Pregenerated sensors for HHIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064325Ensembl transcript IDs: ENSMUST00000079038.4
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | CCGGTTGCATGTGCTCTTTTGCCTCCAACGTGTCAATCATCCCAGTaGGCTTCCGGTGCTGCCCTTGCAGGTGCCTTCCCCTCTCTACAG | + |
Preference number: 1 (lower is better) Translates to: PVACALLPPTCQSSQ*ASGAALAGAFPSLQ Trigger: CTGTAGAGAGGGGAAGGCACCTGCAAGGGCAGCACCGGAAGCTCACTGGGATGATTGACACGTTGGAGGCAAAAGAGCACATGCAACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR GCA 90 bp | CTTGTAAACTCCTGGAGTCTAAAGCTGAGCCAAGCTGGAGCCGGTTaGATGTGCTCTTTTGCCTCCAACGTGTCAATCATCCCAGTGAGC | + |
Preference number: 1 (lower is better) Translates to: LVNSWSLKLSQAGAG*MCSFASNVSIIPVS Trigger: GCTCACTGGGATGATTGACACGTTGGAGGCAAAAGAGCACATGCAACCGGCTCCAGCTTGGCTCAGCTTTAGACTCCAGGAGTTTACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 90 bp | CAGCCTGGGTTGGCTGTGAAGGAGCAAGCTCTTCTCCAGGGAGGATaGATTAAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTG | + |
Preference number: 1 (lower is better) Translates to: QPGLAVKEQALLQGG*IKSTHCSLLIAQTL Trigger: CAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAGAGCTTGCTCCTTCACAGCCAACCCAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | GGAGGAAGAGGTGCGTGCACTGTCAGCCAGTGCTGCACACTTTTATaGTTCTACAGCTTGGATTCCAGAGGAATGAATGCTATGGTTGAG | + |
Preference number: 1 (lower is better) Translates to: GGRGACTVSQCCTLL*FYSLDSRGMNAMVE Trigger: CTCAACCATAGCATTCATTCCTCTGGAATCCAAGCTGTAGAATCATAAAAGTGTGCAGCACTGGCTGACAGTGCACGCACCTCTTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 90 bp | AGGCTACTGCATGACTCATTGCAAGATTTGTCAGTGTTGGGCCAGTaGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTA | + |
Preference number: 1 (lower is better) Translates to: RLLHDSLQDLSVLGQ*SVGKTRRDHLFSRV Trigger: TACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTGGCCCAACACTGACAAATCTTGCAATGAGTCATGCAGTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 90 bp | TACACACAGATGTACTTGAGGCCATCTGTACTACTTGTAAACTCCTaGAGTCTAAAGCTGAGCCAAGCTGGAGCCGGTTGCATGTGCTCT | + |
Preference number: 1 (lower is better) Translates to: YTQMYLRPSVLLVNS*SLKLSQAGAGCMCS Trigger: AGAGCACATGCAACCGGCTCCAGCTTGGCTCAGCTTTAGACTCCAGGAGTTTACAAGTAGTACAGATGGCCTCAAGTACATCTGTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | AGGAAGACAGGTAGAACTTGGCTAAGACCTGTATCTGACAGGCTCTaGGAACGTTTTCCACATGTAAACCCTTCCCTTCCTAGGCTTCCT | + |
Preference number: 1 (lower is better) Translates to: RKTGRTWLRPVSDRL*ERFPHVNPSLPRLP Trigger: AGGAAGCCTAGGAAGGGAAGGGTTTACATGTGGAAAACGTTCTCAGAGCCTGTCAGATACAGGTCTTAGCCAAGTTCTACCTGTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 90 bp | ACAGATGAAGGCTACTGCATGACTCATTGCAAGATTTGTCAGTGTTaGGCCAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTT | + |
Preference number: 1 (lower is better) Translates to: TDEGYCMTHCKICQC*ASGVLVRPEGTTSF Trigger: AAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTGGCCCAACACTGACAAATCTTGCAATGAGTCATGCAGTAGCCTTCATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 90 bp | ATCTGTACTACTTGTAAACTCCTGGAGTCTAAAGCTGAGCCAAGCTaGAGCCGGTTGCATGTGCTCTTTTGCCTCCAACGTGTCAATCAT | + |
Preference number: 1 (lower is better) Translates to: ICTTCKLLESKAEPS*SRLHVLFCLQRVNH Trigger: ATGATTGACACGTTGGAGGCAAAAGAGCACATGCAACCGGCTCCAGCTTGGCTCAGCTTTAGACTCCAGGAGTTTACAAGTAGTACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | TTGTTCCCTACGTACCAAGATTTCCCAACCCATGCCCATTTCATATaGGGTCACTGGAACCCAAGCAATCAAATATGGAAGACAGGAGCA | + |
Preference number: 1 (lower is better) Translates to: LFPTYQDFPTHAHFI*GHWNPSNQIWKTGA Trigger: TGCTCCTGTCTTCCATATTTGATTGCTTGGGTTCCAGTGACCTCATATGAAATGGGCATGGGTTGGGAAATCTTGGTACGTAGGGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | GTCAGAGAGCAAATGCATGTTTCAGTTATGGAAAGAGGAGATTTCTaGTGGGAATTTGTCAGTCCTCCCAGAAACAGGCCACCTGATTCC | + |
Preference number: 1 (lower is better) Translates to: VREQMHVSVMERGDF*WEFVSPPRNRPPDS Trigger: GGAATCAGGTGGCCTGTTTCTGGGAGGACTGACAAATTCCCATCAGAAATCTCCTCTTTCCATAACTGAAACATGCATTTGCTCTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | GAAGTCAGATTTGCCAAGAATGAAGATCATAAGAATCCATACATGTaGCCAGCTTATATACAGCCTGGGTTGGCTGTGAAGGAGCAAGCT | + |
Preference number: 1 (lower is better) Translates to: EVRFAKNEDHKNPYM*PAYIQPGLAVKEQA Trigger: AGCTTGCTCCTTCACAGCCAACCCAGGCTGTATATAAGCTGGTCACATGTATGGATTCTTATGATCTTCATTCTTGGCAAATCTGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | AGATTTCTGATGGGAATTTGTCAGTCCTCCCAGAAACAGGCCACCTaGTTCCTCAGGGAATATAGATGTGTTCATTTTCTGGGCATAGAA | + |
Preference number: 1 (lower is better) Translates to: RFLMGICQSSQKQAT*FLREYRCVHFLGIE Trigger: TTCTATGCCCAGAAAATGAACACATCTATATTCCCTGAGGAATCAGGTGGCCTGTTTCTGGGAGGACTGACAAATTCCCATCAGAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR GCA 90 bp | CAGAGAAGGGTAGGGTGTGGAGCCTTAGGTAATATTCTAGACAGATaGTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATA | + |
Preference number: 1 (lower is better) Translates to: QRRVGCGALGNILDR*SDNKLMYHSQTLLI Trigger: TATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCTGTCTAGAATATTACCTAAGGCTCCACACCCTACCCTTCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | CATGTTGGCACAAGTACACATTGCTACATTAGATCCACAGCACATTaGAGGCTGTTTGCTTCCTTACTCCCCTTCTTTCCAATTAAGTTG | + |
Preference number: 1 (lower is better) Translates to: HVGTSTHCYIRSTAH*RLFASLLPFFPIKL Trigger: CAACTTAATTGGAAAGAAGGGGAGTAAGGAAGCAAACAGCCTTCAATGTGCTGTGGATCTAATGTAGCAATGTGTACTTGTGCCAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 90 bp | TGCACATATGACAGAGAGTCAGAGAGCAAATGCATGTTTCAGTTATaGAAAGAGGAGATTTCTGATGGGAATTTGTCAGTCCTCCCAGAA | + |
Preference number: 1 (lower is better) Translates to: CTYDRESESKCMFQL*KEEISDGNLSVLPE Trigger: TTCTGGGAGGACTGACAAATTCCCATCAGAAATCTCCTCTTTCCATAACTGAAACATGCATTTGCTCTCTGACTCTCTGTCATATGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | AGCTGGTTTCATGAGAAGTTCACAGTCTATCAATGTCACCCACACTaGATAAGGGATGATTTGATAGTAAGGCCCACTCACAAAAATGGT | + |
Preference number: 1 (lower is better) Translates to: SWFHEKFTVYQCHPH*IRDDLIVRPTHKNG Trigger: ACCATTTTTGTGAGTGGGCCTTACTATCAAATCATCCCTTATTCAGTGTGGGTGACATTGATAGACTGTGAACTTCTCATGAAACCAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | GAAGGCTGTTTGCTTCCTTACTCCCCTTCTTTCCAATTAAGTTGGTaGAAACGTAACTTTAGTATTTTACAGGACAGGGTAAAGGTGTCT | + |
Preference number: 1 (lower is better) Translates to: EGCLLPYSPSFQLSW*KRNFSILQDRVKVS Trigger: AGACACCTTTACCCTGTCCTGTAAAATACTAAAGTTACGTTTTCACCAACTTAATTGGAAAGAAGGGGAGTAAGGAAGCAAACAGCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR GCA 90 bp | TCTGGATCTGGTCATCTTAGCCAAGGTTATTTGCAGAAGAGCGTCTaGCAATGGAGCATCTTCTCTTTTAAAGTTATAAAAAGAAGCTCT | + |
Preference number: 1 (lower is better) Translates to: SGSGHLSQGYLQKSV*QWSIFSFKVIKRSS Trigger: AGAGCTTCTTTTTATAACTTTAAAAGAGAAGATGCTCCATTGGCAGACGCTCTTCTGCAAATAACCTTGGCTAAGATGACCAGATCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | AGAGGGCAATTTGGTCTCCATGCTCATTTAGTCCCAAGACTTCTCTaGATAGACTGTCAATTGAATCTAAATTGTGCAAAATTATGCAAG | + |
Preference number: 1 (lower is better) Translates to: RGQFGLHAHLVPRLL*IDCQLNLNCAKLCK Trigger: CTTGCATAATTTTGCACAATTTAGATTCAATTGACAGTCTATTCAGAGAAGTCTTGGGACTAAATGAGCATGGAGACCAAATTGCCCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | CACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGTaGAAGCACTTTACATGCATGAAATGCTGGAATTTTATAAGAACT | + |
Preference number: 1 (lower is better) Translates to: HCSLLIAQTLIFLLW*KHFTCMKCWNFIRT Trigger: AGTTCTTATAAAATTCCAGCATTTCATGCATGTAAAGTGCTTTCACCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 90 bp | TCTGGGCTCTTCCTTCTGCCTCTTATTAGTGTATTAACAGAAACCTaGGGATGGATTGTTTCTGAATCTTATAAGATTCTCATAATCTTG | + |
Preference number: 1 (lower is better) Translates to: SGLFLLPLISVLTET*GWIVSESYKILIIL Trigger: CAAGATTATGAGAATCTTATAAGATTCAGAAACAATCCATCCTCAGGTTTCTGTTAATACACTAATAAGAGGCAGAAGGAAGAGCCCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR GCA 90 bp | AACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTaGACATATGACAGAGAGTCAGAGAGCAAATGCATGTTTCAGTTA | + |
Preference number: 1 (lower is better) Translates to: NLFYAILVIRYVASL*TYDRESESKCMFQL Trigger: TAACTGAAACATGCATTTGCTCTCTGACTCTCTGTCATATGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 90 bp | CTGGCGCAGACCATACCAAGCCTAATCATACCTTATTCATATGAATaGAAACTACTGACTAGTTATTTTTCAGTACAGAAAGAAATGTTC | + |
Preference number: 1 (lower is better) Translates to: LAQTIPSLIIPYSYE*KLLTSYFSVQKEMF Trigger: GAACATTTCTTTCTGTACTGAAAAATAACTAGTCAGTAGTTTCCATTCATATGAATAAGGTATGATTAGGCTTGGTATGGTCTGCGCCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 90 bp | ACTTGTAAACTCCTGGAGTCTAAAGCTGAGCCAAGCTGGAGCCGGTaGCATGTGCTCTTTTGCCTCCAACGTGTCAATCATCCCAGTGAG | + |
