAACTCTGCCGCTTCTTCCAGCAATGCCTCTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGTGTGTCAGGCCTTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTATGTGGAGGGAAGGCTaGCCCAGGGTGGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGVCQAFSVYHLVGCMHSMWREG*PRVVLQ Trigger: CTGAAGGACCACCCTGGGCAAGCCTTCCCTCCACAT...ACTGTGCATACAGCCCACAAGATGATAAACTGAAAAGGCCTGACACACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTCATTTCCAGACACTGTaGCAGGTGGGAGAGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHPSPPGIKTAAGIMVGHFQTL*QVGEPF Trigger: AAATGGCTCTCCCACCTGCAACAGTGTCTGGAAATG...ACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTCTTCACTGTGAAGAAATGCACTGGGGGCAGGACATCACTGGTACAGAGGTCTCTGAAGGAGCACTaGTCTTTGTCCAGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFFTVKKCTGGRTSLVQRSLKEH*SLSRGE Trigger: CTCTCCCCTGGACAAAGACAAGTGCTCCTTCAGAGA...CCTCTGTACCAGTGATGTCCTGCCCCCAGTGCATTTCTTCACAGTGAAGAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CAA 90 bp | CTGAGACTTGAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACGTGGCCGAGGACACTTaGAAACTTGATGGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRLEKLVLRLLGKDMHFYVAEDT*KLDGLL Trigger: CAGCAGCCCATCAAGTTTCAAAGTGTCCTCGGCCAC...GTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTCAAGTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS TCA 90 bp | GTGCTCCAGCGTACAGAATATGGTCTTAGAAGTGACTGCTGGCTTTaGGTTGTGAGCCTTGAAGTCCTTGCTGTTCCCCTGGTAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLQRTEYGLRSDCWL*VVSLEVLAVPLVVA Trigger: AGCAACTACCAGGGGAACAGCAAGGACTTCAAGGCTCACAACTCAAAGCCAGCAGTCACTTCTAAGACCATATTCTGTACGCTGGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 90 bp | GCTTCTGAACTGAAATCCCGCTTTTGGATTGCACAGAGGCATTGCTaGAAGAAGCGGCAGAGTTCCATCAGACATGGGGTGAGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASELKSRFWIAQRHC*KKRQSSIRHGVSFF Trigger: GAAGAAACTCACCCCATGTCTGATGGAACTCTGCCGCTTCTTCCAGCAATGCCTCTGTGCAATCCAAAAGCGGGATTTCAGTTCAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTACATCCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTCTGGGTCGACTGTCTTaGGGTTGGAAATGTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLHPSPPGIKTAAGIMVGLGRLS*GWKCCR Trigger: TCTACAACATTTCCAACCCAAAGACAGTCGACCCAG...ACCTACCATTATGCCTGCAGCAGTCTTGATACCAGGAGGACTGGGATGTAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | CAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTGGTGTTACTCCTGTAATGGCCTCTTCTaGGAGGAGTGGCCGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QIITFLCTEASREAWCYSCNGLF*EEWPRT Trigger: TGTCCTCGGCCACTCCTCCAAGAAGAGGCCATTACA...GGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTCTTCACTGTGAAGAAATGCACTGGGGGCAGGACATCACTGGTACAGAGGCTGGGTCGACTGTCTTaGGGTTGGAAATGTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFFTVKKCTGGRTSLVQRLGRLS*GWKCCR Trigger: TCTACAACATTTCCAACCCAAAGACAGTCGACCCAG...CCTCTGTACCAGTGATGTCCTGCCCCCAGTGCATTTCTTCACAGTGAAGAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS TCA 90 bp | AGGAAGCTCTGGAAACATCTGTTTGCTTTCTGCCAACTCTTTCTCTaGAGGAGCACTTGTCTTTGTCCAGGGGAGAGACTTCAGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKLWKHLFAFCQLFL*RSTCLCPGERLQSR Trigger: TCTGCTCTGAAGTCTCTCCCCTGGACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAGAGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 90 bp | TGTGTGTGCCTATGGTCCCAACAGGAAGCTCTGGAAACATCTGTTTaGTTTCTGCCAACTCTTTCTCTGAAGGAGCACTTGTCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVCLWSQQEALETSV*FLPTLSLKEHLSLS Trigger: GGACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAGAGCTTCCTGTTGGGACCATAGGCACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 90 bp | ATGGTGTTCTGGTCATGTTACTTGAGCTTGGGGCACTACTGTGTGTaGCTATGGTCCCAACAGGAAGCTCTGGAAACATCTGTTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MVFWSCYLSLGHYCV*LWSQQEALETSVCF Trigger: AAAGCAAACAGATGTTTCCAGAGCTTCCTGTTGGGACCATAGGCACACACAGTAGTGCCCCAAGCTCAAGTAACATGACCAGAACACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAACCCTTCCCTTCTACAGATGACTTGGCTCGGGCATGCTGGATTCTGAAACTTGTGTGTATCTATTaGTCCCCCATGGTGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EKPFPSTDDLARACWILKLVCIY*SPMVFW Trigger: CCAGAACACCATGGGGGACAAATAGATACACACAAG...TTTCAGAATCCAGCATGCCCGAGCCAAGTCATCTGTAGAAGGGAAGGGTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS TCA 90 bp | AGAAGTCAGAAAGATTCCTTCCTGACTTTCCCACCATCACACAGATaGAGACACAGTCCGATTCATTGGTCTGAGTCACAGAGAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RSQKDSFLTFPPSHR*RHSPIHWSESQRGW Trigger: CCATCCTCTCTGTGACTCAGACCAATGAATCGGACTGTGTCTTCATCTGTGTGATGGTGGGAAAGTCAGGAAGGAATCTTTCTGACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 90 bp | TATTCCAGACAATACCTTATGGCTTCTGAACTGAAATCCCGCTTTTaGATTGCACAGAGGCATTGCTGGAAGAAGCGGCAGAGTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: YSRQYLMASELKSRF*IAQRHCWKKRQSSI Trigger: GATGGAACTCTGCCGCTTCTTCCAGCAATGCCTCTGTGCAATCCAAAAGCGGGATTTCAGTTCAGAAGCCATAAGGTATTGTCTGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | CAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTGGTGTTACTCCCCATACACAGCCTTATaGGAGGACAATGAAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QIITFLCTEASREAWCYSPYTAL*EDNEAG Trigger: TCCTGCTTCATTGTCCTCCAATAAGGCTGTGTATGG...GGAGTAACACCAGGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACACATTTCCAGACACTGTaGCAGGTGGGAGAGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTHFQTL*QVGEPF Trigger: AAATGGCTCTCCCACCTGCAACAGTGTCTGGAAATG...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CAA 90 bp | GCAGGCATAATGGTAGGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGTCTCTGAAGGAGCACTaGTCTTTGTCCAGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGIMVGSQTQIITFLCTESLKEH*SLSRGE Trigger: CTCTCCCCTGGACAAAGACAAGTGCTCCTTCAGAGA...CTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACCTACCATTATGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTGGGTACTGTAGGTGCTaGTGTGTATCTATTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVQCHIESSLECVRPFQFGYCRC*CVSICP Trigger: GGGACAAATAGATACACACAAGCACCTACAGTACCC...AAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCACTGTACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS GCA 90 bp | GGATCCGTTTTTCTCCTTCTTGAGGCCTTCATTTCCAGACACTGTTaGAGGTGGGAGAGCCATTTCTTTATCTTTCTTGCCTTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSVFLLLEAFISRHC*RWESHFFIFLAFSF Trigger: AAAGGAGAAGGCAAGAAAGATAAAGAAATGGCTCTCCCACCTGCAACAGTGTCTGGAAATGAAGGCCTCAAGAAGGAGAAAAACGGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAAGCCTGGTGTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTAGTGGCCGAGGACACTTaGAAACTTGATGGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: REAWCYSIDYKASAFVALVAEDT*KLDGLL Trigger: CAGCAGCCCATCAAGTTTCAAAGTGTCCTCGGCCAC...TAATGCAACAAAGGCAGAAGCTTTATAATCAATGGAGTAACACCAGGCTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS CCA 90 bp | GTTTTTCTCCTTCTTGAGGCCTTCATTTCCAGACACTGTTGCAGGTaGGAGAGCCATTTCTTTATCTTTCTTGCCTTCTCCTTTAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VFLLLEAFISRHCCR*ESHFFIFLAFSFKT