Pregenerated sensors for HHATL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032523Ensembl transcript IDs: ENSMUST00000035110.11, ENSMUST00000163981.3, ENSMUST00000214768.2, ENSMUST00000215477.2, ENSMUST00000215910.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGCCGGGCCTCTATCTGTaGCAGTGGCCCACGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLPGLYL*QWPTLC Trigger: GCAGAGCGTGGGCCACTGGCACAGATAGAGGCCCGG...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGGGCTCCTGGCTCACCTaGGCATGGAAGCGGTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLGSWLT*AWKRSK Trigger: CTTCGACCGCTTCCATGCTCAGGTGAGCCAGGAGCC...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTATCCAGGAGCGGAGCTaGGGGGCCACCATCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPIQERS*GATIVQ Trigger: CTGCACGATGGTGGCCCCCCAGCTCCGCTCCTGGAT...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR GCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGGAACGTGGCCACAGATaGGGCCAGCTCTGGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLERGHR*GQLWDH Trigger: GTGATCCCAGAGCTGGCCGCATCTGTGGCCACGTTC...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR GCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGCTGCTCCTCCTCCAGTaGCAGGGATCTCTCACGCTC | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLLLLLQ*QGSLTL Trigger: GAGCGTGAGAGATCCCTGGCACTGGAGGAGGAGCAG...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR GCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTTCTCTGTCCTGCCGCTaGTCCTCCTCCAGTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPSLSCR*SSSSAR Trigger: CCTGGCACTGGAGGAGGAGCAGCGGCAGGACAGAGA...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGAGGCACAGCCAACGCTaGCCCAAGAGTGAGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLRHSQR*PKSEAT Trigger: TGTGGCCTCACTCTTGGGCCAGCGTTGGCTGTGCCT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTACCGCTCAGCACCAGTaGATAGAGGCCGAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPTAQHQ*IEAELS Trigger: GCTGAGCTCGGCCTCTATTCACTGGTGCTGAGCGGT...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGACGCTGGCCCAAGAGTaGGGCCACATAGAGGACCAT | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLTLAQE*GHIEDH Trigger: ATGGTCCTCTATGTGGCCTCACTCTTGGGCCAGCGT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGTTCCAGGGTCAACCTTaGAGGACGCCAAGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLFQGQP*RTPSWP Trigger: TGGCCAGCTTGGCGTCCTTCAAGGTTGACCCTGGAA...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGGGCGTGCCACAGTGTTaGCAACACCAAACAGGACCG | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLGVPQC*QHQTGP Trigger: CGGTCCTGTTTGGTGTTGTCAACACTGTGGCACGCC...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR GCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTACCATGGGCCCATTGTaGCCACCACAGCCAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPTMGPL*PPQPGL Trigger: GAGTCCTGGCTGTGGTGGGCACAATGGGCCCATGGT...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR GCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTCAGTGGCCCACGCTCTaGCAGCTTCTGTACCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPQWPTL*QLLYPE Trigger: CTCTGGGTACAGAAGCTGGCAGAGCGTGGGCCACTG...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTCGGAAGGCCTTCCTGTaGGCCCCATCTTGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPRKAFL*APSCDA Trigger: GGCATCACAAGATGGGGCCCACAGGAAGGCCTTCCG...