Preference number: 2 (lower is better) Translates to: TCKLLESKAEPSWSR*HVLFCLQRVNHPSE Trigger: CTCACTGGGATGATTGACACGTTGGAGGCAAAAGAGCACATGCAACCGGCTCCAGCTTGGCTCAGCTTTAGACTCCAGGAGTTTACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGGGAGGAAGAGGTGCGTaGACTGTCAGCCAGTGCTGC | + |
Preference number: 2 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVGGRGA*TVSQCC Trigger: GCAGCACTGGCTGACAGTGCACGCACCTCTTCCTCC...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | CAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTAAGAGGGCTTCTCCAGGGAGGATaGATTAAGAGCACACACTGT | + |
Preference number: 2 (lower is better) Translates to: QWSVGKTRRDHLFSRVRGLLQGG*IKSTHC Trigger: ACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAG...CCCTCTTACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR TCA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGGGAGACCACTGTTGTTaGGCCATATTCCTGAGGAGG | + |
Preference number: 2 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVGDHCC*AIFLRR Trigger: CCTCCTCAGGAATATGGCTCAACAACAGTGGTCTCC...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR TCA 90 bp | CAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTAAGAGGGGTCCCAAGACTTCTCTaGATAGACTGTCAATTGAAT | + |
Preference number: 2 (lower is better) Translates to: QWSVGKTRRDHLFSRVRGVPRLL*IDCQLN Trigger: ATTCAATTGACAGTCTATTCAGAGAAGTCTTGGGAC...CCCTCTTACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR TCA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATAGTTGAGCCATATTCCTaGGGAGGAAGAGGTGCGTGC | + |
Preference number: 2 (lower is better) Translates to: SFSGHRTLVVFSESTDHIVEPYS*GGRGAC Trigger: GCACGCACCTCTTCCTCCTCAGGAATATGGCTCAAC...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACACTGAGGAGGAAGAGGTaGGTGCACTGTCAGCCAGTG | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTLRRKR*VHCQPV Trigger: CACTGGCTGACAGTGCACGCACCTCTTCCTCCTCAG...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 90 bp | GTCAAGCTCTCTACTAGGGCAACTGTCCTAATCTTTCCTGTAACTTaGCTGGAAGACCAGAATGAAGCACCTATGCTAGCAGATGTGTAT | + |
Preference number: 2 (lower is better) Translates to: VKLSTRATVLIFPVT*LEDQNEAPMLADVY Trigger: ATACACATCTGCTAGCATAGGTGCTTCATTCTGGTCTTCCAGCAAAGTTACAGGAAAGATTAGGACAGTTGCCCTAGTAGAGAGCTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAAACACAGGTAGGAAGGTaGTTTCTACTCAGCTGGTAC | + |
Preference number: 2 (lower is better) Translates to: NRENVSEATITKGLIFFQTQVGR*FLLSWY Trigger: GTACCAGCTGAGTAGAAACCACCTTCCTACCTGTGT...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 90 bp | ACTGGCTGCTTTCTTGCTTTTTCATCTGATGGGAGTGACTACATGTaGGCACAAGTACACATTGCTACATTAGATCCACAGCACATTGAA | + |
Preference number: 2 (lower is better) Translates to: TGCFLAFSSDGSDYM*AQVHIATLDPQHIE Trigger: TTCAATGTGCTGTGGATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGAAAAAGCAAGAAAGCAGCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR TCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGGTGTGTATGCAGATGTaGAGAAATGTGCCAACATAC | + |
Preference number: 2 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWVCMQM*RNVPTY Trigger: GTATGTTGGCACATTTCTTCACATCTGCATACACAC...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | CTTCTCCAGGGAGGATGGATTAAGAGCACACACTGTAGCCTTTTAATCGCACAGAGGAGTTTGGAAACATaGTCTCTTATTATAGACCTT | + |
Preference number: 2 (lower is better) Translates to: LLQGGWIKSTHCSLLIAQRSLET*SLIIDL Trigger: AAGGTCTATAATAAGAGAGCATGTTTCCAAACTCCT...CTGTGCGATTAAAAGGCTACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAAGGAAGACAGGAGCAGTaGACCCAACAAATATTCTAC | + |
Preference number: 2 (lower is better) Translates to: NRENVSEATITKGLIFFQGRQEQ*TQQIFY Trigger: GTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCC...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | TCATCTGATGGGAGTGACTACATGTTGGCACAAGTACACATTGCTACATTAGATACATTGAAGGCTGTTTaGTTCCTTACTCCCCTTCTT | + |
Preference number: 2 (lower is better) Translates to: SSDGSDYMLAQVHIATLDTLKAV*FLTPLL Trigger: AAGAAGGGGAGTAAGGAAGCAAACAGCCTTCAATGT...ATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACAAGCTTATATACAGCCTaGGTTGGCTGTGAAGGAGCA | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTSLYTA*VGCEGA Trigger: TGCTCCTTCACAGCCAACCCAGGCTGTATATAAGCT...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCCCAAGCAATCAAATATaGAAGACAGGAGCAGTGGAC | + |
Preference number: 2 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFPSNQI*KTGAVD Trigger: GTCCACTGCTCCTGTCTTCCATATTTGATTGCTTGG...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR TCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACATGGATTCCAGAGGAATaGATGCTATGGTTGAGAGTG | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTWIPEE*MLWLRV Trigger: CACTCTCAACCATAGCATTCATTCCTCTGGAATCCA...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | AGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGAGTTTGGAGGTTGTGCGTGTGTATaGAGATGTGAAGAAATGTGC | + |
Preference number: 2 (lower is better) Translates to: RLQSYIKLLVQKFTKEFGGCACV*RCEEMC Trigger: GCACATTTCTTCACATCTGCATACACACGCACAACC...TCCAAACTCCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAAGATCATTGCTTTATGTaGTTTGAAACAGGCCAGAAC | + |
Preference number: 2 (lower is better) Translates to: NRENVSEATITKGLIFFQDHCFM*FETGQN Trigger: GTTCTGGCCTGTTTCAAAGCACATAAAGCAATGATC...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTaGTGCACATATGACAGAGAGTCAGAGAGCAAATGCATGTTTCAG | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVAS*CTYDRESESKCMFQ Trigger: CTGAAACATGCATTTGCTCTCTGACTCTCTGTCATATGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGATTCACCAAGGAGTTTaGAAACATGCTCTCTTATTA | + |
Preference number: 2 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVIHQGV*KHALLL Trigger: TAATAAGAGAGCATGTTTCCAAACTCCTTGGTGAAT...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR TCA 90 bp | CACAAAATATACAATAGAAGCAGCACATTCATGAAGACTGCTCTTTCAAATAGGTGCCAACATACATGCTaGGAGCTGTACATTTCTGAT | + |
Preference number: 2 (lower is better) Translates to: HKIYNRSSTFMKTALSNRCQHTC*ELYISD Trigger: ATCAGAAATGTACAGCTCTCAGCATGTATGTTGGCA...CCTATTTGAAAGAGCAGTCTTCATGAATGTGCTGCTTCTATTGTATATTTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR TCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACAGTAGAAACTTCTGAGTaGAGCTTAGGAAGTGTTTTC | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTVETSE*SLGSVF Trigger: GAAAACACTTCCTAAGCTTCACTCAGAAGTTTCTAC...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAAAATCTTACATCAAGCTaGTTGTTCAGAAATTCACCA | + |
Preference number: 2 (lower is better) Translates to: NRENVSEATITKGLIFFQNLTSS*LFRNSP Trigger: TGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATT...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACATACTGCATGACTCATTaGAAGATTTGTCAGTGTTGG | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTYCMTH*KICQCW Trigger: CCAACACTGACAAATCTTGCAATGAGTCATGCAGTA...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCTGCCAATTTAGCTCTTaGATCATTGCTTTATGTGCT | + |
Preference number: 2 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFCQFSS*IIALCA Trigger: AGCACATAAAGCAATGATCCAAGAGCTAAATTGGCA...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 90 bp | GAAATTTGGAATTGGTCACATAGTCACACCATCATCTACCAGTTATaGCTATCTACTTTTCTCCTAAGGATGGAAAGAAAGGATTCTAGT | + |
Preference number: 2 (lower is better) Translates to: EIWNWSHSHTIIYQL*LSTFLLRMERKDSS Trigger: ACTAGAATCCTTTCTTTCCATCCTTAGGAGAAAAGTAGATAGCAATAACTGGTAGATGATGGTGTGACTATGTGACCAATTCCAAATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR GCA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCTCTAGTGATTTTCTTTaGTTGGGTTACATATCCATG | + |
Preference number: 2 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFSSDFL*LGYISM Trigger: CATGGATATGTAACCCAAGCAAAGAAAATCACTAGA...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACAAAAATAAATGCCCACTaGAAAGATAGACTCGAACTG | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTKINAH*KDRLEL Trigger: CAGTTCGAGTCTATCTTTCCAGTGGGCATTTATTTT...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACAGGTCAAAGAGAAATTTaGAATTGGTCACATAGTCAC | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTGQREI*NWSHSH Trigger: GTGACTATGTGACCAATTCCAAATTTCTCTTTGACC...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACATGGAGAGATGGCAAATaGAAAACCATCAAGAAAAAT | + |
