Pregenerated sensors for HHEX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024986Ensembl transcript IDs: ENSMUST00000025944.9, ENSMUST00000128184.3
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGCTTTGGAGTTAAGGCAGCAATGTAAGATGCCATGTAAAAGTTaGGTATACCCTTTCAAAGTGTTCCATGGATTCCCCAAATGTTGC | + |
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Preference number: 1 (lower is better) Translates to: MALELRQQCKMPCKS*VYPFKVFHGFPKCC Trigger: GCAACATTTGGGGAATCCATGGAACACTTTGAAAGGGTATACCCAACTTTTACATGGCATCTTACATTGCTGCCTTAACTCCAAAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| 3UTR GCA 90 bp | CCAAAGTTAAGGTCTCAACGCAATGCATGTTTGTTAATTAGCCAGTaGACCAAACATTTTCAAAACTCTACAAGAATTGTTATCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PKLRSQRNACLLISQ*TKHFQNSTRIVISL Trigger: GAGAGAGATAACAATTCTTGTAGAGTTTTGAAAATGTTTGGTGCACTGGCTAATTAACAAACATGCATTGCGTTGAGACCTTAACTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTTGTAAGAACAGACACCGGGAGCCAAGTGCTCTGAAATGGCTTTGGAGTATGCCATGTAAAAGTTaGGTATACCCTTTCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LACKNRHREPSALKWLWSMPCKS*VYPFKV Trigger: CACTTTGAAAGGGTATACCCAACTTTTACATGGCAT...ACTCCAAAGCCATTTCAGAGCACTTGGCTCCCGGTGTCTGTTCTTACAAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACTATGCCATGTAAAAGTTaGGTATACCCTTTCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PGSEALAEQNKIFRILSTMPCKS*VYPFKV Trigger: CACTTTGAAAGGGTATACCCAACTTTTACATGGCAT...AGTTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| 3UTR GCA 72 bp | GTTCCATGGATTCCCCAAATGTTGCCCCCACCTAAGTaGACCTCTAAAGTCGAGGGAATAGCTACAGACTTA | + |
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Preference number: 3 (lower is better) Translates to: VPWIPQMLPPPK*TSKVEGIATDL Trigger: TAAGTCTGTAGCTATTCCCTCGACTTTAGAGGTGCACTTAGGTGGGGGCAACATTTGGGGAATCCATGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| 3UTR-3UTR CAA 90 bp | CACCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACAACGCAATGCATGTTaGTTAATTAGCCAGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: HQGQRHWLSKTRFLESYQQRNAC*LISQCT Trigger: GGTGCACTGGCTAATTAACAAACATGCATTGCGTTG...TTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| 3UTR CCA 72 bp | GAGTTAAGGCAGCAATGTAAGATGCCATGTAAAAGTTaGGTATACCCTTTCAAAGTGTTCCATGGATTCCCC | + |
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Preference number: 3 (lower is better) Translates to: ELRQQCKMPCKS*VYPFKVFHGFP Trigger: GGGGAATCCATGGAACACTTTGAAAGGGTATACCCAACTTTTACATGGCATCTTACATTGCTGCCTTAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| 3UTR GCA 72 bp | AGGTCTCAACGCAATGCATGTTTGTTAATTAGCCAGTaGACCAAACATTTTCAAAACTCTACAAGAATTGTT | + |
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Preference number: 3 (lower is better) Translates to: RSQRNACLLISQ*TKHFQNSTRIV Trigger: AACAATTCTTGTAGAGTTTTGAAAATGTTTGGTGCACTGGCTAATTAACAAACATGCATTGCGTTGAGACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CCA 90 bp | CCTTTCAAAGTGTTCCATGGATTCCCCAAATGTTGCCCCCACCTAAGTGCACCTTTGCCCAGGGGGTCGTaGCGGAGTAGGGCGTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: PFKVFHGFPKCCPHLSAPLPRGS*RSRACV Trigger: CACGCACGCCCTACTCCGCCACGACCCCCTGGGCAA...AGGTGCACTTAGGTGGGGGCAACATTTGGGGAATCCATGGAACACTTTGAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR TCA 90 bp | TTCCATGGATTCCCCAAATGTTGCCCCCACCTAAGTGCACCTCTAAAGTCGAGGGAGTCGGGGTCTTCCTaGGAGGCTGGGGAGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FHGFPKCCPHLSAPLKSRESGSS*EAGEGE Trigger: TTCACCCTCCCCAGCCTCTCAGGAAGACCCCGACTC...CCTCGACTTTAGAGGTGCACTTAGGTGGGGGCAACATTTGGGGAATCCATGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CCA 90 bp | CACCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACGGGGTGGACCGGCGTaGGCTCGTACACCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HQGQRHWLSKTRFLESYQRGGPA*ARTPGS Trigger: GGACCCCGGTGTACGAGCCCACGCCGGTCCACCCCG...TTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CCA 90 bp | TGCACCTCTAAAGTCGAGGGAATAGCTACAGACTTAGGAAAGTCAGTCAAGATCTGCGAGAAGGCGGGGTaGACCGGCGTGGGCTCGTAC | + |
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Preference number: 4 (lower is better) Translates to: CTSKVEGIATDLGKSVKICEKAG*TGVGSY Trigger: GTACGAGCCCACGCCGGTCCACCCCGCCTTCTCGCA...GATCTTGACTGACTTTCCTAAGTCTGTAGCTATTCCCTCGACTTTAGAGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR TCA 90 bp | CCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACTGAGTCGGGGTCTTCCTaGGAGGCTGGGGAGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: PGSEALAEQNKIFRILSTESGSS*EAGEGE Trigger: TTCACCCTCCCCAGCCTCTCAGGAAGACCCCGACTC...AGTTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR TCA 90 bp | CCTTTCAAAGTGTTCCATGGATTCCCCAAATGTTGCCCCCACCTAAGTGCACCTTTGGAGAACCTCACTTaGCCGCCTTTCCTTTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PFKVFHGFPKCCPHLSAPLENLT*PPFLLC Trigger: GCACAAAAGGAAAGGCGGTCAAGTGAGGTTCTCCAA...AGGTGCACTTAGGTGGGGGCAACATTTGGGGAATCCATGGAACACTTTGAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR TCA 90 bp | TGCACCTCTAAAGTCGAGGGAATAGCTACAGACTTAGGAAAGTCAGTCAAGATCAGAGGCTGGGGAGGGTaGACACTGCGAACGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: CTSKVEGIATDLGKSVKIRGWGG*TLRTIQ Trigger: TTGGATCGTTCGCAGTGTTCACCCTCCCCAGCCTCT...GATCTTGACTGACTTTCCTAAGTCTGTAGCTATTCCCTCGACTTTAGAGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR GCA 90 bp | TTCAAAACTCTACAAGAATTGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGAGCAAGGGCTTaGCCAGGGGGTCGTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FKTLQELLSLSLSLSLSLSRARA*PGGRGG Trigger: TCCGCCACGACCCCCTGGGCAAGCCCTTGCTCTGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAATTCTTGTAGAGTTTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CCA 90 bp | AGTGCACCAAACATTTTCAAAACTCTACAAGAATTGTTATCTCTCTCTCTCTCTGCTGCAGCAGCGGCGTaGGCGCATACAGCGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: SAPNIFKTLQELLSLSLSAAAAA*AHTAGL Trigger: GAGTCCCGCTGTATGCGCCCACGCCGCTGCTGCAGC...AGAGAGAGAGAGAGATAACAATTCTTGTAGAGTTTTGAAAATGTTTGGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CCA 90 bp | GGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACTATCTTGTGCAGAGGTCGCTaGAGGAAGGGGCTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GSEALAEQNKIFRILSTILCRGR*RKGLQS Trigger: GCTCTGGAGCCCCTTCCTCCAGCGACCTCTGCACAA...GATAGTTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CCA 90 bp | CACCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACGACGGTCTGGTCGTTaGAGAACCTCACTTGACCGC | + |