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGGCTCTGGGATCACGGTaGAGTGATCCCCGCCAATGT | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLALGSR*SDPRQC Trigger: ACATTGGCGGGGATCACTCCACCGTGATCCCAGAGC...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGCTCTATCTGTGCCAGTaGCCCACGCTCTGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLLYLCQ*PTLCQL Trigger: AAGCTGGCAGAGCGTGGGCCACTGGCACAGATAGAG...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGGGACACCACAGTAGGTaGCAAACAAGACCGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLGHHSR*QTRPPV Trigger: CACTGGCGGTCTTGTTTGTCACCTACTGTGGTGTCC...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR GCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTCAGGTGGTCCAGGCGTaGCACAGTGTTGACAACACC | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPQVVQA*HSVDNT Trigger: GGTGTTGTCAACACTGTGGCACGCCTGGACCACCTG...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGACCGCCAGTGTGGTCTaGGGGAAGCCTGTAAGTATC | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLTASVV*GKPVSI Trigger: GATACTTACAGGCTTCCCCCAGACCACACTGGCGGT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGAGCGGTCGAAGGTCATaGTGGGTCCGAAGAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLSGRRS*WVRRRR Trigger: TCTTCTTCTTCGGACCCATCATGACCTTCGACCGCT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGTCATACACCAGGTTTaGGTACGCCAGGCCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPVIHQV*VRQASK Trigger: CTTGCTGGCCTGGCGTACTCAAACCTGGTGTATGAC...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGGGCAACCAGCTCTGTaGATTCAAGGCTGTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPGQPAL*IQGCSG Trigger: GCCTGAACAGCCTTGAATTCACAGAGCTGGTTGCCC...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGCCATCGTGCAGAGTTTaGCAAACAGCACGTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLPSCRV*QTARVQ Trigger: CTGGACACGTGCTGTTTGCCAAACTCTGCACGATGG...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR GCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTACCAAACAGGACCGCTaGCTTCACCCAGTCATACAC | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPTKQDR*LHPVIH Trigger: GTGTATGACTGGGTGAAGGCAGCGGTCCTGTTTGGT...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGATCGCTGGGGATGGTaGGGATGTAGAAGAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPDRWGW*GCRRSE Trigger: TTCACTTCTTCTACATCCTCACCATCCCCAGCGATC...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR TCA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGAGTAGAAATTGTACTTaGGCAGGTCAGCAAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TMVEKSFILLVRLRGLGLSRNCT*AGQQGS Trigger: ACTCCCTTGCTGACCTGCTCAAGTACAATTTCTACT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS TCA 90 bp | CAGGAGACCTCGGCCGGCATAAGCCAGGGCACCGCTCAGCACCAGTaGATAGAGGCCGAGCTCAGCTGCAGGCAGTGCTGTCTTGATGCC | + |
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Preference number: 5 (lower is better) Translates to: QETSAGISQGTAQHQ*IEAELSCRQCCLDA Trigger: GGCATCAAGACAGCACTGCCTGCAGCTGAGCTCGGCCTCTATTCACTGGTGCTGAGCGGTGCCCTGGCTTATGCCGGCCGAGGTCTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 ENSMUST00000214768.2 ENSMUST00000215477.2 ENSMUST00000215910.2 |
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| CDS GCA 90 bp | ACAAGGCCCGAGCCACAGAGTGGTGACGACGAACGTGGCCACAGATaGGGCCAGCTCTGGGATCACGGTGGAGTGATCCCCGCCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: TRPEPQSGDDERGHR*GQLWDHGGVIPANV Trigger: CACATTGGCGGGGATCACTCCACCGTGATCCCAGAGCTGGCCGCATCTGTGGCCACGTTCGTCGTCACCACTCTGTGGCTCGGGCCTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 90 bp | GCTGGCCAGACCAAGGGCAAGGCACAGCCAACGCTGGCCCAAGAGTaGGGCCACATAGAGGACCATACAGTGGCCAAGCAGCAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: AGQTKGKAQPTLAQE*GHIEDHTVAKQQQQ Trigger: CTGCTGCTGCTGCTTGGCCACTGTATGGTCCTCTATGTGGCCTCACTCTTGGGCCAGCGTTGGCTGTGCCTTGCCCTTGGTCTGGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 ENSMUST00000214768.2 |