Preference number: 2 (lower is better) Translates to: PNLFYAILVIRYVASLCTWRDGK*KTIKKN Trigger: ATTTTTCTTGATGGTTTTCCATTTGCCATCTCTCCA...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR GCA 72 bp | GCCTCCAACGTGTCAATCATCCCAGTGAGCTTCCGGTaGTGCCCTTGCAGGTGCCTTCCCCTCTCTACAGCG | + |
Preference number: 3 (lower is better) Translates to: ASNVSIIPVSFR*CPCRCLPLSTA Trigger: CGCTGTAGAGAGGGGAAGGCACCTGCAAGGGCAGCACCGGAAGCTCACTGGGATGATTGACACGTTGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | CCTAGCTGGGAGACCACTGTTGTTGAGCCATATTCCTaGGGAGGAAGAGGTGCGTGCACTGTCAGCCAGTGC | + |
Preference number: 3 (lower is better) Translates to: PSWETTVVEPYS*GGRGACTVSQC Trigger: GCACTGGCTGACAGTGCACGCACCTCTTCCTCCTCAGGAATATGGCTCAACAACAGTGGTCTCCCAGCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | TGCTGCCCTTGCAGGTGCCTTCCCCTCTCTACAGCGTaGAGTCATGCGAGGCACTTCAGCATTTATATTGCG | + |
Preference number: 3 (lower is better) Translates to: CCPCRCLPLSTA*SHARHFSIYIA Trigger: CGCAATATAAATGCTGAAGTGCCTCGCATGACTTCACGCTGTAGAGAGGGGAAGGCACCTGCAAGGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | ACTTGTAAACTCCTGGAGTCTAAAGCTGAGCCAAGCTaGAGCCGGTTGCATGTGCTCTTTTGCCTCCAACGT | + |
Preference number: 3 (lower is better) Translates to: TCKLLESKAEPS*SRLHVLFCLQR Trigger: ACGTTGGAGGCAAAAGAGCACATGCAACCGGCTCCAGCTTGGCTCAGCTTTAGACTCCAGGAGTTTACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | ACAGGCCAGAACTTTGCACCAACACAGGTAGGAAGGTaGTTTCTACTCAGCTGGTACCCAAAGCCTAAAGTC | + |
Preference number: 3 (lower is better) Translates to: TGQNFAPTQVGR*FLLSWYPKPKV Trigger: GACTTTAGGCTTTGGGTACCAGCTGAGTAGAAACCACCTTCCTACCTGTGTTGGTGCAAAGTTCTGGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | ATGTACTTGAGGCCATCTGTACTACTTGTAAACTCCTaGAGTCTAAAGCTGAGCCAAGCTGGAGCCGGTTGC | + |
Preference number: 3 (lower is better) Translates to: MYLRPSVLLVNS*SLKLSQAGAGC Trigger: GCAACCGGCTCCAGCTTGGCTCAGCTTTAGACTCCAGGAGTTTACAAGTAGTACAGATGGCCTCAAGTACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | GGTGCGTGCACTGTCAGCCAGTGCTGCACACTTTTATaGTTCTACAGCTTGGATTCCAGAGGAATGAATGCT | + |
Preference number: 3 (lower is better) Translates to: GACTVSQCCTLL*FYSLDSRGMNA Trigger: AGCATTCATTCCTCTGGAATCCAAGCTGTAGAATCATAAAAGTGTGCAGCACTGGCTGACAGTGCACGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | TTGGCTGTGAAGGAGCAAGCTCTTCTCCAGGGAGGATaGATTAAGAGCACACACTGTAGCCTTTTAATCGCA | + |
Preference number: 3 (lower is better) Translates to: LAVKEQALLQGG*IKSTHCSLLIA Trigger: TGCGATTAAAAGGCTACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAGAGCTTGCTCCTTCACAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | CATGACTCATTGCAAGATTTGTCAGTGTTGGGCCAGTaGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTT | + |
Preference number: 3 (lower is better) Translates to: HDSLQDLSVLGQ*SVGKTRRDHLF Trigger: AAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTGGCCCAACACTGACAAATCTTGCAATGAGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CAA 90 bp | TACATGTTGGCACAAGTACACATTGCTACATTAGATCCACAGCACATTGAAGGCACCTCGAGTTTGGGGTaGTGCGTGTGTATGCAGATG | + |
Preference number: 3 (lower is better) Translates to: YMLAQVHIATLDPQHIEGTSSLG*CVCMQM Trigger: CATCTGCATACACACGCACAACCCCAAACTCGAGGT...GCCTTCAATGTGCTGTGGATCTAATGTAGCAATGTGTACTTGTGCCAACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CAA 90 bp | CTTCTCCAGGGAGGATGGATTAAGAGCACACACTGTAGCCTTTTAATCGCACAGGAACTGGCTGCTTTCTaGCTTTTTCATCTGATGGGA | + |
Preference number: 3 (lower is better) Translates to: LLQGGWIKSTHCSLLIAQELAAF*LFHLMG Trigger: TCCCATCAGATGAAAAAGCAAGAAAGCAGCCAGTTC...CTGTGCGATTAAAAGGCTACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CAA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGGCTGGGAGACCACTGTaGTTGAGCCATATTCCTGAG | + |
Preference number: 3 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVAGRPL*LSHIPE Trigger: CTCAGGAATATGGCTCAACAACAGTGGTCTCCCAGC...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | GCCAATTTAGCTCTTGGATCATTGCTTTATGTGCTTTaGAACAGGCCAGAACTTTGCACCAACACAGGTAGG | + |
Preference number: 3 (lower is better) Translates to: ANLALGSLLYVL*NRPELCTNTGR Trigger: CCTACCTGTGTTGGTGCAAAGTTCTGGCCTGTTTCAAAGCACATAAAGCAATGATCCAAGAGCTAAATTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | ATGGGAATTTGTCAGTCCTCCCAGAAACAGGCCACCTaGTTCCTCAGGGAATATAGATGTGTTCATTTTCTG | + |
Preference number: 3 (lower is better) Translates to: MGICQSSQKQAT*FLREYRCVHFL Trigger: CAGAAAATGAACACATCTATATTCCCTGAGGAATCAGGTGGCCTGTTTCTGGGAGGACTGACAAATTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | ACAAGTACACATTGCTACATTAGATCCACAGCACATTaGAGGCTGTTTGCTTCCTTACTCCCCTTCTTTCCA | + |
Preference number: 3 (lower is better) Translates to: TSTHCYIRSTAH*RLFASLLPFFP Trigger: TGGAAAGAAGGGGAGTAAGGAAGCAAACAGCCTTCAATGTGCTGTGGATCTAATGTAGCAATGTGTACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | CAAAAGACTATTAACCTACAGATGAAGGCTACTGCATaGCTCATTGCAAGATTTGTCAGTGTTGGGCCAGTG | + |
Preference number: 3 (lower is better) Translates to: QKTINLQMKATA*LIARFVSVGPV Trigger: CACTGGCCCAACACTGACAAATCTTGCAATGAGTCATGCAGTAGCCTTCATCTGTAGGTTAATAGTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CAA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGAAGAACCAAAGGGTATaGTCACAGAGACCTAAAGGA | + |
Preference number: 3 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVKNQRV*SQRPKG Trigger: TCCTTTAGGTCTCTGTGACAATACCCTTTGGTTCTT...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | TTTGCCAAGAATGAAGATCATAAGAATCCATACATGTaGCCAGCTTATATACAGCCTGGGTTGGCTGTGAAG | + |
Preference number: 3 (lower is better) Translates to: FAKNEDHKNPYM*PAYIQPGLAVK Trigger: CTTCACAGCCAACCCAGGCTGTATATAAGCTGGTCACATGTATGGATTCTTATGATCTTCATTCTTGGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | CACAGTCTATCAATGTCACCCACACTGAATAAGGGATaGTTTGATAGTAAGGCCCACTCACAAAAATGGTTG | + |
Preference number: 3 (lower is better) Translates to: HSLSMSPTLNKG*FDSKAHSQKWL Trigger: CAACCATTTTTGTGAGTGGGCCTTACTATCAAATCATCCCTTATTCAGTGTGGGTGACATTGATAGACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | ACGTGCCAAGAGACAACAGAGAAACACATAAGATCTTaGATTAGCGTGTACTTTGAAAGACCTCAGGTTCAG | + |
Preference number: 3 (lower is better) Translates to: TCQETTEKHIRS*ISVYFERPQVQ Trigger: CTGAACCTGAGGTCTTTCAAAGTACACGCTAATTCAAGATCTTATGTGTTTCTCTGTTGTCTCTTGGCACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | GACAGAGAGTCAGAGAGCAAATGCATGTTTCAGTTATaGAAAGAGGAGATTTCTGATGGGAATTTGTCAGTC | + |
Preference number: 3 (lower is better) Translates to: DRESESKCMFQL*KEEISDGNLSV Trigger: GACTGACAAATTCCCATCAGAAATCTCCTCTTTCCATAACTGAAACATGCATTTGCTCTCTGACTCTCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | TGCAAGGAATCTATTACTTGCTTGCATCTTTCCAACTaGCTGGTACATGCCCTAATACATTCTATGGCAAAG | + |
Preference number: 3 (lower is better) Translates to: CKESITCLHLSN*LVHALIHSMAK Trigger: CTTTGCCATAGAATGTATTAGGGCATGTACCAGCCAGTTGGAAAGATGCAAGCAAGTAATAGATTCCTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | CACTTTTATGATTCTACAGCTTGGATTCCAGAGGAATaGATGCTATGGTTGAGAGTGTGCACTTATCATGGT | + |
Preference number: 3 (lower is better) Translates to: HFYDSTAWIPEE*MLWLRVCTYHG Trigger: ACCATGATAAGTGCACACTCTCAACCATAGCATTCATTCCTCTGGAATCCAAGCTGTAGAATCATAAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR GCA 72 bp | GTGCAAACTCAAGAAGGTCCTGTGAGCCAGTACCTATaGATATTAATTTCTGGAGACAGTCTAGAAATTGTA | + |
Preference number: 3 (lower is better) Translates to: VQTQEGPVSQYL*ILISGDSLEIV Trigger: TACAATTTCTAGACTGTCTCCAGAAATTAATATGCATAGGTACTGGCTCACAGGACCTTCTTGAGTTTGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | AGGTCCTGTGAGCCAGTACCTATGCATATTAATTTCTaGAGACAGTCTAGAAATTGTAACAGTTCCTATGCT | + |
Preference number: 3 (lower is better) Translates to: RSCEPVPMHINF*RQSRNCNSSYA Trigger: AGCATAGGAACTGTTACAATTTCTAGACTGTCTCCAGAAATTAATATGCATAGGTACTGGCTCACAGGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR GCA 72 bp | TATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTaGACATATGACAGAGAGTCAGAGAGCAAATGCATG | + |
Preference number: 3 (lower is better) Translates to: YAILVIRYVASL*TYDRESESKCM Trigger: CATGCATTTGCTCTCTGACTCTCTGTCATATGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR-3UTR CAA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCCTTGTAGAAAATTTATaGAGGCAAGAACCAAAGGGT | + |
Preference number: 3 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFLVENL*RQEPKG Trigger: ACCCTTTGGTTCTTGCCTCAATAAATTTTCTACAAG...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | GGATGGAAAGAAAGGATTCTAGTGATTTTCTTTGCTTaGGTTACATATCCATGGGTCACAGTCTTTAAAGAT | + |