Trigger: GGTCTTAAAGGAGAAGGCAAGAAAGATAAAGAAATGGCTCTCCCACCTGCAACAGTGTCTGGAAATGAAGGCCTCAAGAAGGAGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTTTTCAGTTTTCTGGAAACATCTGTTaGCTTTCTGCCAACTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVQCHIESSLECVRPFQFSGNIC*LSANSF Trigger: GAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAGA...AAACTGAAAAGGCCTGACACACTCCAGAGAGCTCTCAATATGGCACTGTACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTAGAGACTCAACACACTTTCAGTTAGTGAGAGAAAAATCTGTTGAAGTGTGTAATGGCCTCTTCTaGGAGGAGTGGCCGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ESRDSTHFQLVREKSVEVCNGLF*EEWPRT Trigger: TGTCCTCGGCCACTCCTCCAAGAAGAGGCCATTACA...CACTTCAACAGATTTTTCTCTCACTAACTGAAAGTGTGTTGAGTCTCTACTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS TCA 90 bp | GAAACCAAGAATAGTATTCCAGACAATACCTTATGGCTTCTGAACTaGAATCCCGCTTTTGGATTGCACAGAGGCATTGCTGGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETKNSIPDNTLWLLN*NPAFGLHRGIAGRS Trigger: GCTTCTTCCAGCAATGCCTCTGTGCAATCCAAAAGCGGGATTTCAGTTCAGAAGCCATAAGGTATTGTCTGGAATACTATTCTTGGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGACTTGAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACAAATCTGATAAGTCATaGGTCCTATTGCTCAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LRLEKLVLRLLGKDMHFYKSDKS*VLLLKQ Trigger: CTGTTTGAGCAATAGGACCAATGACTTATCAGATTT...GTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTCAAGTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CAA 90 bp | GAGAAATTGGTCCTCCGCTTACTGGGGAAGGACATGCATTTCTACTGTTTAACATCTGGAAACATCTGTTaGCTTTCTGCCAACTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKLVLRLLGKDMHFYCLTSGNIC*LSANSF Trigger: GAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAGA...TGTTAAACAGTAGAAATGCATGTCCTTCCCCAGTAAGCGGAGGACCAATTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CAA 90 bp | AGGGTACAAACCTGGGATTGGTGCTCAGATTTGGTGGATAATGGAGATTTAAAAGGGTACTGTAGGTGCTaGTGTGTATCTATTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVQTWDWCSDLVDNGDLKGYCRC*CVSICP Trigger: GGGACAAATAGATACACACAAGCACCTACAGTACCC...TTTTAAATCTCCATTATCCACCAAATCTGAGCACCAATCCCAGGTTTGTACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS TCA 90 bp | GACACAGTCCGATTCATTGGTCTGAGTCACAGAGAGGATGGAGGTTaGCTTAAAAATCTCAGTGAGGTAGCTTGTAGAATTTCCAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: DTVRFIGLSHREDGG*LKNLSEVACRISNN Trigger: ATTGTTGGAAATTCTACAAGCTACCTCACTGAGATTTTTAAGTCAACCTCCATCCTCTCTGTGACTCAGACCAATGAATCGGACTGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS TCA 90 bp | CTTCAGAAACCAAGAATAGTATTCCAGACAATACCTTATGGCTTCTaGACTGAAATCCCGCTTTTGGATTGCACAGAGGCATTGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQKPRIVFQTIPYGF*TEIPLLDCTEALLE Trigger: TTCCAGCAATGCCTCTGTGCAATCCAAAAGCGGGATTTCAGTTCAGAAGCCATAAGGTATTGTCTGGAATACTATTCTTGGTTTCTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | TTAACAATCCAGAATGAAGCCCAGGAGCATCTTCTATCAGTACTGGAAGACAGCTCTTTTAAAGCTCTATaGAGCATGCCATTCACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTIQNEAQEHLLSVLEDSSFKAL*SMPFTS Trigger: GCTTGTGAATGGCATGCTCAATAGAGCTTTAAAAGA...GCTGTCTTCCAGTACTGATAGAAGATGCTCCTGGGCTTCATTCTGGATTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CAA 90 bp | GGTTCTCAAACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCAAATCTGATAAGTCATaGGTCCTATTGCTCAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQTQIITFLCTEASREAKSDKS*VLLLKQ Trigger: CTGTTTGAGCAATAGGACCAATGACTTATCAGATTT...GGCTTCTCTGCTTGCCTCAGTGCAAAGGAAAGTTATGATTTGGGTTTGAGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTAGAGACTCAACACACTTTCAGTTAGTGAGAGAAAAATCTGTTGAAGTGCCATACACAGCCTTATaGGAGGACAATGAAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESRDSTHFQLVREKSVEVPYTAL*EDNEAG Trigger: TCCTGCTTCATTGTCCTCCAATAAGGCTGTGTATGG...CACTTCAACAGATTTTTCTCTCACTAACTGAAAGTGTGTTGAGTCTCTACTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CAA 90 bp | AGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGTTTATTCCTTGTGTGTATCTATTaGTCCCCCATGGTGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGYLPCLFTFLSLSTCLFLVCIY*SPMVFW Trigger: CCAGAACACCATGGGGGACAAATAGATACACACAAG...GAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACATCCACGGAGAAGAATTGCTaGCTATCTTTTAAAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: FSVYHLVGCMHSNMKPTSTEKNC*LSFKAL Trigger: TAGAGCTTTAAAAGATAGCAAGCAATTCTTCTCCGT...GGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACATCCATTCTCAAGACATTTTaGCTTCAAGGTTCGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: FSVYHLVGCMHSNMKPTSILKTF*LQGSRM Trigger: CATTCTCGAACCTTGAAGCAAAAATGTCTTGAGAAT...GGATGTAGGCTTCATATTACTGTGCATACAGCCCACAAGATGATAAACTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGATATCTTCCTTGTCTGTTTACATTCCTGAGTCTGTCAACTTGTTTATTCACGGAGAAGAATTGCTaGCTATCTTTTAAAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RGYLPCLFTFLSLSTCLFTEKNC*LSFKAL Trigger: TAGAGCTTTAAAAGATAGCAAGCAATTCTTCTCCGT...GAATAAACAAGTTGACAGACTCAGGAATGTAAACAGACAAGGAAGATATCCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS TCA 72 bp | TCTTCTTGGAGGAGTGGCCGAGGACACTTTGAAACTTaGTGGGCTGCTGGGTCCCGGGCTGGCTCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSWRSGRGHFET*WAAGSRAGSFS Trigger: TGAGAAAGAGCCAGCCCGGGACCCAGCAGCCCATCAAGTTTCAAAGTGTCCTCGGCCACTCCTCCAAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS TCA 72 bp | GGGATGAATGGCCACTCTGCAGGAATACCATCTGTCTaGGGGACTCTAGGAGCTGGTGCTTGGGTTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GMNGHSAGIPSV*GTLGAGAWVGF Trigger: AAACCCAACCCAAGCACCAGCTCCTAGAGTCCCTCAGACAGATGGTATTCCTGCAGAGTGGCCATTCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 72 bp | CCAGTAGGATGCAACAGATTTCCTGTGCTCCTGAGCTaGTGGGCATCTTCAATGGAGGCTGATGTGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVGCNRFPVLLS*WASSMEADVEG Trigger: TCCCTCCACATCAGCCTCCATTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATCTGTTGCATCCTACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 72 bp | GCTAGTCGGCTGGGTGTAGTCAGTATTCCAGTAGGATaGAACAGATTTCCTGTGCTCCTGAGCTGCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASRLGVVSIPVG*NRFPVLLSCWA Trigger: TGCCCAGCAGCTCAGGAGCACAGGAAATCTGTTGCATCCTACTGGAATACTGACTACACCCAGCCGACTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 72 bp | GTAGGATGCAACAGATTTCCTGTGCTCCTGAGCTGCTaGGCATCTTCAATGGAGGCTGATGTGGAGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGCNRFPVLLSC*ASSMEADVEGR Trigger: CCTTCCCTCCACATCAGCCTCCATTGAAGATGCCCAGCAGCTCAGGAGCACAGGAAATCTGTTGCATCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 72 bp | GTGCCGGGTAGGGAATTTGGCTGGGTCGACTGTCTTTaGGTTGGAAATGTTGTAGATGGCCACGGAAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPGREFGWVDCL*VGNVVDGHGNL Trigger: AAGGTTTCCGTGGCCATCTACAACATTTCCAACCCAAAGACAGTCGACCCAGCCAAATTCCCTACCCGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 72 bp | ATCTGTCTGAGGGACTCTAGGAGCTGGTGCTTGGGTTaGGTTTGTAGTCTGTGTTCCAGGCATGAGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ICLRDSRSWCLG*VCSLCSRHECS