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| CDS TCA 90 bp | CAGACCACAGGTAGACGATGTCACAAGGCCCGAGCCACAGAGTGGTaGCGACGAACGTGGCCACAGATGCGGCCAGCTCTGGGATCACGG | + |
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Preference number: 5 (lower is better) Translates to: QTTGRRCHKARATEW*RRTWPQMRPALGSR Trigger: CCGTGATCCCAGAGCTGGCCGCATCTGTGGCCACGTTCGTCGTCACCACTCTGTGGCTCGGGCCTTGTGACATCGTCTACCTGTGGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS GCA 90 bp | CAGAAATTTACAGCCCCGCAGAGGGCCCGGACCCTCCGAGACATCTaGTCTGATAGCCGGGCCTCTATCTGTGCCAGTGGCCCACGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QKFTAPQRARTLRDI*SDSRASICASGPRS Trigger: AGAGCGTGGGCCACTGGCACAGATAGAGGCCCGGCTATCAGAGCAGATGTCTCGGAGGGTCCGGGCCCTCTGCGGGGCTGTAAATTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 90 bp | AGAAGAAGTGAAAGAAGACGTCAACAGCCACGATGGCTGCCGCGCTaGGTCCCGCCTGGGCCTGAATGTGCCATAGCTCGCCCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: RRSERRRQQPRWLPR*VPPGPECAIARPLA Trigger: GGCCAGAGGGCGAGCTATGGCACATTCAGGCCCAGGCGGGACTCAGCGCGGCAGCCATCGTGGCTGTTGACGTCTTCTTTCACTTCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 90 bp | GGTGGGCGCAGCTCTCCAGGGCGAAGCTGGTGCACCGCAGAACTGTaGAGCTGCTGCCACCGTGGAACAGTACGTCTTGAAGATCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: GGRSSPGRSWCTAEL*SCCHRGTVRLEDQR Trigger: CCTTTGATCTTCAAGACGTACTGTTCCACGGTGGCAGCAGCTTCACAGTTCTGCGGTGCACCAGCTTCGCCCTGGAGAGCTGCGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 90 bp | TGGGAGGCTGAGGAGGGTCCAGGTGGTCCAGGCGTGCCACAGTGTTaGCAACACCAAACAGGACCGCTGCCTTCACCCAGTCATACACCA | + |
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Preference number: 5 (lower is better) Translates to: WEAEEGPGGPGVPQC*QHQTGPLPSPSHTP Trigger: TGGTGTATGACTGGGTGAAGGCAGCGGTCCTGTTTGGTGTTGTCAACACTGTGGCACGCCTGGACCACCTGGACCCTCCTCAGCCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS GCA 90 bp | CCATACAGTGGCCAAGCAGCAGCAGCAGGTACCATGGGCCCATTGTaGCCACCACAGCCAGGACTCCATATACAGCATACATCCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PYSGQAAAAGTMGPL*PPQPGLHIQHTSRS Trigger: GCTCCTGGATGTATGCTGTATATGGAGTCCTGGCTGTGGTGGGCACAATGGGCCCATGGTACCTGCTGCTGCTGCTTGGCCACTGTATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 ENSMUST00000214768.2 |
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| CDS TCA 90 bp | TGCCTGTTACAAACCCACTCTGCCAAGAGATTCCAGGGTCAACCTTaGAGGACGCCAAGCTGGCCAGACCAAGGGCAAGGCACAGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: CLLQTHSAKRFQGQP*RTPSWPDQGQGTAN Trigger: GTTGGCTGTGCCTTGCCCTTGGTCTGGCCAGCTTGGCGTCCTTCAAGGTTGACCCTGGAATCTCTTGGCAGAGTGGGTTTGTAACAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 90 bp | ACGAACGTGGCCACAGATGCGGCCAGCTCTGGGATCACGGTGGAGTaGTCCCCGCCAATGTGGTCATACACATATTTGCAAAGCCAATCA | + |
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Preference number: 5 (lower is better) Translates to: TNVATDAASSGITVE*SPPMWSYTYLQSQS Trigger: TGATTGGCTTTGCAAATATGTGTATGACCACATTGGCGGGGATCACTCCACCGTGATCCCAGAGCTGGCCGCATCTGTGGCCACGTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS-3UTR CAA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTAGGCGGCTGGCGAACTaGAGATCGCTGGGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPRRLAN*RSLGMV Trigger: CACCATCCCCAGCGATCTCAAGTTCGCCAGCCGCCT...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS TCA 90 bp | CACCGCAGAACTGTGAAGCTGCTGCCACCGTGGAACAGTACGTCTTaGAGATCAAAGGTGCCTGTTACAAACCCACTCTGCCAAGAGATT | + |