Preference number: 3 (lower is better) Translates to: GWKERILVIFFA*VTYPWVTVFKD Trigger: ATCTTTAAAGACTGTGACCCATGGATATGTAACCCAAGCAAAGAAAATCACTAGAATCCTTTCTTTCCATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | CTCTTTTACATCTTAATGAGATGCCAATTTAGCTCTTaGATCATTGCTTTATGTGCTTTGAAACAGGCCAGA | + |
Preference number: 3 (lower is better) Translates to: LFYILMRCQFSS*IIALCALKQAR Trigger: TCTGGCCTGTTTCAAAGCACATAAAGCAATGATCCAAGAGCTAAATTGGCATCTCATTAAGATGTAAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | CTTTTAATCGCACAGACTCTGATATTCTTGCTATGGTaGAAGCACTTTACATGCATGAAATGCTGGAATTTT | + |
Preference number: 3 (lower is better) Translates to: LLIAQTLIFLLW*KHFTCMKCWNF Trigger: AAAATTCCAGCATTTCATGCATGTAAAGTGCTTTCACCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | TTTGGTCTCCATGCTCATTTAGTCCCAAGACTTCTCTaGATAGACTGTCAATTGAATCTAAATTGTGCAAAA | + |
Preference number: 3 (lower is better) Translates to: FGLHAHLVPRLL*IDCQLNLNCAK Trigger: TTTTGCACAATTTAGATTCAATTGACAGTCTATTCAGAGAAGTCTTGGGACTAAATGAGCATGGAGACCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CCA 72 bp | TGTCATTTCTTTAAGAGTTACTCTAGGAGTGCAGCCTaGAAAGCTATTTCTCTACTTTTCTTAGTGATACTA | + |
Preference number: 3 (lower is better) Translates to: CHFFKSYSRSAA*KAISLLFLVIL Trigger: TAGTATCACTAAGAAAAGTAGAGAAATAGCTTTCCAGGCTGCACTCCTAGAGTAACTCTTAAAGAAATGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR TCA 72 bp | AACCATCAAGAAAAATGTCTGTCAGACTCTTGCAATTaGAAGCTAGGGCACATCATTTCTTTAAGAAAATCT | + |
Preference number: 3 (lower is better) Translates to: NHQEKCLSDSCN*KLGHIISLRKS Trigger: AGATTTTCTTAAAGAAATGATGTGCCCTAGCTTTCAATTGCAAGAGTCTGACAGACATTTTTCTTGATGGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | CAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTAAGAGGGCAAGGATACCTGCCCTaGTCACTCTGCGGACGTTCC | + |
Preference number: 4 (lower is better) Translates to: QWSVGKTRRDHLFSRVRGQGYLP*SLCGRS Trigger: GGAACGTCCGCAGAGTGACCAGGGCAGGTATCCTTG...CCCTCTTACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | GACCATAGAGGGATCCTAGCTGGGAGACCACTGTTGTaGAGCCATATTCCTGAGGAGGAAGAGGTGCGTGCA | + |
Preference number: 4 (lower is better) Translates to: DHRGILAGRPLL*SHIPEEEEVRA Trigger: TGCACGCACCTCTTCCTCCTCAGGAATATGGCTCAACAACAGTGGTCTCCCAGCTAGGATCCCTCTATGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | CTCCTGGAGTCTAAAGCTGAGCCAAGCTGGAGCCGGTaGCATGTGCTCTTTTGCCTCCAACGTGTCAATCAT | + |
Preference number: 4 (lower is better) Translates to: LLESKAEPSWSR*HVLFCLQRVNH Trigger: ATGATTGACACGTTGGAGGCAAAAGAGCACATGCAACCGGCTCCAGCTTGGCTCAGCTTTAGACTCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | TACATGTTGGCACAAGTACACATTGCTACATTAGATCCACAGCACATTGAAGGCGCCGCAGCCCACTCATaGCCTCCTGGACACAGAGGC | + |
Preference number: 4 (lower is better) Translates to: YMLAQVHIATLDPQHIEGAAAHS*PPGHRG Trigger: GCCTCTGTGTCCAGGAGGTCATGAGTGGGCTGCGGC...GCCTTCAATGTGCTGTGGATCTAATGTAGCAATGTGTACTTGTGCCAACATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | CAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTAAGAGGGGCAGCAAGATACTCGTaGGTAGAAGCCACCACACAG | + |
Preference number: 4 (lower is better) Translates to: QWSVGKTRRDHLFSRVRGAARYS*VEATTQ Trigger: CTGTGTGGTGGCTTCTACCCACGAGTATCTTGCTGC...CCCTCTTACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | CAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTAAGAGGGCCAAGATGCTTTCGGTaGAGCTCTGCGACTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: QWSVGKTRRDHLFSRVRGPRCFR*SSATSR Trigger: TCTGGAAGTCGCAGAGCTCCACCGAAAGCATCTTGG...CCCTCTTACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGCTCGACAGGAGCTGCTaGCACCCAGGCAGAGCGGCT | + |
Preference number: 4 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWLDRSC*HPGRAA Trigger: AGCCGCTCTGCCTGGGTGCCAGCAGCTCCTGTCGAG...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | TCATCTGATGGGAGTGACTACATGTTGGCACAAGTACACATTGCTACATTAGATCCTCCCAGCCGGGACTaGAGCAGCACTTGCCAGTGG | + |
Preference number: 4 (lower is better) Translates to: SSDGSDYMLAQVHIATLDPPSRD*SSTCQW Trigger: CCACTGGCAAGTGCTGCTGCAGTCCCGGCTGGGAGG...ATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGACACAGACACCTCCATaGCGGCACGCTGGCTCACAC | + |
Preference number: 4 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWTQTPP*RHAGSH Trigger: GTGTGAGCCAGCGTGCCGTCATGGAGGTGTCTGTGT...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | CTTCTCCAGGGAGGATGGATTAAGAGCACACACTGTAGCCTTTTAATCGCACAGCCACTCATGACCTCCTaGACACAGAGGCAGTTGTGT | + |
Preference number: 4 (lower is better) Translates to: LLQGGWIKSTHCSLLIAQPLMTS*TQRQLC Trigger: ACACAACTGCCTCTGTGTCCAGGAGGTCATGAGTGG...CTGTGCGATTAAAAGGCTACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | CATTGCAAGATTTGTCAGTGTTGGGCCAGTGGAGTGTaGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGG | + |
Preference number: 4 (lower is better) Translates to: HCKICQCWASGV*VRPEGTTSFLG Trigger: CCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTGGCCCAACACTGACAAATCTTGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | AGGCTACTGCATGACTCATTGCAAGATTTGTCAGTGTaGGGCCAGTGGAGTGTTGGTAAGACCAGAAGGGAC | + |
Preference number: 4 (lower is better) Translates to: RLLHDSLQDLSV*GQWSVGKTRRD Trigger: GTCCCTTCTGGTCTTACCAACACTCCACTGGCCCAACACTGACAAATCTTGCAATGAGTCATGCAGTAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | TCATCTGATGGGAGTGACTACATGTTGGCACAAGTACACATTGCTACATTAGATGGATCTCTCCTCCACTaGGCAGCTCCAGCTGGGACA | + |
Preference number: 4 (lower is better) Translates to: SSDGSDYMLAQVHIATLDGSLLH*AAPAGT Trigger: TGTCCCAGCTGGAGCTGCTCAGTGGAGGAGAGATCC...ATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAACGAAGAATGTGGTCGTaGGGCCCAATAGCCCACCGT | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQRRMWS*GPIAHR Trigger: ACGGTGGGCTATTGGGCCTCACGACCACATTCTTCG...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGGCTGGTTGGTGCTGTTaGAGTGAGGGTTACTCCGAG | + |
Preference number: 4 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWAGWCC*SEGYSE Trigger: CTCGGAGTAACCCTCACTTCAACAGCACCAACCAGC...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGGGGCAGGTTGAACTGTaGCTCTGCATTCCTCAGGCA | + |
Preference number: 4 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWGQVEL*LCIPQA Trigger: TGCCTGAGGAATGCAGAGTCACAGTTCAACCTGCCC...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGGGCACTTGTTCGGTCTaGCACAGACACCTCCATGAC | + |
Preference number: 4 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVGTCSV*HRHLHD Trigger: GTCATGGAGGTGTCTGTGTCAGACCGAACAAGTGCC...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGCCTCCAGCAGCCTGCTaGATTCTGAGTTGTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVPPAAC*ILSCWW Trigger: CCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGG...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | CTTCTCCAGGGAGGATGGATTAAGAGCACACACTGTAGCCTTTTAATCGCACAGGCCCAAGTAGTTAGATaGTGGTCCTCTGACTTGCTT | + |
Preference number: 4 (lower is better) Translates to: LLQGGWIKSTHCSLLIAQAQVVR*WSSDLL Trigger: AAGCAAGTCAGAGGACCAGCATCTAACTACTTGGGC...CTGTGCGATTAAAAGGCTACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | AGAAATGAAGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGAGCCTCGACAGGAGCTaGTGGCACCCAGGCAGAGCG | + |
Preference number: 4 (lower is better) Translates to: RNEDYNLTSSCLFRNSPRSLDRS*WHPGRA Trigger: CGCTCTGCCTGGGTGCCAGCAGCTCCTGTCGAGGCT...CCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCTTCATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | CAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTAAGAGGGATACAATGTAACTTGTaGGATCCAGCAAGTAAGACG | + |
Preference number: 4 (lower is better) Translates to: QWSVGKTRRDHLFSRVRGIQCNL*DPASKT Trigger: CGTCTTACTTGCTGGATCTCACAAGTTACATTGTAT...CCCTCTTACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | CACAAAATATACAATAGAAGCAGCACATTCATGAAGACTGCTCTTTCAAATAGGACAGCGCTCACAGGCTaGCGCAGCCCACTCATGACC | + |
Preference number: 4 (lower is better) Translates to: HKIYNRSSTFMKTALSNRTALTG*RSPLMT Trigger: GGTCATGAGTGGGCTGCGGCAGCCTGTGAGCGCTGT...CCTATTTGAAAGAGCAGTCTTCATGAATGTGCTGCTTCTATTGTATATTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAACTGATCAAGGATACCTaGCCTGGTCACTCTGCGGAC | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQLIKDT*PGHSAD Trigger: GTCCGCAGAGTGACCAGGGCAGGTATCCTTGATCAG...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | AACAGCTCTGGATCTGGTCATCTTAGCCAAGGTTATTaGCAGAAGAGCGTCTGCCAATGGAGCATCTTCTCT | + |