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Preference number: 4 (lower is better) Translates to: HQGQRHWLSKTRFLESYQRRSGR*RTSLDR Trigger: GCGGTCAAGTGAGGTTCTCCAACGACCAGACCGTCG...TTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CCA 90 bp | CTTGCTTGTAAGAACAGACACCGGGAGCCAAGTGCTCTGAAATGGCTTTGGAGTCTTTATTCTGTTCACTaGGCAAGTCTTGACCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LACKNRHREPSALKWLWSLYSVH*ASLDPA Trigger: AGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAG...ACTCCAAAGCCATTTCAGAGCACTTGGCTCCCGGTGTCTGTTCTTACAAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR TCA 90 bp | ACAGACTTAGGAAAGTCAGTCAAGATCAGCCTCCTAAAACTTAAAACCTTTAAAAGGACACGAGGCTGGTaGAGGAGGAGTTGGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: TDLGKSVKISLLKLKTFKRTRGW*RRSWGT Trigger: CGTCCCCCAACTCCTCCTTCACCAGCCTCGTGTCCT...TTTAAAGGTTTTAAGTTTTAGGAGGCTGATCTTGACTGACTTTCCTAAGTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR TCA 90 bp | CCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACTGGGGAGAGGTATTTCTaGGTCTCGAACTTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGSEALAEQNKIFRILSTGERYF*VSNFFS Trigger: GGAGAAGAAGTTCGAGACTCAGAAATACCTCTCCCC...AGTTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR TCA 90 bp | CCGTATGTTAAACCAAAGTTAAGGTCTCAACGCAATGCATGTTTGTTAATTAGCAGAGGCTGGGGAGGGTaGACACTGCGAACGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: PYVKPKLRSQRNACLLISRGWGG*TLRTIQ Trigger: TTGGATCGTTCGCAGTGTTCACCCTCCCCAGCCTCT...GCTAATTAACAAACATGCATTGCGTTGAGACCTTAACTTTGGTTTAACATACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CCA 90 bp | AAACTCTACAAGAATTGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCCAGCTCGACGGTCTaGTCGTTGGAGAACCTCACT | + |
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Preference number: 4 (lower is better) Translates to: KLYKNCYLSLSLSLSLSFSSSTV*SLENLT Trigger: AGTGAGGTTCTCCAACGACCAGACCGTCGAGCTGGA...GAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAATTCTTGTAGAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| 3UTR CAA 72 bp | GCCAGTGCACCAAACATTTTCAAAACTCTACAAGAATaGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ASAPNIFKTLQE*LSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAATTCTTGTAGAGTTTTGAAAATGTTTGGTGCACTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACTACGCATCCTTTTTGTTaGTTTGAGGATTCTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: PGSEALAEQNKIFRILSTTHPFC*FEDSPV Trigger: AACAGGAGAATCCTCAAAGCAACAAAAAGGATGCGT...AGTTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CCA 90 bp | TTCAAAACTCTACAAGAATTGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTATTCTGTTCACTaGGCAAGTCTTGACCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FKTLQELLSLSLSLSLSLLYSVH*ASLDPA Trigger: AGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAATTCTTGTAGAGTTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR TCA 90 bp | ACAAGAATTGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTTCCTTTTTGTTGCTTTaGGGATTCTCCTGTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: TRIVISLSLSLSLSLSLSSFLLL*GFSCFS Trigger: ACTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGA...AGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAATTCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR TCA 90 bp | GGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACTATCTTCCTTTTTGTTGCTTTaGGGATTCTCCTGTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GQRHWLSKTRFLESYQLSSFLLL*GFSCFS Trigger: ACTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGA...AGATAGTTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR GCA 90 bp | TTCAAAACTCTACAAGAATTGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACGCATCCTTTTTGTTaGTTTGAGGATTCTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: FKTLQELLSLSLSLSLSLTHPFC*FEDSPV Trigger: AACAGGAGAATCCTCAAAGCAACAAAAAGGATGCGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAATTCTTGTAGAGTTTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS TCA 90 bp | ACCTCCTGGTCGGAATCCTCTGAGATCTCCGAGTCGGGGTCTTCCTaGGAGGCTGGGGAGGGTGAACACTGCGAACGATCCAAAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: TSWSESSEISESGSS*EAGEGEHCERSKEA Trigger: TGCCTCTTTGGATCGTTCGCAGTGTTCACCCTCCCCAGCCTCTCAGGAAGACCCCGACTCGGAGATCTCAGAGGATTCCGACCAGGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS TCA 90 bp | AACTTCTTCTCCAGCTCGACGGTCTGGTCGTTGGAGAACCTCACTTaGCCGCCTTTCCTTTTGTGCAGAGGTCGCTGGAGGAAGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: NFFSSSTVWSLENLT*PPFLLCRGRWRKGL Trigger: GAGCCCCTTCCTCCAGCGACCTCTGCACAAAAGGAAAGGCGGTCAAGTGAGGTTCTCCAACGACCAGACCGTCGAGCTGGAGAAGAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CAA 90 bp | TGCACCTCTAAAGTCGAGGGAATAGCTACAGACTTAGGAAAGTCAGTCAAGATCCTCCAGAGCAAGGGCTaGCCCAGGGGGTCGTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: CTSKVEGIATDLGKSVKILQSKG*PRGSWR Trigger: CCGCCACGACCCCCTGGGCAAGCCCTTGCTCTGGAG...GATCTTGACTGACTTTCCTAAGTCTGTAGCTATTCCCTCGACTTTAGAGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CAA 90 bp | CCAGGGTCAGAGGCACTGGCTGAGCAAAACAAGATTTTTAGAATCTTATCAACTCTGGTGAAGGAGGAGTaGGGGGACGGCAGCGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: PGSEALAEQNKIFRILSTLVKEE*GDGSVG Trigger: TCCCACGCTGCCGTCCCCCAACTCCTCCTTCACCAG...AGTTGATAAGATTCTAAAAATCTTGTTTTGCTCAGCCAGTGCCTCTGACCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS-3UTR CAA 90 bp | TTCCATGGATTCCCCAAATGTTGCCCCCACCTAAGTGCACCTCTAAAGTCGAGGTTCACTGGGCAAGTCTaGACCCTGCTCACAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: FHGFPKCCPHLSAPLKSRFTGQV*TLLTGS Trigger: ACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAA...CCTCGACTTTAGAGGTGCACTTAGGTGGGGGCAACATTTGGGGAATCCATGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS CCA 90 bp | GTGAACACTGCGAACGATCCAAAGAGGCACCTTTATTCTGTTCACTaGGCAAGTCTTGACCCTGCTCACAGGAAGTGTCCAAACTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: VNTANDPKRHLYSVH*ASLDPAHRKCPNCP Trigger: TGGACAGTTTGGACACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAGGTGCCTCTTTGGATCGTTCGCAGTGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CAA 90 bp | CCTTTCAAAGTGTTCCATGGATTCCCCAAATGTTGCCCCCACCTAAGTGCACCTGTTGGAGAACCTCACTaGACCGCCTTTCCTTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: PFKVFHGFPKCCPHLSAPVGEPH*TAFPFV Trigger: CACAAAAGGAAAGGCGGTCAAGTGAGGTTCTCCAAC...AGGTGCACTTAGGTGGGGGCAACATTTGGGGAATCCATGGAACACTTTGAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS TCA 90 bp | GAACGATCCAAAGAGGCACCTTTATTCTGTTCACTGGGCAAGTCTTaGCCCTGCTCACAGGAAGTGTCCAAACTGTCCAACGCATCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ERSKEAPLFCSLGKS*PCSQEVSKLSNASF Trigger: AAAGGATGCGTTGGACAGTTTGGACACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAGGTGCCTCTTTGGATCGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CAA 90 bp | TGCACCTCTAAAGTCGAGGGAATAGCTACAGACTTAGGAAAGTCAGTCAAGATCCTGAGCTGTAACATCTaGGCCAGACGCTTTCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: CTSKVEGIATDLGKSVKILSCNI*ARRFLS Trigger: CGAGAGAAAGCGTCTGGCCAAGATGTTACAGCTCAG...GATCTTGACTGACTTTCCTAAGTCTGTAGCTATTCCCTCGACTTTAGAGGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS TCA 90 bp | TCACAGGAAGTGTCCAAACTGTCCAACGCATCCTTTTTGTTGCTTTaGGGATTCTCCTGTTTCAGTCTTCTCCATTTAGCTCGGCGATTC | + |