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Preference number: 5 (lower is better) Translates to: HRRTVKLLPPWNSTS*RSKVPVTNPLCQEI Trigger: AATCTCTTGGCAGAGTGGGTTTGTAACAGGCACCTTTGATCTTCAAGACGTACTGTTCCACGGTGGCAGCAGCTTCACAGTTCTGCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS-3UTR CAA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGAGGCGTGCCACAGTGTaGACAACACCAAACAGGACC | + |
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Preference number: 5 (lower is better) Translates to: TMVEKSFILLVRLRGLGLRRATV*TTPNRT Trigger: GGTCCTGTTTGGTGTTGTCAACACTGTGGCACGCCT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS TCA 90 bp | GATCCCCGCCAATGTGGTCATACACATATTTGCAAAGCCAATCATTaGTACCACGGTCGAAGTGCGTTTCCCCGAAGACATAGAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: DPRQCGHTHICKANH*YHGRSAFPRRHRAQ Trigger: CTGCGCTCTATGTCTTCGGGGAAACGCACTTCGACCGTGGTATCAATGATTGGCTTTGCAAATATGTGTATGACCACATTGGCGGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS-3UTR CAA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGACCATCGTGCAGAGTTaGGCAAACAGCACGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: TMVEKSFILLVRLRGLGLTIVQS*ANSTCP Trigger: TGGACACGTGCTGTTTGCCAAACTCTGCACGATGGT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CAA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGAGTCATACACCAGGTTaGAGTACGCCAGGCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: TMVEKSFILLVRLRGLGLSHTPG*STPGQQ Trigger: TTGCTGGCCTGGCGTACTCAAACCTGGTGTATGACT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CAA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGACCCAGAGCTCAAAGTaGAGGCCGAAGCAGTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: TMVEKSFILLVRLRGLGLTQSSK*RPKQLR Trigger: TCTTAACTGCTTCGGCCTCAACTTTGAGCTCTGGGT...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CAA 90 bp | ACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTGTTGCAAAGCCAATCATaGATACCACGGTCGAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: TMVEKSFILLVRLRGLGLLQSQS*IPRSKC Trigger: GCACTTCGACCGTGGTATCAATGATTGGCTTTGCAA...CAGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CAA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTTTCAGGCTCACGAGGTaGTACATGATGATAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPFRLTR*YMMIAQ Trigger: CTGGGCTATCATCATGTACAACCTCGTGAGCCTGAA...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS-3UTR CAA 90 bp | TACTATGGTAGAAAAGTCTTTTATTCTATTGGTCAGGCTCCGTGGCCTGGGCCTATGACATTTCGGAAGTaGGTAAACCACATCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: YYGRKVFYSIGQAPWPGPMTFRK*VNHITH Trigger: GTGGGTGATGTGGTTTACCAACTTCCGAAATGTCAT...AGGCCCAGGCCACGGAGCCTGACCAATAGAATAAAAGACTTTTCTACCATAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035110.11 |