Preference number: 4 (lower is better) Translates to: NSSGSGHLSQGY*QKSVCQWSIFS Trigger: AGAGAAGATGCTCCATTGGCAGACGCTCTTCTGCAAATAACCTTGGCTAAGATGACCAGATCCAGAGCTGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAATCTCCTCCAGCAGCCTaGTGCATTCTGAGTTGTTGG | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQSPPAA*CILSCW Trigger: CCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGA...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGGGCTTTTCTTGCCATTaGTTGGTCACTGGGCTTTGC | + |
Preference number: 4 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWGFSCH*LVTGLC Trigger: GCAAAGCCCAGTGACCAAGCAATGGCAAGAAAAGCC...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | TCATCTGATGGGAGTGACTACATGTTGGCACAAGTACACATTGCTACATTAGATCACACTTGGCAATTCTaGAGAAGTCTCCCTCCCAGC | + |
Preference number: 4 (lower is better) Translates to: SSDGSDYMLAQVHIATLDHTWQF*RSLPPS Trigger: GCTGGGAGGGAGACTTCTGCAGAATTGCCAAGTGTG...ATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | TCATCTGATGGGAGTGACTACATGTTGGCACAAGTACACATTGCTACATTAGATCAGCCTGCTGCATTCTaGGTTGTTGGTGGCAGAAAA | + |
Preference number: 4 (lower is better) Translates to: SSDGSDYMLAQVHIATLDQPAAF*VVGGRK Trigger: TTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTG...ATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAACTTCCTTCTCTAGAATaGAGAGCCGATGGGAGCCAT | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQLPSLE*RADGSH Trigger: ATGGCTCCCATCGGCTCTTCATTCTAGAGAAGGAAG...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGGTCATGTCAATGATCTaGTCAAGGATACCTGCCCTG | + |
Preference number: 4 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWVMSMI*SRIPAL Trigger: CAGGGCAGGTATCCTTGATCAGATCATTGACATGAC...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATACAGAGCGGCTTTTCTTaGCATTGCTTGGTCACTGGG | + |
Preference number: 4 (lower is better) Translates to: SFSGHRTLVVFSESTDHIQSGFS*HCLVTG Trigger: CCCAGTGACCAAGCAATGGCAAGAAAAGCCGCTCTG...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGTTTCTTGCCATTGCTTaGTCACTGGGCTTTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWFLAIA*SLGFAG Trigger: TCCAGCAAAGCCCAGTGACCAAGCAATGGCAAGAAA...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACAGCAATCGGAGGTCAGTaGCTGGGCAGGTTGAACTGT | + |
Preference number: 4 (lower is better) Translates to: PNLFYAILVIRYVASLCTAIGGQ*LGRLNC Trigger: ACAGTTCAACCTGCCCAGCCACTGACCTCCGATTGC...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAAACGCTGGCTCACACTTaGCAATTCTGCAGAAGTCTC | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQTLAHT*QFCRSL Trigger: GAGACTTCTGCAGAATTGCCAAGTGTGAGCCAGCGT...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | TCTACTAGGGCAACTGTCCTAATCTTTCCTGTAACTTaGCTGGAAGACCAGAATGAAGCACCTATGCTAGCA | + |
Preference number: 4 (lower is better) Translates to: STRATVLIFPVT*LEDQNEAPMLA Trigger: TGCTAGCATAGGTGCTTCATTCTGGTCTTCCAGCAAAGTTACAGGAAAGATTAGGACAGTTGCCCTAGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | CCTAACTTGTTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTTGTGCACACCAAGTAAGGCTCCTTaGACAGTTCTCCTTCTGGGG | + |
Preference number: 4 (lower is better) Translates to: PNLFYAILVIRYVASLCTPSKAP*TVLLLG Trigger: CCCCAGAAGGAGAACTGTTCAAGGAGCCTTACTTGG...TGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAACAAGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | AGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGAGTTTGGAGCTGGTCCTCTGACTTaGTTTCTCGGGAAGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: RLQSYIKLLVQKFTKEFGAGPLT*FLGKSG Trigger: TCCAGACTTCCCGAGAAAGCAAGTCAGAGGACCAGC...TCCAAACTCCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | CTTCTCCAGGGAGGATGGATTAAGAGCACACACTGTAGCCTTTTAATCGCACAGCATTTTTCTTGTAATTaGGATGGAATGCCAGGCTTA | + |
Preference number: 4 (lower is better) Translates to: LLQGGWIKSTHCSLLIAQHFSCN*DGMPGL Trigger: TAAGCCTGGCATTCCATCCCAATTACAAGAAAAATG...CTGTGCGATTAAAAGGCTACAGTGTGTGCTCTTAATCCATCCTCCCTGGAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGCTTCCAGAAACACCCTaGCTGTTCTCACATCAACTT | + |
Preference number: 4 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVLPETP*LFSHQL Trigger: AAGTTGATGTGAGAACAGCCAGGGTGTTTCTGGAAG...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | GCAATCAAATATGGAAGACAGGAGCAGTGGACCCAACAAATATTCTACAGTGTGGGTTACTCCGAGGTATaGAATAAGGCACATTGCACA | + |
Preference number: 4 (lower is better) Translates to: AIKYGRQEQWTQQIFYSVGYSEV*NKAHCT Trigger: TGTGCAATGTGCCTTATTCCATACCTCGGAGTAACC...CACACTGTAGAATATTTGTTGGGTCCACTGCTCCTGTCTTCCATATTTGATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGAGTTTGGAGTGGGCAAATACTTCTaGGGGCTGGTTGGTGCTGTT | + |
Preference number: 4 (lower is better) Translates to: RLQSYIKLLVQKFTKEFGVGKYF*GLVGAV Trigger: AACAGCACCAACCAGCCCCCAGAAGTATTTGCCCAC...TCCAAACTCCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAATACCATCCCCAAGGATaGTGTACAAAAAGCCATCAG | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQYHPQG*CTKSHQ Trigger: CTGATGGCTTTTTGTACATCATCCTTGGGGATGGTA...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGAGTTTGGATTGGTGCTGTTGAAGTaGGGGTTACTCCGAGGTATG | + |
Preference number: 4 (lower is better) Translates to: RLQSYIKLLVQKFTKEFGLVLLK*GLLRGM Trigger: CATACCTCGGAGTAACCCTCACTTCAACAGCACCAA...TCCAAACTCCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | TACATGTTGGCACAAGTACACATTGCTACATTAGATCCACAGCACATTGAAGGCAAGACGTCATGTCAATaGTCTGATCAAGGATACCTG | + |
Preference number: 4 (lower is better) Translates to: YMLAQVHIATLDPQHIEGKTSCQ*SDQGYL Trigger: CAGGTATCCTTGATCAGATCATTGACATGACGTCTT...GCCTTCAATGTGCTGTGGATCTAATGTAGCAATGTGTACTTGTGCCAACATGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATACCCACCGTTCCTGGTTaGTGGTATAAGACACATACA | + |
Preference number: 4 (lower is better) Translates to: SFSGHRTLVVFSESTDHIPTVPG*WYKTHT Trigger: TGTATGTGTCTTATACCACCAACCAGGAACGGTGGG...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATAGTCACTGGGCTTTGCTaGAGGGTTAAGAAATTCCCA | + |
Preference number: 4 (lower is better) Translates to: SFSGHRTLVVFSESTDHIVTGLC*RVKKFP Trigger: TGGGAATTTCTTAACCCTCCAGCAAAGCCCAGTGAC...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAATCATCAGCAGTTGTTTaGAGAAGACCTGGAATATGG | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQSSAVV*RRPGIW Trigger: CCATATTCCAGGTCTTCTTCAAACAACTGCTGATGA...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR TCA 90 bp | CACAAAATATACAATAGAAGCAGCACATTCATGAAGACTGCTCTTTCAAATAGGTCAGCACAGAGCCTGTaGAGTCACTTAACCCATCCA | + |
Preference number: 4 (lower is better) Translates to: HKIYNRSSTFMKTALSNRSAQSL*SHLTHP Trigger: TGGATGGGTTAAGTGACTTCACAGGCTCTGTGCTGA...CCTATTTGAAAGAGCAGTCTTCATGAATGTGCTGCTTCTATTGTATATTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCCTTTGCAGTAGTCTTTaGAGAGGAGTGGAAGTGCTA | + |
Preference number: 4 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFLCSSL*RGVEVL Trigger: TAGCACTTCCACTCCTCTGCAAAGACTACTGCAAAG...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATATTGGTCACTGGGCTTTaGTGGAGGGTTAAGAAATTC | + |
Preference number: 4 (lower is better) Translates to: SFSGHRTLVVFSESTDHILVTGL*WRVKKF Trigger: GAATTTCTTAACCCTCCAGCAAAGCCCAGTGACCAA...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | AGAAATGAAGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGTGGAATAAGGCACATTaGACATGTCGGTGTCCACGT | + |
Preference number: 4 (lower is better) Translates to: RNEDYNLTSSCLFRNSPRWNKAH*TCRCPR Trigger: ACGTGGACACCGACATGTGCAATGTGCCTTATTCCA...CCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCTTCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCGATGGGGGTTTTTCCTaGATACTGTGTATTCCACAA | + |
Preference number: 4 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFDGGFS*ILCIPQ Trigger: TTGTGGAATACACAGTATCCAGGAAAAACCCCCATC...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAATTATCTGTAGGATTCTaGCTGATGACCTGTTTTTCC | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQLSVGF*LMTCFS Trigger: GGAAAAACAGGTCATCAGCCAGAATCCTACAGATAA...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | TCATCTGATGGGAGTGACTACATGTTGGCACAAGTACACATTGCTACATTAGATGCATTAAAGGTCTTTTaGGGTCTACGATCTTGTAGA | + |
Preference number: 4 (lower is better) Translates to: SSDGSDYMLAQVHIATLDALKVF*GLRSCR Trigger: TCTACAAGATCGTAGACCCCAAAAGACCTTTAATGC...ATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | TTTCTTGCTTTTTCATCTGATGGGAGTGACTACATGTaGGCACAAGTACACATTGCTACATTAGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: FLAFSSDGSDYM*AQVHIATLDPQ Trigger: CTGTGGATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGAAAAAGCAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAAATTCTGAGTTGTTGGTaGCAGAAAAGATCTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQILSCW*QKRSCS Trigger: AGAACAAGATCTTTTCTGCCACCAACAACTCAGAAT...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AGAAATGAAGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGTGTTTGAAGAAGACCTaGAATATGGCCTCGGCAAGT | + |