Trigger: GGAACACTCATGCCTGGAACACAGACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTCCCTCAGACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 72 bp | CTGAAATCCCGCTTTTGGATTGCACAGAGGCATTGCTaGAAGAAGCGGCAGAGTTCCATCAGACATGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LKSRFWIAQRHC*KKRQSSIRHGV Trigger: CACCCCATGTCTGATGGAACTCTGCCGCTTCTTCCAGCAATGCCTCTGTGCAATCCAAAAGCGGGATTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 72 bp | TTGTCCCCCATGGTGTTCTGGTCATGTTACTTGAGCTaGGGGCACTACTGTGTGTGCCTATGGTCCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPMVFWSCYLS*GHYCVCLWSQQ Trigger: CTGTTGGGACCATAGGCACACACAGTAGTGCCCCAAGCTCAAGTAACATGACCAGAACACCATGGGGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 72 bp | AGGAATACCATCTGTCTGAGGGACTCTAGGAGCTGGTaGTTGGGTTGGGTTTGTAGTCTGTGTTCCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RNTICLRDSRSW*LGWVCSLCSRH Trigger: ATGCCTGGAACACAGACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTCCCTCAGACAGATGGTATTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 72 bp | GCTCTATTGAGCATGCCATTCACAAGCTCGGTCAGGTaGAGTGTAGACAGATCCACTGACCTTGCTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALLSMPFTSSVR*SVDRSTDLAGS Trigger: ACTCCCAGCAAGGTCAGTGGATCTGTCTACACTCAACCTGACCGAGCTTGTGAATGGCATGCTCAATAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 72 bp | AATACCATCTGTCTGAGGGACTCTAGGAGCTGGTGCTaGGGTTGGGTTTGTAGTCTGTGTTCCAGGCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: NTICLRDSRSWC*GWVCSLCSRHE Trigger: CTCATGCCTGGAACACAGACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTCCCTCAGACAGATGGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 72 bp | TGGTCATGTTACTTGAGCTTGGGGCACTACTGTGTGTaGCTATGGTCCCAACAGGAAGCTCTGGAAACATCT | + |
|
Preference number: 6 (lower is better) Translates to: WSCYLSLGHYCV*LWSQQEALETS Trigger: AGATGTTTCCAGAGCTTCCTGTTGGGACCATAGGCACACACAGTAGTGCCCCAAGCTCAAGTAACATGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 72 bp | GCTCAAACAGTAGCAGTGCCGGGTAGGGAATTTGGCTaGGTCGACTGTCTTTGGGTTGGAAATGTTGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AQTVAVPGREFG*VDCLWVGNVVD Trigger: ATCTACAACATTTCCAACCCAAAGACAGTCGACCCAGCCAAATTCCCTACCCGGCACTGCTACTGTTTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 72 bp | ATCTATTTGTCCCCCATGGTGTTCTGGTCATGTTACTaGAGCTTGGGGCACTACTGTGTGTGCCTATGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IYLSPMVFWSCY*SLGHYCVCLWS Trigger: GGACCATAGGCACACACAGTAGTGCCCCAAGCTCAAGTAACATGACCAGAACACCATGGGGGACAAATAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 90 bp | TCTGTTTGCTTTCTGCCAACTCTTTCTCTGAAGGAGCACTTGTCTTaGTCCAGGGGAGAGACTTCAGAGCAGATACCCATTGTGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVCFLPTLSLKEHLS*SRGETSEQIPIVCS Trigger: GGAGCACACAATGGGTATCTGCTCTGAAGTCTCTCCCCTGGACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCAGAAAGCAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 72 bp | TCCAGGGGAGAGACTTCAGAGCAGATACCCATTGTGTaGTCCAGCGTACAGAATATGGTCTTAGAAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: SRGETSEQIPIV*SSVQNMVLEVT Trigger: AGTCACTTCTAAGACCATATTCTGTACGCTGGAGCACACAATGGGTATCTGCTCTGAAGTCTCTCCCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 72 bp | GTGCTTGTGTGTATCTATTTGTCCCCCATGGTGTTCTaGTCATGTTACTTGAGCTTGGGGCACTACTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLVCIYLSPMVF*SCYLSLGHYCV Trigger: CACACAGTAGTGCCCCAAGCTCAAGTAACATGACCAGAACACCATGGGGGACAAATAGATACACACAAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CCA 72 bp | CAATTGCTTATGGCTTCTGAACTGAAATCCCGCTTTTaGATTGCACAGAGGCATTGCTGGAAGAAGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLLMASELKSRF*IAQRHCWKKRQ Trigger: CTGCCGCTTCTTCCAGCAATGCCTCTGTGCAATCCAAAAGCGGGATTTCAGTTCAGAAGCCATAAGCAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100584.3 |