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| CDS TCA 72 bp | GCCACGATGGCTGCCGCGCTGAGTCCCGCCTGGGCCTaGATGTGCCATAGCTCGCCCTCTGGCCTCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: ATMAAALSPAWA*MCHSSPSGLTG Trigger: GCCAGTGAGGCCAGAGGGCGAGCTATGGCACATTCAGGCCCAGGCGGGACTCAGCGCGGCAGCCATCGTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS GCA 72 bp | ACAGCCCCGCAGAGGGCCCGGACCCTCCGAGACATCTaGTCTGATAGCCGGGCCTCTATCTGTGCCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TAPQRARTLRDI*SDSRASICASG Trigger: GCCACTGGCACAGATAGAGGCCCGGCTATCAGAGCAGATGTCTCGGAGGGTCCGGGCCCTCTGCGGGGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | TCGGCCGGCATAAGCCAGGGCACCGCTCAGCACCAGTaGATAGAGGCCGAGCTCAGCTGCAGGCAGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SAGISQGTAQHQ*IEAELSCRQCC Trigger: ACAGCACTGCCTGCAGCTGAGCTCGGCCTCTATTCACTGGTGCTGAGCGGTGCCCTGGCTTATGCCGGCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 ENSMUST00000214768.2 ENSMUST00000215477.2 ENSMUST00000215910.2 |
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| CDS TCA 72 bp | GGTAGACGATGTCACAAGGCCCGAGCCACAGAGTGGTaGCGACGAACGTGGCCACAGATGCGGCCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRRCHKARATEW*RRTWPQMRPAL Trigger: CAGAGCTGGCCGCATCTGTGGCCACGTTCGTCGTCACCACTCTGTGGCTCGGGCCTTGTGACATCGTCTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | GAGGAGGGTCCAGGTGGTCCAGGCGTGCCACAGTGTTaGCAACACCAAACAGGACCGCTGCCTTCACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: EEGPGGPGVPQC*QHQTGPLPSPS Trigger: ACTGGGTGAAGGCAGCGGTCCTGTTTGGTGTTGTCAACACTGTGGCACGCCTGGACCACCTGGACCCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | ACCAAGGGCAAGGCACAGCCAACGCTGGCCCAAGAGTaGGGCCACATAGAGGACCATACAGTGGCCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TKGKAQPTLAQE*GHIEDHTVAKQ Trigger: CTGCTTGGCCACTGTATGGTCCTCTATGTGGCCTCACTCTTGGGCCAGCGTTGGCTGTGCCTTGCCCTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 ENSMUST00000214768.2 |
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| CDS TCA 72 bp | CAGGACCGCTGCCTTCACCCAGTCATACACCAGGTTTaGGTACGCCAGGCCAGCAAGAGCACTGTCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QDRCLHPVIHQV*VRQASKSTVWE Trigger: CTCCCAGACAGTGCTCTTGCTGGCCTGGCGTACTCAAACCTGGTGTATGACTGGGTGAAGGCAGCGGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS GCA 72 bp | GAAGAAGTGAAAGAAGACGTCAACAGCCACGATGGCTaGCGCGCTGAGTCCCGCCTGGGCCTGAATGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: EEVKEDVNSHDG*RAESRLGLNVP Trigger: TGGCACATTCAGGCCCAGGCGGGACTCAGCGCGGCAGCCATCGTGGCTGTTGACGTCTTCTTTCACTTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | CAAACCCACTCTGCCAAGAGATTCCAGGGTCAACCTTaGAGGACGCCAAGCTGGCCAGACCAAGGGCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QTHSAKRFQGQP*RTPSWPDQGQG Trigger: GCCTTGCCCTTGGTCTGGCCAGCTTGGCGTCCTTCAAGGTTGACCCTGGAATCTCTTGGCAGAGTGGGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | AGCTCTCCAGGGCGAAGCTGGTGCACCGCAGAACTGTaGAGCTGCTGCCACCGTGGAACAGTACGTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSPGRSWCTAEL*SCCHRGTVRLE Trigger: TTCAAGACGTACTGTTCCACGGTGGCAGCAGCTTCACAGTTCTGCGGTGCACCAGCTTCGCCCTGGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS CAA 72 bp | ACAGGACCGCTGCCTTCACCCAGTCATACACCAGGTTaGAGTACGCCAGGCCAGCAAGAGCACTGTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: TGPLPSPSHTPG*STPGQQEHCLG Trigger: TCCCAGACAGTGCTCTTGCTGGCCTGGCGTACTCAAACCTGGTGTATGACTGGGTGAAGGCAGCGGTCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS CAA 90 bp | GTGCCTGTTACAAACCCACTCTGCCAAGAGATTCCAGGGTCAACCTaGAAGGACGCCAAGCTGGCCAGACCAAGGGCAAGGCACAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: VPVTNPLCQEIPGST*KDAKLARPRARHSQ Trigger: TTGGCTGTGCCTTGCCCTTGGTCTGGCCAGCTTGGCGTCCTTCAAGGTTGACCCTGGAATCTCTTGGCAGAGTGGGTTTGTAACAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | TCTCACGCTCCTTTACCAGCTGGACACCACAGTAGGTaGCAAACAAGACCGCCAGTGTGGTCTGGGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHAPLPAGHHSR*QTRPPVWSGGS Trigger: GCTTCCCCCAGACCACACTGGCGGTCTTGTTTGTCACCTACTGTGGTGTCCAGCTGGTAAAGGAGCGTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS CCA 72 bp | ACGTGGCCACAGATGCGGCCAGCTCTGGGATCACGGTaGAGTGATCCCCGCCAATGTGGTCATACACATATT | + |