Preference number: 4 (lower is better) Translates to: RNEDYNLTSSCLFRNSPRCLKKT*NMASAS Trigger: ACTTGCCGAGGCCATATTCCAGGTCTTCTTCAAACA...CCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCTTCATTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | TTCTATGCCATATTAGTAATCAGATATGTGGCTAGTTaGTGCACATATGACAGAGAGTCAGAGAGCAAATGC | + |
Preference number: 4 (lower is better) Translates to: FYAILVIRYVAS*CTYDRESESKC Trigger: GCATTTGCTCTCTGACTCTCTGTCATATGTGCACAAACTAGCCACATATCTGATTACTAATATGGCATAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR GCA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATAGGGTCATACTCTTACTaGTTGATAGAATGTAAACCT | + |
Preference number: 4 (lower is better) Translates to: SFSGHRTLVVFSESTDHIGSYSY*LIECKP Trigger: AGGTTTACATTCTATCAAGCAGTAAGAGTATGACCC...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CCA 90 bp | AACAGAGAAAATGTGTCTGAGGCCACCATTACCAAGGGACTAATTTTCTTCCAAGAATTCAAGAAGAGATaGCTCACTTTCATAATCTCT | + |
Preference number: 4 (lower is better) Translates to: NRENVSEATITKGLIFFQEFKKR*LTFIIS Trigger: AGAGATTATGAAAGTGAGCCATCTCTTCTTGAATTC...TTGGAAGAAAATTAGTCCCTTGGTAATGGTGGCCTCAGACACATTTTCTCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | AATTGGTCACATAGTCACACCATCATCTACCAGTTATaGCTATCTACTTTTCTCCTAAGGATGGAAAGAAAG | + |
Preference number: 4 (lower is better) Translates to: NWSHSHTIIYQL*LSTFLLRMERK Trigger: CTTTCTTTCCATCCTTAGGAGAAAAGTAGATAGCAATAACTGGTAGATGATGGTGTGACTATGTGACCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | AACAGAAATGAAGATTACAATCTTACATCAAGCTGCTaGTTCAGAAATTCACCAAGGAGTTTGGAAACATGC | + |
Preference number: 4 (lower is better) Translates to: NRNEDYNLTSSC*FRNSPRSLETC Trigger: GCATGTTTCCAAACTCCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCTTCATTTCTGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
3UTR CAA 72 bp | AAACCATCAAGAAAAATGTCTGTCAGACTCTTGCAATaGAAAGCTAGGGCACATCATTTCTTTAAGAAAATC | + |
Preference number: 4 (lower is better) Translates to: KPSRKMSVRLLQ*KARAHHFFKKI Trigger: GATTTTCTTAAAGAAATGATGTGCCCTAGCTTTCAATTGCAAGAGTCTGACAGACATTTTTCTTGATGGTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | AAGAGCCGATGGGAGCCATCCCCGCTGTGCACAGCGCTCACAGGCTaGCGCAGCCCACTCATGACCTCCTGGACACAGAGGCAGTTGTGT | + |
Preference number: 5 (lower is better) Translates to: KSRWEPSPLCTALTG*RSPLMTSWTQRQLC Trigger: ACACAACTGCCTCTGTGTCCAGGAGGTCATGAGTGGGCTGCGGCAGCCTGTGAGCGCTGTGCACAGCGGGGATGGCTCCCATCGGCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | GCTCACACTTGGCAATTCTGCAGAAGTCTCCCTCCCAGCCGGGACTaGAGCAGCACTTGCCAGTGGGGGTGTAGTAGCCGTTTCGACAGA | + |
Preference number: 5 (lower is better) Translates to: AHTWQFCRSLPPSRD*SSTCQWGCSSRFDR Trigger: TCTGTCGAAACGGCTACTACACCCCCACTGGCAAGTGCTGCTGCAGTCCCGGCTGGGAGGGAGACTTCTGCAGAATTGCCAAGTGTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 90 bp | ACGCCCCAATCCAGGGCTGTCACTCTGCAGGCAGCAAGATACTCGTaGGTAGAAGCCACCACACAGGATCTCTCCTCCACTGAGCAGCTC | + |
Preference number: 5 (lower is better) Translates to: TPQSRAVTLQAARYS*VEATTQDLSSTEQL Trigger: GAGCTGCTCAGTGGAGGAGAGATCCTGTGTGGTGGCTTCTACCCACGAGTATCTTGCTGCCTGCAGAGTGACAGCCCTGGATTGGGGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 90 bp | CACGGCACATCTGCCTGGATCATGGAGGCCGTGGGCAAATACTTCTaGGGGCTGGTTGGTGCTGTTGAAGTGAGGGTTACTCCGAGGTAT | + |
Preference number: 5 (lower is better) Translates to: HGTSAWIMEAVGKYF*GLVGAVEVRVTPRY Trigger: ATACCTCGGAGTAACCCTCACTTCAACAGCACCAACCAGCCCCCAGAAGTATTTGCCCACGGCCTCCATGATCCAGGCAGATGTGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 90 bp | AAGATACTCGTGGGTAGAAGCCACCACACAGGATCTCTCCTCCACTaGGCAGCTCCAGCTGGGACATCACCCGCCTGTCCCTTCTCTTTA | + |
Preference number: 5 (lower is better) Translates to: KILVGRSHHTGSLLH*AAPAGTSPACPFSL Trigger: TAAAGAGAAGGGACAGGCGGGTGATGTCCCAGCTGGAGCTGCTCAGTGGAGGAGAGATCCTGTGTGGTGGCTTCTACCCACGAGTATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | CTCCAAATCCCAAGATGTGACCCGAAAAGTAGCCTCGACAGGAGCTaGTGGCACCCAGGCAGAGCGGCTTTTCTTGCCATTGCTTGGTCA | + |
Preference number: 5 (lower is better) Translates to: LQIPRCDPKSSLDRS*WHPGRAAFLAIAWS Trigger: TGACCAAGCAATGGCAAGAAAAGCCGCTCTGCCTGGGTGCCAGCAGCTCCTGTCGAGGCTACTTTTCGGGTCACATCTTGGGATTTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 90 bp | CCCTTTTTACAGAGGCACTTGTTCGGTCTGACACAGACACCTCCATaGCGGCACGCTGGCTCACACTTGGCAATTCTGCAGAAGTCTCCC | + |
Preference number: 5 (lower is better) Translates to: PFLQRHLFGLTQTPP*RHAGSHLAILQKSP Trigger: GGGAGACTTCTGCAGAATTGCCAAGTGTGAGCCAGCGTGCCGTCATGGAGGTGTCTGTGTCAGACCGAACAAGTGCCTCTGTAAAAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | GGGAATGCGGGGAGCAGGGAGCACATTGGATCTCCTCCAGCAGCCTaGTGCATTCTGAGTTGTTGGTGGCAGAAAAGATCTTGTTCTCCA | + |
Preference number: 5 (lower is better) Translates to: GNAGSREHIGSPPAA*CILSCWWQKRSCSP Trigger: TGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGATCCAATGTGCTCCCTGCTCCCCGCATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 90 bp | GAGCACATTGGATCTCCTCCAGCAGCCTGCTGCATTCTGAGTTGTTaGTGGCAGAAAAGATCTTGTTCTCCAGACGCCCCAATCCAGGGC | + |
Preference number: 5 (lower is better) Translates to: EHIGSPPAACCILSC*WQKRSCSPDAPIQG Trigger: GCCCTGGATTGGGGCGTCTGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGATCCAATGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 90 bp | AAGCCATCAGGACCAAAGAGCAGCTGTCCCCCAAGATGCTTTCGGTaGAGCTCTGCGACTTCCAGAAACACCCTGGCTGTTCTCACATCA | + |
Preference number: 5 (lower is better) Translates to: KPSGPKSSCPPRCFR*SSATSRNTLAVLTS Trigger: TGATGTGAGAACAGCCAGGGTGTTTCTGGAAGTCGCAGAGCTCCACCGAAAGCATCTTGGGGGACAGCTGCTCTTTGGTCCTGATGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 90 bp | CATGGAGGCCGTGGGCAAATACTTCTGGGGGCTGGTTGGTGCTGTTaGAGTGAGGGTTACTCCGAGGTATGGAATAAGGCACATTGCACA | + |
Preference number: 5 (lower is better) Translates to: HGGRGQILLGAGWCC*SEGYSEVWNKAHCT Trigger: TGTGCAATGTGCCTTATTCCATACCTCGGAGTAACCCTCACTTCAACAGCACCAACCAGCCCCCAGAAGTATTTGCCCACGGCCTCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | AATGCGGGGAGCAGGGAGCACATTGGATCTCCTCCAGCAGCCTGCTaGATTCTGAGTTGTTGGTGGCAGAAAAGATCTTGTTCTCCAGAC | + |
Preference number: 5 (lower is better) Translates to: NAGSREHIGSPPAAC*ILSCWWQKRSCSPD Trigger: GTCTGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGATCCAATGTGCTCCCTGCTCCCCGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | AGGACCAAAGAGCAGCTGTCCCCCAAGATGCTTTCGGTGGAGCTCTaGGACTTCCAGAAACACCCTGGCTGTTCTCACATCAACTTGATG | + |
Preference number: 5 (lower is better) Translates to: RTKEQLSPKMLSVEL*DFQKHPGCSHINLM Trigger: CATCAAGTTGATGTGAGAACAGCCAGGGTGTTTCTGGAAGTCGCAGAGCTCCACCGAAAGCATCTTGGGGGACAGCTGCTCTTTGGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 90 bp | CACATTGGATCTCCTCCAGCAGCCTGCTGCATTCTGAGTTGTTGGTaGCAGAAAAGATCTTGTTCTCCAGACGCCCCAATCCAGGGCTGT | + |
Preference number: 5 (lower is better) Translates to: HIGSPPAACCILSCW*QKRSCSPDAPIQGC Trigger: ACAGCCCTGGATTGGGGCGTCTGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGATCCAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 90 bp | ATTGAGGACCAAGATAGCCCTTTTTACAGAGGCACTTGTTCGGTCTaGCACAGACACCTCCATGACGGCACGCTGGCTCACACTTGGCAA | + |
Preference number: 5 (lower is better) Translates to: IEDQDSPFYRGTCSV*HRHLHDGTLAHTWQ Trigger: TTGCCAAGTGTGAGCCAGCGTGCCGTCATGGAGGTGTCTGTGTCAGACCGAACAAGTGCCTCTGTAAAAAGGGCTATCTTGGTCCTCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | CAGTGGAGTGTTGGTAAGACCAGAAGGGACCACCTCTTTTCTAGGGTAAGAGGGTGGACACAGAGGCAGTaGTGTTTGTGTTTTCTGCTG | + |
Preference number: 5 (lower is better) Translates to: QWSVGKTRRDHLFSRVRGWTQRQ*CLCFLL Trigger: CAGCAGAAAACACAAACACAACTGCCTCTGTGTCCA...CCCTCTTACCCTAGAAAAGAGGTGGTCCCTTCTGGTCTTACCAACACTCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | ATCCAGCAAGTAAGACGTCATGTCAATGATCTGATCAAGGATACCTaGCCTGGTCACTCTGCGGACGTTCCTGTCCACTTGTTCACATTG | + |
Preference number: 5 (lower is better) Translates to: IQQVRRHVNDLIKDT*PGHSADVPVHLFTL Trigger: CAATGTGAACAAGTGGACAGGAACGTCCGCAGAGTGACCAGGGCAGGTATCCTTGATCAGATCATTGACATGACGTCTTACTTGCTGGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGAGTTTGGAGGAGCAGGGAGCACATaGGATCTCCTCCAGCAGCCT | + |
Preference number: 5 (lower is better) Translates to: RLQSYIKLLVQKFTKEFGGAGST*DLLQQP Trigger: AGGCTGCTGGAGGAGATCCAATGTGCTCCCTGCTCC...TCCAAACTCCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | GAATATGGCCTCGGCAAGTATAAAAGAATTCTTTGCAGTAGTCTTTaGAGAGGAGTGGAAGTGCTAGGTCCCCATCCAGGACATCTCTTT | + |