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Preference number: 5 (lower is better) Translates to: SQEVSKLSNASFLLL*GFSCFSLLHLARRF Trigger: GAATCGCCGAGCTAAATGGAGAAGACTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGATGCGTTGGACAGTTTGGACACTTCCTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CAA 90 bp | TTCAAAACTCTACAAGAATTGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCACTGGGCAAGTCTaGACCCTGCTCACAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: FKTLQELLSLSLSLSLSLFTGQV*TLLTGS Trigger: ACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAATTCTTGTAGAGTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS-3UTR CAA 90 bp | TGCACCTCTAAAGTCGAGGGAATAGCTACAGACTTAGGAAAGTCAGTCAAGATCATCCTTTTTGTTGCTTaGAGGATTCTCCTGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: CTSKVEGIATDLGKSVKIILFVA*RILLFQ Trigger: CTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGAT...GATCTTGACTGACTTTCCTAAGTCTGTAGCTATTCCCTCGACTTTAGAGGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS CCA 72 bp | AGAAGGGCGTCGGGTGAGCGGGCTGCAGCAGCGGCGTaGGCGCATACAGCGGGACTCCCACGGCGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RRASGERAAAAA*AHTAGLPRRAQ Trigger: CTGCGCCCGCCGTGGGAGTCCCGCTGTATGCGCCCACGCCGCTGCTGCAGCCCGCTCACCCGACGCCCTTCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS CCA 72 bp | CGGCCGGGTGGTGCGAGAAGGCGGGGTGGACCGGCGTaGGCTCGTACACCGGGGTCCGGTAGGAGGACACGA | + |
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Preference number: 6 (lower is better) Translates to: RPGGARRRGGPA*ARTPGSGRRTR Trigger: TCGTGTCCTCCTACCGGACCCCGGTGTACGAGCCCACGCCGGTCCACCCCGCCTTCTCGCACCACCCGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS CAA 72 bp | AGAGGTCGCTGGAGGAAGGGGCTCCAGAGCAAGGGCTaGCCCAGGGGGTCGTGGCGGAGTAGGGCGTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: RGRWRKGLQSKG*PRGSWRSRACV Trigger: CACGCACGCCCTACTCCGCCACGACCCCCTGGGCAAGCCCTTGCTCTGGAGCCCCTTCCTCCAGCGACCTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS TCA 72 bp | CGTACACCGGGGTCCGGTAGGAGGACACGAGGCTGGTaGAGGAGGAGTTGGGGGACGGCAGCGTGGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RTPGSGRRTRGW*RRSWGTAAWEW Trigger: CCACTCCCACGCTGCCGTCCCCCAACTCCTCCTTCACCAGCCTCGTGTCCTCCTACCGGACCCCGGTGTACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS TCA 72 bp | TCGGAATCCTCTGAGATCTCCGAGTCGGGGTCTTCCTaGGAGGCTGGGGAGGGTGAACACTGCGAACGATCC | + |
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Preference number: 6 (lower is better) Translates to: SESSEISESGSS*EAGEGEHCERS Trigger: GGATCGTTCGCAGTGTTCACCCTCCCCAGCCTCTCAGGAAGACCCCGACTCGGAGATCTCAGAGGATTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS TCA 72 bp | TCCAGCTCGACGGTCTGGTCGTTGGAGAACCTCACTTaGCCGCCTTTCCTTTTGTGCAGAGGTCGCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSTVWSLENLT*PPFLLCRGRWR Trigger: CCTCCAGCGACCTCTGCACAAAAGGAAAGGCGGTCAAGTGAGGTTCTCCAACGACCAGACCGTCGAGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS CAA 72 bp | CTCCAGCTCGACGGTCTGGTCGTTGGAGAACCTCACTaGACCGCCTTTCCTTTTGTGCAGAGGTCGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LQLDGLVVGEPH*TAFPFVQRSLE Trigger: CTCCAGCGACCTCTGCACAAAAGGAAAGGCGGTCAAGTGAGGTTCTCCAACGACCAGACCGTCGAGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS CAA 72 bp | CAGGTTTTGACCTGTCTCTCACTGAGCTGTAACATCTaGGCCAGACGCTTTCTCTCGGGTGGGGAGAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: QVLTCLSLSCNI*ARRFLSGGERY Trigger: ATACCTCTCCCCACCCGAGAGAAAGCGTCTGGCCAAGATGTTACAGCTCAGTGAGAGACAGGTCAAAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025944.9 |