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Preference number: 6 (lower is better) Translates to: TWPQMRPALGSR*SDPRQCGHTHI Trigger: AATATGTGTATGACCACATTGGCGGGGATCACTCCACCGTGATCCCAGAGCTGGCCGCATCTGTGGCCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | GCCACAGATGCGGCCAGCTCTGGGATCACGGTGGAGTaGTCCCCGCCAATGTGGTCATACACATATTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: ATDAASSGITVE*SPPMWSYTYLQ Trigger: TTGCAAATATGTGTATGACCACATTGGCGGGGATCACTCCACCGTGATCCCAGAGCTGGCCGCATCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS CAA 90 bp | CGGGCAACCAGCTCTGTGAATTCAAGGCTGTTCAGGCTCACGAGGTaGTACATGATGATAGCCCAGAAATTTACAGCCCCGCAGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RATSSVNSRLFRLTR*YMMIAQKFTAPQRA Trigger: GGCCCTCTGCGGGGCTGTAAATTTCTGGGCTATCATCATGTACAACCTCGTGAGCCTGAACAGCCTTGAATTCACAGAGCTGGTTGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | CCTGGCTCACCTGAGCATGGAAGCGGTCGAAGGTCATaGTGGGTCCGAAGAAGAAGAAGGGCAAGTAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: PGSPEHGSGRRS*WVRRRRRASRN Trigger: ATTTCTACTTGCCCTTCTTCTTCTTCGGACCCATCATGACCTTCGACCGCTTCCATGCTCAGGTGAGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | ACTGTGAAGCTGCTGCCACCGTGGAACAGTACGTCTTaGAGATCAAAGGTGCCTGTTACAAACCCACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TVKLLPPWNSTS*RSKVPVTNPLC Trigger: GCAGAGTGGGTTTGTAACAGGCACCTTTGATCTTCAAGACGTACTGTTCCACGGTGGCAGCAGCTTCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS CAA 72 bp | AACTGTGAAGCTGCTGCCACCGTGGAACAGTACGTCTaGAAGATCAAAGGTGCCTGTTACAAACCCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: NCEAAATVEQYV*KIKGACYKPTL Trigger: CAGAGTGGGTTTGTAACAGGCACCTTTGATCTTCAAGACGTACTGTTCCACGGTGGCAGCAGCTTCACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS CAA 90 bp | AACAGCACGTGTCCAGAGAGGGCAAAGACAATGACATTTCGGAAGTaGGTAAACCACATCACCCACTCGAAGTCAGCCACATCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: NSTCPERAKTMTFRK*VNHITHSKSATSIF Trigger: GAAGATGGATGTGGCTGACTTCGAGTGGGTGATGTGGTTTACCAACTTCCGAAATGTCATTGTCTTTGCCCTCTCTGGACACGTGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 ENSMUST00000214768.2 |
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| CDS CAA 72 bp | TGTCCAGAGAGGGCAAAGACAATGACATTTCGGAAGTaGGTAAACCACATCACCCACTCGAAGTCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: CPERAKTMTFRK*VNHITHSKSAT Trigger: TGTGGCTGACTTCGAGTGGGTGATGTGGTTTACCAACTTCCGAAATGTCATTGTCTTTGCCCTCTCTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 ENSMUST00000214768.2 |
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| CDS CAA 72 bp | AGCTCTGTGAATTCAAGGCTGTTCAGGCTCACGAGGTaGTACATGATGATAGCCCAGAAATTTACAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: SSVNSRLFRLTR*YMMIAQKFTAP Trigger: CGGGGCTGTAAATTTCTGGGCTATCATCATGTACAACCTCGTGAGCCTGAACAGCCTTGAATTCACAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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| CDS TCA 72 bp | CAATGTGGTCATACACATATTTGCAAAGCCAATCATTaGTACCACGGTCGAAGTGCGTTTCCCCGAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: QCGHTHICKANH*YHGRSAFPRRH Trigger: ATGTCTTCGGGGAAACGCACTTCGACCGTGGTATCAATGATTGGCTTTGCAAATATGTGTATGACCACATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035110.11 ENSMUST00000163981.3 |
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