Preference number: 5 (lower is better) Translates to: EYGLGKYKRILCSSL*RGVEVLGPHPGHLF Trigger: AAAGAGATGTCCTGGATGGGGACCTAGCACTTCCACTCCTCTGCAAAGACTACTGCAAAGAATTCTTTTATACTTGCCGAGGCCATATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGGTGGCAGAAAAGATCTaGTTCTCCAGACGCCCCAAT | + |
Preference number: 5 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWVAEKI*FSRRPN Trigger: ATTGGGGCGTCTGGAGAACAAGATCTTTTCTGCCAC...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCTGCTGGTCCTCTGACTaGCTTTCTCGGGAAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFCWSSD*LSREVW Trigger: CCAGACTTCCCGAGAAAGCAAGTCAGAGGACCAGCA...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGCAGAGGCAGTTGTGTTaGTGTTTTCTGCTGATCCCC | + |
Preference number: 5 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWQRQLC*CFLLIP Trigger: GGGGATCAGCAGAAAACACAAACACAACTGCCTCTG...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | TACATGTTGGCACAAGTACACATTGCTACATTAGATCCACAGCACATTGAAGGCTTTTCTTGCCATTGCTaGGTCACTGGGCTTTGCTGG | + |
Preference number: 5 (lower is better) Translates to: YMLAQVHIATLDPQHIEGFSCHC*VTGLCW Trigger: CCAGCAAAGCCCAGTGACCAAGCAATGGCAAGAAAA...GCCTTCAATGTGCTGTGGATCTAATGTAGCAATGTGTACTTGTGCCAACATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATAGCAGAGCGGCTTTTCTaGCCATTGCTTGGTCACTGG | + |
Preference number: 5 (lower is better) Translates to: SFSGHRTLVVFSESTDHIAERLF*PLLGHW Trigger: CCAGTGACCAAGCAATGGCAAGAAAAGCCGCTCTGC...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGGACGTTCCTGTCCACTaGTTCACATTGAGGACCAAG | + |
Preference number: 5 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWDVPVH*FTLRTK Trigger: CTTGGTCCTCAATGTGAACAAGTGGACAGGAACGTC...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCCACGCTGGCTCACACTaGGCAATTCTGCAGAAGTCT | + |
Preference number: 5 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFHAGSH*AILQKS Trigger: AGACTTCTGCAGAATTGCCAAGTGTGAGCCAGCGTG...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 90 bp | ACAGCCTCTGTAAACAAATCCACCAACCAAAGGGCCGTTACTGAATaGCTTGAATTCAAGAAGAGATGGCTCACTTTCATAATCTCTTCC | + |
Preference number: 5 (lower is better) Translates to: TASVNKSTNQRAVTE*LEFKKRWLTFIISS Trigger: GGAAGAGATTATGAAAGTGAGCCATCTCTTCTTGAATTCAAGCCATTCAGTAACGGCCCTTTGGTTGGTGGATTTGTTTACAGAGGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AAGAGCACACACTGTAGCCTTTTAATCGCACAGACTCTGATATTCTTGCTATGGTTTTTACAGAGGCACTaGTTCGGTCTGACACAGACA | + |
Preference number: 5 (lower is better) Translates to: KSTHCSLLIAQTLIFLLWFLQRH*FGLTQT Trigger: TGTCTGTGTCAGACCGAACAAGTGCCTCTGTAAAAA...CCATAGCAAGAATATCAGAGTCTGTGCGATTAAAAGGCTACAGTGTGTGCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 90 bp | TTATTCCACTTTGAACAAGTTTGTGAATGTCCAAGTAAGGCTCCTTaGACAGTTCTCCTTCTGGGGTTAGAATCTTCACGTAGCCTTCCT | + |
Preference number: 5 (lower is better) Translates to: LFHFEQVCECPSKAP*TVLLLGLESSRSLP Trigger: AGGAAGGCTACGTGAAGATTCTAACCCCAGAAGGAGAACTGTTCAAGGAGCCTTACTTGGACATTCACAAACTTGTTCAAAGTGGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCCTGCTGCATTCTGAGTaGTTGGTGGCAGAAAAGATC | + |
Preference number: 5 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFLLHSE*LVAEKI Trigger: GATCTTTTCTGCCACCAACAACTCAGAATGCAGCAG...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | CACAAAATATACAATAGAAGCAGCACATTCATGAAGACTGCTCTTTCAAATAGGCGGCTTTTCTTGCCATaGCTTGGTCACTGGGCTTTG | + |
Preference number: 5 (lower is better) Translates to: HKIYNRSSTFMKTALSNRRLFLP*LGHWAL Trigger: CAAAGCCCAGTGACCAAGCAATGGCAAGAAAAGCCG...CCTATTTGAAAGAGCAGTCTTCATGAATGTGCTGCTTCTATTGTATATTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AGATGCTCAGACAATAAGCTGATGTACCATTCACAAACCTTGCTGATATACTTCGTCCACTTGTTCACATaGAGGACCAAGATAGCCCTT | + |
Preference number: 5 (lower is better) Translates to: RCSDNKLMYHSQTLLIYFVHLFT*RTKIAL Trigger: AAGGGCTATCTTGGTCCTCAATGTGAACAAGTGGAC...GAAGTATATCAGCAAGGTTTGTGAATGGTACATCAGCTTATTGTCTGAGCATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATACCGTTACTGAATGGCTaGAATTCAAGAAGAGATGGC | + |
Preference number: 5 (lower is better) Translates to: SFSGHRTLVVFSESTDHIPLLNG*NSRRDG Trigger: GCCATCTCTTCTTGAATTCAAGCCATTCAGTAACGG...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | TCATCTGATGGGAGTGACTACATGTTGGCACAAGTACACATTGCTACATTAGATTTCATCAGCAGTTGTTaGAAGAAGACCTGGAATATG | + |
Preference number: 5 (lower is better) Translates to: SSDGSDYMLAQVHIATLDFISSC*KKTWNM Trigger: CATATTCCAGGTCTTCTTCAAACAACTGCTGATGAA...ATCTAATGTAGCAATGTGTACTTGTGCCAACATGTAGTCACTCCCATCAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 90 bp | CGATCTTGTAGAGTTTTCCATTGTGAGTCTGGGTCATACTCTTACTaGTTGATAGAATGTAAACCTCTCCTAATTCATCTTCTCCAAATC | + |
Preference number: 5 (lower is better) Translates to: RSCRVFHCESGSYSY*LIECKPLLIHLLQI Trigger: GATTTGGAGAAGATGAATTAGGAGAGGTTTACATTCTATCAAGCAGTAAGAGTATGACCCAGACTCACAATGGAAAACTCTACAAGATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | CACAAAATATACAATAGAAGCAGCACATTCATGAAGACTGCTCTTTCAAATAGGCTGCATTCTGAGTTGTaGGTGGCAGAAAAGATCTTG | + |
Preference number: 5 (lower is better) Translates to: HKIYNRSSTFMKTALSNRLHSEL*VAEKIL Trigger: CAAGATCTTTTCTGCCACCAACAACTCAGAATGCAG...CCTATTTGAAAGAGCAGTCTTCATGAATGTGCTGCTTCTATTGTATATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | TCATTTTCTGGGCATAGAACTTTGGTTGTGTTCTCTGAAAGTACAGACCACATATCATACTCTTACTGCTaGATAGAATGTAAACCTCTC | + |
Preference number: 5 (lower is better) Translates to: SFSGHRTLVVFSESTDHISYSYC*IECKPL Trigger: GAGAGGTTTACATTCTATCAAGCAGTAAGAGTATGA...TATGTGGTCTGTACTTTCAGAGAACACAACCAAAGTTCTATGCCCAGAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS-3UTR CAA 90 bp | AGAAATGAAGATTACAATCTTACATCAAGCTGCTTGTTCAGAAATTCACCAAGGAAAATTCATCAGCAGTaGTTTGAAGAAGACCTGGAA | + |
Preference number: 5 (lower is better) Translates to: RNEDYNLTSSCLFRNSPRKIHQQ*FEEDLE Trigger: TTCCAGGTCTTCTTCAAACAACTGCTGATGAATTTT...CCTTGGTGAATTTCTGAACAAGCAGCTTGATGTAAGATTGTAATCTTCATTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | TGGGAGCCATCCCCGCTGTGCACAGCGCTCACAGGCTaGCGCAGCCCACTCATGACCTCCTGGACACAGAGG | + |
Preference number: 6 (lower is better) Translates to: WEPSPLCTALTG*RSPLMTSWTQR Trigger: CCTCTGTGTCCAGGAGGTCATGAGTGGGCTGCGGCAGCCTGTGAGCGCTGTGCACAGCGGGGATGGCTCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 72 bp | GTGGGTAGAAGCCACCACACAGGATCTCTCCTCCACTaGGCAGCTCCAGCTGGGACATCACCCGCCTGTCCC | + |
Preference number: 6 (lower is better) Translates to: VGRSHHTGSLLH*AAPAGTSPACP Trigger: GGGACAGGCGGGTGATGTCCCAGCTGGAGCTGCTCAGTGGAGGAGAGATCCTGTGTGGTGGCTTCTACCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | CGATCCACGGCACATCTGCCTGGATCATGGAGGCCGTaGGCAAATACTTCTGGGGGCTGGTTGGTGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: RSTAHLPGSWRP*ANTSGGWLVLL Trigger: CAACAGCACCAACCAGCCCCCAGAAGTATTTGCCCACGGCCTCCATGATCCAGGCAGATGTGCCGTGGATCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | GCCGTTTCGACAGAGCCGGGAGCAATCGGAGGTCAGTaGCTGGGCAGGTTGAACTGTGACTCTGCATTCCTC | + |
Preference number: 6 (lower is better) Translates to: AVSTEPGAIGGQ*LGRLNCDSAFL Trigger: GAGGAATGCAGAGTCACAGTTCAACCTGCCCAGCCACTGACCTCCGATTGCTCCCGGCTCTGTCGAAACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | GCGCTCACAGGCTGCCGCAGCCCACTCATGACCTCCTaGACACAGAGGCAGTTGTGTTTGTGTTTTCTGCTG | + |
Preference number: 6 (lower is better) Translates to: ALTGCRSPLMTS*TQRQLCLCFLL Trigger: CAGCAGAAAACACAAACACAACTGCCTCTGTGTCCAGGAGGTCATGAGTGGGCTGCGGCAGCCTGTGAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | GTAGGATGTCGATCCACGGCACATCTGCCTGGATCATaGAGGCCGTGGGCAAATACTTCTGGGGGCTGGTTG | + |
Preference number: 6 (lower is better) Translates to: VGCRSTAHLPGS*RPWANTSGGWL Trigger: CAACCAGCCCCCAGAAGTATTTGCCCACGGCCTCCATGATCCAGGCAGATGTGCCGTGGATCGACATCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | GAGCAGCTGTCCCCCAAGATGCTTTCGGTGGAGCTCTaGGACTTCCAGAAACACCCTGGCTGTTCTCACATC | + |
Preference number: 6 (lower is better) Translates to: EQLSPKMLSVEL*DFQKHPGCSHI Trigger: GATGTGAGAACAGCCAGGGTGTTTCTGGAAGTCGCAGAGCTCCACCGAAAGCATCTTGGGGGACAGCTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | CCAAGATGTGACCCGAAAAGTAGCCTCGACAGGAGCTaGTGGCACCCAGGCAGAGCGGCTTTTCTTGCCATT | + |
Preference number: 6 (lower is better) Translates to: PRCDPKSSLDRS*WHPGRAAFLAI Trigger: AATGGCAAGAAAAGCCGCTCTGCCTGGGTGCCAGCAGCTCCTGTCGAGGCTACTTTTCGGGTCACATCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | TCCAGGGCTGTCACTCTGCAGGCAGCAAGATACTCGTaGGTAGAAGCCACCACACAGGATCTCTCCTCCACT | + |