||
| CDS CCA 72 bp | CAATACCTTATGGCTTCTGAACTGAAATCCCGCTTTTaGATTGCACAGAGGCATTGCTGGAAGAAGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QYLMASELKSRF*IAQRHCWKKRQ Trigger: CTGCCGCTTCTTCCAGCAATGCCTCTGTGCAATCCAAAAGCGGGATTTCAGTTCAGAAGCCATAAGGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS CAA 90 bp | CTGTGTGTGCCTATGGTCCCAACAGGAAGCTCTGGAAACATCTGTTaGCTTTCTGCCAACTCTTTCTCTGAAGGAGCACTTGTCTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LCVPMVPTGSSGNIC*LSANSFSEGALVFV Trigger: GACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAGAGCTTCCTGTTGGGACCATAGGCACACACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 72 bp | TTTCTGCCAACTCTTTCTCTGAAGGAGCACTTGTCTTaGTCCAGGGGAGAGACTTCAGAGCAGATACCCATT | + |
|
Preference number: 6 (lower is better) Translates to: FLPTLSLKEHLS*SRGETSEQIPI Trigger: AATGGGTATCTGCTCTGAAGTCTCTCCCCTGGACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 72 bp | CCTATGGTCCCAACAGGAAGCTCTGGAAACATCTGTTaGCTTTCTGCCAACTCTTTCTCTGAAGGAGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: PMVPTGSSGNIC*LSANSFSEGAL Trigger: AAGTGCTCCTTCAGAGAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCAGAGCTTCCTGTTGGGACCATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 90 bp | TCTTTTAAAGCTCTATTGAGCATGCCATTCACAAGCTCGGTCAGGTaGAGTGTAGACAGATCCACTGACCTTGCTGGGAGTTCTGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SFKALLSMPFTSSVR*SVDRSTDLAGSSVV Trigger: AACTACAGAACTCCCAGCAAGGTCAGTGGATCTGTCTACACTCAACCTGACCGAGCTTGTGAATGGCATGCTCAATAGAGCTTTAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS TCA 72 bp | TGGAAACATCTGTTTGCTTTCTGCCAACTCTTTCTCTaGAGGAGCACTTGTCTTTGTCCAGGGGAGAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: WKHLFAFCQLFL*RSTCLCPGERL Trigger: AAGTCTCTCCCCTGGACAAAGACAAGTGCTCCTTCAGAGAAAGAGTTGGCAGAAAGCAAACAGATGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS GCA 72 bp | TTTCTCCTTCTTGAGGCCTTCATTTCCAGACACTGTTaGAGGTGGGAGAGCCATTTCTTTATCTTTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FLLLEAFISRHC*RWESHFFIFLA Trigger: GGCAAGAAAGATAAAGAAATGGCTCTCCCACCTGCAACAGTGTCTGGAAATGAAGGCCTCAAGAAGGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS TCA 72 bp | TTCAAGGTTCGAGAATGGGACACCCTCTTCACCCTCTaGCAGATAAGTGTAGCATTCTTCAGAAACCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FKVREWDTLFTL*QISVAFFRNQE Trigger: TTCTTGGTTTCTGAAGAATGCTACACTTATCTGTCAGAGGGTGAAGAGGGTGTCCCATTCTCGAACCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239034.2 |
||
| CDS GCA 72 bp | TTTATCTTTCTTGCCTTCTCCTTTAAGACCAGACACTaGATTCCAGAGAAAGAGGATACAGGCAAGGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FIFLAFSFKTRH*IPEKEDTGKAH Trigger: ATGGGCCTTGCCTGTATCCTCTTTCTCTGGAATGCAGTGTCTGGTCTTAAAGGAGAAGGCAAGAAAGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||
| CDS CAA 90 bp | ATGCTAAGTACGGAGAAGAATTGCTTGCTATCTTTTAAAGCTCTATaGAGCATGCCATTCACAAGCTCGGTCAGGTTGAGTGTAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: MLSTEKNCLLSFKAL*SMPFTSSVRLSVDR Trigger: TCTGTCTACACTCAACCTGACCGAGCTTGTGAATGGCATGCTCAATAGAGCTTTAAAAGATAGCAAGCAATTCTTCTCCGTACTTAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100584.3 ENSMUST00000239034.2 |
||