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| CDS CCA 72 bp | GCGAACGATCCAAAGAGGCACCTTTATTCTGTTCACTaGGCAAGTCTTGACCCTGCTCACAGGAAGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ANDPKRHLYSVH*ASLDPAHRKCP Trigger: TGGACACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAGGTGCCTCTTTGGATCGTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS CAA 90 bp | CGAACGATCCAAAGAGGCACCTTTATTCTGTTCACTGGGCAAGTCTaGACCCTGCTCACAGGAAGTGTCCAAACTGTCCAACGCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: RTIQRGTFILFTGQV*TLLTGSVQTVQRIL Trigger: AAGGATGCGTTGGACAGTTTGGACACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAGGTGCCTCTTTGGATCGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS TCA 72 bp | AAAGAGGCACCTTTATTCTGTTCACTGGGCAAGTCTTaGCCCTGCTCACAGGAAGTGTCCAAACTGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: KEAPLFCSLGKS*PCSQEVSKLSN Trigger: GTTGGACAGTTTGGACACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAGGTGCCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS CAA 72 bp | CAAAGAGGCACCTTTATTCTGTTCACTGGGCAAGTCTaGACCCTGCTCACAGGAAGTGTCCAAACTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: QRGTFILFTGQV*TLLTGSVQTVQ Trigger: TTGGACAGTTTGGACACTTCCTGTGAGCAGGGTCAAGACTTGCCCAGTGAACAGAATAAAGGTGCCTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS CAA 90 bp | CTCACAGGAAGTGTCCAAACTGTCCAACGCATCCTTTTTGTTGCTTaGAGGATTCTCCTGTTTCAGTCTTCTCCATTTAGCTCGGCGATT | + |
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Preference number: 6 (lower is better) Translates to: LTGSVQTVQRILFVA*RILLFQSSPFSSAI Trigger: AATCGCCGAGCTAAATGGAGAAGACTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGATGCGTTGGACAGTTTGGACACTTCCTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS TCA 72 bp | GTGTCCAAACTGTCCAACGCATCCTTTTTGTTGCTTTaGGGATTCTCCTGTTTCAGTCTTCTCCATTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: VSKLSNASFLLL*GFSCFSLLHLA Trigger: AGCTAAATGGAGAAGACTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGATGCGTTGGACAGTTTGGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS GCA 72 bp | AGGAAGTGTCCAAACTGTCCAACGCATCCTTTTTGTTaGTTTGAGGATTCTCCTGTTTCAGTCTTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: RKCPNCPTHPFC*FEDSPVSVFSI Trigger: AATGGAGAAGACTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGATGCGTTGGACAGTTTGGACACTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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| CDS CAA 72 bp | AGTGTCCAAACTGTCCAACGCATCCTTTTTGTTGCTTaGAGGATTCTCCTGTTTCAGTCTTCTCCATTTAGC | + |
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Preference number: 6 (lower is better) Translates to: SVQTVQRILFVA*RILLFQSSPFS Trigger: GCTAAATGGAGAAGACTGAAACAGGAGAATCCTCAAAGCAACAAAAAGGATGCGTTGGACAGTTTGGACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025944.9 ENSMUST00000128184.3 |
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