Preference number: 6 (lower is better) Translates to: SRAVTLQAARYS*VEATTQDLSST Trigger: AGTGGAGGAGAGATCCTGTGTGGTGGCTTCTACCCACGAGTATCTTGCTGCCTGCAGAGTGACAGCCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | GTTCGGTCTGACACAGACACCTCCATGACGGCACGCTaGCTCACACTTGGCAATTCTGCAGAAGTCTCCCTC | + |
Preference number: 6 (lower is better) Translates to: VRSDTDTSMTAR*LTLGNSAEVSL Trigger: GAGGGAGACTTCTGCAGAATTGCCAAGTGTGAGCCAGCGTGCCGTCATGGAGGTGTCTGTGTCAGACCGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | TCCAGCAGCCTGCTGCATTCTGAGTTGTTGGTGGCAGAAAAGATCTaGTTCTCCAGACGCCCCAATCCAGGGCTGTCACTCTGCAGGCAG | + |
Preference number: 6 (lower is better) Translates to: SSSLLHSELLVAEKI*FSRRPNPGLSLCRQ Trigger: CTGCCTGCAGAGTGACAGCCCTGGATTGGGGCGTCTGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | CAGGAGCTGCTGGCACCCAGGCAGAGCGGCTTTTCTTGCCATTGCTaGGTCACTGGGCTTTGCTGGAGGGTTAAGAAATTCCCATTGCGA | + |
Preference number: 6 (lower is better) Translates to: QELLAPRQSGFSCHC*VTGLCWRVKKFPLR Trigger: TCGCAATGGGAATTTCTTAACCCTCCAGCAAAGCCCAGTGACCAAGCAATGGCAAGAAAAGCCGCTCTGCCTGGGTGCCAGCAGCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | AAGCCATCAGGACCAAAGAGCAGCTGTCCCCCAAGATaGTTTCGGTGGAGCTCTGCGACTTCCAGAAACACC | + |
Preference number: 6 (lower is better) Translates to: KPSGPKSSCPPR*FRWSSATSRNT Trigger: GGTGTTTCTGGAAGTCGCAGAGCTCCACCGAAAGCATCTTGGGGGACAGCTGCTCTTTGGTCCTGATGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | TCTGCCTGGATCATGGAGGCCGTGGGCAAATACTTCTaGGGGCTGGTTGGTGCTGTTGAAGTGAGGGTTACT | + |
Preference number: 6 (lower is better) Translates to: SAWIMEAVGKYF*GLVGAVEVRVT Trigger: AGTAACCCTCACTTCAACAGCACCAACCAGCCCCCAGAAGTATTTGCCCACGGCCTCCATGATCCAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | GGAGCACATTGGATCTCCTCCAGCAGCCTGCTGCATTCTGAGTTGTaGGTGGCAGAAAAGATCTTGTTCTCCAGACGCCCCAATCCAGGG | + |
Preference number: 6 (lower is better) Translates to: GAHWISSSSLLHSEL*VAEKILFSRRPNPG Trigger: CCCTGGATTGGGGCGTCTGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGATCCAATGTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 72 bp | CAAGATAGCCCTTTTTACAGAGGCACTTGTTCGGTCTaGCACAGACACCTCCATGACGGCACGCTGGCTCAC | + |
Preference number: 6 (lower is better) Translates to: QDSPFYRGTCSV*HRHLHDGTLAH Trigger: GTGAGCCAGCGTGCCGTCATGGAGGTGTCTGTGTCAGACCGAACAAGTGCCTCTGTAAAAAGGGCTATCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | AGTGAGGGTTACTCCGAGGTATGGAATAAGGCACATTaGACATGTCGGTGTCCACGTCCAGCCTCAGCACAG | + |
Preference number: 6 (lower is better) Translates to: SEGYSEVWNKAH*TCRCPRPASAQ Trigger: CTGTGCTGAGGCTGGACGTGGACACCGACATGTGCAATGTGCCTTATTCCATACCTCGGAGTAACCCTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | CAGGGAGCACATTGGATCTCCTCCAGCAGCCTGCTGCATTCTGAGTaGTTGGTGGCAGAAAAGATCTTGTTCTCCAGACGCCCCAATCCA | + |
Preference number: 6 (lower is better) Translates to: QGAHWISSSSLLHSE*LVAEKILFSRRPNP Trigger: TGGATTGGGGCGTCTGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGATCCAATGTGCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 72 bp | GATACTGTGTATTCCACAACCCGAAGAATGTGGTCGTaGGGCCCAATAGCCCACCGTTCCTGGTTGGTGGTA | + |
Preference number: 6 (lower is better) Translates to: DTVYSTTRRMWS*GPIAHRSWLVV Trigger: TACCACCAACCAGGAACGGTGGGCTATTGGGCCTCACGACCACATTCTTCGGGTTGTGGAATACACAGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | TCTCCTCCAGCAGCCTGCTGCATTCTGAGTTGTTGGTaGCAGAAAAGATCTTGTTCTCCAGACGCCCCAATC | + |
Preference number: 6 (lower is better) Translates to: SPPAACCILSCW*QKRSCSPDAPI Trigger: GATTGGGGCGTCTGGAGAACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | ACCTGCCCTGGTCACTCTGCGGACGTTCCTGTCCACTTGTTCACATaGAGGACCAAGATAGCCCTTTTTACAGAGGCACTTGTTCGGTCT | + |
Preference number: 6 (lower is better) Translates to: TCPGHSADVPVHLFT*RTKIALFTEALVRS Trigger: AGACCGAACAAGTGCCTCTGTAAAAAGGGCTATCTTGGTCCTCAATGTGAACAAGTGGACAGGAACGTCCGCAGAGTGACCAGGGCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | AGCAGGGAGCACATTGGATCTCCTCCAGCAGCCTGCTaGATTCTGAGTTGTTGGTGGCAGAAAAGATCTTGT | + |
Preference number: 6 (lower is better) Translates to: SREHIGSPPAAC*ILSCWWQKRSC Trigger: ACAAGATCTTTTCTGCCACCAACAACTCAGAATGCAGCAGGCTGCTGGAGGAGATCCAATGTGCTCCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | GTAAGACGTCATGTCAATGATCTGATCAAGGATACCTaGCCTGGTCACTCTGCGGACGTTCCTGTCCACTTG | + |
Preference number: 6 (lower is better) Translates to: VRRHVNDLIKDT*PGHSADVPVHL Trigger: CAAGTGGACAGGAACGTCCGCAGAGTGACCAGGGCAGGTATCCTTGATCAGATCATTGACATGACGTCTTAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | TTTCTCGTAGTCTTCCATCTGGCCCAAGTAGTTAGATaGTGGTCCTCTGACTTGCTTTCTCGGGAAGTCTGG | + |
Preference number: 6 (lower is better) Translates to: FLVVFHLAQVVR*WSSDLLSREVW Trigger: CCAGACTTCCCGAGAAAGCAAGTCAGAGGACCAGCATCTAACTACTTGGGCCAGATGGAAGACTACGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | GGCTTTTCTTGCCATTGCTTGGTCACTGGGCTTTGCTaGAGGGTTAAGAAATTCCCATTGCGATCTCCGAAC | + |
Preference number: 6 (lower is better) Translates to: GFSCHCLVTGLC*RVKKFPLRSPN Trigger: GTTCGGAGATCGCAATGGGAATTTCTTAACCCTCCAGCAAAGCCCAGTGACCAAGCAATGGCAAGAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 72 bp | GACTTCCAGAAACACCCTGGCTGTTCTCACATCAACTaGATGGGGGTTTTTCCTGGATACTGTGTATTCCAC | + |
Preference number: 6 (lower is better) Translates to: DFQKHPGCSHIN*MGVFPGYCVFH Trigger: GTGGAATACACAGTATCCAGGAAAAACCCCCATCAAGTTGATGTGAGAACAGCCAGGGTGTTTCTGGAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 72 bp | ACTTCCAGAAACACCCTGGCTGTTCTCACATCAACTTaGTGGGGGTTTTTCCTGGATACTGTGTATTCCACA | + |
Preference number: 6 (lower is better) Translates to: TSRNTLAVLTST*WGFFLDTVYST Trigger: TGTGGAATACACAGTATCCAGGAAAAACCCCCATCAAGTTGATGTGAGAACAGCCAGGGTGTTTCTGGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS GCA 72 bp | TCACTGGGCTTTGCTGGAGGGTTAAGAAATTCCCATTaGGATCTCCGAACACATAGCTTCCGTACAATCTTT | + |
Preference number: 6 (lower is better) Translates to: SLGFAGGLRNSH*DLRTHSFRTIF Trigger: AAAGATTGTACGGAAGCTATGTGTTCGGAGATCGCAATGGGAATTTCTTAACCCTCCAGCAAAGCCCAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | TATAAGACACATACAGCTTTCCATTTTTCTTGTAATTaGGATGGAATGCCAGGCTTAGCAGGCCCCTTTCGT | + |
Preference number: 6 (lower is better) Translates to: YKTHTAFHFSCN*DGMPGLAGPFR Trigger: ACGAAAGGGGCCTGCTAAGCCTGGCATTCCATCCCAATTACAAGAAAAATGGAAAGCTGTATGTGTCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS TCA 72 bp | TTTGAACAAGTTTGTGAATGTCCAAGTAAGGCTCCTTaGACAGTTCTCCTTCTGGGGTTAGAATCTTCACGT | + |
Preference number: 6 (lower is better) Translates to: FEQVCECPSKAP*TVLLLGLESSR Trigger: ACGTGAAGATTCTAACCCCAGAAGGAGAACTGTTCAAGGAGCCTTACTTGGACATTCACAAACTTGTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | GTAAACAAATCCACCAACCAAAGGGCCGTTACTGAATaGCTTGAATTCAAGAAGAGATGGCTCACTTTCATA | + |
Preference number: 6 (lower is better) Translates to: VNKSTNQRAVTE*LEFKKRWLTFI Trigger: TATGAAAGTGAGCCATCTCTTCTTGAATTCAAGCCATTCAGTAACGGCCCTTTGGTTGGTGGATTTGTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | GATGACCTGTTTTTCCCGTTGGAATCTGAGCAAAGTATTGTTAAATaGATGTTTATATCAGTAGGATGTCGATCCACGGCACATCTGCCT | + |
Preference number: 6 (lower is better) Translates to: DDLFFPLESEQSIVK*MFISVGCRSTAHLP Trigger: AGGCAGATGTGCCGTGGATCGACATCCTACTGATATAAACATCAATTTAACAATACTTTGCTCAGATTCCAACGGGAAAAACAGGTCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CCA 72 bp | AGGGCCGTTACTGAATGGCTTGAATTCAAGAAGAGATaGCTCACTTTCATAATCTCTTCCCTTTATTATCTG | + |
Preference number: 6 (lower is better) Translates to: RAVTEWLEFKKR*LTFIISSLYYL Trigger: CAGATAATAAAGGGAAGAGATTATGAAAGTGAGCCATCTCTTCTTGAATTCAAGCCATTCAGTAACGGCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | TCTTGTAGAGTTTTCCATTGTGAGTCTGGGTCATACTCTTACTGCTaGATAGAATGTAAACCTCTCCTAATTCATCTTCTCCAAATCCCA | + |
Preference number: 6 (lower is better) Translates to: SCRVFHCESGSYSYC*IECKPLLIHLLQIP Trigger: TGGGATTTGGAGAAGATGAATTAGGAGAGGTTTACATTCTATCAAGCAGTAAGAGTATGACCCAGACTCACAATGGAAAACTCTACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 72 bp | ATCTGTAGGATTCTGGCTGATGACCTGTTTTTCCCGTaGGAATCTGAGCAAAGTATTGTTAAATTGATGTTT | + |
Preference number: 6 (lower is better) Translates to: ICRILADDLFFP*ESEQSIVKLMF Trigger: AAACATCAATTTAACAATACTTTGCTCAGATTCCAACGGGAAAAACAGGTCATCAGCCAGAATCCTACAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |
||
CDS CAA 90 bp | CCCTTTATTATCTGTAGGATTCTGGCTGATGACCTGTTTTTCCCGTaGGAATCTGAGCAAAGTATTGTTAAATTGATGTTTATATCAGTA | + |
Preference number: 6 (lower is better) Translates to: PFIICRILADDLFFP*ESEQSIVKLMFISV Trigger: TACTGATATAAACATCAATTTAACAATACTTTGCTCAGATTCCAACGGGAAAAACAGGTCATCAGCCAGAATCCTACAGATAATAAAGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079038.4 |